Identified Basepairs and Their Conformations and Conformational Parameters

PDB Id: 3OX0 BPC Identified: 89 Ambiguities: 0
RNA PDB Position bp bpC; LG [LW][Sanger] dCC <X ; <Y |<X - <Y| Torsion Z-Diff Buckle
Riboswitch 3OX0 1!A:88!A G:C WC [cWW][XIX] 11.16 51.32; 48.98 2.34 5.36 0.29 8.48
Riboswitch 3OX0 2!A:87!A G:U Wb [cWW][XXVIII] 10.87 45.83; 61.83 16.0 -5.39 0.33 12.02
Riboswitch 3OX0 3!A:86!A C:G WC [cWW][XIX] 10.78 51.26; 56.62 5.36 -4.11 0.12 26.0
Riboswitch 3OX0 4!A:85!A U:A WC [cWW][XX] 10.31 56.85; 58.49 1.63 -0.83 0.02 9.97
Riboswitch 3OX0 5!A:41!B C:A rpS(ss:O2*-O2*)_1 [cSS][-] 6.44 98.95; 150.68 51.73 -54.56 0.84 38.01
Riboswitch 3OX0 5!A:84!A C:G WC [cWW][XIX] 10.85 55.4; 54.54 0.86 -2.07 0.03 9.15
Riboswitch 3OX0 6!A:40!B U:A rpS(sb:O2*-N3) [cSS][-] 5.83 135.42; 98.41 37.01 -76.63 0.39 39.66
Riboswitch 3OX0 6!A:83!A U:A WC [cWW][XX] 10.06 59.6; 61.57 1.96 -6.25 0.05 15.17
Riboswitch 3OX0 7!A:64!B G:A rS [tSS][-] 8.08 94.45; 52.34 42.11 175.91 0.53 35.65
Riboswitch 3OX0 7!A:82!A G:C WC [cWW][XIX] 10.74 54.2; 53.8 0.4 -3.13 0.22 10.9
Riboswitch 3OX0 8!A:81!A G:A S [tSH][XI] 9.57 94.29; 8.44 85.85 -123.57 0.01 11.36
Riboswitch 3OX0 8!A:33!A G:A fS(sb:O2*-N1)_1 [---][-] 9.65 101.39; 39.8 61.59 168.24 2.38 17.24
Riboswitch 3OX0 9!A:80!A A:G S [tSH][XI] 9.46 15.74; 93.53 77.79 -107.0 0.27 21.56
Riboswitch 3OX0 10!A:31!A G:C rpS [cSS][-] 5.62 95.43; 157.69 62.26 -50.2 0.65 41.72
Riboswitch 3OX0 11!A:73!A A:G rS [tSS][-] 8.25 56.96; 88.56 31.6 156.8 0.64 32.26
Riboswitch 3OX0 11!A:30!A A:C rpS(bs:O2-O2*) [cSS][-] 5.59 151.06; 101.9 49.16 -36.8 1.08 16.42
Riboswitch 3OX0 12!A:28!A G:C WC [cWW][XIX] 10.67 58.74; 51.83 6.91 -6.82 0.06 9.95
Riboswitch 3OX0 14!A:27!A A:U WC [cWW][XX] 10.48 52.56; 58.44 5.88 -10.57 0.45 19.1
Riboswitch 3OX0 15!A:26!A C:G WC [cWW][XIX] 10.6 54.14; 49.52 4.62 -10.0 0.2 29.09
Riboswitch 3OX0 16!A:25!A C:G WC [cWW][XIX] 10.61 56.64; 50.92 5.72 -7.3 0.05 15.98
Riboswitch 3OX0 17!A:24!A G:C WC [cWW][XIX] 10.74 56.57; 50.1 6.47 -12.36 0.36 20.37
Riboswitch 3OX0 29!A:74!A G:C WC [cWW][XIX] 10.73 55.32; 53.46 1.86 -6.35 0.16 10.42
Riboswitch 3OX0 30!A:73!A C:G WC [cWW][XIX] 10.69 52.44; 57.66 5.22 -11.63 0.21 16.68
Riboswitch 3OX0 31!A:72!A C:G WC [cWW][XIX] 10.72 52.05; 53.69 1.64 -3.5 0.27 7.17
Riboswitch 3OX0 32!A:71!A G:A H*_2 [---][-] 11.81 40.31; 28.15 12.17 12.73 0.34 7.24
Riboswitch 3OX0 33!A:80!A A:G pfS(sb:O2*-N3) [---][-] 6.29 91.67; 141.55 49.88 -11.93 1.42 22.47
Riboswitch 3OX0 34!A:71!A A:A S [tSH][-] 9.75 4.28; 88.5 84.23 71.18 0.14 11.46
Riboswitch 3OX0 35!A:70!A G:C WC [cWW][XIX] 10.62 49.06; 55.96 6.9 -0.08 0.08 9.97
