Identified Basepairs and Their Conformations and Conformational Parameters
RNA |
PDB |
Position |
bp |
bpC; LG [LW][Sanger] |
dCC |
<X ; <Y |
|<X - <Y| |
Torsion |
Z-Diff |
Buckle |
PDB Id: 3OG8
BPC Identified: 14
Ambiguities: 0
dsRNA |
3OG8 |
1!C:14!D |
G:C |
WC [cWW][XIX] |
10.72 |
50.74; 55.61 |
4.87 |
0.48 |
0.22 |
7.28 |
dsRNA |
3OG8 |
2!C:13!D |
G:C |
WC [cWW][XIX] |
10.77 |
51.41; 57.62 |
6.21 |
-9.62 |
0.32 |
7.2 |
dsRNA |
3OG8 |
3!C:12!D |
C:G |
WC [cWW][XIX] |
10.64 |
57.08; 50.38 |
6.7 |
-9.01 |
0.13 |
14.83 |
dsRNA |
3OG8 |
4!C:11!D |
G:C |
WC [cWW][XIX] |
10.6 |
57.31; 53.9 |
3.4 |
-3.29 |
0.08 |
10.28 |
dsRNA |
3OG8 |
5!C:10!D |
C:G |
WC [cWW][XIX] |
10.71 |
53.36; 57.4 |
4.04 |
4.33 |
0.0 |
7.86 |
dsRNA |
3OG8 |
6!C:9!D |
G:C |
WC [cWW][XIX] |
10.71 |
53.63; 54.87 |
1.24 |
-5.27 |
0.16 |
6.84 |
dsRNA |
3OG8 |
7!C:8!D |
C:G |
WC [cWW][XIX] |
10.59 |
55.87; 55.55 |
0.32 |
-1.11 |
0.29 |
9.31 |
dsRNA |
3OG8 |
8!C:7!D |
G:C |
WC [cWW][XIX] |
10.68 |
57.8; 54.71 |
3.09 |
-6.74 |
0.24 |
13.33 |
dsRNA |
3OG8 |
9!C:6!D |
C:G |
WC [cWW][XIX] |
10.6 |
56.63; 54.78 |
1.85 |
-4.91 |
0.01 |
8.87 |
dsRNA |
3OG8 |
10!C:5!D |
G:C |
WC [cWW][XIX] |
10.64 |
53.41; 58.6 |
5.19 |
-4.78 |
0.2 |
13.37 |
dsRNA |
3OG8 |
11!C:4!D |
C:G |
WC [cWW][XIX] |
10.74 |
54.36; 56.41 |
2.05 |
-5.21 |
0.15 |
16.27 |
dsRNA |
3OG8 |
12!C:3!D |
G:C |
WC [cWW][XIX] |
10.64 |
54.38; 55.99 |
1.61 |
-7.53 |
0.03 |
12.59 |
dsRNA |
3OG8 |
13!C:2!D |
C:G |
WC [cWW][XIX] |
10.65 |
55.84; 52.47 |
3.37 |
-13.25 |
0.22 |
13.01 |
dsRNA |
3OG8 |
14!C:1!D |
C:G |
WC [cWW][XIX] |
10.67 |
54.93; 51.82 |
3.11 |
-8.24 |
0.22 |
4.71 |