Identified Basepairs and Their Conformations and Conformational Parameters

PDB Id: 3O3I BPC Identified: 12 Ambiguities: 0
RNA PDB Position bp bpC; LG [LW][Sanger] dCC <X ; <Y |<X - <Y| Torsion Z-Diff Buckle
piRNA 3O3I 1!A:12!a G:C WC [cWW][XIX] 10.49 52.12; 55.15 3.03 -3.6 0.33 12.69
piRNA 3O3I 2!A:11!a C:G WC [cWW][XIX] 10.7 53.53; 51.74 1.78 -7.95 0.08 11.65
piRNA 3O3I 3!A:10!a G:C WC [cWW][XIX] 10.62 52.89; 54.07 1.18 -3.26 0.1 6.73
piRNA 3O3I 4!A:9!a A:U WC [cWW][XX] 10.62 55.39; 55.0 0.39 -4.11 0.24 9.26
piRNA 3O3I 5!A:8!a A:U WC [cWW][XX] 10.35 56.92; 56.39 0.54 -9.93 0.18 19.96
piRNA 3O3I 6!A:7!a U:A WC [cWW][XX] 10.8 48.78; 56.29 7.52 -6.47 0.01 13.98
piRNA 3O3I 7!A:6!a A:U WC [cWW][XX] 10.8 56.29; 48.78 7.52 -6.47 0.01 13.98
piRNA 3O3I 8!A:5!a U:A WC [cWW][XX] 10.35 56.39; 56.92 0.54 -9.93 0.18 19.96
piRNA 3O3I 9!A:4!a U:A WC [cWW][XX] 10.62 55.0; 55.39 0.39 -4.11 0.24 9.26
piRNA 3O3I 10!A:3!a C:G WC [cWW][XIX] 10.62 54.07; 52.89 1.18 -3.26 0.1 6.73
piRNA 3O3I 11!A:2!a G:C WC [cWW][XIX] 10.7 51.74; 53.53 1.78 -7.95 0.08 11.65
piRNA 3O3I 12!A:1!a C:G WC [cWW][XIX] 10.49 55.15; 52.12 3.03 -3.6 0.33 12.69