Identified Basepairs and Their Conformations and Conformational Parameters

PDB Id: 3KTV BPC Identified: 91 Ambiguities: 2
RNA PDB Position bp bpC; LG [LW][Sanger] dCC <X ; <Y |<X - <Y| Torsion Z-Diff Buckle
SRP_RNA 3KTV 123!A:227!A C:G WC [cWW][XIX] 10.42 49.18; 52.82 3.65 8.53 1.81 43.23
SRP_RNA 3KTV 125!A:225!A G:C WC [cWW][XIX] 11.17 46.79; 39.75 7.04 4.44 0.81 17.98
SRP_RNA 3KTV 127!A:223!A A:U WC [cWW][XX] 11.48 41.76; 49.92 8.15 -6.19 0.46 13.2
SRP_RNA 3KTV 129!A:168!A C:G WC [cWW][XIX] 10.83 41.28; 55.36 14.08 -18.29 0.41 33.04
SRP_RNA 3KTV 131!A:166!A A:U WC [cWW][XX] 11.42 46.5; 40.54 5.96 -1.51 0.95 16.63
SRP_RNA 3KTV 133!A:164!A A:G Wb [---][-] 12.54 47.59; 67.49 19.9 3.17 0.37 21.31
SRP_RNA 3KTV 134!A:163!A U:A WC [cWW][XX] 10.18 56.54; 64.52 7.98 -17.85 1.25 34.11
SRP_RNA 3KTV 135!A:162!A G:C WC_Mo [cWW][XIX] 10.53 60.24; 61.56 1.32 7.95 0.09 12.62
SRP_RNA 3KTV 136!A:214!A G:A rS [tSS][-] 8.91 80.89; 54.28 26.61 161.0 1.74 30.79
SRP_RNA 3KTV 136!A:161!A G:C WC [cWW][XIX] 10.36 53.15; 61.49 8.34 7.7 0.42 25.36
SRP_RNA 3KTV 137!A:160!A U:A WC [cWW][XX] 10.22 57.21; 59.78 2.57 -4.89 0.04 18.63
SRP_RNA 3KTV 138!A:159!A G:C WC [cWW][XIX] 10.47 60.26; 51.9 8.36 0.03 0.0 2.88
SRP_RNA 3KTV 139!A:158!A A:C Wb [cWW][-] 10.6 48.7; 64.45 15.74 3.72 1.0 22.07
SRP_RNA 3KTV 140!A:157!A C:A WC [---][-] 10.08 64.28; 54.6 9.68 2.84 0.03 2.74
SRP_RNA 3KTV 141!A:156!A C:G WC [cWW][XIX] 10.69 56.84; 53.57 3.27 1.12 0.2 15.79
SRP_RNA 3KTV 142!A:155!A U:G Wb [cWW][XXVIII] 10.39 67.15; 47.67 19.48 4.81 0.32 3.7
SRP_RNA 3KTV 143!A:154!A C:G WC [cWW][XIX] 10.6 54.68; 58.15 3.47 3.26 0.01 8.63
SRP_RNA 3KTV 144!A:153!A C:G WC [cWW][XIX] 10.67 48.69; 56.35 7.66 3.01 0.48 14.43
SRP_RNA 3KTV 145!A:152!A C:G WC [cWW][XIX] 10.1 60.56; 60.66 0.1 0.49 0.5 10.99
SRP_RNA 3KTV 146!A:151!A G:C WC [cWW][XIX] 10.18 59.01; 50.58 8.44 1.02 0.19 25.34
SRP_RNA 3KTV 149!A:201!A A:A rWb* [tWW][I] 14.01 27.81; 21.1 6.71 161.25 0.65 22.66
SRP_RNA 3KTV 149!A:197!A A:G pfS(sb:O2*-N3) [---][-] 5.65 96.09; 143.63 47.54 -20.82 1.0 20.84
SRP_RNA 3KTV 150!A:202!A G:C rS [tSS][-] 8.83 82.79; 77.22 5.57 -148.45 1.04 29.43
SRP_RNA 3KTV 150!A:201!A G:A Wb_v [---][-] 12.18 73.44; 19.96 53.47 -114.78 2.01 20.02
SRP_RNA 3KTV 150!A:197!A G:G rpS [cSS][-] 4.18 125.74; 100.32 25.42 122.55 0.54 31.0
SRP_RNA 3KTV 162!A:213!A C:A rpS(sb:O2*-N3) [cSS][-] 6.33 161.25; 82.0 79.25 -46.93 0.14 37.25
SRP_RNA 3KTV 165!A:176!A G:A rH*_1 [tHW][-] 11.54 30.48; 12.9 17.58 162.34 0.39 57.42
SRP_RNA 3KTV 175!A:221!A G:C WC [cWW][XIX] 10.74 51.53; 47.19 4.34 -9.53 0.94 34.3
SRP_RNA 3KTV 177!A:220!A G:C WC [cWW][XIX] 9.69 51.11; 67.95 16.84 27.03 0.32 46.8
