Identified Basepairs and Their Conformations and Conformational Parameters
RNA |
PDB |
Position |
bp |
bpC; LG [LW][Sanger] |
dCC |
<X ; <Y |
|<X - <Y| |
Torsion |
Z-Diff |
Buckle |
PDB Id: 3ID5
BPC Identified: 18
Ambiguities: 0
gRNA |
3ID5 |
11!D:31!D |
C:G |
Wb [---][-] |
9.94 |
69.06; 49.77 |
19.29 |
-0.69 |
0.51 |
11.92 |
gRNA |
3ID5 |
12!D:30!D |
U:U |
Wb [cWW][XVI] |
9.13 |
68.44; 41.39 |
27.05 |
1.89 |
0.33 |
3.52 |
gRNA |
3ID5 |
13!D:29!D |
G:A |
S [tSH][XI] |
9.23 |
101.96; 16.83 |
85.12 |
-40.38 |
0.32 |
31.81 |
gRNA |
3ID5 |
14!D:28!D |
A:G |
S [tSH][XI] |
9.57 |
7.9; 97.6 |
89.69 |
-22.23 |
1.31 |
42.33 |
gRNA |
3ID5 |
15!D:24!D |
G:C |
WC [cWW][XIX] |
10.88 |
59.16; 53.97 |
5.19 |
9.21 |
0.12 |
10.2 |
gRNA |
3ID5 |
16!D:23!D |
C:G |
WC [cWW][XIX] |
10.98 |
59.82; 48.74 |
11.08 |
-11.05 |
0.71 |
23.36 |
gRNA |
3ID5 |
17!D:22!D |
G:C |
WC [cWW][XIX] |
11.18 |
49.93; 58.1 |
8.17 |
10.56 |
0.32 |
17.05 |
gRNA |
3ID5 |
18!D:21!D |
U:G |
fS_2 [---][-] |
10.37 |
100.51; 31.08 |
69.44 |
178.68 |
0.26 |
9.21 |
gRNA |
3ID5 |
25!D:26!D |
U:G |
rS [tSS][-] |
8.49 |
99.52; 88.72 |
10.79 |
-64.33 |
0.09 |
56.2 |
gRNA |
3ID5 |
11!H:31!H |
C:G |
Wb [---][-] |
9.94 |
69.08; 49.73 |
19.35 |
-0.57 |
0.52 |
11.77 |
gRNA |
3ID5 |
12!H:30!H |
U:U |
Wb [cWW][XVI] |
9.13 |
68.38; 41.42 |
26.97 |
1.93 |
0.32 |
3.24 |
gRNA |
3ID5 |
13!H:29!H |
G:A |
S [tSH][XI] |
9.23 |
101.85; 16.92 |
84.92 |
-40.06 |
0.31 |
31.98 |
gRNA |
3ID5 |
14!H:28!H |
A:G |
S [tSH][XI] |
9.57 |
7.78; 97.69 |
89.91 |
-21.4 |
1.34 |
42.51 |
gRNA |
3ID5 |
15!H:24!H |
G:C |
WC [cWW][XIX] |
10.88 |
59.16; 53.96 |
5.2 |
9.25 |
0.09 |
10.43 |
gRNA |
3ID5 |
16!H:23!H |
C:G |
WC [cWW][XIX] |
10.98 |
60.06; 48.93 |
11.13 |
-11.19 |
0.72 |
23.58 |
gRNA |
3ID5 |
17!H:22!H |
G:C |
WC [cWW][XIX] |
11.17 |
49.86; 58.11 |
8.25 |
10.74 |
0.33 |
17.18 |
gRNA |
3ID5 |
18!H:21!H |
U:G |
fS_2 [---][-] |
10.38 |
100.54; 31.1 |
69.45 |
178.7 |
0.25 |
9.51 |
gRNA |
3ID5 |
25!H:26!H |
U:G |
rS [tSS][-] |
8.48 |
99.69; 88.55 |
11.13 |
-64.62 |
0.11 |
55.96 |