Identified Basepairs and Their Conformations and Conformational Parameters

PDB Id: 4TRA BPC Identified: 32 Ambiguities: 0
RNA PDB Position bp bpC; LG [LW][Sanger] dCC <X ; <Y |<X - <Y| Torsion Z-Diff Buckle
tRNA 4TRA 1!A:72!A G:C WC [cWW][XIX] 10.17 46.61; 59.1 12.49 -8.0 0.47 19.74
tRNA 4TRA 2!A:71!A C:G WC [cWW][XIX] 11.15 40.37; 56.45 16.09 1.24 0.03 3.27
tRNA 4TRA 3!A:70!A G:C WC [cWW][XIX] 10.41 47.33; 56.07 8.75 -18.9 0.31 24.65
tRNA 4TRA 4!A:69!A G:U Wb [cWW][XXVIII] 10.41 35.45; 69.3 33.85 -13.8 0.43 17.93
tRNA 4TRA 5!A:68!A A:U WC [cWW][XX] 10.75 48.76; 55.0 6.24 -21.3 0.18 27.21
tRNA 4TRA 6!A:67!A U:A WC [cWW][XX] 10.09 60.39; 55.98 4.4 -15.74 0.07 21.35
tRNA 4TRA 7!A:66!A U:A WC [cWW][XX] 10.68 54.74; 52.56 2.19 -3.44 0.2 5.78
tRNA 4TRA 8!A:14!A U:A rH_1 [tWH][XXIV] 9.65 29.65; 21.78 7.87 -178.18 0.04 19.35
tRNA 4TRA 9!A:23!A A:A rS* [tHH][-] 10.93 12.73; 12.02 0.7 133.34 0.2 18.31
tRNA 4TRA 10!A:45!A G:G pS_1 [cSH][-] 8.56 40.8; 122.64 81.83 -12.42 0.15 23.12
tRNA 4TRA 10!A:25!A G:C WC [cWW][XIX] 10.92 47.3; 48.38 1.08 3.39 0.01 4.22
tRNA 4TRA 11!A:24!A C:G WC [cWW][XIX] 10.81 50.57; 54.1 3.53 -3.01 0.04 2.9
tRNA 4TRA 12!A:23!A U:A WC [cWW][XX] 10.76 55.44; 51.07 4.36 -6.49 0.02 9.24
tRNA 4TRA 13!A:22!A C:G WC [cWW][XIX] 10.87 57.15; 49.92 7.24 -2.76 0.31 10.45
tRNA 4TRA 15!A:48!A G:C rWb [tWW][XXII] 10.52 34.66; 58.62 23.96 172.59 0.12 7.51
tRNA 4TRA 18!A:55!A G:U fS_PSU [---][-] 8.83 27.2; 129.97 102.78 -120.62 0.43 20.87
tRNA 4TRA 19!A:56!A G:C WC [cWW][XIX] 10.37 54.42; 51.81 2.61 -19.08 0.9 33.61
tRNA 4TRA 22!A:46!A G:G rH_1 [tWH][VII] 10.9 36.24; 27.04 9.2 -174.95 0.18 8.85
tRNA 4TRA 26!A:44!A G:A WC [cWW][VIII] 12.74 46.15; 43.99 2.16 -17.54 0.28 37.45
tRNA 4TRA 27!A:43!A C:G WC [cWW][XIX] 10.73 50.37; 52.49 2.12 -10.4 0.15 14.84
tRNA 4TRA 28!A:42!A C:G WC [cWW][XIX] 10.86 51.0; 53.24 2.23 -6.43 0.01 8.25
tRNA 4TRA 29!A:41!A A:U WC [cWW][XX] 11.27 47.43; 49.78 2.36 2.24 0.69 8.16
tRNA 4TRA 30!A:40!A G:C WC [cWW][XIX] 10.4 52.83; 55.43 2.61 -14.06 0.3 18.28
tRNA 4TRA 31!A:39!A A:U Wb*_PSU [---][-] 10.77 60.5; 66.31 5.81 -10.98 0.53 11.47
tRNA 4TRA 47!A:50!A U:U rpS(ps:O1P-O2*) [---][-] 9.28 64.06; 111.27 47.21 143.27 0.36 64.55
tRNA 4TRA 49!A:65!A C:G WC [cWW][XIX] 10.91 48.51; 52.67 4.15 -12.22 0.01 16.47
tRNA 4TRA 50!A:64!A U:A WC [cWW][XX] 10.28 57.26; 54.8 2.46 -2.4 0.34 8.22
tRNA 4TRA 51!A:63!A G:C WC [cWW][XIX] 10.36 56.25; 58.14 1.89 -7.81 0.66 17.5
tRNA 4TRA 52!A:62!A U:A WC [cWW][XX] 10.43 56.23; 56.17 0.06 -8.56 0.23 8.76
tRNA 4TRA 53!A:61!A G:C WC [cWW][XIX] 10.72 52.87; 58.6 5.73 -0.9 0.19 9.32
tRNA 4TRA 54!A:58!A U:A rH_1 [tWH][XXIV] 9.85 30.85; 25.44 5.4 174.62 0.1 10.98
tRNA 4TRA 55!A:57!A U:G S_PSU(sb:O2*-N7) [---][-] 6.69 99.8; 41.25 58.55 -177.78 0.85 31.67