Identified Basepairs and Their Conformations and Conformational Parameters
| RNA |
PDB |
Position |
bp |
bpC; LG [LW][Sanger] |
dCC |
<X ; <Y |
|<X - <Y| |
Torsion |
Z-Diff |
Buckle |
PDB Id: 439D
BPC Identified: 8
Ambiguities: 0
| dsRNA |
439D |
79!A:97!B |
C:G |
WC [cWW][XIX] |
10.63 |
56.17; 53.94 |
2.23 |
-9.37 |
0.4 |
11.9 |
| dsRNA |
439D |
80!A:96!B |
U:G |
Wb [cWW][XXVIII] |
10.34 |
65.41; 49.42 |
15.99 |
-15.93 |
0.61 |
21.23 |
| dsRNA |
439D |
81!A:95!B |
G:U |
Wb [cWW][XXVIII] |
10.67 |
39.68; 60.25 |
20.57 |
-2.34 |
0.13 |
9.72 |
| dsRNA |
439D |
82!A:94!B |
G:C |
WC [cWW][XIX] |
10.65 |
54.58; 55.24 |
0.66 |
-3.77 |
0.15 |
10.17 |
| dsRNA |
439D |
83!A:93!B |
G:C |
WC [cWW][XIX] |
10.48 |
58.01; 57.08 |
0.93 |
-3.83 |
0.31 |
13.75 |
| dsRNA |
439D |
84!A:92!B |
C:G |
Wb [---][-] |
10.54 |
66.16; 44.88 |
21.29 |
-9.17 |
0.24 |
11.44 |
| dsRNA |
439D |
85!A:91!B |
G:C |
WC [cWW][XIX] |
10.38 |
50.61; 61.35 |
10.74 |
-7.23 |
0.11 |
13.12 |
| dsRNA |
439D |
86!A:90!B |
G:C |
WC [cWW][XIX] |
10.72 |
53.78; 54.68 |
0.9 |
-7.62 |
0.38 |
16.16 |