Identified Basepairs and Their Conformations and Conformational Parameters
| RNA |
PDB |
Position |
bp |
bpC; LG [LW][Sanger] |
dCC |
<X ; <Y |
|<X - <Y| |
Torsion |
Z-Diff |
Buckle |
PDB Id: 470D
BPC Identified: 12
Ambiguities: 0
| dsRNA |
470D |
1!A:24!B |
C:G |
WC [cWW][XIX] |
10.66 |
54.51; 54.67 |
0.16 |
-7.85 |
0.23 |
12.35 |
| dsRNA |
470D |
2!A:23!B |
G:C |
WC [cWW][XIX] |
10.45 |
54.16; 56.78 |
2.62 |
-12.51 |
0.04 |
15.09 |
| dsRNA |
470D |
3!A:22!B |
C:G |
WC [cWW][XIX] |
10.65 |
58.51; 55.58 |
2.92 |
-8.05 |
0.02 |
16.46 |
| dsRNA |
470D |
4!A:21!B |
G:C |
WC [cWW][XIX] |
10.41 |
54.79; 62.03 |
7.23 |
-0.68 |
0.67 |
15.53 |
| dsRNA |
470D |
5!A:20!B |
A:U |
WC [cWW][XX] |
10.43 |
56.69; 58.76 |
2.07 |
2.47 |
0.1 |
9.5 |
| dsRNA |
470D |
6!A:19!B |
A:U |
WC [cWW][XX] |
10.62 |
56.62; 55.77 |
0.85 |
-5.54 |
1.25 |
7.61 |
| dsRNA |
470D |
7!A:18!B |
U:A |
WC [cWW][XX] |
10.35 |
57.69; 60.16 |
2.46 |
-2.95 |
0.09 |
8.6 |
| dsRNA |
470D |
8!A:17!B |
U:A |
WC [cWW][XX] |
10.48 |
55.12; 55.63 |
0.51 |
-4.94 |
0.2 |
13.45 |
| dsRNA |
470D |
9!A:16!B |
C:G |
WC [cWW][XIX] |
10.53 |
56.6; 56.89 |
0.29 |
-6.0 |
0.62 |
11.62 |
| dsRNA |
470D |
10!A:15!B |
G:C |
WC [cWW][XIX] |
10.67 |
53.32; 55.77 |
2.45 |
-9.63 |
0.52 |
12.43 |
| dsRNA |
470D |
11!A:14!B |
C:G |
WC [cWW][XIX] |
10.38 |
61.15; 53.63 |
7.52 |
-9.86 |
0.43 |
12.42 |
| dsRNA |
470D |
12!A:13!B |
G:C |
WC [cWW][XIX] |
10.58 |
57.29; 54.24 |
3.05 |
-11.5 |
0.08 |
12.78 |