Identified Basepairs and Their Conformations and Conformational Parameters

PDB Id: 3P22 BPC Identified: 124 Ambiguities: 1
RNA PDB Position bp bpC; LG [LW][Sanger] dCC <X ; <Y |<X - <Y| Torsion Z-Diff Buckle
PAN_RNA 3P22 1!A:40!A G:C WC [cWW][XIX] 10.67 53.03; 56.95 3.92 -5.15 0.2 12.84
PAN_RNA 3P22 2!A:39!A G:U Wb [cWW][XXVIII] 10.33 43.96; 67.56 23.6 -7.68 0.08 15.43
PAN_RNA 3P22 3!A:38!A C:G WC [cWW][XIX] 10.48 52.32; 56.04 3.72 -10.53 0.09 18.22
PAN_RNA 3P22 4!A:37!A U:A WC [cWW][XX] 10.53 52.54; 54.28 1.74 -10.32 0.02 10.66
PAN_RNA 3P22 5!A:36!A G:C WC [cWW][XIX] 10.62 51.71; 53.19 1.48 -8.6 0.08 13.32
PAN_RNA 3P22 6!A:35!A G:C WC [cWW][XIX] 10.72 54.34; 52.74 1.6 -9.42 0.13 15.12
PAN_RNA 3P22 7!A:4!B G:A rS [tSS][-] 8.18 84.17; 61.37 22.8 157.31 1.04 32.93
PAN_RNA 3P22 7!A:34!A G:C WC [cWW][XIX] 10.66 53.11; 54.81 1.7 -7.58 0.17 16.09
PAN_RNA 3P22 8!A:5!B U:A H_1 [cWH][XXIII] 8.6 60.11; 46.68 13.43 0.46 0.41 8.45
PAN_RNA 3P22 9!A:6!B U:A H_1 [cWH][XXIII] 8.23 62.94; 51.28 11.66 -1.35 0.05 8.33
PAN_RNA 3P22 10!A:7!B U:A H_1 [cWH][XXIII] 8.07 63.59; 52.89 10.71 2.45 0.07 7.96
PAN_RNA 3P22 11!A:8!B U:A H_1 [cWH][XXIII] 8.31 59.52; 52.54 6.98 4.32 0.18 17.45
PAN_RNA 3P22 12!A:9!B U:A H_1 [cWH][XXIII] 7.9 65.28; 56.31 8.97 3.05 0.66 20.49
PAN_RNA 3P22 13!A:26!A C:G WC [cWW][XIX] 10.86 50.1; 53.19 3.09 -15.36 0.3 22.67
PAN_RNA 3P22 14!A:25!A C:G WC [cWW][XIX] 10.6 49.9; 53.1 3.2 -11.74 0.47 21.88
PAN_RNA 3P22 15!A:24!A U:A WC [cWW][XX] 10.56 53.95; 54.33 0.38 -5.68 0.33 12.12
PAN_RNA 3P22 16!A:23!A U:A WC [cWW][XX] 10.36 55.28; 57.82 2.54 -0.66 0.38 11.47
PAN_RNA 3P22 17!A:21!C C:A rpS(sb:O2*-N3) [cSS][-] 6.09 135.8; 88.71 47.09 -11.36 1.96 6.56
PAN_RNA 3P22 17!A:22!A C:G WC [cWW][XIX] 10.78 54.32; 51.82 2.5 12.41 0.19 14.72
PAN_RNA 3P22 18!A:21!A G:A S [tSH][XI] 9.0 103.17; 12.55 90.62 -76.66 0.2 25.03
PAN_RNA 3P22 18!A:20!A G:A S(sb:O2*-N7) [---][-] 7.64 92.4; 30.64 61.76 -166.52 2.04 31.17
PAN_RNA 3P22 19!A:19!C A:A rS* [tHH][-] 10.82 19.65; 20.0 0.35 -60.85 0.91 30.01
PAN_RNA 3P22 20!A:18!C A:G pfS(sb:O2*-N6) [---][-] 9.71 31.18; 160.54 129.35 170.88 0.23 10.78
