Identified Basepairs and Their Conformations and Conformational Parameters

PDB Id: 3OWW BPC Identified: 93 Ambiguities: 0
RNA PDB Position bp bpC; LG [LW][Sanger] dCC <X ; <Y |<X - <Y| Torsion Z-Diff Buckle
Riboswitch 3OWW 1!A:88!A G:C WC [cWW][XIX] 11.35 45.85; 52.38 6.53 4.01 0.14 6.23
Riboswitch 3OWW 2!A:87!A G:U Wb [cWW][XXVIII] 10.98 39.18; 61.55 22.37 -7.77 0.08 15.22
Riboswitch 3OWW 3!A:86!A C:G WC [cWW][XIX] 10.96 50.05; 54.83 4.78 -10.1 0.41 30.13
Riboswitch 3OWW 4!A:85!A U:A WC [cWW][XX] 10.56 54.6; 56.46 1.86 -7.53 0.1 15.08
Riboswitch 3OWW 5!A:41!B C:A rpS(ss:O2*-O2*)_1 [cSS][-] 6.45 103.62; 147.52 43.9 -56.35 0.75 36.83
Riboswitch 3OWW 5!A:84!A C:G WC [cWW][XIX] 10.68 58.57; 55.42 3.15 -5.06 0.2 13.15
Riboswitch 3OWW 6!A:40!B U:A rpS(sb:O2*-N3) [cSS][-] 5.69 141.8; 94.52 47.28 -75.95 0.16 39.03
Riboswitch 3OWW 6!A:83!A U:A WC [cWW][XX] 10.06 62.32; 61.19 1.13 -6.28 0.05 12.56
Riboswitch 3OWW 7!A:64!B G:A rS [tSS][-] 8.13 95.28; 49.87 45.41 178.6 0.3 37.95
Riboswitch 3OWW 7!A:82!A G:C WC [cWW][XIX] 10.85 55.67; 51.0 4.68 -2.61 0.07 7.31
Riboswitch 3OWW 8!A:81!A G:A S [tSH][XI] 9.34 97.59; 9.57 88.02 -89.6 0.12 15.24
Riboswitch 3OWW 8!A:33!A G:A fS(sb:O2*-N1)_1 [---][-] 9.55 106.12; 39.13 66.99 167.98 2.27 19.68
Riboswitch 3OWW 9!A:80!A A:G S [tSH][XI] 9.41 16.96; 92.86 75.89 -105.26 0.03 25.37
Riboswitch 3OWW 10!A:31!A G:C rpS [cSS][-] 5.6 94.78; 154.25 59.47 -44.54 0.77 43.72
Riboswitch 3OWW 11!A:73!A A:G rS [tSS][-] 8.3 57.36; 87.47 30.11 157.17 0.81 32.72
Riboswitch 3OWW 11!A:30!A A:C rpS(bs:O2-O2*) [cSS][-] 5.66 150.74; 101.47 49.27 -34.63 1.61 14.45
Riboswitch 3OWW 12!A:28!A G:C WC [cWW][XIX] 10.72 54.99; 52.33 2.66 -6.9 0.04 11.3
Riboswitch 3OWW 14!A:27!A A:U WC [cWW][XX] 10.48 51.37; 56.58 5.2 -10.98 0.4 18.52
Riboswitch 3OWW 15!A:26!A C:G WC [cWW][XIX] 10.55 55.19; 53.13 2.06 -12.74 0.56 31.87
Riboswitch 3OWW 16!A:25!A C:G WC [cWW][XIX] 10.69 53.99; 52.45 1.54 -7.27 0.44 16.03
Riboswitch 3OWW 17!A:24!A G:C WC [cWW][XIX] 10.74 58.95; 49.65 9.3 -12.21 0.29 19.41
