Identified Basepairs and Their Conformations and Conformational Parameters
| RNA |
PDB |
Position |
bp |
bpC; LG [LW][Sanger] |
dCC |
<X ; <Y |
|<X - <Y| |
Torsion |
Z-Diff |
Buckle |
PDB Id: 485D
BPC Identified: 8
Ambiguities: 0
| dsRNA |
485D |
2!A:18!B |
G:C |
WC [cWW][XIX] |
10.79 |
53.92; 52.93 |
0.99 |
-7.6 |
0.02 |
10.41 |
| dsRNA |
485D |
3!A:17!B |
U:G |
Wb [cWW][XXVIII] |
10.35 |
70.39; 44.1 |
26.29 |
-9.03 |
0.33 |
12.25 |
| dsRNA |
485D |
4!A:16!B |
G:C |
WC [cWW][XIX] |
10.52 |
58.84; 59.93 |
1.08 |
-7.4 |
0.13 |
13.28 |
| dsRNA |
485D |
5!A:15!B |
A:U |
WC [cWW][XX] |
10.73 |
54.75; 55.95 |
1.2 |
-4.7 |
0.03 |
6.39 |
| dsRNA |
485D |
6!A:14!B |
U:A |
WC [cWW][XX] |
10.54 |
55.55; 58.95 |
3.4 |
-10.57 |
0.03 |
14.78 |
| dsRNA |
485D |
7!A:13!B |
C:G |
WC [cWW][XIX] |
10.75 |
53.65; 51.92 |
1.73 |
-2.46 |
0.16 |
6.75 |
| dsRNA |
485D |
8!A:12!B |
G:U |
Wb [cWW][XXVIII] |
10.3 |
48.87; 72.82 |
23.95 |
-6.85 |
0.16 |
10.51 |
| dsRNA |
485D |
9!A:11!B |
C:G |
WC [cWW][XIX] |
10.63 |
56.14; 55.59 |
0.55 |
-2.88 |
0.12 |
6.9 |