Identified Basepairs and Their Conformations and Conformational Parameters

PDB Id: 3IWN BPC Identified: 75 Ambiguities: 1
RNA PDB Position bp bpC; LG [LW][Sanger] dCC <X ; <Y |<X - <Y| Torsion Z-Diff Buckle
Riboswitch 3IWN 1!A:92!A C:G Wb [---][-] 11.23 48.38; 35.73 12.66 -17.38 0.02 14.21
Riboswitch 3IWN 2!A:91!A A:U Wb* [---][-] 10.56 62.94; 49.37 13.57 -7.68 0.54 16.83
Riboswitch 3IWN 3!A:89!A C:G Wb* [---][-] 10.52 50.27; 66.98 16.71 -24.19 0.78 29.9
Riboswitch 3IWN 4!A:88!A G:C WC [cWW][XIX] 10.49 58.52; 49.35 9.18 -23.11 0.48 17.4
Riboswitch 3IWN 11!A:36!A G:C WC [cWW][XIX] 10.61 55.74; 45.76 9.98 8.19 0.55 5.95
Riboswitch 3IWN 12!A:35!A C:G WC [cWW][XIX] 10.65 54.32; 52.89 1.42 -2.1 0.27 8.46
Riboswitch 3IWN 13!A:34!A A:C S* [tHS][-] 9.54 101.4; 13.31 88.09 -112.01 0.38 37.13
Riboswitch 3IWN 15!A:32!A A:G S [tSH][XI] 9.83 5.14; 101.8 96.66 -18.83 0.6 11.51
Riboswitch 3IWN 16!A:31!A C:G WC [cWW][XIX] 10.98 48.59; 45.01 3.59 -11.27 0.27 15.25
Riboswitch 3IWN 17!A:30!A C:G WC [cWW][XIX] 10.26 59.47; 54.68 4.8 -5.92 0.14 19.18
Riboswitch 3IWN 18!A:29!A A:U WC [cWW][XX] 10.47 60.17; 51.47 8.71 0.21 0.17 5.69
Riboswitch 3IWN 19!A:28!A U:G Wb [cWW][XXVIII] 10.65 67.29; 45.91 21.38 -4.9 0.1 12.22
Riboswitch 3IWN 20!A:27!A U:A WC [cWW][XX] 10.39 55.94; 57.21 1.27 -0.01 0.12 1.37
Riboswitch 3IWN 21!A:26!A C:G WC [cWW][XIX] 10.42 57.98; 54.25 3.73 5.58 0.32 12.79
Riboswitch 3IWN 22!A:25!A G:A S_mo [tSH][XI] 9.04 96.32; 17.32 79.0 -113.03 1.16 17.3
Riboswitch 3IWN 22!A:24!A G:A S(sb:O2*-N7) [---][-] 7.04 90.45; 34.61 55.84 -163.89 1.96 33.48
Riboswitch 3IWN 24!A:50!A A:U rpS(sb:O2*-N3) [cSS][-] 5.14 99.37; 147.06 47.69 -57.88 1.01 34.72
Riboswitch 3IWN 25!A:74!A A:G rS [tSS][-] 7.93 70.26; 85.25 14.99 169.17 0.23 14.23
Riboswitch 3IWN 25!A:49!A A:C rpS(bs:O2-O2*) [cSS][-] 5.86 158.55; 105.8 52.75 -60.91 0.97 12.46
Riboswitch 3IWN 26!A:75!A G:G rS(ss:O2*-O2*)_1 [---][-] 5.81 161.57; 163.1 1.54 -83.66 1.36 25.78
Riboswitch 3IWN 34!A:78!A C:G WC [cWW][XIX] 11.15 45.25; 54.78 9.53 -9.09 0.51 10.03
Riboswitch 3IWN 35!A:39!A G:A rS [tSS][-] 8.53 94.97; 47.75 47.22 152.68 1.15 28.63
Riboswitch 3IWN 38!A:85!A A:U rH_1 [tWH][XXIV] 9.91 16.17; 37.58 21.41 -165.75 0.53 5.17
