Identified Basepairs and Their Conformations and Conformational Parameters

PDB Id: 3IZD BPC Identified: 61 Ambiguities: 0
RNA PDB Position bp bpC; LG [LW][Sanger] dCC <X ; <Y |<X - <Y| Torsion Z-Diff Buckle
rRNA 3IZD 1948!A:2098!A G:C WC [cWW][XIX] 10.79 50.69; 63.25 12.55 3.23 0.25 3.4
rRNA 3IZD 1949!A:2097!A G:U WC [---][-] 10.89 47.43; 47.96 0.53 -8.64 0.09 14.81
rRNA 3IZD 1950!A:2096!A U:A WC [cWW][XX] 10.92 52.96; 47.14 5.82 -10.01 0.03 16.44
rRNA 3IZD 1951!A:2095!A C:G WC [cWW][XIX] 10.93 53.17; 49.43 3.74 1.22 0.34 10.68
rRNA 3IZD 1952!A:2094!A G:C WC [cWW][XIX] 10.62 60.75; 53.51 7.24 3.28 0.26 4.15
rRNA 3IZD 1954!A:2087!A G:C WC [cWW][XIX] 10.35 54.02; 54.55 0.53 8.51 0.56 4.22
rRNA 3IZD 1955!A:2086!A U:A WC [cWW][XX] 10.17 62.16; 53.11 9.06 -5.5 0.17 10.57
rRNA 3IZD 1956!A:2085!A A:U WC [cWW][XX] 10.81 51.9; 52.78 0.88 2.16 0.34 7.17
rRNA 3IZD 1957!A:2084!A G:C WC [cWW][XIX] 10.94 51.36; 51.42 0.06 9.62 0.58 13.8
rRNA 3IZD 1958!A:2083!A U:G Wb [cWW][XXVIII] 10.54 62.71; 40.2 22.51 10.1 0.19 8.39
rRNA 3IZD 1959!A:2082!A G:U Wb [cWW][XXVIII] 10.52 40.84; 58.67 17.83 1.73 0.05 5.72
rRNA 3IZD 1960!A:2081!A A:U WC [cWW][XX] 9.9 58.42; 62.18 3.77 -5.57 0.21 6.45
rRNA 3IZD 1963!A:2059!A G:U Wb [cWW][XXVIII] 10.72 41.44; 59.3 17.86 0.62 0.22 7.49
rRNA 3IZD 1964!A:2058!A C:G WC [cWW][XIX] 10.88 52.76; 46.46 6.3 -0.3 0.1 10.14
rRNA 3IZD 1965!A:2057!A C:G WC [cWW][XIX] 10.91 51.92; 48.96 2.96 0.0 0.15 10.99
rRNA 3IZD 1967!A:2055!A U:U Wb_mo [cWW][XVI] 9.72 44.02; 59.99 15.97 -0.28 0.05 9.6
rRNA 3IZD 1968!A:2054!A G:C WC [cWW][XIX] 10.84 50.44; 52.33 1.89 2.33 0.34 7.93
rRNA 3IZD 1969!A:2053!A G:C WC [cWW][XIX] 10.85 48.91; 53.31 4.4 0.3 0.17 10.86
rRNA 3IZD 1970!A:2052!A U:G WC [---][-] 10.76 51.83; 54.54 2.72 2.58 0.34 4.3
rRNA 3IZD 1971!A:2051!A C:G WC [cWW][XIX] 10.92 51.0; 48.99 2.01 2.85 0.17 4.97
rRNA 3IZD 1973!A:2049!A G:A S [tSH][XI] 9.78 90.41; 5.64 84.78 19.69 0.14 3.35
rRNA 3IZD 1974!A:2048!A A:G S [tSH][XI] 9.07 11.26; 95.35 84.09 -17.76 0.3 10.6
rRNA 3IZD 1975!A:2047!A C:A rH_1 [rWH][XXV] 10.67 43.42; 7.11 36.31 6.26 0.19 14.75
rRNA 3IZD 1976!A:2046!A G:U Wb [cWW][XXVIII] 10.45 40.21; 64.02 23.81 8.81 0.26 3.48
rRNA 3IZD 1977!A:2045!A C:G WC [cWW][XIX] 10.66 54.36; 50.4 3.96 5.18 0.06 7.85
rRNA 3IZD 1978!A:2044!A A:U WC [cWW][XX] 10.72 51.57; 53.76 2.19 -3.04 0.01 5.0
rRNA 3IZD 1979!A:2043!A G:U Wb [cWW][XXVIII] 10.07 35.91; 65.65 29.74 6.27 0.55 6.85
rRNA 3IZD 1980!A:2042!A C:G WC [cWW][XIX] 11.17 45.94; 48.11 2.17 10.86 0.1 5.26
rRNA 3IZD 1982!A:2039!A G:C WC [cWW][XIX] 10.98 49.05; 50.18 1.13 6.31 0.28 7.62
