Identified Basepairs and Their Conformations and Conformational Parameters
| RNA |
PDB |
Position |
bp |
bpC; LG [LW][Sanger] |
dCC |
<X ; <Y |
|<X - <Y| |
Torsion |
Z-Diff |
Buckle |
PDB Id: 466D
BPC Identified: 14
Ambiguities: 0
| tRNA |
466D |
1!A:14!B |
U:A |
WC [cWW][XX] |
10.57 |
56.08; 55.81 |
0.27 |
-4.05 |
0.18 |
8.47 |
| tRNA |
466D |
2!A:13!B |
A:U |
WC [cWW][XX] |
10.19 |
60.68; 59.25 |
1.43 |
-12.15 |
0.03 |
16.13 |
| tRNA |
466D |
3!A:12!B |
G:C |
WC [cWW][XIX] |
10.68 |
52.55; 53.36 |
0.81 |
-6.06 |
0.07 |
9.56 |
| tRNA |
466D |
4!A:11!B |
C:G |
WC [cWW][XIX] |
10.64 |
59.35; 52.36 |
6.99 |
-4.78 |
0.04 |
8.79 |
| tRNA |
466D |
5!A:10!B |
U:G |
Wb [cWW][XXVIII] |
10.63 |
66.87; 39.97 |
26.9 |
-7.51 |
0.49 |
11.0 |
| tRNA |
466D |
6!A:9!B |
C:G |
WC [cWW][XIX] |
10.67 |
54.22; 54.41 |
0.19 |
-5.06 |
0.09 |
6.98 |
| tRNA |
466D |
7!A:8!B |
C:G |
WC [cWW][XIX] |
10.7 |
56.94; 53.69 |
3.25 |
0.38 |
0.16 |
4.19 |
| tRNA |
466D |
1!C:14!D |
U:A |
WC [cWW][XX] |
10.76 |
53.96; 52.08 |
1.87 |
-2.75 |
0.06 |
5.03 |
| tRNA |
466D |
2!C:13!D |
A:U |
WC [cWW][XX] |
10.49 |
56.29; 58.55 |
2.26 |
-5.55 |
0.04 |
9.62 |
| tRNA |
466D |
3!C:12!D |
G:C |
WC [cWW][XIX] |
10.56 |
58.93; 59.18 |
0.25 |
-10.8 |
0.02 |
15.46 |
| tRNA |
466D |
4!C:11!D |
C:G |
WC [cWW][XIX] |
10.7 |
55.49; 52.62 |
2.87 |
-5.99 |
0.12 |
9.2 |
| tRNA |
466D |
5!C:10!D |
U:G |
Wb [cWW][XXVIII] |
10.41 |
63.46; 48.25 |
15.21 |
-5.95 |
0.32 |
19.32 |
| tRNA |
466D |
6!C:9!D |
C:G |
WC [cWW][XIX] |
10.59 |
58.89; 54.47 |
4.42 |
-12.37 |
0.13 |
16.56 |
| tRNA |
466D |
7!C:8!D |
C:G |
WC [cWW][XIX] |
10.79 |
55.57; 51.49 |
4.08 |
-6.22 |
0.1 |
9.51 |