Identified Basepairs and Their Conformations and Conformational Parameters

PDB Id: 3MJA BPC Identified: 16 Ambiguities: 0
RNA PDB Position bp bpC; LG [LW][Sanger] dCC <X ; <Y |<X - <Y| Torsion Z-Diff Buckle
IRES_RNA 3MJA 6174!B:6202!B G:C WC [cWW][XIX] 10.46 53.35; 54.47 1.11 -12.71 0.09 16.87
IRES_RNA 3MJA 6175!B:6201!B G:C WC [cWW][XIX] 10.74 52.7; 56.05 3.35 -8.86 0.22 19.2
IRES_RNA 3MJA 6176!B:6200!B U:A WC [cWW][XX] 10.78 55.87; 53.25 2.62 -11.01 0.12 14.11
IRES_RNA 3MJA 6177!B:6199!B U:G WC [---][-] 10.47 55.33; 55.26 0.08 -8.77 0.23 9.61
IRES_RNA 3MJA 6178!B:6198!B A:U WC [cWW][XX] 10.39 59.84; 47.45 12.39 -4.32 0.13 9.85
IRES_RNA 3MJA 6179!B:6197!B U:A WC [cWW][XX] 10.47 55.51; 56.27 0.76 -7.56 0.05 10.19
IRES_RNA 3MJA 6180!B:6196!B U:A WC [cWW][XX] 10.31 58.46; 56.87 1.59 -16.18 0.16 17.03
IRES_RNA 3MJA 6181!B:6195!B C:G WC [cWW][XIX] 10.6 50.69; 50.1 0.59 -0.97 0.04 5.56
IRES_RNA 3MJA 6183!B:6194!B G:C WC [cWW][XIX] 10.6 52.12; 54.35 2.23 -15.76 0.21 19.0
IRES_RNA 3MJA 6184!B:6193!B A:U WC [cWW][XX] 10.72 54.98; 50.87 4.12 -24.0 0.42 32.92
IRES_RNA 3MJA 6187!B:6216!C A:U WC [cWW][XX] 10.89 52.98; 51.24 1.74 -11.02 0.3 12.34
IRES_RNA 3MJA 6188!B:6215!C G:C WC [cWW][XIX] 10.63 53.05; 54.37 1.32 -10.94 0.02 13.16
IRES_RNA 3MJA 6189!B:6214!C G:C WC [cWW][XIX] 10.18 55.01; 60.41 5.4 -10.13 0.22 18.2
IRES_RNA 3MJA 6190!B:6213!C U:A WC [cWW][XX] 10.37 57.54; 48.53 9.01 -8.83 0.01 13.49
IRES_RNA 3MJA 6191!B:6212!C A:U WC [cWW][XX] 10.49 57.87; 52.91 4.96 -4.07 0.02 7.29
IRES_RNA 3MJA 6192!B:6209!C G:A rS [tSS][-] 8.17 88.69; 50.5 38.19 149.68 1.27 46.03