Identified Basepairs and Their Conformations and Conformational Parameters
| RNA |
PDB |
Position |
bp |
bpC; LG [LW][Sanger] |
dCC |
<X ; <Y |
|<X - <Y| |
Torsion |
Z-Diff |
Buckle |
PDB Id: 3O3I
BPC Identified: 12
Ambiguities: 0
| piRNA |
3O3I |
1!A:12!a |
G:C |
WC [cWW][XIX] |
10.49 |
52.12; 55.15 |
3.03 |
-3.6 |
0.33 |
12.69 |
| piRNA |
3O3I |
2!A:11!a |
C:G |
WC [cWW][XIX] |
10.7 |
53.53; 51.74 |
1.78 |
-7.95 |
0.08 |
11.65 |
| piRNA |
3O3I |
3!A:10!a |
G:C |
WC [cWW][XIX] |
10.62 |
52.89; 54.07 |
1.18 |
-3.26 |
0.1 |
6.73 |
| piRNA |
3O3I |
4!A:9!a |
A:U |
WC [cWW][XX] |
10.62 |
55.39; 55.0 |
0.39 |
-4.11 |
0.24 |
9.26 |
| piRNA |
3O3I |
5!A:8!a |
A:U |
WC [cWW][XX] |
10.35 |
56.92; 56.39 |
0.54 |
-9.93 |
0.18 |
19.96 |
| piRNA |
3O3I |
6!A:7!a |
U:A |
WC [cWW][XX] |
10.8 |
48.78; 56.29 |
7.52 |
-6.47 |
0.01 |
13.98 |
| piRNA |
3O3I |
7!A:6!a |
A:U |
WC [cWW][XX] |
10.8 |
56.29; 48.78 |
7.52 |
-6.47 |
0.01 |
13.98 |
| piRNA |
3O3I |
8!A:5!a |
U:A |
WC [cWW][XX] |
10.35 |
56.39; 56.92 |
0.54 |
-9.93 |
0.18 |
19.96 |
| piRNA |
3O3I |
9!A:4!a |
U:A |
WC [cWW][XX] |
10.62 |
55.0; 55.39 |
0.39 |
-4.11 |
0.24 |
9.26 |
| piRNA |
3O3I |
10!A:3!a |
C:G |
WC [cWW][XIX] |
10.62 |
54.07; 52.89 |
1.18 |
-3.26 |
0.1 |
6.73 |
| piRNA |
3O3I |
11!A:2!a |
G:C |
WC [cWW][XIX] |
10.7 |
51.74; 53.53 |
1.78 |
-7.95 |
0.08 |
11.65 |
| piRNA |
3O3I |
12!A:1!a |
C:G |
WC [cWW][XIX] |
10.49 |
55.15; 52.12 |
3.03 |
-3.6 |
0.33 |
12.69 |