SRP_RNA 3KTV 178!A:219!A G:C WC [cWW][XIX] 10.61 64.82; 53.23 11.59 16.13 1.02 12.25
SRP_RNA 3KTV 179!A:218!A G:U Wb [cWW][XXVIII] 10.7 42.64; 65.44 22.8 -5.43 0.4 25.42
SRP_RNA 3KTV 180!A:217!A G:C WC [cWW][XIX] 11.01 51.32; 57.52 6.2 -4.3 0.13 20.35
SRP_RNA 3KTV 181!A:216!A U:A WC [cWW][XX] 10.55 63.63; 54.38 9.25 5.35 0.38 18.53
SRP_RNA 3KTV 182!A:215!A G:A S [tSH][XI] 9.89 96.81; 11.45 85.36 -8.76 0.2 10.08
SRP_RNA 3KTV 187!A:212!A G:C WC [cWW][XIX] 10.43 56.1; 65.7 9.6 0.61 0.09 15.94
SRP_RNA 3KTV 188!A:211!A G:U Wb [cWW][XXVIII] 10.34 45.63; 69.66 24.04 -1.08 0.69 17.11
SRP_RNA 3KTV 189!A:210!A C:G WC [cWW][XIX] 10.73 46.63; 59.06 12.42 9.95 0.22 16.82
SRP_RNA 3KTV 190!A:209!A C:G WC [cWW][XIX] 10.4 61.4; 56.14 5.26 -0.78 0.11 5.71
SRP_RNA 3KTV 192!A:207!A A:C rH_1 [rWH][XXV] 10.64 9.91; 25.05 15.14 -160.18 0.38 11.96
SRP_RNA 3KTV 194!A:205!A G:A WC [cWW][VIII] 12.71 45.22; 43.63 1.59 11.73 0.15 12.83
SRP_RNA 3KTV 195!A:204!A U:G Wb [cWW][XXVIII] 10.66 59.33; 35.46 23.87 -1.52 0.16 7.38
SRP_RNA 3KTV 196!A:203!A C:G WC [cWW][XIX] 10.83 49.62; 56.28 6.65 3.88 0.12 5.18
SRP_RNA 3KTV 197!A:202!A G:C WC [cWW][XIX] 10.57 54.98; 56.66 1.67 12.44 0.4 20.19
SRP_RNA 3KTV 198!A:201!A G:A S [tSH][XI] 9.34 94.06; 14.41 79.65 -105.73 0.34 38.6
SRP_RNA 3KTV 122!C:228C* G:U WC [---][-]; WC_mo [---][-] 11.2 54.07; 55.79 1.71 -5.54 0.23 15.97
SRP_RNA 3KTV 123!C:227!C C:G WC [cWW][XIX] 11.54 43.24; 50.29 7.05 9.51 0.42 10.8
SRP_RNA 3KTV 125!C:225!C G:C WC [cWW][XIX] 11.16 52.18; 41.58 10.59 15.39 0.14 13.9
SRP_RNA 3KTV 126!C:224!C C:G WC [cWW][XIX] 10.07 67.8; 55.25 12.55 -2.33 0.7 28.17
SRP_RNA 3KTV 128!C:222!C U:G Wb [cWW][XXVIII] 11.26 47.33; 36.01 11.32 5.38 0.23 4.34
SRP_RNA 3KTV 129!C:168!C C:G WC [cWW][XIX] 10.71 42.54; 62.63 20.1 -18.93 0.26 24.95
SRP_RNA 3KTV 131!C:166!C A:U Wb* [---][-] 11.11 60.62; 43.68 16.94 -2.76 1.1 9.7
SRP_RNA 3KTV 132!C:165!C U:G Wb [cWW][XXVIII] 10.12 67.06; 45.11 21.96 -15.6 0.75 35.72
SRP_RNA 3KTV 133!C:164!C A:G Wb [---][-] 12.46 46.45; 76.4 29.95 -5.56 0.37 19.69
SRP_RNA 3KTV 134!C:163C* U:A WC [cWW][XX]; Wb* [---][-] 10.45 51.93; 63.62 11.69 -5.93 0.53 4.7
SRP_RNA 3KTV 135!C:162!C G:C WC_Mo [cWW][XIX] 10.85 59.25; 60.71 1.47 7.19 0.65 16.23
SRP_RNA 3KTV 136!C:214!C G:A rS [tSS][-] 8.94 87.25; 55.64 31.61 164.43 0.29 16.36
SRP_RNA 3KTV 136!C:161!C G:C WC [cWW][XIX] 10.4 56.69; 54.11 2.58 4.39 0.21 33.78
SRP_RNA 3KTV 137!C:160!C U:A WC [cWW][XX] 10.43 52.46; 56.71 4.25 -5.07 0.2 13.02
SRP_RNA 3KTV 138!C:159!C G:C WC [cWW][XIX] 10.77 52.03; 42.85 9.18 -1.02 0.03 14.29
SRP_RNA 3KTV 139!C:158!C A:C WC [---][-] 10.44 53.54; 60.42 6.87 -0.64 0.16 9.61
