Identified Basepairs and Their Conformations and Conformational Parameters
| RNA |
PDB |
Position |
bp |
bpC; LG [LW][Sanger] |
dCC |
<X ; <Y |
|<X - <Y| |
Torsion |
Z-Diff |
Buckle |
PDB Id: 468D
BPC Identified: 12
Ambiguities: 0
| dsRNA |
468D |
1!A:24!B |
C:G |
WC [cWW][XIX] |
10.55 |
55.96; 55.65 |
0.3 |
-10.19 |
0.09 |
13.94 |
| dsRNA |
468D |
2!A:23!B |
G:C |
WC [cWW][XIX] |
10.4 |
53.86; 57.14 |
3.28 |
-11.4 |
0.08 |
15.61 |
| dsRNA |
468D |
3!A:22!B |
C:G |
WC [cWW][XIX] |
10.69 |
58.63; 55.39 |
3.25 |
-2.09 |
0.52 |
9.44 |
| dsRNA |
468D |
4!A:21!B |
G:C |
WC [cWW][XIX] |
10.56 |
58.28; 56.73 |
1.55 |
-4.83 |
0.46 |
19.47 |
| dsRNA |
468D |
5!A:20!B |
A:U |
WC [cWW][XX] |
10.46 |
55.23; 55.75 |
0.51 |
-1.76 |
0.83 |
14.71 |
| dsRNA |
468D |
6!A:19!B |
A:U |
WC [cWW][XX] |
10.5 |
58.6; 53.91 |
4.7 |
-3.05 |
0.65 |
10.23 |
| dsRNA |
468D |
7!A:18!B |
U:A |
WC [cWW][XX] |
10.23 |
57.28; 59.13 |
1.86 |
-8.32 |
0.37 |
14.21 |
| dsRNA |
468D |
8!A:17!B |
U:A |
WC [cWW][XX] |
10.61 |
54.32; 56.27 |
1.95 |
-6.57 |
0.28 |
12.55 |
| dsRNA |
468D |
9!A:16!B |
C:G |
WC [cWW][XIX] |
10.51 |
56.71; 56.63 |
0.08 |
-7.78 |
0.67 |
12.45 |
| dsRNA |
468D |
10!A:15!B |
G:C |
WC [cWW][XIX] |
10.54 |
55.73; 54.79 |
0.94 |
-10.54 |
0.69 |
15.65 |
| dsRNA |
468D |
11!A:14!B |
C:G |
WC [cWW][XIX] |
10.54 |
57.44; 54.22 |
3.22 |
-10.62 |
0.1 |
15.07 |
| dsRNA |
468D |
12!A:13!B |
G:C |
WC [cWW][XIX] |
10.54 |
54.52; 56.68 |
2.16 |
-14.36 |
0.1 |
19.96 |