Identified Basepairs and Their Conformations and Conformational Parameters
| RNA |
PDB |
Position |
bp |
bpC; LG [LW][Sanger] |
dCC |
<X ; <Y |
|<X - <Y| |
Torsion |
Z-Diff |
Buckle |
PDB Id: 3JXQ
BPC Identified: 12
Ambiguities: 0
| dsRNA |
3JXQ |
1!A:6!B |
C:G |
WC [cWW][XIX] |
10.47 |
54.26; 58.04 |
3.78 |
-7.07 |
0.08 |
10.47 |
| dsRNA |
3JXQ |
2!A:5!B |
G:C |
WC [cWW][XIX] |
10.57 |
55.76; 56.74 |
0.98 |
-8.17 |
0.19 |
11.48 |
| dsRNA |
3JXQ |
3!A:4!B |
C:G |
WC [cWW][XIX] |
10.84 |
53.48; 49.93 |
3.55 |
-10.52 |
0.06 |
10.02 |
| dsRNA |
3JXQ |
4!A:3!B |
G:C |
WC [cWW][XIX] |
10.61 |
55.29; 56.15 |
0.86 |
-9.43 |
0.01 |
10.56 |
| dsRNA |
3JXQ |
5!A:2!B |
C:G |
WC [cWW][XIX] |
10.67 |
54.44; 52.91 |
1.53 |
-9.44 |
0.08 |
13.54 |
| dsRNA |
3JXQ |
6!A:1!B |
G:C |
WC [cWW][XIX] |
10.65 |
55.47; 55.4 |
0.07 |
-3.66 |
0.12 |
8.56 |
| dsRNA |
3JXQ |
1!K:6!L |
C:G |
WC [cWW][XIX] |
10.62 |
56.33; 53.6 |
2.73 |
-7.61 |
0.3 |
9.94 |
| dsRNA |
3JXQ |
2!K:5!L |
G:C |
WC [cWW][XIX] |
10.5 |
57.77; 55.23 |
2.54 |
-10.57 |
0.05 |
13.54 |
| dsRNA |
3JXQ |
3!K:4!L |
C:G |
WC [cWW][XIX] |
10.52 |
56.97; 55.35 |
1.63 |
-7.62 |
0.02 |
11.24 |
| dsRNA |
3JXQ |
4!K:3!L |
G:C |
WC [cWW][XIX] |
10.6 |
55.48; 57.14 |
1.67 |
-8.71 |
0.16 |
11.5 |
| dsRNA |
3JXQ |
5!K:2!L |
C:G |
WC [cWW][XIX] |
10.69 |
54.97; 54.06 |
0.91 |
-9.9 |
0.1 |
15.09 |
| dsRNA |
3JXQ |
6!K:1!L |
G:C |
WC [cWW][XIX] |
10.64 |
54.5; 55.22 |
0.72 |
-12.3 |
0.1 |
15.89 |