Identified Basepairs and Their Conformations and Conformational Parameters

PDB Id: 3IQR BPC Identified: 48 Ambiguities: 1
RNA PDB Position bp bpC; LG [LW][Sanger] dCC <X ; <Y |<X - <Y| Torsion Z-Diff Buckle
Riboswitch 3IQR 1!A:93!A G:C WC [cWW][XIX] 10.79 50.48; 52.58 2.09 -0.43 0.08 3.89
Riboswitch 3IQR 2!A:92!A G:C WC [cWW][XIX] 10.66 52.94; 55.81 2.87 -12.2 0.05 15.78
Riboswitch 3IQR 3!A:91!A C:G WC [cWW][XIX] 10.45 54.58; 56.03 1.45 -8.69 0.52 20.06
Riboswitch 3IQR 4!A:90!A U:A WC [cWW][XX] 10.34 57.2; 58.53 1.34 -11.93 0.59 21.44
Riboswitch 3IQR 5!A:89!A U:G Wb [cWW][XXVIII] 10.08 69.42; 47.67 21.75 -11.64 0.4 10.97
Riboswitch 3IQR 6!A:88!A A:U WC [cWW][XX] 10.2 58.24; 58.18 0.05 -5.88 0.17 13.12
Riboswitch 3IQR 7!A:87!A U:A WC [cWW][XX] 10.45 55.45; 58.57 3.12 -4.2 0.31 11.06
Riboswitch 3IQR 8!A:86!A C:G WC [cWW][XIX] 10.73 54.22; 54.4 0.17 1.38 0.03 4.05
Riboswitch 3IQR 11!A:44!A G:C rpS [cSS][-] 5.63 101.42; 150.83 49.4 -73.31 0.47 36.24
Riboswitch 3IQR 12!A:43!A A:G rpS [cSS][-] 5.41 147.6; 111.6 35.99 -29.08 0.16 30.68
Riboswitch 3IQR 13!A:41!A G:C WC [cWW][XIX] 10.25 63.45; 58.36 5.09 -2.17 0.57 14.16
Riboswitch 3IQR 15!A:40!A G:C WC [cWW][XIX] 10.25 57.28; 60.54 3.26 5.68 0.18 14.62
Riboswitch 3IQR 16!A:39!A G:C WC [cWW][XIX] 10.64 54.67; 56.92 2.26 1.47 0.28 16.19
Riboswitch 3IQR 17!A:38!A U:A WC [cWW][XX] 10.12 60.02; 58.15 1.87 1.26 0.1 11.45
Riboswitch 3IQR 18!A:37!A G:A S [tSH][XI] 9.45 98.84; 12.7 86.15 5.18 0.05 10.25
Riboswitch 3IQR 19!A:36!A G:A S [tSH][XI] 8.65 98.52; 7.88 90.64 -70.43 0.0 22.48
Riboswitch 3IQR 20!A:35!A A:G S [tSH][XI] 9.29 13.55; 102.25 88.7 1.64 0.26 15.26
Riboswitch 3IQR 20!A:32!A* A:G rS [tSS][-]; rS(sb:O2*-N1)_2 [---][-] 8.54 58.22; 101.12 42.89 132.36 1.61 53.16
Riboswitch 3IQR 21!A:31!A G:C WC [cWW][XIX] 10.51 54.53; 57.53 3.01 1.45 0.33 11.5
Riboswitch 3IQR 22!A:30!A G:C WC [cWW][XIX] 10.75 55.88; 51.82 4.06 0.66 0.32 13.1
Riboswitch 3IQR 23!A:62!A G:A fS [tSW][X] 9.48 113.44; 7.95 105.49 157.85 0.42 14.14
Riboswitch 3IQR 23!A:29!A G:C WC [cWW][XIX] 10.69 54.96; 54.22 0.74 8.08 0.25 13.02
Riboswitch 3IQR 24!A:85!A A:A pfS [cSW][-] 9.71 29.07; 112.49 83.42 -53.43 2.14 40.95
