Identified Basepairs and Their Conformations and Conformational Parameters
| RNA |
PDB |
Position |
bp |
bpC; LG [LW][Sanger] |
dCC |
<X ; <Y |
|<X - <Y| |
Torsion |
Z-Diff |
Buckle |
PDB Id: 413D
BPC Identified: 12
Ambiguities: 0
| dsRNA |
413D |
2!A:13!B |
G:C |
WC |
10.56 |
53.61; 56.54 |
2.93 |
0.65 |
0.06 |
7.65 |
| dsRNA |
413D |
3!A:12!B |
A:U |
WC |
10.1 |
58.93; 59.17 |
0.24 |
-8.91 |
0.11 |
12.69 |
| dsRNA |
413D |
4!A:11!B |
G:C |
WC |
10.63 |
54.19; 56.12 |
1.93 |
-3.25 |
0.04 |
4.1 |
| dsRNA |
413D |
5!A:10!B |
C:G |
WC |
10.57 |
56.03; 52.87 |
3.16 |
0.42 |
0.13 |
9.46 |
| dsRNA |
413D |
6!A:9!B |
U:G |
W!B |
10.45 |
70.0; 42.83 |
27.16 |
3.51 |
0.33 |
5.74 |
| dsRNA |
413D |
7!A:8!B |
U:C |
WC |
11.84 |
33.89; 41.04 |
7.15 |
10.1 |
0.51 |
15.07 |
| dsRNA |
413D |
8!A:7!B |
C:U |
WC |
11.84 |
41.04; 33.89 |
7.15 |
10.1 |
0.51 |
15.07 |
| dsRNA |
413D |
9!A:6!B |
G:U |
W!B |
10.45 |
42.83; 70.0 |
27.16 |
3.51 |
0.33 |
5.74 |
| dsRNA |
413D |
10!A:5!B |
G:C |
WC |
10.57 |
52.87; 56.03 |
3.16 |
0.42 |
0.13 |
9.46 |
| dsRNA |
413D |
11!A:4!B |
C:G |
WC |
10.63 |
56.12; 54.19 |
1.93 |
-3.25 |
0.04 |
4.1 |
| dsRNA |
413D |
12!A:3!B |
U:A |
WC |
10.1 |
59.17; 58.93 |
0.24 |
-8.91 |
0.11 |
12.69 |
| dsRNA |
413D |
13!A:2!B |
C:G |
WC |
10.56 |
56.54; 53.61 |
2.93 |
0.65 |
0.06 |
7.65 |