Identified Basepairs and Their Conformations and Conformational Parameters
| RNA |
PDB |
Position |
bp |
bpC; LG [LW][Sanger] |
dCC |
<X ; <Y |
|<X - <Y| |
Torsion |
Z-Diff |
Buckle |
PDB Id: 419D
BPC Identified: 13
Ambiguities: 0
| dsRNA |
419D |
1!A:14!B |
G:C |
Wb [---][-] |
10.52 |
49.07; 62.09 |
13.02 |
-10.34 |
0.58 |
18.05 |
| dsRNA |
419D |
2!A:13!B |
U:A |
WC [cWW][XX] |
10.42 |
56.81; 56.79 |
0.03 |
-15.08 |
0.49 |
13.37 |
| dsRNA |
419D |
3!A:12!B |
A:U |
WC [cWW][XX] |
10.56 |
58.74; 57.28 |
1.46 |
-8.48 |
0.17 |
12.38 |
| dsRNA |
419D |
4!A:11!B |
U:A |
WC [cWW][XX] |
10.49 |
58.92; 56.66 |
2.26 |
-9.17 |
0.19 |
13.49 |
| dsRNA |
419D |
5!A:10!B |
A:U |
WC [cWW][XX] |
10.53 |
61.48; 54.73 |
6.74 |
-17.9 |
0.15 |
21.28 |
| dsRNA |
419D |
6!A:9!B |
C:G |
WC [cWW][XIX] |
10.69 |
57.19; 53.86 |
3.32 |
-19.54 |
0.24 |
20.78 |
| dsRNA |
419D |
15!B:27!D |
A:A |
pfS(sb:O2*-N1) [---][-] |
10.13 |
37.11; 131.57 |
94.46 |
-40.24 |
1.95 |
42.29 |
| dsRNA |
419D |
17!C:30!D |
G:C |
WC [cWW][XIX] |
10.63 |
53.72; 56.49 |
2.77 |
-12.05 |
0.53 |
8.06 |
| dsRNA |
419D |
18!C:29!D |
U:A |
WC [cWW][XX] |
10.49 |
58.64; 56.75 |
1.9 |
-8.77 |
0.24 |
10.53 |
| dsRNA |
419D |
19!C:28!D |
A:U |
WC [cWW][XX] |
10.52 |
55.57; 58.49 |
2.93 |
-9.46 |
0.03 |
10.81 |
| dsRNA |
419D |
20!C:27!D |
U:A |
WC [cWW][XX] |
10.59 |
56.72; 53.5 |
3.22 |
-10.68 |
0.14 |
17.61 |
| dsRNA |
419D |
21!C:26!D |
A:U |
WC [cWW][XX] |
10.63 |
60.1; 52.19 |
7.92 |
-20.05 |
0.13 |
27.06 |
| dsRNA |
419D |
22!C:25!D |
C:G |
WC [cWW][XIX] |
10.63 |
55.73; 54.29 |
1.44 |
-19.2 |
0.1 |
22.15 |