Identified Basepairs and Their Conformations and Conformational Parameters
| RNA |
PDB |
Position |
bp |
bpC; LG [LW][Sanger] |
dCC |
<X ; <Y |
|<X - <Y| |
Torsion |
Z-Diff |
Buckle |
PDB Id: 6MSF
BPC Identified: 8
Ambiguities: 0
| RNA_aptamer |
6MSF |
1!R:14!R |
C:G |
WC [cWW][XIX] |
10.74 |
52.82; 52.7 |
0.12 |
-15.28 |
0.09 |
21.72 |
| RNA_aptamer |
6MSF |
2!R:13!R |
C:G |
WC [cWW][XIX] |
10.64 |
55.84; 56.01 |
0.17 |
-4.29 |
0.06 |
9.26 |
| RNA_aptamer |
6MSF |
4!R:12!R |
C:G |
WC [cWW][XIX] |
10.59 |
56.52; 57.18 |
0.66 |
-2.52 |
0.01 |
5.19 |
| RNA_aptamer |
6MSF |
5!R:11!R |
A:U |
WC [cWW][XX] |
10.15 |
60.57; 59.76 |
0.81 |
6.72 |
0.29 |
13.54 |
| RNA_aptamer |
6MSF |
6!R:10!R |
G:C |
WC [cWW][XIX] |
10.38 |
57.95; 59.1 |
1.15 |
-1.42 |
0.35 |
0.69 |
| RNA_aptamer |
6MSF |
4!S:12!S |
C:G |
WC [cWW][XIX] |
10.41 |
56.9; 57.56 |
0.66 |
-0.11 |
0.13 |
12.16 |
| RNA_aptamer |
6MSF |
5!S:11!S |
A:U |
WC [cWW][XX] |
10.12 |
59.81; 59.75 |
0.06 |
5.27 |
0.09 |
10.49 |
| RNA_aptamer |
6MSF |
6!S:10!S |
G:C |
WC [cWW][XIX] |
10.48 |
56.98; 57.48 |
0.5 |
0.46 |
0.19 |
12.5 |