Riboswitch 3OWW 29!A:74!A G:C WC [cWW][XIX] 10.72 52.72; 54.23 1.51 -8.07 0.04 12.71
Riboswitch 3OWW 30!A:73!A C:G WC [cWW][XIX] 10.68 51.3; 56.0 4.71 -12.32 0.23 20.29
Riboswitch 3OWW 31!A:72!A C:G WC [cWW][XIX] 10.85 50.36; 53.44 3.08 -4.57 0.32 10.88
Riboswitch 3OWW 33!A:80!A A:G pfS(sb:O2*-N3) [---][-] 6.3 90.17; 141.59 51.42 -9.74 1.55 25.7
Riboswitch 3OWW 34!A:71!A A:A S [tSH][-] 9.78 6.68; 83.51 76.83 86.74 0.34 8.66
Riboswitch 3OWW 35!A:70!A G:C WC [cWW][XIX] 10.77 49.03; 53.66 4.63 9.02 0.15 7.92
Riboswitch 3OWW 36!A:68!A G:C WC [cWW][XIX] 10.76 52.21; 54.13 1.92 -8.6 0.29 15.07
Riboswitch 3OWW 37!A:67!A A:U WC [cWW][XX] 10.01 59.06; 63.13 4.07 -16.55 0.3 26.57
Riboswitch 3OWW 38!A:66!A G:C WC [cWW][XIX] 10.79 54.71; 50.58 4.13 -7.99 0.46 17.96
Riboswitch 3OWW 39!A:64!A C:A rH_1 [rWH][XXV] 11.14 25.36; 12.82 12.54 -103.05 1.08 22.27
Riboswitch 3OWW 40!A:6!B A:U rpS(sb:O2*-N3) [cSS][-] 5.49 97.53; 139.2 41.68 -71.4 0.21 40.76
Riboswitch 3OWW 40!A:62!A A:G S(bp:N1-O2P)_1 [---][-] 9.04 20.31; 77.74 57.43 130.02 2.1 13.15
Riboswitch 3OWW 41!A:84!B A:G rS [tSS][-] 8.0 56.94; 91.22 34.29 172.84 0.34 32.35
Riboswitch 3OWW 41!A:5!B A:C rpS(ss:O2*-O2*)_1 [cSS][-] 6.65 143.15; 100.82 42.33 -52.81 0.78 38.92
Riboswitch 3OWW 41!A:62!A A:G S [tSH][XI] 9.45 3.67; 97.96 94.29 -22.08 0.27 14.73
Riboswitch 3OWW 42!A:61!A G:U Wb [cWW][XXVIII] 10.66 43.64; 65.17 21.53 -5.43 0.5 16.52
Riboswitch 3OWW 43!A:60!A C:G WC [cWW][XIX] 10.65 49.85; 55.06 5.2 -10.33 0.83 24.96
Riboswitch 3OWW 44!A:59!A U:A WC [cWW][XX] 10.88 46.07; 51.59 5.52 -8.54 0.28 15.07
Riboswitch 3OWW 45!A:58!A C:G WC [cWW][XIX] 10.82 51.03; 45.66 5.37 -11.8 0.27 16.13
Riboswitch 3OWW 46!A:57!A U:A WC [cWW][XX] 10.49 54.36; 55.94 1.58 -9.25 0.16 13.2
Riboswitch 3OWW 47!A:56!A G:C WC [cWW][XIX] 10.7 55.6; 55.13 0.46 -8.08 0.25 16.47
Riboswitch 3OWW 48!A:55!A C:G WC [cWW][XIX] 10.63 56.76; 53.94 2.82 -7.63 0.18 16.67
Riboswitch 3OWW 49!A:54!A G:C WC [cWW][XIX] 10.64 54.28; 54.66 0.38 -3.22 0.22 7.21
Riboswitch 3OWW 50!A:53!A G:A S [tSH][XI] 9.6 94.14; 16.57 77.57 -100.37 0.49 22.5
