Identified Basepairs and Their Conformations and Conformational Parameters
RNA |
PDB |
Position |
bp |
bpC; LG [LW][Sanger] |
dCC |
<X ; <Y |
|<X - <Y| |
Torsion |
Z-Diff |
Buckle |
PDB Id: 3MUT
BPC Identified: 39
Ambiguities: 0
Riboswitch |
3MUT |
11!R:98!R |
C:G |
WC [cWW][XIX] |
11.25 |
49.22; 56.86 |
7.64 |
-11.53 |
0.28 |
20.93 |
Riboswitch |
3MUT |
12!R:97!R |
A:G |
WC [cWW][VIII] |
13.07 |
47.42; 44.23 |
3.19 |
-4.13 |
0.34 |
23.13 |
Riboswitch |
3MUT |
13!R:97!R |
C:G |
pfS [---][-] |
9.91 |
83.69; 57.36 |
26.33 |
-23.24 |
1.66 |
20.73 |
Riboswitch |
3MUT |
13!R:94!R |
C:G |
WC [cWW][XIX] |
11.31 |
47.91; 59.84 |
11.93 |
-15.48 |
0.48 |
22.95 |
Riboswitch |
3MUT |
14!R:95!R |
G:A |
fS [tSW][X] |
9.75 |
102.97; 16.14 |
86.83 |
150.81 |
0.5 |
42.49 |
Riboswitch |
3MUT |
14!R:93!R |
G:C |
WC [cWW][XIX] |
11.06 |
49.37; 49.91 |
0.54 |
-5.8 |
0.17 |
7.53 |
Riboswitch |
3MUT |
16!R:93!R |
A:C |
S [tSH][-] |
10.47 |
18.07; 96.82 |
78.75 |
30.23 |
1.23 |
40.53 |
Riboswitch |
3MUT |
21!R:46!R |
G:C |
WC [cWW][XIX] |
10.52 |
57.02; 57.81 |
0.79 |
3.07 |
0.22 |
6.68 |
Riboswitch |
3MUT |
22!R:45!R |
C:G |
WC [cWW][XIX] |
11.09 |
44.62; 57.58 |
12.95 |
6.32 |
0.39 |
11.29 |
Riboswitch |
3MUT |
25!R:42!R |
A:G |
S [tSH][XI] |
9.55 |
12.64; 102.38 |
89.74 |
-7.14 |
0.53 |
10.8 |
Riboswitch |
3MUT |
26!R:41!R |
C:G |
WC [cWW][XIX] |
10.92 |
48.17; 55.25 |
7.07 |
-4.12 |
0.05 |
15.64 |
Riboswitch |
3MUT |
27!R:40!R |
C:G |
WC [cWW][XIX] |
10.65 |
55.62; 51.3 |
4.32 |
-8.42 |
0.35 |
17.7 |
Riboswitch |
3MUT |
28!R:39!R |
A:U |
WC [cWW][XX] |
10.56 |
55.81; 53.72 |
2.09 |
-12.08 |
0.28 |
13.03 |
Riboswitch |
3MUT |
29!R:38!R |
U:G |
Wb [cWW][XXVIII] |
10.2 |
71.51; 47.46 |
24.05 |
-9.16 |
0.25 |
14.83 |
Riboswitch |
3MUT |
30!R:37!R |
U:A |
WC [cWW][XX] |
10.8 |
48.34; 54.85 |
6.52 |
3.97 |
0.89 |
19.42 |
Riboswitch |
3MUT |
31!R:36!R |
C:G |
WC [cWW][XIX] |
10.55 |
53.71; 55.53 |
1.82 |
11.72 |
0.06 |
22.7 |
Riboswitch |
3MUT |
32!R:35!R |
G:A |
S [tSH][XI] |
9.63 |
95.99; 14.76 |
81.23 |
-112.14 |
0.94 |
15.68 |
Riboswitch |
3MUT |
32!R:34!R |
G:A |
S(sb:O2*-N7) [---][-] |
7.46 |
86.69; 35.89 |
50.8 |
-172.0 |
2.18 |
30.36 |
Riboswitch |
3MUT |
34!R:60!R |
A:U |
rpS(sb:O2*-N3) [cSS][-] |
