Identified Basepairs and Their Conformations and Conformational Parameters
RNA |
PDB |
Position |
bp |
bpC; LG [LW][Sanger] |
dCC |
<X ; <Y |
|<X - <Y| |
Torsion |
Z-Diff |
Buckle |
PDB Id: 3KS8
BPC Identified: 18
Ambiguities: 0
dsRNA |
3KS8 |
1!E:18!F |
A:U |
WC [cWW][XX] |
10.33 |
58.52; 52.05 |
6.47 |
-6.66 |
0.25 |
12.86 |
dsRNA |
3KS8 |
2!E:17!F |
G:C |
WC [cWW][XIX] |
10.53 |
57.0; 55.91 |
1.08 |
-7.65 |
0.08 |
8.15 |
dsRNA |
3KS8 |
3!E:16!F |
A:U |
WC [cWW][XX] |
10.28 |
59.75; 52.43 |
7.32 |
-8.28 |
0.03 |
9.04 |
dsRNA |
3KS8 |
4!E:15!F |
A:U |
WC [cWW][XX] |
10.51 |
58.31; 50.02 |
8.3 |
-8.26 |
0.12 |
12.35 |
dsRNA |
3KS8 |
5!E:14!F |
G:C |
WC [cWW][XIX] |
10.36 |
58.14; 54.36 |
3.78 |
-9.28 |
0.33 |
16.39 |
dsRNA |
3KS8 |
6!E:13!F |
G:C |
WC [cWW][XIX] |
10.03 |
52.07; 62.51 |
10.43 |
-7.19 |
0.01 |
8.96 |
dsRNA |
3KS8 |
7!E:12!F |
A:U |
WC [cWW][XX] |
10.1 |
52.19; 61.55 |
9.36 |
-8.06 |
0.02 |
14.59 |
dsRNA |
3KS8 |
8!E:11!F |
G:C |
WC [cWW][XIX] |
10.21 |
66.88; 58.69 |
8.19 |
-6.37 |
0.14 |
7.55 |
dsRNA |
3KS8 |
9!E:10!F |
G:C |
WC [cWW][XIX] |
10.21 |
62.42; 59.39 |
3.03 |
-9.49 |
0.11 |
13.06 |
dsRNA |
3KS8 |
10!E:9!F |
G:C |
WC [cWW][XIX] |
10.26 |
62.31; 59.86 |
2.44 |
-9.05 |
0.19 |
14.07 |
dsRNA |
3KS8 |
11!E:8!F |
A:U |
WC [cWW][XX] |
10.08 |
63.1; 52.39 |
10.71 |
-6.23 |
0.18 |
6.69 |
dsRNA |
3KS8 |
12!E:7!F |
G:C |
WC [cWW][XIX] |
10.09 |
53.86; 60.42 |
6.56 |
-6.06 |
0.06 |
11.33 |
dsRNA |
3KS8 |
13!E:6!F |
G:C |
WC [cWW][XIX] |
10.24 |
65.07; 53.34 |
11.73 |
-7.28 |
0.32 |
13.11 |
dsRNA |
3KS8 |
14!E:5!F |
G:C |
WC [cWW][XIX] |
10.3 |
58.18; 57.18 |
1.0 |
-5.23 |
0.49 |
17.42 |
dsRNA |
3KS8 |
15!E:4!F |
A:U |
WC [cWW][XX] |
10.46 |
57.04; 51.98 |
5.05 |
-9.24 |
0.06 |
12.11 |
dsRNA |
3KS8 |
16!E:3!F |
G:C |
WC [cWW][XIX] |
10.52 |
60.66; 52.4 |
8.26 |
-7.79 |
0.28 |
13.23 |
dsRNA |
3KS8 |
17!E:2!F |
G:C |
WC [cWW][XIX] |
10.55 |
59.4; 51.23 |
8.18 |
-7.07 |
0.06 |
10.44 |
dsRNA |
3KS8 |
18!E:1!F |
A:U |
WC [cWW][XX] |
10.36 |
57.64; 50.51 |
7.13 |
-7.95 |
0.02 |
11.87 |