Riboswitch 3OWW 50!A:52!A G:A S(sb:O2*-N7) [---][-] 7.6 85.13; 37.08 48.05 -165.83 2.21 36.25
Riboswitch 3OWW 63!A:83!B A:A rpS(sb:O2*-N3) [cSS][-] 5.69 100.62; 133.51 32.89 -78.15 0.0 47.35
Riboswitch 3OWW 64!A:7!B A:G rS [tSS][-] 8.13 51.24; 94.12 42.88 176.22 0.32 36.72
Riboswitch 3OWW 69!A:71!A U:A pS [cSH][-] 8.69 114.75; 24.4 90.35 42.97 2.27 12.65
Riboswitch 3OWW 83!A:63!B A:A rpS(sb:O2*-N3) [cSS][-] 5.75 134.35; 99.66 34.69 -76.54 0.4 46.21
Riboswitch 3OWW 84!A:41!B G:A rS [tSS][-] 7.93 91.24; 59.83 31.4 171.38 0.38 33.35
Riboswitch 3OWW 84!A:40!B G:A fS(sb:O2*-N6) [---][-] 8.63 106.69; 35.59 71.1 178.71 1.26 43.91
Riboswitch 3OWW 1!B:88!B G:C WC [cWW][XIX] 10.78 52.24; 51.17 1.07 4.86 0.25 13.93
Riboswitch 3OWW 2!B:87!B G:U Wb [cWW][XXVIII] 10.59 39.55; 64.5 24.95 -8.86 0.13 12.33
Riboswitch 3OWW 3!B:86!B C:G WC [cWW][XIX] 10.78 48.01; 56.15 8.14 -10.6 0.52 24.96
Riboswitch 3OWW 4!B:85!B U:A WC [cWW][XX] 10.65 52.32; 56.22 3.9 -5.37 0.11 8.95
Riboswitch 3OWW 5!B:84!B C:G WC [cWW][XIX] 10.67 55.5; 54.33 1.17 -4.92 0.0 14.64
Riboswitch 3OWW 6!B:83!B U:A WC [cWW][XX] 10.0 58.71; 61.2 2.49 -6.97 0.18 12.9
Riboswitch 3OWW 7!B:82!B G:C WC [cWW][XIX] 10.63 54.22; 53.6 0.62 -4.77 0.02 9.31
Riboswitch 3OWW 8!B:81!B G:A S [tSH][XI] 9.4 94.07; 8.88 85.19 -102.49 0.03 14.36
Riboswitch 3OWW 8!B:33!B G:A fS(sb:O2*-N1)_1 [---][-] 9.45 102.17; 40.09 62.08 168.7 2.12 19.79
Riboswitch 3OWW 9!B:80!B A:G S [tSH][XI] 9.33 16.6; 93.79 77.2 -97.64 0.33 24.09
Riboswitch 3OWW 10!B:31!B G:C rpS [cSS][-] 5.52 95.66; 154.78 59.12 -45.87 0.58 40.58
Riboswitch 3OWW 11!B:73!B A:G rS [tSS][-] 8.32 57.79; 85.41 27.62 155.16 1.09 34.97
Riboswitch 3OWW 11!B:30!B A:C rpS(bs:O2-O2*) [cSS][-] 5.58 150.65; 104.91 45.74 -36.69 1.53 14.33
Riboswitch 3OWW 12!B:28!B G:C WC [cWW][XIX] 10.52 54.5; 57.31 2.81 -4.54 0.21 10.77
Riboswitch 3OWW 14!B:27!B A:U WC [cWW][XX] 10.9 49.55; 50.64 1.09 -10.22 0.05 16.53
Riboswitch 3OWW 15!B:26!B C:G WC [cWW][XIX] 10.58 55.2; 52.87 2.33 -13.49 0.46 23.98
Riboswitch 3OWW 16!B:25!B C:G WC [cWW][XIX] 10.67 55.17; 52.55 2.62 -9.14 0.05 15.42
