Identified Basepairs and Their Conformations and Conformational Parameters

PDB Id: 3O6E BPC Identified: 12 Ambiguities: 0
RNA PDB Position bp bpC; LG [LW][Sanger] dCC <X ; <Y |<X - <Y| Torsion Z-Diff Buckle
piRNA 3O6E 1!A:12!a G:C WC [cWW][XIX] 10.56 53.61; 54.41 0.8 -0.14 0.8 17.13
piRNA 3O6E 2!A:11!a C:G WC [cWW][XIX] 10.86 51.5; 49.43 2.07 -3.18 0.09 8.04
piRNA 3O6E 3!A:10!a G:C WC [cWW][XIX] 10.75 53.08; 50.72 2.36 -4.8 0.0 9.42
piRNA 3O6E 4!A:9!a A:U WC [cWW][XX] 10.52 58.39; 57.49 0.91 -3.12 0.13 6.49
piRNA 3O6E 5!A:8!a A:U WC [cWW][XX] 10.41 55.7; 54.83 0.87 -10.45 0.02 20.06
piRNA 3O6E 6!A:7!a U:A WC [cWW][XX] 10.68 54.62; 57.14 2.52 -6.84 0.02 12.57
piRNA 3O6E 7!A:6!a A:U WC [cWW][XX] 10.68 57.14; 54.62 2.52 -6.84 0.02 12.57
piRNA 3O6E 8!A:5!a U:A WC [cWW][XX] 10.41 54.83; 55.7 0.87 -10.45 0.02 20.06
piRNA 3O6E 9!A:4!a U:A WC [cWW][XX] 10.52 57.49; 58.39 0.91 -3.12 0.13 6.49
piRNA 3O6E 10!A:3!a C:G WC [cWW][XIX] 10.75 50.72; 53.08 2.36 -4.8 0.0 9.42
piRNA 3O6E 11!A:2!a G:C WC [cWW][XIX] 10.86 49.43; 51.5 2.07 -3.18 0.09 8.04
piRNA 3O6E 12!A:1!a C:G WC [cWW][XIX] 10.56 54.41; 53.61 0.8 -0.14 0.8 17.13