Identified Basepairs and Their Conformations and Conformational Parameters

PDB Id: 3IQN BPC Identified: 48 Ambiguities: 0
RNA PDB Position bp bpC; LG [LW][Sanger] dCC <X ; <Y |<X - <Y| Torsion Z-Diff Buckle
Riboswitch 3IQN 1!A:93!A G:C WC [cWW][XIX] 10.86 51.58; 54.86 3.28 0.29 0.09 5.17
Riboswitch 3IQN 2!A:92!A G:C WC [cWW][XIX] 10.55 55.43; 57.29 1.86 -9.53 0.15 14.23
Riboswitch 3IQN 3!A:91!A C:G WC [cWW][XIX] 10.5 54.79; 55.54 0.75 -6.13 0.02 12.3
Riboswitch 3IQN 4!A:90!A U:A WC [cWW][XX] 10.79 53.18; 54.87 1.69 -9.44 0.29 19.6
Riboswitch 3IQN 5!A:89!A U:G Wb [cWW][XXVIII] 10.24 72.21; 47.63 24.58 -9.6 0.26 11.92
Riboswitch 3IQN 6!A:88!A A:U WC [cWW][XX] 10.21 57.13; 58.11 0.98 -10.95 0.12 16.55
Riboswitch 3IQN 7!A:87!A U:A WC [cWW][XX] 10.32 57.54; 56.12 1.43 -4.12 0.09 4.32
Riboswitch 3IQN 8!A:86!A C:G WC [cWW][XIX] 10.61 55.35; 55.84 0.5 0.82 0.14 9.68
Riboswitch 3IQN 11!A:44!A G:C rpS [cSS][-] 5.76 101.72; 151.64 49.92 -69.18 0.41 33.35
Riboswitch 3IQN 12!A:43!A A:G rpS [cSS][-] 5.44 150.49; 110.33 40.16 -26.45 0.48 28.29
Riboswitch 3IQN 13!A:41!A G:C WC [cWW][XIX] 10.29 58.18; 61.34 3.16 1.15 0.78 18.11
Riboswitch 3IQN 15!A:40!A G:C WC [cWW][XIX] 10.65 53.02; 55.28 2.27 2.12 0.32 16.31
Riboswitch 3IQN 16!A:39!A G:C WC [cWW][XIX] 10.71 50.74; 55.96 5.22 4.26 0.46 21.58
Riboswitch 3IQN 17!A:38!A U:A WC [cWW][XX] 9.8 62.47; 60.38 2.09 1.06 0.15 17.26
Riboswitch 3IQN 18!A:37!A G:A S [tSH][XI] 9.45 98.51; 9.56 88.94 13.94 0.04 6.19
Riboswitch 3IQN 19!A:36!A G:A S [tSH][XI] 8.45 93.93; 7.25 86.68 -123.56 0.1 16.74
Riboswitch 3IQN 20!A:35!A A:G S [tSH][XI] 9.28 13.71; 103.76 90.05 -14.92 0.15 14.84
Riboswitch 3IQN 20!A:32!A A:G rS [tSS][-] 8.64 57.57; 100.03 42.46 128.13 1.09 53.58
Riboswitch 3IQN 21!A:36!A G:A rS(bs:N2-O2*) [---][-] 4.51 102.88; 88.53 14.34 -138.34 2.07 60.92
Riboswitch 3IQN 21!A:31!A G:C WC [cWW][XIX] 10.42 55.27; 58.55 3.28 2.19 0.38 6.24
Riboswitch 3IQN 22!A:30!A G:C WC [cWW][XIX] 10.64 56.26; 53.49 2.77 1.49 0.02 2.55
Riboswitch 3IQN 23!A:62!A G:A fS [tSW][X] 9.38 115.45; 7.89 107.56 148.38 0.36 15.27
Riboswitch 3IQN 23!A:29!A G:C WC [cWW][XIX] 10.65 56.88; 55.22 1.66 5.72 0.12 12.13