PAN_RNA 3P22 21!A:21!C A:A rWb* [tWW][I] 13.78 28.53; 21.97 6.56 157.43 0.21 11.65
PAN_RNA 3P22 21!A:17!C A:C rpS(sb:O2*-N3) [cSS][-] 5.49 93.6; 143.61 50.01 -13.74 2.26 11.5
PAN_RNA 3P22 22!A:22!C G:G rS [tSS][IV] 8.32 79.89; 77.94 1.95 -162.66 0.73 14.44
PAN_RNA 3P22 23!A:23!C A:A rS(ss:O2*-O2*) [---][-] 5.49 152.39; 148.03 4.37 -94.91 2.35 28.9
PAN_RNA 3P22 27!A:9!B U:A WC [cWW][XX] 10.27 57.05; 54.04 3.01 -1.6 0.3 10.73
PAN_RNA 3P22 28!A:8!B U:A WC [cWW][XX] 10.49 52.62; 57.75 5.13 -3.48 0.36 17.43
PAN_RNA 3P22 29!A:7!B U:A WC [cWW][XX] 10.33 56.36; 55.68 0.68 -4.94 0.21 8.16
PAN_RNA 3P22 30!A:6!B U:A WC [cWW][XX] 10.39 55.48; 57.37 1.89 -5.13 0.38 3.14
PAN_RNA 3P22 31!A:5!B U:A WC [cWW][XX] 10.25 58.26; 60.56 2.3 2.54 0.4 12.85
PAN_RNA 3P22 34!A:4!B C:A rpS(bs:O2-O2*) [cSS][-] 5.61 103.95; 155.07 51.12 -38.69 0.92 18.01
PAN_RNA 3P22 35!A:3!B C:A rpS(sb:O2*-N3) [cSS][-] 5.48 157.35; 95.44 61.9 -39.15 0.03 28.11
PAN_RNA 3P22 1!C:40!C G:C WC [cWW][XIX] 10.63 51.93; 57.87 5.94 -8.08 0.37 15.24
PAN_RNA 3P22 2!C:39!C G:U Wb [cWW][XXVIII] 10.32 44.55; 70.3 25.74 -5.58 0.03 13.64
PAN_RNA 3P22 3!C:38!C C:G WC [cWW][XIX] 10.54 51.57; 52.5 0.93 -14.88 0.14 21.1
PAN_RNA 3P22 4!C:37!C U:A WC [cWW][XX] 10.65 52.02; 52.28 0.26 -10.21 0.22 14.92
PAN_RNA 3P22 5!C:36!C G:C WC [cWW][XIX] 10.87 54.16; 50.76 3.4 -2.17 0.18 11.2
PAN_RNA 3P22 6!C:1!D G:A S [tSH][XI] 10.71 84.64; 19.52 65.12 138.75 0.73 28.74
PAN_RNA 3P22 6!C:35!C G:C WC [cWW][XIX] 10.54 55.02; 54.18 0.84 -2.22 0.12 13.2
PAN_RNA 3P22 7!C:3!D G:A rS [tSS][-] 8.04 92.76; 55.51 37.25 152.88 0.57 39.14
PAN_RNA 3P22 7!C:34!C G:C WC [cWW][XIX] 10.44 60.56; 57.51 3.05 -7.23 0.46 14.45
PAN_RNA 3P22 8!C:4!D U:A H_1 [cWH][XXIII] 8.62 58.5; 49.91 8.59 -3.77 0.04 10.68
PAN_RNA 3P22 9!C:5!D U:A H_1 [cWH][XXIII] 7.95 62.8; 56.87 5.93 0.03 0.09 5.62
PAN_RNA 3P22 10!C:6!D U:A H_1 [cWH][XXIII] 8.32 62.99; 53.37 9.62 -0.07 0.39 8.34
PAN_RNA 3P22 11!C:7!D U:A H_1 [cWH][XXIII] 8.28 61.51; 53.14 8.37 2.88 0.37 11.06
PAN_RNA 3P22 12!C:8!D U:A H_1 [cWH][XXIII] 7.77 67.45; 57.16 10.29 1.47 0.52 24.53
