Identified Basepairs and Their Conformations and Conformational Parameters

PDB Id: 3IRW BPC Identified: 37 Ambiguities: 0
RNA PDB Position bp bpC; LG [LW][Sanger] dCC <X ; <Y |<X - <Y| Torsion Z-Diff Buckle
Riboswitch 3IRW 11!R:97!R C:G WC [cWW][XIX] 11.26 53.5; 54.47 0.97 -10.67 0.15 16.0
Riboswitch 3IRW 12!R:96!R A:U WC [cWW][XX] 10.83 52.09; 54.44 2.35 -4.54 0.1 10.1
Riboswitch 3IRW 13!R:94!R C:G WC [cWW][XIX] 10.82 52.1; 57.83 5.74 -11.76 0.78 26.5
Riboswitch 3IRW 14!R:93!R G:C WC [cWW][XIX] 10.71 52.45; 51.93 0.52 -8.25 0.08 9.23
Riboswitch 3IRW 14!R:16!R G:A pS_2 [cSH][-] 8.17 118.52; 50.93 67.59 -14.83 1.39 54.02
Riboswitch 3IRW 17!R:93!R C:C pfS [cSW][-] 7.97 33.38; 127.6 94.22 -49.78 0.19 61.74
Riboswitch 3IRW 21!R:46!R G:C WC [cWW][XIX] 10.72 51.1; 51.76 0.66 5.52 0.11 4.38
Riboswitch 3IRW 22!R:45!R C:G WC [cWW][XIX] 10.64 52.23; 52.97 0.74 -0.19 0.35 8.76
Riboswitch 3IRW 25!R:42!R A:G S [tSH][XI] 9.8 12.8; 96.84 84.05 -6.74 0.12 6.73
Riboswitch 3IRW 26!R:41!R C:G WC [cWW][XIX] 10.7 54.02; 55.93 1.92 -5.45 0.15 12.08
Riboswitch 3IRW 27!R:40!R C:G WC [cWW][XIX] 10.68 53.55; 56.2 2.65 -3.41 0.14 8.79
Riboswitch 3IRW 28!R:39!R A:U WC [cWW][XX] 10.39 57.83; 57.53 0.3 -9.23 0.16 14.78
Riboswitch 3IRW 29!R:38!R U:G Wb [cWW][XXVIII] 10.45 69.57; 43.27 26.3 -7.57 0.29 11.55
Riboswitch 3IRW 30!R:37!R U:A WC [cWW][XX] 10.49 55.46; 56.52 1.06 -2.21 0.11 3.19
Riboswitch 3IRW 31!R:36!R C:G WC [cWW][XIX] 10.57 56.52; 57.15 0.63 0.74 0.04 4.61
Riboswitch 3IRW 32!R:35!R G:A S [tSH][XI] 9.47 96.7; 16.41 80.29 -105.75 1.08 21.06
Riboswitch 3IRW 32!R:34!R G:A S(sb:O2*-N7) [---][-] 7.42 91.16; 31.28 59.88 -168.45 2.0 32.61
Riboswitch 3IRW 34!R:60!R A:U rpS(sb:O2*-N3) [cSS][-] 5.31 94.75; 149.34 54.59 -60.01 0.51 31.4
Riboswitch 3IRW 35!R:79!R A:G rS [tSS][-] 8.11 62.87; 90.3 27.42 164.58 0.52 17.08
Riboswitch 3IRW 35!R:59!R A:C rpS(bs:O2-O2*) [cSS][-] 5.92 150.47; 101.32 49.15 -54.61 0.79 20.03
Riboswitch 3IRW 44!R:83!R C:G WC [cWW][XIX] 10.62 54.3; 50.34 3.96 -8.23 0.38 7.73
Riboswitch 3IRW 45!R:49!R G:A rS [tSS][-] 8.5 88.58; 55.51 33.06 158.34 0.99 32.92
Riboswitch 3IRW 48!R:90!R A:U rH_1 [tWH][XXIV] 9.8 18.57; 36.97 18.4 145.38 0.09 13.52
Riboswitch 3IRW 50!R:89!R G:U Wb [cWW][XXVIII] 10.52 38.15; 67.63 29.48 -6.32 0.11 12.35
Riboswitch 3IRW 51!R:88!R C:G WC [cWW][XIX] 10.37 61.19; 54.12 7.07 -9.0 0.2 16.66
Riboswitch 3IRW 52!R:87!R C:G WC [cWW][XIX] 10.56 56.06; 51.35 4.71 -7.54 0.08 9.82
Riboswitch 3IRW 53!R:55!R U:C pS [cSH][-] 9.34 105.51; 30.53 74.99 -12.17 0.19 12.34
Riboswitch 3IRW 54!R:86!R C:G WC [cWW][XIX] 10.8 49.79; 56.55 6.76 -2.23 0.28 20.78
Riboswitch 3IRW 54!R:82!R C:A rH* [---][-] 13.29 6.32; 47.06 40.74 142.41 0.07 14.36
Riboswitch 3IRW 55!R:85!R C:G WC [cWW][XIX] 10.49 53.09; 52.89 0.2 0.93 0.25 13.59
Riboswitch 3IRW 56!R:84!R G:C WC [cWW][XIX] 10.23 58.92; 61.24 2.32 5.11 0.11 4.82
Riboswitch 3IRW 57!R:81!R G:U Wb [cWW][XXVIII] 10.75 40.28; 61.96 21.68 -8.52 0.12 11.66
Riboswitch 3IRW 58!R:80!R C:G WC [cWW][XIX] 10.42 49.75; 54.55 4.79 -10.02 0.64 22.8
Riboswitch 3IRW 59!R:79!R C:G WC [cWW][XIX] 10.52 52.64; 56.47 3.84 -8.98 0.03 12.38
Riboswitch 3IRW 60!R:78!R U:A WC [cWW][XX] 10.37 56.62; 61.78 5.16 -6.9 0.1 7.55
Riboswitch 3IRW 64!R:76!R C:G WC [cWW][XIX] 10.16 59.13; 55.38 3.75 -15.13 0.61 24.26
Riboswitch 3IRW 65!R:75!R C:G WC_Mo [cWW][XIX] 10.38 65.39; 60.81 4.58 4.83 0.17 4.91