Riboswitch 3IQN 24!A:85!A A:A pfS [cSW][-] 9.68 31.31; 112.57 81.26 -47.82 1.88 38.87
Riboswitch 3IQN 25!A:68!A C:G WC [cWW][XIX] 10.44 54.75; 57.42 2.67 -24.77 1.03 38.51
Riboswitch 3IQN 25!A:67!A C:U WC_mo [cWW][XVIII] 11.84 33.3; 41.13 7.83 -3.52 1.71 54.15
Riboswitch 3IQN 26!A:67!A U:U Wb [cWW][XVI] 8.83 45.27; 71.19 25.92 -23.62 0.11 33.83
Riboswitch 3IQN 27!A:66!A G:C WC [cWW][XIX] 10.46 55.22; 56.57 1.35 -7.95 0.05 11.53
Riboswitch 3IQN 28!A:65!A G:C WC [cWW][XIX] 10.81 51.08; 53.28 2.21 -11.24 0.53 19.78
Riboswitch 3IQN 30!A:61!A C:A pfS [cSW][-] 9.8 121.06; 31.17 89.89 -23.35 0.39 17.0
Riboswitch 3IQN 42!A:60!A G:C WC [cWW][XIX] 10.64 53.13; 55.9 2.76 -3.21 0.11 6.73
Riboswitch 3IQN 43!A:59!A G:C WC [cWW][XIX] 10.51 56.89; 57.05 0.15 -12.13 0.25 19.31
Riboswitch 3IQN 44!A:58!A C:G WC [cWW][XIX] 10.88 52.58; 51.09 1.49 -17.74 0.41 23.5
Riboswitch 3IQN 46!A:56!A G:G S_1 [tSH][-] 12.34 90.6; 17.25 73.35 -5.25 0.26 7.34
Riboswitch 3IQN 47!A:56!A C:G WC [cWW][XIX] 10.96 49.02; 48.49 0.52 11.65 0.09 18.81
Riboswitch 3IQN 48!A:55!A C:G WC [cWW][XIX] 10.61 56.35; 54.03 2.32 -1.17 0.33 8.69
Riboswitch 3IQN 49!A:54!A A:U WC [cWW][XX] 10.22 58.17; 59.62 1.45 8.41 0.41 4.68
Riboswitch 3IQN 50!A:53!A G:A S [tSH][XI] 8.86 90.6; 14.47 76.12 -109.38 0.44 19.92
Riboswitch 3IQN 50!A:52!A G:A S(sb:O2*-N7) [---][-] 7.13 83.57; 34.38 49.19 -164.2 2.24 29.28
Riboswitch 3IQN 56!A:90!A G:A rpS*(bp:N2-O1P) [---][-] 12.18 83.63; 102.35 18.72 108.4 0.35 69.86
Riboswitch 3IQN 63!A:66!A U:C pS*(sp:O2*-O1P) [---][-] 9.35 42.2; 99.66 57.46 -166.58 2.09 82.52
Riboswitch 3IQN 64!A:85!A U:A WC [cWW][XX] 10.33 59.74; 56.06 3.68 -5.2 0.07 10.57
Riboswitch 3IQN 69!A:82!A C:G WC [cWW][XIX] 10.77 56.62; 53.49 3.13 3.29 0.25 11.98
Riboswitch 3IQN 70!A:81!A A:U WC [cWW][XX] 10.76 52.14; 54.93 2.79 -7.42 0.7 28.16
Riboswitch 3IQN 72!A:79!A C:G WC [cWW][XIX] 10.07 63.59; 56.37 7.22 0.0 0.54 27.57
Riboswitch 3IQN 73!A:78!A G:C WC [cWW][XIX] 10.74 52.98; 51.42 1.56 7.26 0.06 6.87
Riboswitch 3IQN 74!A:77!A G:A S [tSH][XI] 9.07 96.57; 15.77 80.8 -103.26 0.58 18.72
Riboswitch 3IQN 74!A:76!A G:A S(sb:O2*-N7) [---][-] 7.54 90.91; 33.71 57.2 -162.28 1.31 30.19