PAN_RNA 3P22 13!C:26!C C:G WC [cWW][XIX] 10.66 50.41; 55.98 5.57 -14.46 0.34 24.6
PAN_RNA 3P22 14!C:25!C C:G WC [cWW][XIX] 10.67 52.19; 56.1 3.91 -13.79 0.11 23.13
PAN_RNA 3P22 15!C:24!C U:A WC [cWW][XX] 10.75 52.97; 56.26 3.29 -14.27 0.66 25.03
PAN_RNA 3P22 16!C:23!C U:A WC [cWW][XX] 10.7 54.21; 53.46 0.75 -3.63 0.19 1.41
PAN_RNA 3P22 17!C:22!C C:G WC [cWW][XIX] 10.54 57.88; 52.15 5.73 10.39 0.29 14.53
PAN_RNA 3P22 18!C:21!C G:A S [tSH][XI] 9.04 100.07; 14.02 86.05 -95.13 0.17 28.19
PAN_RNA 3P22 18!C:20!C G:A S(sb:O2*-N7) [---][-] 7.67 88.95; 29.79 59.16 -166.75 2.45 34.6
PAN_RNA 3P22 27!C:8!D U:A WC [cWW][XX] 10.88 53.13; 49.93 3.2 -0.02 0.29 7.72
PAN_RNA 3P22 28!C:7!D U:A WC [cWW][XX] 10.42 57.99; 51.71 6.28 -6.29 0.74 18.29
PAN_RNA 3P22 29!C:6!D U:A WC [cWW][XX] 10.66 52.38; 51.56 0.82 -2.22 0.39 16.01
PAN_RNA 3P22 30!C:5!D U:A WC [cWW][XX] 10.34 55.71; 52.99 2.72 -4.67 0.21 9.81
PAN_RNA 3P22 31!C:4!D U:A WC [cWW][XX] 10.12 58.7; 57.81 0.89 10.13 0.65 20.41
PAN_RNA 3P22 34!C:3!D C:A rpS(bs:O2-O2*) [cSS][-] 5.67 107.21; 147.93 40.72 -29.18 0.77 28.37
PAN_RNA 3P22 35!C:3!D C:A rS [tSS][-] 3.9 119.85; 105.19 14.67 100.93 0.16 35.14
PAN_RNA 3P22 1!E:40!E G:C WC [cWW][XIX] 10.7 52.8; 56.45 3.65 -1.15 0.11 10.72
PAN_RNA 3P22 2!E:39!E G:U Wb [cWW][XXVIII] 10.36 43.02; 68.1 25.08 -6.9 0.25 13.87
PAN_RNA 3P22 3!E:38!E C:G WC [cWW][XIX] 10.47 51.63; 55.62 3.99 -9.51 0.09 13.99
PAN_RNA 3P22 4!E:37!E U:A WC [cWW][XX] 10.51 51.98; 53.98 1.99 -9.3 0.01 11.92
PAN_RNA 3P22 5!E:36!E G:C WC [cWW][XIX] 10.63 52.18; 51.84 0.34 -8.25 0.1 12.6
PAN_RNA 3P22 6!E:35!E G:C WC [cWW][XIX] 10.73 54.37; 53.44 0.92 -9.75 0.22 15.05
PAN_RNA 3P22 7!E:4!F G:A rS [tSS][-] 8.18 84.66; 60.83 23.82 157.04 1.11 33.62
PAN_RNA 3P22 7!E:34!E G:C WC [cWW][XIX] 10.71 53.34; 54.13 0.79 -7.2 0.15 16.72
PAN_RNA 3P22 8!E:5!F U:A H_1 [cWH][XXIII] 8.59 60.53; 48.11 12.42 -0.07 0.37 7.17
PAN_RNA 3P22 9!E:6!F U:A H_1 [cWH][XXIII] 8.23 64.22; 51.78 12.43 -2.51 0.07 8.77
PAN_RNA 3P22 10!E:7!F U:A H_1 [cWH][XXIII] 8.06 64.94; 53.84 11.09 0.77 0.16 8.6
PAN_RNA 3P22 11!E:8!F U:A H_1 [cWH][XXIII] 8.37 60.48; 52.41 8.06 3.55 0.17 19.43