Riboswitch 3OWW 17!B:24!B G:C WC [cWW][XIX] 10.54 57.27; 53.32 3.95 -8.16 0.5 19.39
Riboswitch 3OWW 18!B:24!B U:C Wb* [---][-] 8.7 41.57; 78.04 36.47 -22.46 2.67 5.69
Riboswitch 3OWW 29!B:74!B G:C WC [cWW][XIX] 10.83 52.53; 49.87 2.66 -5.5 0.17 12.01
Riboswitch 3OWW 30!B:73!B C:G WC [cWW][XIX] 10.64 54.37; 54.39 0.02 -14.23 0.19 21.95
Riboswitch 3OWW 31!B:72!B C:G WC [cWW][XIX] 10.76 52.11; 51.89 0.21 -8.24 0.25 12.62
Riboswitch 3OWW 33!B:80!B A:G pfS(sb:O2*-N3) [---][-] 6.2 91.59; 143.81 52.22 -8.1 1.85 22.08
Riboswitch 3OWW 34!B:71!B A:A S [tSH][-] 9.68 4.47; 85.24 80.77 50.9 0.21 3.78
Riboswitch 3OWW 35!B:70!B G:C WC [cWW][XIX] 10.74 48.94; 52.65 3.71 7.46 0.03 8.51
Riboswitch 3OWW 36!B:68!B G:C WC [cWW][XIX] 10.74 52.89; 54.11 1.22 -9.63 0.49 19.09
Riboswitch 3OWW 37!B:67!B A:U WC [cWW][XX] 9.94 62.8; 63.25 0.45 -19.78 0.22 28.43
Riboswitch 3OWW 38!B:66!B G:C WC [cWW][XIX] 10.8 55.23; 51.04 4.19 -9.63 0.6 19.47
Riboswitch 3OWW 39!B:64!B C:A rH_1 [rWH][XXV] 11.03 24.86; 11.33 13.53 -111.35 0.17 15.89
Riboswitch 3OWW 40!B:62!B A:G S(bp:N1-O2P)_1 [---][-] 9.08 20.77; 75.46 54.69 136.4 2.09 12.87
Riboswitch 3OWW 41!B:62!B A:G S [tSH][XI] 9.5 6.69; 96.49 89.8 -31.82 0.06 13.02
Riboswitch 3OWW 42!B:61!B G:U Wb [cWW][XXVIII] 10.5 39.02; 67.79 28.77 1.16 0.1 10.29
Riboswitch 3OWW 43!B:60!B C:G WC [cWW][XIX] 10.67 54.31; 51.66 2.66 -8.42 0.4 20.75
Riboswitch 3OWW 44!B:59!B U:A WC [cWW][XX] 10.66 52.0; 56.81 4.82 -5.29 0.06 14.05
Riboswitch 3OWW 45!B:58!B C:G WC [cWW][XIX] 10.88 55.58; 52.66 2.93 -10.82 0.01 14.19
Riboswitch 3OWW 46!B:57!B U:A WC [cWW][XX] 10.75 53.66; 56.48 2.82 -8.93 0.18 11.84
Riboswitch 3OWW 47!B:56!B G:C WC [cWW][XIX] 10.79 54.17; 52.9 1.27 -5.27 0.25 10.64
Riboswitch 3OWW 48!B:55!B C:G WC [cWW][XIX] 10.65 54.0; 55.08 1.08 -5.96 0.21 10.72
Riboswitch 3OWW 49!B:54!B G:C WC [cWW][XIX] 10.74 55.99; 51.17 4.82 3.77 0.4 1.91
Riboswitch 3OWW 69!B:71!B U:A pS [cSH][-] 8.79 115.2; 23.97 91.23 49.56 1.83 12.42
Riboswitch 3OWW 69!B:70!B U:C pS [cSH][-] 6.99 139.86; 39.35 100.52 8.94 0.82 7.67