Identified Basepairs and Their Conformations and Conformational Parameters

PDB Id: 3LA5 BPC Identified: 38 Ambiguities: 0
RNA PDB Position bp bpC; LG [LW][Sanger] dCC <X ; <Y |<X - <Y| Torsion Z-Diff Buckle
Riboswitch 3LA5 13!A:83!A G:C WC [cWW][XIX] 10.99 51.09; 54.11 3.03 4.7 0.17 9.1
Riboswitch 3LA5 14!A:82!A G:U Wb [cWW][XXVIII] 10.39 40.35; 70.2 29.85 -12.18 0.34 15.42
Riboswitch 3LA5 15!A:81!A C:G WC [cWW][XIX] 10.58 52.86; 54.85 1.99 -18.31 0.23 25.25
Riboswitch 3LA5 16!A:80!A U:A WC [cWW][XX] 10.42 52.6; 57.04 4.43 -16.08 0.09 20.21
Riboswitch 3LA5 17!A:79!A U:G WC [---][-] 10.71 50.17; 55.36 5.19 -12.33 0.01 20.13
Riboswitch 3LA5 18!A:78!A C:G WC [cWW][XIX] 10.68 54.16; 54.63 0.47 -9.33 0.1 16.6
Riboswitch 3LA5 19!A:77!A A:U WC [cWW][XX] 10.51 56.12; 54.53 1.58 -12.64 0.24 18.13
Riboswitch 3LA5 20!A:76!A U:A WC [cWW][XX] 10.31 57.48; 54.98 2.5 -12.75 0.33 22.2
Riboswitch 3LA5 21!A:75!A A:U WC [cWW][XX] 10.36 57.63; 55.77 1.86 -7.03 0.07 9.21
Riboswitch 3LA5 22!A:52!A U:A WC [cWW][XX] 10.35 56.25; 58.64 2.4 -3.73 0.52 12.0
Riboswitch 3LA5 23!A:46!A A:G fS [tSW][X] 9.6 4.73; 118.96 114.23 104.45 0.08 10.43
Riboswitch 3LA5 24!A:53!A A:C rpS(ss:O2*-O2*)_1 [cSS][-] 5.46 150.48; 139.84 10.64 -121.43 2.11 38.65
Riboswitch 3LA5 25!A:45!A U:A WC [cWW][XX] 10.85 51.71; 53.72 2.01 -4.34 0.06 6.68
Riboswitch 3LA5 26!A:44!A C:G WC [cWW][XIX] 10.65 54.57; 55.65 1.08 -6.81 0.52 14.36
Riboswitch 3LA5 27!A:43!A C:G WC [cWW][XIX] 10.62 56.54; 55.19 1.34 -5.93 0.1 8.74
Riboswitch 3LA5 28!A:42!A G:C WC [cWW][XIX] 10.65 53.85; 54.07 0.21 -10.64 0.44 16.96
Riboswitch 3LA5 29!A:41!A A:U WC [cWW][XX] 10.66 54.11; 54.44 0.33 -9.5 0.02 9.8
Riboswitch 3LA5 30!A:40!A A:U WC [cWW][XX] 10.07 59.74; 59.83 0.09 -10.6 0.79 21.04
Riboswitch 3LA5 31!A:39!A U:U Wb [cWW][XVI] 8.34 78.6; 46.55 32.05 -19.89 0.68 25.34
Riboswitch 3LA5 33!A:66!A A:A rH [tWH][V] 12.25 19.99; 21.11 1.12 156.05 0.19 7.25
Riboswitch 3LA5 33!A:37!A A:G rpS(sb:O2*-N3) [---][-] 5.52 101.52; 156.26 54.74 -20.83 1.92 16.88
Riboswitch 3LA5 34!A:65!A U:A rH_1 [tWH][XXIV] 9.68 28.83; 21.81 7.02 175.34 0.25 10.72
Riboswitch 3LA5 34!A:37!A U:G rpS [cSS][-] 4.22 125.68; 106.6 19.08 117.74 0.84 28.81
Riboswitch 3LA5 35!A:64!A A:A rH [tWH][V] 12.28 20.45; 19.54 0.91 -166.32 0.11 6.35
Riboswitch 3LA5 37!A:61!A G:C WC [cWW][XIX] 10.71 53.24; 53.16 0.08 -15.22 0.33 12.48
Riboswitch 3LA5 38!A:66!A G:A fS [tSW][X] 9.33 119.56; 20.44 99.12 -96.82 0.03 29.26
Riboswitch 3LA5 38!A:60!A G:C WC [cWW][XIX] 10.64 54.46; 54.15 0.31 -11.02 0.55 20.81
Riboswitch 3LA5 46!A:53!A G:C WC [cWW][XIX] 10.58 54.6; 54.33 0.28 0.68 0.96 24.59
Riboswitch 3LA5 47!A:49!A C:U S*(ps:O2P-O2*) [---][-] 5.65 83.39; 63.33 20.06 -140.57 1.11 42.13
Riboswitch 3LA5 49!A:76!A U:A pfS* [cWS][-] 6.08 62.35; 131.4 69.05 16.47 0.82 21.44
Riboswitch 3LA5 50!A:75!A C:U pfS [cSW][-] 7.71 39.31; 132.88 93.58 -26.19 0.33 18.58
Riboswitch 3LA5 54!A:72!A C:G WC [cWW][XIX] 10.71 54.51; 52.41 2.1 -7.96 0.44 14.56
Riboswitch 3LA5 55!A:71!A A:U WC [cWW][XX] 10.35 55.41; 57.77 2.36 -9.48 0.1 8.8
Riboswitch 3LA5 56!A:70!A A:U WC [cWW][XX] 10.53 56.18; 51.98 4.2 -12.96 0.2 15.86
Riboswitch 3LA5 57!A:69!A G:C WC [cWW][XIX] 10.68 53.85; 53.91 0.06 -12.24 0.17 18.34
Riboswitch 3LA5 58!A:68!A A:U WC [cWW][XX] 10.46 57.71; 54.02 3.69 -11.86 0.04 13.12
Riboswitch 3LA5 59!A:67!A G:C WC [cWW][XIX] 10.66 53.57; 53.88 0.31 -12.74 0.48 23.83
Riboswitch 3LA5 61!A:65!A C:A pfS [cSW][-] 9.12 130.29; 38.45 91.84 19.04 0.14 15.04