PAN_RNA 3P22 12!E:9!F U:A H_1 [cWH][XXIII] 7.91 67.08; 55.55 11.54 2.2 0.73 19.55
PAN_RNA 3P22 13!E:26!E C:G WC [cWW][XIX] 10.87 50.64; 53.31 2.68 -14.19 0.36 23.37
PAN_RNA 3P22 14!E:25!E C:G WC [cWW][XIX] 10.63 50.0; 53.59 3.59 -10.3 0.39 19.96
PAN_RNA 3P22 15!E:24!E U:A WC [cWW][XX] 10.6 53.58; 54.16 0.58 -5.99 0.37 11.62
PAN_RNA 3P22 16!E:23!E U:A WC [cWW][XX] 10.39 54.43; 58.38 3.96 0.41 0.5 11.98
PAN_RNA 3P22 17!E:21!G* C:A pfS(sb:O2*-N3) [---][-]; rpS(sb:O2*-N3) [cSS][-] 5.76 137.98; 88.43 49.55 -14.33 1.95 7.18
PAN_RNA 3P22 17!E:22!E C:G WC [cWW][XIX] 10.79 54.57; 51.81 2.76 12.8 0.4 16.58
PAN_RNA 3P22 18!E:21!E G:A S [tSH][XI] 9.02 103.32; 11.94 91.38 -80.04 0.23 26.72
PAN_RNA 3P22 18!E:20!E G:A S(sb:O2*-N7) [---][-] 7.64 91.98; 30.95 61.03 -167.35 2.1 33.35
PAN_RNA 3P22 19!E:19!G A:A rS* [tHH][-] 10.81 20.74; 20.13 0.61 -63.2 0.92 30.24
PAN_RNA 3P22 20!E:18!G A:G pfS(sb:O2*-N6) [---][-] 9.9 29.73; 162.41 132.68 170.98 0.3 10.01
PAN_RNA 3P22 21!E:21!G A:A rWb* [tWW][I] 13.86 26.53; 23.1 3.43 155.33 0.18 13.11
PAN_RNA 3P22 21!E:17!G A:C rpS(sb:O2*-N3) [cSS][-] 5.78 91.28; 143.45 52.17 -11.1 2.23 9.36
PAN_RNA 3P22 22!E:22!G G:G rS [tSS][IV] 8.48 78.27; 78.26 0.02 -164.07 0.65 13.91
PAN_RNA 3P22 23!E:23!G A:A rS(ss:O2*-O2*) [---][-] 5.43 151.66; 145.88 5.78 -100.18 2.35 30.17
PAN_RNA 3P22 27!E:9!F U:A WC [cWW][XX] 10.49 57.37; 52.91 4.47 -0.79 0.39 9.41
PAN_RNA 3P22 28!E:8!F U:A WC [cWW][XX] 10.61 53.4; 56.37 2.97 -3.78 0.2 15.47
PAN_RNA 3P22 29!E:7!F U:A WC [cWW][XX] 10.46 56.77; 53.68 3.09 -4.87 0.17 7.54
PAN_RNA 3P22 30!E:6!F U:A WC [cWW][XX] 10.48 55.29; 56.12 0.83 -4.24 0.39 2.66
PAN_RNA 3P22 31!E:5!F U:A WC [cWW][XX] 10.37 58.8; 58.27 0.53 2.0 0.33 12.2
PAN_RNA 3P22 34!E:4!F C:A rpS(bs:O2-O2*) [cSS][-] 5.68 102.97; 154.87 51.9 -36.43 0.94 17.99
PAN_RNA 3P22 35!E:3!F C:A rpS(sb:O2*-N3) [cSS][-] 5.5 157.82; 94.7 63.12 -34.81 0.17 30.25
PAN_RNA 3P22 1!G:40!G G:C WC [cWW][XIX] 10.67 51.43; 56.72 5.29 -7.42 0.04 17.72
PAN_RNA 3P22 2!G:39!G G:U Wb [cWW][XXVIII] 10.35 44.15; 69.36 25.2 -7.78 0.01 13.58