Riboswitch 3IWN 40!A:84!A G:U Wb [cWW][XXVIII] 10.66 28.14; 65.1 36.96 -14.22 0.06 21.44
Riboswitch 3IWN 41!A:83!A C:G WC [cWW][XIX] 10.39 50.8; 59.93 9.13 -10.73 0.0 17.09
Riboswitch 3IWN 42!A:82!A C:G WC [cWW][XIX] 10.58 52.27; 52.76 0.49 -7.3 0.08 13.59
Riboswitch 3IWN 43!A:45!A U:C pS [cSH][-] 9.36 102.42; 26.17 76.25 -27.71 0.94 21.4
Riboswitch 3IWN 43!A:44!A U:C pS [cSH][-] 6.68 141.32; 40.75 100.57 -40.27 1.76 24.23
Riboswitch 3IWN 44!A:81!A C:G WC [cWW][XIX] 10.85 51.14; 50.07 1.07 3.15 0.23 8.43
Riboswitch 3IWN 44!A:77!A C:A rH* [---][-] 12.55 7.21; 53.99 46.78 138.82 0.15 7.46
Riboswitch 3IWN 45!A:80!A C:G WC [cWW][XIX] 10.32 55.79; 57.48 1.69 5.67 0.18 9.54
Riboswitch 3IWN 46!A:79!A G:C WC [cWW][XIX] 10.39 57.23; 57.99 0.76 5.17 0.38 7.66
Riboswitch 3IWN 47!A:76!A G:U Wb [cWW][XXVIII] 10.33 41.79; 63.56 21.77 -1.73 0.21 5.9
Riboswitch 3IWN 48!A:75!A C:G WC [cWW][XIX] 10.39 59.91; 52.61 7.3 -8.73 0.84 21.67
Riboswitch 3IWN 49!A:74!A C:G WC [cWW][XIX] 10.42 57.35; 51.65 5.7 -1.32 0.1 17.07
Riboswitch 3IWN 50!A:73!A U:A WC [cWW][XX] 10.79 49.73; 53.85 4.12 -4.02 0.15 6.56
Riboswitch 3IWN 51!A:72!A A:U Wb* [---][-] 10.73 59.38; 45.67 13.72 0.1 0.01 2.95
Riboswitch 3IWN 54!A:71!A C:G WC [cWW][XIX] 9.99 59.4; 59.59 0.19 -6.46 0.31 9.68
Riboswitch 3IWN 55!A:70!A G:C WC [cWW][XIX] 10.91 56.25; 51.0 5.25 -0.7 0.48 6.57
Riboswitch 3IWN 56!A:69!A G:C WC [cWW][XIX] 10.5 56.8; 58.48 1.68 -0.92 0.41 21.7
Riboswitch 3IWN 57!A:68!A C:G WC [cWW][XIX] 10.81 53.03; 47.1 5.93 -0.71 0.32 9.98
Riboswitch 3IWN 102!B:191!B A:U Wb* [---][-] 10.02 70.68; 47.94 22.75 -6.14 0.1 9.65
Riboswitch 3IWN 103!B:189!B C:G WC [cWW][XIX] 10.29 57.29; 66.24 8.95 -22.44 0.05 23.36
Riboswitch 3IWN 104!B:188!B G:C WC [cWW][XIX] 10.81 50.82; 42.13 8.68 -26.27 0.15 29.91
Riboswitch 3IWN 111!B:136!B G:C WC [cWW][XIX] 10.73 53.56; 49.31 4.25 15.87 0.51 16.92
Riboswitch 3IWN 112!B:135!B C:G WC [cWW][XIX] 10.51 50.44; 57.69 7.25 11.54 0.06 15.29
Riboswitch 3IWN 115!B:132!B A:G S [tSH][XI] 9.97 5.06; 98.06 93.0 -122.43 0.01 20.12
Riboswitch 3IWN 116!B:131!B C:G WC [cWW][XIX] 10.48 57.38; 48.3 9.08 7.13 0.2 16.35
Riboswitch 3IWN 117!B:130!B C:G WC [cWW][XIX] 10.83 53.62; 52.46 1.17 5.6 0.58 32.28
Riboswitch 3IWN 118!B:129!B A:U WC [cWW][XX] 10.36 57.0; 57.0 0.01 -7.39 0.61 19.63
