Identified Basepairs and Their Conformations and Conformational Parameters
RNA |
PDB |
Position |
bp |
bpC; LG [LW][Sanger] |
dCC |
<X ; <Y |
|<X - <Y| |
Torsion |
Z-Diff |
Buckle |
PDB Id: 434D
BPC Identified: 14
Ambiguities: 0
tRNA |
434D |
1!A:14!B |
U:A |
WC [cWW][XX] |
10.57 |
56.0; 56.42 |
0.42 |
-2.92 |
0.19 |
6.34 |
tRNA |
434D |
2!A:13!B |
A:U |
WC [cWW][XX] |
10.35 |
58.05; 58.2 |
0.15 |
-9.05 |
0.02 |
13.12 |
tRNA |
434D |
3!A:12!B |
G:C |
WC [cWW][XIX] |
10.74 |
50.58; 52.18 |
1.6 |
-5.79 |
0.02 |
9.12 |
tRNA |
434D |
4!A:11!B |
C:G |
WC [cWW][XIX] |
10.61 |
57.84; 54.27 |
3.58 |
-5.42 |
0.04 |
11.34 |
tRNA |
434D |
5!A:10!B |
U:G |
Wb [cWW][XXVIII] |
10.68 |
70.2; 39.54 |
30.66 |
-8.6 |
0.38 |
10.83 |
tRNA |
434D |
6!A:9!B |
C:G |
WC [cWW][XIX] |
10.5 |
56.55; 55.57 |
0.98 |
-7.0 |
0.06 |
10.69 |
tRNA |
434D |
7!A:8!B |
C:G |
WC [cWW][XIX] |
10.57 |
57.93; 56.29 |
1.64 |
-0.19 |
0.01 |
5.94 |
tRNA |
434D |
1!C:14!D |
U:A |
WC [cWW][XX] |
10.62 |
54.52; 56.47 |
1.95 |
-3.26 |
0.03 |
4.5 |
tRNA |
434D |
2!C:13!D |
A:U |
WC [cWW][XX] |
10.32 |
58.66; 61.25 |
2.59 |
-7.94 |
0.02 |
10.82 |
tRNA |
434D |
3!C:12!D |
G:C |
WC [cWW][XIX] |
10.5 |
61.39; 63.05 |
1.66 |
-10.7 |
0.05 |
15.87 |
tRNA |
434D |
4!C:11!D |
C:G |
WC [cWW][XIX] |
10.67 |
56.71; 54.6 |
2.11 |
-5.2 |
0.02 |
7.31 |
tRNA |
434D |
5!C:10!D |
U:G |
Wb [cWW][XXVIII] |
10.31 |
71.5; 47.08 |
24.42 |
-9.44 |
0.54 |
13.9 |
tRNA |
434D |
6!C:9!D |
C:G |
WC [cWW][XIX] |
10.49 |
58.77; 56.79 |
1.98 |
-10.48 |
0.03 |
16.03 |
tRNA |
434D |
7!C:8!D |
C:G |
WC [cWW][XIX] |
10.69 |
55.46; 55.57 |
0.1 |
-3.14 |
0.16 |
6.14 |