Identified Basepairs and Their Conformations and Conformational Parameters
RNA |
PDB |
Position |
bp |
bpC; LG [LW][Sanger] |
dCC |
<X ; <Y |
|<X - <Y| |
Torsion |
Z-Diff |
Buckle |
PDB Id: 435D
BPC Identified: 14
Ambiguities: 0
tRNA |
435D |
1!A:14!B |
U:A |
WC [cWW][XX] |
10.59 |
55.29; 55.62 |
0.33 |
0.09 |
0.08 |
2.01 |
tRNA |
435D |
2!A:13!B |
A:U |
WC [cWW][XX] |
10.47 |
59.35; 55.59 |
3.76 |
-10.2 |
0.27 |
14.17 |
tRNA |
435D |
3!A:12!B |
G:C |
WC [cWW][XIX] |
10.75 |
52.34; 52.72 |
0.38 |
-6.93 |
0.0 |
10.13 |
tRNA |
435D |
4!A:11!B |
C:G |
WC [cWW][XIX] |
10.54 |
58.32; 56.13 |
2.2 |
-12.13 |
0.12 |
16.05 |
tRNA |
435D |
5!A:10!B |
C:G |
WC [cWW][XIX] |
10.61 |
55.96; 53.33 |
2.63 |
-6.38 |
0.07 |
9.73 |
tRNA |
435D |
6!A:9!B |
C:G |
WC [cWW][XIX] |
10.57 |
55.86; 57.24 |
1.39 |
-9.51 |
0.01 |
12.57 |
tRNA |
435D |
7!A:8!B |
C:G |
WC [cWW][XIX] |
10.73 |
53.76; 53.68 |
0.08 |
-3.57 |
0.04 |
8.04 |
tRNA |
435D |
1!C:14!D |
U:A |
WC [cWW][XX] |
10.55 |
55.12; 56.36 |
1.23 |
-2.41 |
0.02 |
4.72 |
tRNA |
435D |
2!C:13!D |
A:U |
WC [cWW][XX] |
10.51 |
54.92; 55.63 |
0.71 |
-8.73 |
0.14 |
14.57 |
tRNA |
435D |
3!C:12!D |
G:C |
WC [cWW][XIX] |
10.54 |
54.17; 56.12 |
1.95 |
-7.59 |
0.06 |
11.57 |
tRNA |
435D |
4!C:11!D |
C:G |
WC [cWW][XIX] |
10.47 |
57.64; 57.48 |
0.16 |
-9.39 |
0.46 |
23.77 |
tRNA |
435D |
5!C:10!D |
C:G |
WC [cWW][XIX] |
10.71 |
54.45; 53.71 |
0.74 |
-8.01 |
0.04 |
11.46 |
tRNA |
435D |
6!C:9!D |
C:G |
WC [cWW][XIX] |
10.7 |
53.4; 51.08 |
2.33 |
-4.67 |
0.13 |
10.16 |
tRNA |
435D |
7!C:8!D |
C:G |
WC [cWW][XIX] |
10.67 |
55.21; 55.4 |
0.19 |
-1.09 |
0.08 |
6.21 |