6.0 |
91.51; 154.47 |
62.96 |
-43.23 |
1.83 |
43.81 |
Riboswitch |
3MUT |
35!R:79!R |
A:G |
rS [tSS][-] |
8.29 |
65.87; 83.14 |
17.27 |
163.03 |
0.3 |
13.81 |
Riboswitch |
3MUT |
35!R:59!R |
A:C |
rpS(bs:O2-O2*) [cSS][-] |
5.77 |
154.96; 106.38 |
48.58 |
-60.97 |
0.93 |
13.95 |
Riboswitch |
3MUT |
44!R:83!R |
C:G |
WC [cWW][XIX] |
10.76 |
60.07; 53.29 |
6.78 |
-7.6 |
0.06 |
10.32 |
Riboswitch |
3MUT |
45!R:49!R |
G:A |
rS [tSS][-] |
8.37 |
92.6; 55.53 |
37.06 |
156.94 |
1.0 |
31.75 |
Riboswitch |
3MUT |
48!R:90!R |
A:U |
rH_1 [tWH][XXIV] |
9.44 |
18.04; 38.5 |
20.47 |
144.96 |
0.81 |
12.09 |
Riboswitch |
3MUT |
50!R:89!R |
G:U |
Wb [cWW][XXVIII] |
10.3 |
35.51; 61.37 |
25.86 |
-6.31 |
0.32 |
22.94 |
Riboswitch |
3MUT |
51!R:88!R |
C:G |
WC [cWW][XIX] |
11.09 |
48.03; 49.11 |
1.08 |
-7.53 |
0.01 |
16.2 |
Riboswitch |
3MUT |
52!R:87!R |
C:G |
WC [cWW][XIX] |
10.87 |
57.14; 51.69 |
5.45 |
-6.89 |
0.07 |
13.59 |
Riboswitch |
3MUT |
54!R:86!R |
C:G |
WC [cWW][XIX] |
10.8 |
54.53; 55.78 |
1.26 |
-4.95 |
0.26 |
37.78 |
Riboswitch |
3MUT |
54!R:82!R |
C:A |
rH* [---][-] |
13.18 |
3.31; 42.54 |
39.23 |
-178.35 |
1.01 |
35.9 |
Riboswitch |
3MUT |
55!R:85!R |
C:G |
WC [cWW][XIX] |
10.82 |
54.42; 48.84 |
5.59 |
-3.83 |
0.08 |
6.8 |
Riboswitch |
3MUT |
56!R:84!R |
G:C |
WC [cWW][XIX] |
10.38 |
50.28; 60.63 |
10.35 |
-3.62 |
0.22 |
11.4 |
Riboswitch |
3MUT |
57!R:81!R |
G:U |
Wb [cWW][XXVIII] |
10.68 |
41.11; 60.4 |
19.28 |
-4.77 |
0.14 |
9.26 |
Riboswitch |
3MUT |
58!R:80!R |
C:G |
WC [cWW][XIX] |
10.56 |
51.48; 52.42 |
0.94 |
-12.78 |
0.72 |
25.5 |
Riboswitch |
3MUT |
59!R:79!R |
C:G |
WC [cWW][XIX] |
10.74 |
57.87; 51.06 |
6.81 |
-11.42 |
0.26 |
19.05 |
Riboswitch |
3MUT |
60!R:78!R |
U:A |
WC [cWW][XX] |
10.03 |
55.87; 63.33 |
7.46 |
-4.66 |
0.85 |
20.41 |
Riboswitch |
3MUT |
61!R:77!R |
A:U |
Wb* [---][-] |
10.91 |
62.58; 46.05 |
16.53 |
-6.37 |
0.34 |
5.89 |
Riboswitch |
3MUT |
64!R:76!R |
C:G |
Wb* [---][-] |
10.41 |
53.48; 68.32 |
14.84 |
-14.15 |
1.13 |
48.16 |
Riboswitch |
3MUT |
65!R:75!R |
C:G |
Wb* [---][-] |
11.18 |
47.21; 60.09 |
12.89 |
7.38 |
0.17 |
26.2 |
Riboswitch |
3MUT |
82!R:83!R |
A:G |
rS(ps:O1P-O2*) [---][-] |
8.07 |
154.24; 110.83 |
43.41 |
-79.52 |
0.38 |
35.27 |