PAN_RNA 3P22 3!G:38!G C:G WC [cWW][XIX] 10.54 51.7; 52.54 0.84 -15.48 0.2 24.98
PAN_RNA 3P22 4!G:37!G U:A WC [cWW][XX] 10.65 52.58; 52.44 0.14 -9.94 0.15 15.11
PAN_RNA 3P22 5!G:36!G G:C WC [cWW][XIX] 10.85 54.26; 50.74 3.52 -2.75 0.17 8.56
PAN_RNA 3P22 6!G:1!H G:A S [tSH][XI] 10.6 84.54; 19.31 65.23 139.47 0.81 28.49
PAN_RNA 3P22 6!G:35!G G:C WC [cWW][XIX] 10.55 54.98; 53.76 1.21 -2.11 0.0 11.47
PAN_RNA 3P22 7!G:3!H G:A rS [tSS][-] 8.0 92.65; 55.01 37.64 153.25 0.51 39.04
PAN_RNA 3P22 7!G:34!G G:C WC [cWW][XIX] 10.43 60.76; 57.81 2.96 -6.77 0.56 16.09
PAN_RNA 3P22 8!G:4!H U:A H_1 [cWH][XXIII] 8.62 59.01; 48.79 10.22 -4.08 0.16 10.86
PAN_RNA 3P22 9!G:5!H U:A H_1 [cWH][XXIII] 7.9 63.26; 56.66 6.6 0.2 0.05 7.43
PAN_RNA 3P22 10!G:6!H U:A H_1 [cWH][XXIII] 8.19 64.1; 52.83 11.27 1.44 0.33 9.15
PAN_RNA 3P22 11!G:7!H U:A H_1 [cWH][XXIII] 8.09 62.25; 53.21 9.03 5.91 0.07 10.19
PAN_RNA 3P22 12!G:8!H U:A H_1 [cWH][XXIII] 7.55 67.26; 58.13 9.14 2.38 0.36 24.61
PAN_RNA 3P22 13!G:26!G C:G WC [cWW][XIX] 10.62 50.35; 56.06 5.71 -14.47 0.31 23.46
PAN_RNA 3P22 14!G:25!G C:G WC [cWW][XIX] 10.66 51.96; 56.1 4.14 -14.06 0.15 23.23
PAN_RNA 3P22 15!G:24!G U:A WC [cWW][XX] 10.75 53.03; 56.49 3.46 -15.9 0.49 27.56
PAN_RNA 3P22 16!G:23!G U:A WC [cWW][XX] 10.72 54.01; 52.24 1.78 -4.4 0.24 2.04
PAN_RNA 3P22 17!G:22!G C:G WC [cWW][XIX] 10.6 57.48; 52.01 5.47 9.78 0.14 13.51
PAN_RNA 3P22 18!!G:21!G G:A S [tSH][XI] 9.05 99.77; 14.94 84.83 -94.56 0.06 27.95
PAN_RNA 3P22 18!G:20!G G:A S(sb:O2*-N7) [---][-] 7.64 88.77; 30.54 58.23 -164.6 2.23 34.5
PAN_RNA 3P22 27!G:8!H U:A WC [cWW][XX] 10.88 51.88; 50.16 1.72 -0.8 0.33 9.97
PAN_RNA 3P22 28!G:7!H U:A WC [cWW][XX] 10.52 56.88; 52.15 4.73 -7.17 0.76 19.64
PAN_RNA 3P22 29!G:6!H U:A WC [cWW][XX] 10.79 51.95; 51.8 0.15 -2.82 0.59 17.41
PAN_RNA 3P22 30!G:5!H U:A WC [cWW][XX] 10.43 55.19; 52.85 2.33 -3.52 0.29 9.88
PAN_RNA 3P22 31!G:4!H U:A WC [cWW][XX] 10.15 58.76; 58.55 0.2 10.88 0.79 22.67
PAN_RNA 3P22 34!G:3!H C:A rpS(bs:O2-O2*) [cSS][-] 5.62 107.12; 148.2 41.08 -29.01 1.05 27.6
PAN_RNA 3P22 35!G:3!H C:A rS [tSS][-] 3.87 119.42; 105.37 14.04 99.93 0.18 36.79