Identified Basepairs and Their Conformations and Conformational Parameters
| RNA |
PDB |
Position |
bp |
bpC; LG [LW][Sanger] |
dCC |
<X ; <Y |
|<X - <Y| |
Torsion |
Z-Diff |
Buckle |
PDB Id: 402D
BPC Identified: 8
Ambiguities: 0
| dsRNA |
402D |
101!A:116!B |
C:G |
WC [cWW][XIX] |
10.58 |
55.7; 54.58 |
1.12 |
-9.0 |
0.11 |
11.42 |
| dsRNA |
402D |
102!A:115!B |
G:C |
WC [cWW][XIX] |
10.5 |
55.4; 57.59 |
2.18 |
-5.59 |
0.27 |
13.52 |
| dsRNA |
402D |
103!A:114!B |
C:G |
WC [cWW][XIX] |
10.34 |
56.36; 56.67 |
0.31 |
-3.17 |
0.05 |
12.63 |
| dsRNA |
402D |
104!A:113!B |
C:A |
sWb [---][-] |
10.5 |
82.62; 39.13 |
43.5 |
-3.89 |
0.24 |
18.52 |
| dsRNA |
402D |
105!A:112!B |
A:C |
Wb [cWW][-] |
10.37 |
38.28; 78.59 |
40.31 |
-0.75 |
0.37 |
10.84 |
| dsRNA |
402D |
106!A:111!B |
G:C |
WC [cWW][XIX] |
10.61 |
55.96; 55.19 |
0.77 |
-5.3 |
0.02 |
22.31 |
| dsRNA |
402D |
107!A:110!B |
C:G |
WC [cWW][XIX] |
10.47 |
57.82; 54.36 |
3.46 |
-11.8 |
0.12 |
17.44 |
| dsRNA |
402D |
108!A:109!B |
G:C |
WC [cWW][XIX] |
10.55 |
56.85; 50.21 |
6.64 |
-6.95 |
0.16 |
12.84 |