SRP_RNA 3KTV 140!C:157!C C:A Wb [cWW][-] 10.06 70.62; 52.39 18.23 2.77 0.01 1.72
SRP_RNA 3KTV 141!C:156!C C:G WC [cWW][XIX] 10.71 59.13; 51.82 7.31 -6.74 0.5 16.87
SRP_RNA 3KTV 142!C:155!C U:G Wb [cWW][XXVIII] 9.99 67.37; 46.77 20.6 5.98 0.21 10.18
SRP_RNA 3KTV 143!C:154!C C:G WC [cWW][XIX] 10.76 57.79; 52.57 5.22 6.01 0.23 9.42
SRP_RNA 3KTV 144!C:153!C C:G WC [cWW][XIX] 10.38 46.35; 59.26 12.9 5.7 0.11 10.4
SRP_RNA 3KTV 145!C:152!C C:G WC [cWW][XIX] 10.02 61.22; 60.53 0.69 3.55 0.26 6.29
SRP_RNA 3KTV 146!C:151!C G:C WC [cWW][XIX] 10.04 58.12; 56.12 2.0 -1.0 0.03 18.21
SRP_RNA 3KTV 149!C:201!C A:A rWb* [tWW][I] 13.7 31.4; 27.95 3.45 160.55 0.71 16.82
SRP_RNA 3KTV 149!C:197!C A:G pfS(sb:O2*-N3) [---][-] 5.64 97.03; 144.31 47.28 -22.1 2.21 6.07
SRP_RNA 3KTV 150!C:202!C G:C rS [tSS][-] 8.58 83.91; 76.89 7.02 -150.23 0.93 31.78
SRP_RNA 3KTV 150!C:197!C G:G rpS [cSS][-] 4.57 119.77; 97.29 22.49 125.12 0.11 32.36
SRP_RNA 3KTV 161!C:214!C C:A rpS(bs:O2-O2*) [cSS][-] 5.3 113.35; 141.16 27.81 -26.49 1.22 19.53
SRP_RNA 3KTV 162!C:213!C C:A rpS(sb:O2*-N3) [cSS][-] 6.05 161.15; 85.67 75.47 -45.13 1.43 53.8
SRP_RNA 3KTV 177!C:220!C G:C WC [cWW][XIX] 10.25 51.04; 55.93 4.89 3.2 0.16 5.62
SRP_RNA 3KTV 178!C:219!C G:C WC [cWW][XIX] 10.69 55.61; 48.51 7.09 -10.2 0.4 21.09
SRP_RNA 3KTV 179!C:218!C G:U Wb [cWW][XXVIII] 10.42 34.97; 57.97 23.0 -0.52 0.46 17.8
SRP_RNA 3KTV 180!C:217!C G:C WC [cWW][XIX] 10.31 54.05; 59.4 5.35 -10.92 0.13 11.16
SRP_RNA 3KTV 181!C:216!C U:A WC [cWW][XX] 10.39 56.99; 50.81 6.17 -2.93 0.29 12.5
SRP_RNA 3KTV 182!C:215!C G:A S [tSH][XI] 9.31 99.08; 10.65 88.43 -31.47 0.33 14.02
SRP_RNA 3KTV 187!C:212!C G:C Wb [---][-] 10.31 51.34; 67.67 16.33 6.42 0.83 21.5
SRP_RNA 3KTV 188!C:211!C G:U Wb [cWW][XXVIII] 10.21 41.29; 67.44 26.16 -2.76 0.25 12.49
SRP_RNA 3KTV 189!C:210!C C:G WC [cWW][XIX] 11.05 46.27; 52.29 6.03 -6.41 0.36 12.27
SRP_RNA 3KTV 190!C:209!C C:G WC [cWW][XIX] 10.68 58.71; 50.52 8.19 1.94 0.13 13.5
SRP_RNA 3KTV 192!C:207!C A:C rH_1 [rWH][XXV] 10.79 5.84; 23.61 17.77 -165.68 0.48 15.45
SRP_RNA 3KTV 193!C:206!C G:G S_1 [tSH][-] 11.73 11.01; 81.56 70.55 20.59 0.2 14.95
SRP_RNA 3KTV 194!C:205!C G:A WC [cWW][VIII] 12.88 47.78; 47.87 0.09 -10.35 0.81 21.97
SRP_RNA 3KTV 195!C:204!C U:G Wb [cWW][XXVIII] 10.35 62.11; 46.0 16.11 -10.95 0.48 20.38
SRP_RNA 3KTV 196!C:203!C C:G WC [cWW][XIX] 10.43 49.18; 52.64 3.46 -6.88 0.52 17.6
SRP_RNA 3KTV 197!C:202!C G:C WC [cWW][XIX] 10.53 55.34; 55.95 0.61 6.91 0.68 1.1
SRP_RNA 3KTV 198!C:201!C G:A S [tSH][XI] 8.86 95.43; 11.06 84.37 -54.02 0.23 27.03
SRP_RNA 3KTV 226!C:227!C U:G pS [---][-] 5.67 117.12; 54.02 63.09 -5.74 1.74 23.22