Identified Basepairs and Their Conformations and Conformational Parameters
| RNA |
PDB |
Position |
bp |
bpC; LG [LW][Sanger] |
dCC |
<X ; <Y |
|<X - <Y| |
Torsion |
Z-Diff |
Buckle |
PDB Id: 471D
BPC Identified: 12
Ambiguities: 0
| dsRNA |
471D |
1!A:24!B |
C:G |
WC [cWW][XIX] |
10.62 |
52.89; 55.25 |
2.36 |
-11.35 |
0.05 |
12.07 |
| dsRNA |
471D |
2!A:23!B |
G:C |
WC [cWW][XIX] |
10.59 |
55.81; 55.47 |
0.34 |
-14.66 |
0.08 |
16.36 |
| dsRNA |
471D |
3!A:22!B |
C:G |
WC [cWW][XIX] |
10.39 |
58.63; 56.83 |
1.8 |
0.08 |
0.28 |
6.52 |
| dsRNA |
471D |
4!A:21!B |
G:C |
WC [cWW][XIX] |
10.45 |
57.06; 56.34 |
0.72 |
-0.25 |
0.29 |
7.37 |
| dsRNA |
471D |
5!A:20!B |
A:U |
WC [cWW][XX] |
10.22 |
57.66; 58.99 |
1.33 |
0.09 |
0.15 |
3.44 |
| dsRNA |
471D |
6!A:19!B |
A:U |
WC [cWW][XX] |
10.42 |
57.3; 57.78 |
0.48 |
-0.66 |
0.71 |
8.74 |
| dsRNA |
471D |
7!A:18!B |
U:A |
WC [cWW][XX] |
10.01 |
58.49; 59.88 |
1.38 |
-7.1 |
0.35 |
10.32 |
| dsRNA |
471D |
8!A:17!B |
U:A |
WC [cWW][XX] |
10.52 |
57.15; 57.58 |
0.42 |
-0.15 |
0.29 |
8.43 |
| dsRNA |
471D |
9!A:16!B |
C:G |
WC [cWW][XIX] |
10.43 |
58.23; 57.35 |
0.88 |
-5.18 |
0.55 |
11.19 |
| dsRNA |
471D |
10!A:15!B |
G:C |
WC [cWW][XIX] |
10.57 |
55.4; 54.87 |
0.53 |
-4.69 |
0.19 |
14.79 |
| dsRNA |
471D |
11!A:14!B |
C:G |
WC [cWW][XIX] |
10.52 |
55.77; 55.81 |
0.03 |
-8.29 |
0.29 |
13.87 |
| dsRNA |
471D |
12!A:13!B |
G:C |
WC [cWW][XIX] |
10.64 |
53.69; 54.2 |
0.52 |
-15.03 |
0.16 |
12.79 |