Identified Basepairs and Their Conformations and Conformational Parameters
| RNA |
PDB |
Position |
bp |
bpC; LG [LW][Sanger] |
dCC |
<X ; <Y |
|<X - <Y| |
Torsion |
Z-Diff |
Buckle |
PDB Id: 3OVA
BPC Identified: 14
Ambiguities: 0
| tRNA |
3OVA |
1!C:31!C |
G:C |
WC [cWW][XIX] |
10.69 |
52.21; 53.24 |
1.03 |
-10.34 |
0.02 |
7.69 |
| tRNA |
3OVA |
2!C:30!C |
G:C |
WC [cWW][XIX] |
10.56 |
53.24; 55.84 |
2.6 |
-12.11 |
0.12 |
14.83 |
| tRNA |
3OVA |
3!C:29!C |
A:U |
WC [cWW][XX] |
10.66 |
53.04; 50.11 |
2.92 |
-9.31 |
0.16 |
13.67 |
| tRNA |
3OVA |
4!C:28!C |
A:U |
WC [cWW][XX] |
10.37 |
59.0; 55.05 |
3.95 |
-9.54 |
0.03 |
15.86 |
| tRNA |
3OVA |
5!C:27!C |
G:C |
WC [cWW][XIX] |
10.39 |
56.18; 61.79 |
5.6 |
-14.45 |
0.13 |
26.49 |
| tRNA |
3OVA |
6!C:26!C |
U:A |
WC [cWW][XX] |
10.21 |
61.38; 56.27 |
5.11 |
-13.44 |
0.08 |
20.38 |
| tRNA |
3OVA |
7!C:25!C |
A:U |
WC [cWW][XX] |
10.12 |
64.12; 57.41 |
6.71 |
-9.88 |
0.28 |
10.08 |
| tRNA |
3OVA |
8!C:24!C |
G:U |
Wb [cWW][XXVIII] |
10.1 |
50.29; 72.36 |
22.07 |
-5.51 |
0.11 |
12.31 |
| tRNA |
3OVA |
9!C:23!C |
A:U |
WC [cWW][XX] |
10.38 |
57.53; 58.43 |
0.9 |
-6.06 |
0.34 |
13.75 |
| tRNA |
3OVA |
10!C:22!C |
U:A |
WC [cWW][XX] |
10.51 |
53.09; 54.19 |
1.1 |
-6.91 |
0.04 |
9.36 |
| tRNA |
3OVA |
11!C:21!C |
G:C |
WC [cWW][XIX] |
10.67 |
53.33; 53.33 |
0.0 |
-11.04 |
0.01 |
12.04 |
| tRNA |
3OVA |
12!C:20!C |
G:C |
WC [cWW][XIX] |
10.93 |
53.08; 49.59 |
3.49 |
-12.3 |
0.37 |
17.0 |
| tRNA |
3OVA |
13!C:17!C |
U:A |
rH_1 [tWH][XXIV] |
9.54 |
36.32; 19.34 |
16.97 |
149.58 |
0.16 |
14.56 |
| tRNA |
3OVA |
14!C:16!C |
U:A |
S(sb:O2*-N7) [---][-] |
6.85 |
79.77; 39.56 |
40.2 |
-170.85 |
1.75 |
23.67 |