#- #- editor #- Fri May 11 15:52:33 2001 #- #- #- Reference sequence: E.coli #- Attributes: #= E.coli nobase -in -out vis prt rna lin 5>3 func ref #= 2.11.2-CHL nobase -in out vis bold rna lin 5>3 func #= 2.11.2.1 nobase -in out vis bold rna lin 5>3 func #= (1)-Eukary nobase -in out vis bold rna lin 5>3 func #= (2)-Euglen nobase -in out vis bold rna lin 5>3 func #= chl.A.long nobase in out vis prt rna lin 5>3 func #= chl.E.grac nobase in out vis prt rna lin 5>3 func #= (2)-Eukary nobase -in out vis bold rna lin 5>3 func #= (3)-Alveol nobase -in out vis bold rna lin 5>3 func #= pl.E.max.1 nobase in out vis prt rna lin 5>3 func #= pl.E.max.2 nobase in out vis prt rna lin 5>3 func #= pl.E.melea nobase in out vis prt rna lin 5>3 func #= pl.E.tenel nobase in out vis prt rna lin 5>3 func #= pl.N.canin nobase in out vis prt rna lin 5>3 func #= pl.T.gon.1 nobase in out vis prt rna lin 5>3 func #= pl.T.gon.2 nobase in out vis prt rna lin 5>3 func #= pl.H.cates nobase in out vis prt rna lin 5>3 func #= pl.P.falci nobase in out vis prt rna lin 5>3 func #= pl.P.vivax nobase in out vis prt rna lin 5>3 func #= pl.Bab.big nobase in out vis prt rna lin 5>3 func #= pl.B.bov.1 nobase in out vis prt rna lin 5>3 func #= pl.B.bov.2 nobase in out vis prt rna lin 5>3 func #= (3)-Chlora nobase -in out vis bold rna lin 5>3 func #= chl.Chl.re nobase in out vis prt rna lin 5>3 func #= chl.Ch.240 nobase in out vis prt rna lin 5>3 func #= chl.Ch.242 nobase in out vis prt rna lin 5>3 func #= (3)-Crypto nobase -in out vis bold rna lin 5>3 func #= chl.Cry.sp nobase in out vis prt rna lin 5>3 func #= chl.G.th.1 nobase in out vis prt rna lin 5>3 func #= chl.G.th.2 nobase in out vis prt rna lin 5>3 func #= chl.P.sali nobase in out vis prt rna lin 5>3 func #= (3)-Glauco nobase -in out vis bold rna lin 5>3 func #= Cya.par.cy nobase in out vis prt rna lin 5>3 func #= chl.C.para nobase in out vis prt rna lin 5>3 func #= chl.G.nost nobase in out vis prt rna lin 5>3 func #= chl.G.vacu nobase in out vis prt rna lin 5>3 func #= chl.G.witt nobase in out vis prt rna lin 5>3 func #= (3)-Haptop nobase -in out vis bold rna lin 5>3 func #= chl.E.huxl nobase in out vis prt rna lin 5>3 func #= chl.Iso.sp nobase in out vis prt rna lin 5>3 func #= pl.O.neapo nobase in out vis prt rna lin 5>3 func #= chl.Ochros nobase in out vis prt rna lin 5>3 func #= (3)-Rhodop nobase -in out vis bold rna lin 5>3 func #= chl.P.pu.1 nobase in out vis prt rna lin 5>3 func #= chl.P.pu.A nobase in out vis prt rna lin 5>3 func #= chl.P.pu.B nobase in out vis prt rna lin 5>3 func #= chl.C.cald nobase in out vis prt rna lin 5>3 func #= Chl.Cya.ca nobase in out vis prt rna lin 5>3 func #= chl.Ant.sp nobase in out vis prt rna lin 5>3 func #= chl.C.cris nobase in out vis prt rna lin 5>3 func #= chl.P.palm nobase in out vis prt rna lin 5>3 func #= (3)-Viridi nobase -in out vis bold rna lin 5>3 func #= (4)-Chloro nobase -in out vis bold rna lin 5>3 func #= chl.C.elli nobase in out vis prt rna lin 5>3 func #= chl.C.mira nobase in out vis prt rna lin 5>3 func #= chl.C.prot nobase in out vis prt rna lin 5>3 func #= chl.C.sa.1 nobase in out vis prt rna lin 5>3 func #= chl.C.sa.2 nobase in out vis prt rna lin 5>3 func #= chl.C.soro nobase in out vis prt rna lin 5>3 func #= chl.C.vu.1 nobase in out vis prt rna lin 5>3 func #= chl.C.vu.2 nobase in out vis prt rna lin 5>3 func #= chl.C.vu.3 nobase in out vis prt rna lin 5>3 func #= chl.N.euca nobase in out vis prt rna lin 5>3 func #= A.nidulans nobase in out vis prt rna lin 5>3 func #= Synech.sp. nobase in out vis prt rna lin 5>3 func #= M.aeru.PCC nobase in out vis prt rna lin 5>3 func #= chl.P.wick nobase in out vis prt rna lin 5>3 func #= chl.P.zopf nobase in out vis prt rna lin 5>3 func #= chl.C.euga nobase in out vis prt rna lin 5>3 func #= chl.C.moew nobase in out vis prt rna lin 5>3 func #= chl.C.pall nobase in out vis prt rna lin 5>3 func #= chl.C.rein nobase in out vis prt rna lin 5>3 func #= chl.M.squa nobase in out vis prt rna lin 5>3 func #= chl.C.ke.1 nobase in out vis prt rna lin 5>3 func #= chl.C.ke.2 nobase in out