Riboswitch 3IWN 119!B:128!B U:G WC [---][-] 10.59 64.46; 57.01 7.45 0.74 0.09 16.07
Riboswitch 3IWN 120!B:127!B U:A WC [cWW][XX] 10.75 52.42; 54.59 2.17 1.81 0.28 12.71
Riboswitch 3IWN 121!B:126!B C:G WC [cWW][XIX] 10.56 59.29; 64.48 5.2 4.21 0.39 2.53
Riboswitch 3IWN 122!B:125!B* G:A S [tSH][XI]; S(bp:N1-O2P)_1 [---][-] 8.85 93.36; 17.83 75.53 -90.88 1.23 20.2
Riboswitch 3IWN 122!B:124!B G:A S(sb:O2*-N7) [---][-] 6.76 95.7; 36.66 59.04 -152.58 0.23 32.06
Riboswitch 3IWN 124!B:150!B A:U rpS(sb:O2*-N3) [cSS][-] 5.19 105.95; 146.68 40.73 -57.51 0.33 21.64
Riboswitch 3IWN 126!B:175!B G:G rS(ss:O2*-O2*)_1 [---][-] 5.81 160.86; 161.82 0.96 -80.21 1.71 22.13
Riboswitch 3IWN 134!B:178!B C:G Wb* [---][-] 11.2 37.63; 71.47 33.83 -14.81 0.03 26.39
Riboswitch 3IWN 135!B:139!B G:A rS [tSS][-] 8.66 98.62; 42.9 55.71 140.32 1.13 36.11
Riboswitch 3IWN 138!B:185!B A:U rH_1 [tWH][XXIV] 9.96 12.0; 41.5 29.5 -135.41 1.88 4.28
Riboswitch 3IWN 140!B:184!B G:U Wb [cWW][XXVIII] 10.42 40.53; 71.23 30.7 -8.1 0.0 16.42
Riboswitch 3IWN 141!B:183!B C:G WC [cWW][XIX] 10.61 56.56; 56.85 0.29 -6.42 0.71 19.49
Riboswitch 3IWN 142!B:182!B C:G WC [cWW][XIX] 10.61 55.07; 53.38 1.69 -15.91 0.12 25.61
Riboswitch 3IWN 144!B:181!B C:G WC [cWW][XIX] 10.99 46.55; 47.62 1.07 20.0 0.22 25.27
Riboswitch 3IWN 145!B:180!B C:G WC [cWW][XIX] 10.08 55.57; 57.66 2.1 13.63 1.23 3.06
Riboswitch 3IWN 147!B:176!B G:U Wb* [---][-] 10.89 63.37; 38.86 24.52 7.25 0.89 7.66
Riboswitch 3IWN 148!B:175!B C:G WC [cWW][XIX] 10.94 45.15; 57.95 12.79 3.11 0.32 26.11
Riboswitch 3IWN 149!B:174!B C:G WC [cWW][XIX] 10.41 55.67; 55.53 0.14 2.66 0.09 9.27
Riboswitch 3IWN 150!B:173!B U:A WC [cWW][XX] 10.29 52.85; 59.04 6.19 -4.01 0.94 21.08
Riboswitch 3IWN 151!B:172!B A:U Wb* [---][-] 9.91 75.16; 51.18 23.98 14.52 0.9 36.6
Riboswitch 3IWN 152!B:173!B A:A S [tSH][-] 9.96 23.27; 111.18 87.91 3.47 0.18 29.85
Riboswitch 3IWN 154!B:171!B C:G WC [cWW][XIX] 9.94 61.04; 60.64 0.4 -16.48 0.44 47.5
Riboswitch 3IWN 155!B:170!B G:C WC [cWW][XIX] 10.44 58.3; 54.06 4.24 0.96 0.04 18.04
Riboswitch 3IWN 156!B:169!B G:C WC [cWW][XIX] 10.51 54.25; 53.68 0.57 9.27 0.57 35.76
Riboswitch 3IWN 157!B:168!B C:G WC [cWW][XIX] 10.12 57.52; 57.49 0.03 -6.02 0.28 24.57