rRNA 3IZD 1983!A:2038!A G:C WC [cWW][XIX] 10.74 48.38; 52.92 4.54 6.23 0.09 4.95
rRNA 3IZD 1984!A:2037!A C:G WC [cWW][XIX] 10.81 52.71; 45.23 7.48 5.95 0.36 4.64
rRNA 3IZD 1985!A:2036!A G:U WC [---][-] 10.91 47.7; 50.16 2.46 2.69 0.08 1.88
rRNA 3IZD 1986!A:2035!A U:G WC [---][-] 10.75 50.53; 48.86 1.67 1.59 0.05 2.84
rRNA 3IZD 1987!A:2034!A G:C WC [cWW][XIX] 10.75 45.1; 56.36 11.26 6.86 0.08 7.15
rRNA 3IZD 1988!A:2033!A C:G WC [cWW][XIX] 10.88 49.21; 49.11 0.1 17.2 0.09 13.14
rRNA 3IZD 1990!A:2031!A U:U WC [---][-] 9.47 45.15; 52.26 7.11 -23.21 0.44 29.99
rRNA 3IZD 1991!A:2030!A G:C WC [cWW][XIX] 11.02 46.74; 50.69 3.94 4.55 0.16 1.24
rRNA 3IZD 1992!A:2029!A U:A WC [cWW][XX] 11.09 53.61; 49.03 4.58 0.62 0.01 0.49
rRNA 3IZD 1993!A:2028!A G:U WC [---][-] 10.99 47.19; 51.71 4.52 3.19 0.09 3.46
rRNA 3IZD 1994!A:2027!A G:C WC [cWW][XIX] 10.82 51.31; 51.61 0.3 8.48 0.29 6.49
rRNA 3IZD 1995!A:2026!A A:A S [tSH][-] 9.81 88.59; 11.98 76.61 56.9 1.3 4.47
rRNA 3IZD 1996!A:2025!A C:G WC [cWW][XIX] 10.59 53.47; 53.31 0.16 10.71 0.28 18.41
rRNA 3IZD 1997!A:2024!A U:G WC [---][-] 10.78 50.48; 48.73 1.75 11.86 0.07 17.47
rRNA 3IZD 1998!A:2023!A G:C WC [cWW][XIX] 10.69 47.1; 52.83 5.73 0.35 0.78 3.3
rRNA 3IZD 1999!A:2022!A C:G WC [cWW][XIX] 10.78 52.64; 48.3 4.35 2.83 0.42 4.28
rRNA 3IZD 2000!A:2021!A U:G WC [---][-] 10.93 51.71; 48.15 3.56 7.87 0.02 5.75
rRNA 3IZD 2001!A:2020!A U:A WC [cWW][XX] 10.92 55.27; 47.59 7.69 4.32 0.41 7.09
rRNA 3IZD 2002!A:2019!A G:U WC [---][-] 11.02 45.17; 54.15 8.98 2.75 0.18 6.14
rRNA 3IZD 2003!A:2018!A G:C WC [cWW][XIX] 10.99 49.37; 50.36 0.99 9.19 0.22 2.34
rRNA 3IZD 2004!A:2017!A U:G WC [---][-] 10.95 52.29; 47.88 4.41 5.22 0.17 1.35
rRNA 3IZD 2005!A:2016!A G:U Wb [cWW][XXVIII] 10.63 44.94; 67.35 22.41 -1.92 0.1 6.47
rRNA 3IZD 2006!A:2015!A G:C WC [cWW][XIX] 10.79 48.42; 52.63 4.21 10.99 0.05 7.52
rRNA 3IZD 2007!A:2014!A G:U Wb [cWW][XXVIII] 9.81 40.31; 65.32 25.01 3.32 0.01 1.62
rRNA 3IZD 2008!A:2013!A G:C WC [cWW][XIX] 10.45 49.5; 56.34 6.84 11.32 0.6 2.95
rRNA 3IZD 2009!A:2012!A C:G S [---][-] 9.35 84.32; 16.14 68.18 -121.37 1.68 49.6
rRNA 3IZD 2061!A:2075!A G:C WC [cWW][XIX] 11.2 49.62; 51.45 1.83 -0.32 0.7 16.46
rRNA 3IZD 2062!A:2074!A G:C WC [cWW][XIX] 11.0 54.72; 52.32 2.4 -0.69 0.29 12.42
rRNA 3IZD 2063!A:2073!A U:A WC [cWW][XX] 9.86 68.85; 57.09 11.76 -4.91 0.2 9.42
rRNA 3IZD 2064!A:2072!A C:G WC [cWW][XIX] 10.29 64.06; 52.21 11.85 7.54 0.47 20.39
rRNA 3IZD 2065!A:2071!A U:A sWC [---][-] 10.52 75.22; 29.91 45.31 -30.79 2.54 10.45
rRNA 3IZD 2065!A:2069!A U:G rH_1 [tWH][-] 9.85 32.56; 25.44 7.12 159.85 2.27 11.35