Riboswitch 3OX0 36!A:68!A G:C WC [cWW][XIX] 10.79 47.32; 55.07 7.75 -7.91 0.13 10.9
Riboswitch 3OX0 37!A:67!A A:U WC [cWW][XX] 10.27 56.3; 57.53 1.22 -16.52 0.13 23.04
Riboswitch 3OX0 38!A:66!A G:C WC [cWW][XIX] 10.69 55.79; 52.7 3.09 -9.8 0.28 14.95
Riboswitch 3OX0 39!A:64!A C:A rH_1 [rWH][XXV] 11.05 25.97; 13.35 12.62 -104.03 0.64 20.23
Riboswitch 3OX0 40!A:6!B A:U rpS(sb:O2*-N3) [cSS][-] 5.64 93.72; 140.48 46.76 -71.79 0.09 39.12
Riboswitch 3OX0 40!A:62!A A:G S(bp:N1-O2P)_1 [---][-] 9.06 22.28; 76.66 54.38 130.03 2.54 10.4
Riboswitch 3OX0 41!A:84!B A:G rS [tSS][-] 8.08 58.4; 88.35 29.95 173.73 0.19 32.32
Riboswitch 3OX0 41!A:5!B A:C rpS(ss:O2*-O2*)_1 [cSS][-] 6.52 146.43; 99.22 47.21 -54.19 0.64 37.18
Riboswitch 3OX0 41!A:62!A A:G S [tSH][XI] 9.47 6.18; 99.1 92.92 -21.86 0.36 16.45
Riboswitch 3OX0 42!A:61!A G:U Wb [cWW][XXVIII] 10.27 47.5; 69.35 21.85 -6.46 0.39 15.34
Riboswitch 3OX0 43!A:60!A C:G WC [cWW][XIX] 10.56 51.77; 53.32 1.55 -10.63 0.56 19.67
Riboswitch 3OX0 44!A:59!A U:A WC [cWW][XX] 11.11 41.36; 50.51 9.15 -2.6 0.2 8.35
Riboswitch 3OX0 45!A:58!A C:G WC [cWW][XIX] 10.96 50.01; 43.98 6.03 -10.12 0.35 15.31
Riboswitch 3OX0 46!A:57!A U:A WC [cWW][XX] 10.83 48.45; 52.99 4.54 -6.15 0.11 11.68
Riboswitch 3OX0 47!A:56!A G:C WC [cWW][XIX] 10.67 58.12; 55.43 2.69 -4.86 0.2 15.65
Riboswitch 3OX0 48!A:55!A C:G WC [cWW][XIX] 10.5 56.09; 55.58 0.51 -6.1 0.35 13.27
Riboswitch 3OX0 49!A:54!A G:C WC [cWW][XIX] 10.66 56.44; 53.01 3.43 -3.12 0.31 7.8
Riboswitch 3OX0 50!A:53!A G:A S [tSH][XI] 9.68 94.15; 13.77 80.38 -105.14 0.56 18.23
Riboswitch 3OX0 50!A:52!A G:A S(sb:O2*-N7) [---][-] 7.61 85.26; 35.58 49.68 -167.49 2.51 33.5
Riboswitch 3OX0 63!A:83!B A:A rpS(sb:O2*-N3) [cSS][-] 5.64 96.84; 133.22 36.38 -83.38 0.12 47.76
Riboswitch 3OX0 64!A:7!B A:G rS [tSS][-] 8.14 50.28; 93.45 43.17 174.72 0.31 39.86
Riboswitch 3OX0 83!A:63!B A:A rpS(sb:O2*-N3) [cSS][-] 5.62 136.32; 96.5 39.82 -78.69 0.52 48.28
Riboswitch 3OX0 84!A:41!B G:A rS [tSS][-] 7.85 89.1; 59.34 29.76 174.59 0.25 35.81
Riboswitch 3OX0 1!B:88!B G:C WC [cWW][XIX] 11.01 54.22; 46.23 7.99 5.27 0.06 11.63
Riboswitch 3OX0 2!B:87!B G:U Wb [cWW][XXVIII] 10.34 46.41; 71.26 24.85 -7.98 0.07 11.63
Riboswitch 3OX0 3!B:86!B C:G WC [cWW][XIX] 10.76 49.23; 57.28 8.05 -8.05 0.53 20.54
Riboswitch 3OX0 4!B:85!B U:A WC [cWW][XX] 10.68 52.94; 54.79 1.85 -6.28 0.08 14.24
Riboswitch 3OX0 5!B:84!B C:G WC [cWW][XIX] 10.83 54.05; 53.17 0.88 -3.0 0.05 12.28
Riboswitch 3OX0 6!B:83!B U:A WC [cWW][XX] 9.96 59.59; 62.25 2.66 -8.05 0.25 15.08
Riboswitch 3OX0 7!B:82!B G:C WC [cWW][XIX] 10.62 52.62; 55.94 3.32 -4.88 0.14 12.26