Riboswitch 3IQR 25!A:68!A C:G WC [cWW][XIX] 10.41 53.22; 56.84 3.62 -32.66 0.64 43.18
Riboswitch 3IQR 25!A:67!A C:U WC_mo [cWW][XVIII] 11.98 34.23; 43.04 8.82 -4.61 2.08 56.5
Riboswitch 3IQR 26!A:67!A U:U Wb [cWW][XVI] 8.69 45.88; 72.56 26.69 -22.6 0.26 30.91
Riboswitch 3IQR 27!A:66!A G:C WC [cWW][XIX] 10.71 52.34; 54.22 1.89 -10.86 0.01 14.84
Riboswitch 3IQR 28!A:65!A G:C WC [cWW][XIX] 10.74 51.4; 53.87 2.47 -8.32 0.31 22.49
Riboswitch 3IQR 30!A:61!A C:A pfS [cSW][-] 9.65 120.06; 33.09 86.96 -26.37 1.05 19.2
Riboswitch 3IQR 42!A:60!A G:C WC [cWW][XIX] 10.53 54.87; 56.5 1.62 -3.27 0.12 7.44
Riboswitch 3IQR 43!A:59!A G:C WC [cWW][XIX] 10.31 58.6; 58.78 0.18 -12.89 0.23 27.2
Riboswitch 3IQR 44!A:58!A C:G WC [cWW][XIX] 10.83 53.27; 51.18 2.08 -16.33 0.53 25.65
Riboswitch 3IQR 46!A:47!A A:C pS* [cHS][-] 6.55 160.75; 35.68 125.07 3.0 0.97 9.98
Riboswitch 3IQR 47!A:57!A C:U WC [cWW][XVIII] 8.46 54.25; 65.4 11.15 -18.58 2.44 10.05
Riboswitch 3IQR 47!A:56!A C:G WC [cWW][XIX] 11.07 50.38; 48.22 2.16 5.62 0.41 17.03
Riboswitch 3IQR 48!A:55!A C:G WC [cWW][XIX] 10.49 56.56; 55.04 1.52 -3.79 0.11 13.58
Riboswitch 3IQR 49!A:54!A A:U WC [cWW][XX] 10.01 60.34; 62.77 2.44 8.92 0.35 5.75
Riboswitch 3IQR 50!A:53!A G:A S [tSH][XI] 9.42 93.8; 8.12 85.68 -91.95 0.42 21.02
Riboswitch 3IQR 50!A:52!A G:A S(sb:O2*-N7) [---][-] 7.08 84.89; 32.86 52.02 -170.5 2.53 30.0
Riboswitch 3IQR 56!A:90!A G:A rpS*(bp:N2-O1P) [---][-] 12.14 84.48; 100.96 16.48 106.18 0.57 72.63
Riboswitch 3IQR 64!A:85!A U:A WC [cWW][XX] 10.42 57.9; 56.02 1.88 -10.45 0.1 13.48
Riboswitch 3IQR 69!A:82!A C:G WC [cWW][XIX] 10.4 56.5; 56.2 0.29 -4.01 0.21 17.28
Riboswitch 3IQR 70!A:81!A A:U WC [cWW][XX] 10.57 53.66; 57.11 3.45 -11.98 0.32 20.79
Riboswitch 3IQR 71!A:80!A G:U Wb [cWW][XXVIII] 10.04 44.16; 69.79 25.63 -5.52 0.05 4.18
Riboswitch 3IQR 72!A:79!A C:G WC [cWW][XIX] 10.66 53.26; 57.26 4.0 -5.56 0.09 14.1
Riboswitch 3IQR 73!A:78!A G:C WC [cWW][XIX] 10.72 52.43; 56.59 4.16 1.72 0.1 1.8
Riboswitch 3IQR 74!A:77!A G:A S [tSH][XI] 9.24 91.28; 14.15 77.13 -102.61 0.96 14.41
Riboswitch 3IQR 74!A:76!A G:A S(sb:O2*-N7) [---][-] 7.62 83.82; 34.35 49.46 -165.2 2.38 27.67