Riboswitch 3OX0 8!B:81!B G:A S [tSH][XI] 9.47 91.37; 9.46 81.9 -124.17 0.03 11.83
Riboswitch 3OX0 8!B:33!B G:A rS(sb:O2*-N1)_2 [---][-] 9.32 98.11; 41.38 56.73 169.2 1.88 18.93
Riboswitch 3OX0 9!B:80!B A:G S [tSH][XI] 9.48 16.26; 93.62 77.36 -97.73 0.46 21.48
Riboswitch 3OX0 10!B:31!B G:C rpS [cSS][-] 5.39 94.46; 158.5 64.04 -48.66 0.77 45.83
Riboswitch 3OX0 11!B:73!B A:G rS [tSS][-] 8.37 58.02; 82.52 24.5 155.07 1.03 35.97
Riboswitch 3OX0 11!B:30!B A:C rpS(bs:O2-O2*) [cSS][-] 5.42 152.22; 101.66 50.56 -37.39 2.35 15.11
Riboswitch 3OX0 12!B:28!B G:C WC [cWW][XIX] 10.49 54.42; 55.88 1.46 -0.81 0.59 7.75
Riboswitch 3OX0 14!B:27!B A:U WC [cWW][XX] 10.8 51.55; 49.86 1.7 -10.27 0.17 14.92
Riboswitch 3OX0 15!B:26!B C:G WC [cWW][XIX] 10.59 53.3; 52.28 1.02 -12.28 0.35 23.21
Riboswitch 3OX0 16!B:25!B C:G WC [cWW][XIX] 10.7 53.41; 53.1 0.3 -5.38 0.29 13.61
Riboswitch 3OX0 17!B:24!B G:C WC [cWW][XIX] 10.55 57.11; 54.22 2.9 -6.07 0.35 15.03
Riboswitch 3OX0 29!B:74!B G:C WC [cWW][XIX] 10.77 53.25; 51.85 1.4 -3.22 0.02 9.55
Riboswitch 3OX0 30!B:73!B C:G WC [cWW][XIX] 10.7 51.34; 52.82 1.47 -13.57 0.25 27.16
Riboswitch 3OX0 31!B:72!B C:G WC [cWW][XIX] 10.72 54.15; 51.2 2.95 -6.18 0.26 11.97
Riboswitch 3OX0 33!B:80!B A:G pfS(sb:O2*-N3) [---][-] 6.02 95.18; 142.3 47.11 -11.24 2.0 18.95
Riboswitch 3OX0 34!B:71!B A:A S [tSH][-] 9.78 4.12; 84.31 80.19 21.13 0.4 6.22
Riboswitch 3OX0 35!B:70!B G:C WC [cWW][XIX] 10.57 54.47; 53.99 0.48 4.41 0.0 6.67
Riboswitch 3OX0 36!B:68!B G:C WC [cWW][XIX] 10.78 50.86; 52.15 1.29 -8.63 0.29 12.74
Riboswitch 3OX0 37!B:67!B A:U WC [cWW][XX] 10.31 58.81; 57.17 1.63 -14.02 0.27 22.52
Riboswitch 3OX0 38!B:66!B G:C WC [cWW][XIX] 10.52 55.03; 56.07 1.04 -9.12 0.19 13.73
Riboswitch 3OX0 39!B:64!B C:A rH_1 [rWH][XXV] 11.09 25.84; 11.87 13.97 -99.87 0.62 19.42
Riboswitch 3OX0 40!B:62!B A:G S(bp:N1-O2P)_1 [---][-] 9.19 18.36; 73.68 55.32 125.04 1.96 16.67
Riboswitch 3OX0 41!B:62!B A:G S [tSH][XI] 9.51 6.06; 97.43 91.37 -23.0 0.4 16.62
Riboswitch 3OX0 42!B:61!B G:U Wb [cWW][XXVIII] 10.49 39.9; 66.91 27.0 -0.32 0.4 9.53
Riboswitch 3OX0 43!B:60!B C:G WC [cWW][XIX] 10.69 52.63; 54.19 1.56 -6.25 0.25 22.54
Riboswitch 3OX0 44!B:59!B U:A WC [cWW][XX] 10.83 52.76; 54.66 1.9 -4.1 0.13 14.3
Riboswitch 3OX0 45!B:58!B C:G WC [cWW][XIX] 10.9 54.65; 57.22 2.57 -12.24 0.24 14.65
Riboswitch 3OX0 46!B:57!B U:A WC [cWW][XX] 10.81 55.91; 53.18 2.73 -10.82 0.25 12.79
Riboswitch 3OX0 47!B:56!B G:C WC [cWW][XIX] 10.74 52.64; 56.26 3.62 -4.0 0.19 7.43
Riboswitch 3OX0 48!B:55!B C:G WC [cWW][XIX] 10.62 53.25; 56.17 2.92 -3.38 0.0 6.15
Riboswitch 3OX0 49!B:54!B G:C WC [cWW][XIX] 10.63 53.48; 54.43 0.95 2.62 0.57 3.24