vis prt rna lin 5>3 func #= chl.C.frag nobase in out vis prt rna lin 5>3 func #= (4)-Strept nobase -in out vis bold rna lin 5>3 func #= chl.Cha.sp nobase in out vis prt rna lin 5>3 func #= chl.C.orbi nobase in out vis prt rna lin 5>3 func #= chl.K.flac nobase in out vis prt rna lin 5>3 func #= chl.S.maxi nobase in out vis prt rna lin 5>3 func #= chl.S.palu nobase in out vis prt rna lin 5>3 func #= chl.M.poly nobase in out vis prt rna lin 5>3 func #= chl.I.mela nobase in out vis prt rna lin 5>3 func #= chl.S.apod nobase in out vis prt rna lin 5>3 func #= chl.L.digi nobase in out vis prt rna lin 5>3 func #= chl.E.arve nobase in out vis prt rna lin 5>3 func #= chl.D.maxi nobase in out vis prt rna lin 5>3 func #= chl.P.aqui nobase in out vis prt rna lin 5>3 func #= chl.C.glau nobase in out vis prt rna lin 5>3 func #= chl.O.cinn nobase in out vis prt rna lin 5>3 func #= chl.L.japo nobase in out vis prt rna lin 5>3 func #= chl.A.evec nobase in out vis prt rna lin 5>3 func #= chl.B.bite nobase in out vis prt rna lin 5>3 func #= chl.O.enge nobase in out vis prt rna lin 5>3 func #= chl.P.nudu nobase in out vis prt rna lin 5>3 func #= chl.T.obla nobase in out vis prt rna lin 5>3 func #= chl.J.virg nobase in out vis prt rna lin 5>3 func #= chl.P.thun nobase in out vis prt rna lin 5>3 func #= chl.E.trif nobase in out vis prt rna lin 5>3 func #= chl.O.sati nobase in out vis prt rna lin 5>3 func #= chl.Z.ma.1 nobase in out vis prt rna lin 5>3 func #= chl.Z.ma.2 nobase in out vis prt rna lin 5>3 func #= chl.D.caro nobase in out vis prt rna lin 5>3 func #= chl.C.amer nobase in out vis prt rna lin 5>3 func #= chl.E.virg nobase in out vis prt rna lin 5>3 func #= chl.O.mino nobase in out vis prt rna lin 5>3 func #= chl.C.refl nobase in out vis prt rna lin 5>3 func #= chl.N.pl.1 nobase in out vis prt rna lin 5>3 func #= chl.N.pl.2 nobase in out vis prt rna lin 5>3 func #= chl.N.ta.1 nobase in out vis prt rna lin 5>3 func #= chl.N.ta.2 nobase in out vis prt rna lin 5>3 func #= chl.G.max nobase in out vis prt rna lin 5>3 func #= chl.P.sa.1 nobase in out vis prt rna lin 5>3 func #= chl.P.sa.2 nobase in out vis prt rna lin 5>3 func #= chl.P.sa.3 nobase in out vis prt rna lin 5>3 func #= chl.A.glut nobase in out vis prt rna lin 5>3 func #= chl.A.inca nobase in out vis prt rna lin 5>3 func #= chl.C.papa nobase in out vis prt rna lin 5>3 func #= chl.Cor.cr nobase in out vis prt rna lin 5>3 func #= chl.C.cocc nobase in out vis prt rna lin 5>3 func #= chl.C.rube nobase in out vis prt rna lin 5>3 func #= chl.H.afri nobase in out vis prt rna lin 5>3 func #= chl.M.yama nobase in out vis prt rna lin 5>3 func #= chl.Bda.am nobase in out vis prt rna lin 5>3 func #= chl.Pil.th nobase in out vis prt rna lin 5>3 func #= (3)-strame nobase -in out vis bold rna lin 5>3 func #= chl.O.si.1 nobase in out vis prt rna lin 5>3 func #= chl.O.si.2 nobase in out vis prt rna lin 5>3 func #= chl.S.pseu nobase in out vis prt rna lin 5>3 func #= chl.O.dani nobase in out vis prt rna lin 5>3 func #= chl.P.litt nobase in out vis prt rna lin 5>3 func #= chl.H.akas nobase in out vis prt rna lin 5>3 func #= (2)-Unclas nobase -in out vis bold rna lin 5>3 func #= chl.OM283 nobase in out vis prt rna lin 5>3 func #= chl.OM270 nobase in out vis prt rna lin 5>3 func #= chl.OM164 nobase in out vis prt rna lin 5>3 func #= chl.OM153 nobase in out vis prt rna lin 5>3 func #= chl.OM125 nobase in out vis prt rna lin 5>3 func #= chl.OM081 nobase in out vis prt rna lin 5>3 func #= chl.OM039 nobase in out vis prt rna lin 5>3 func #= chl.OM005 nobase in out vis prt rna lin 5>3 func #= chl.OM111 nobase in out vis prt rna lin 5>3 func #= chl.OM255 nobase in out vis prt rna lin 5>3 func #= chl.OM020 nobase in out vis prt rna lin 5>3 func #= chl.OM021 nobase in out vis prt rna lin 5>3 func #= chl.OM134 nobase in out vis prt rna lin 5>3 func #= chl.OCS020 nobase in out vis prt rna lin 5>3 func #= chl.OCS031 nobase in out vis prt rna lin 5>3 func #= chl.OCS050 nobase in out vis prt rna lin 5>3 func #= chl.OCS054 nobase in out vis prt rna lin 5>3 func #= chl.OCS056 nobase in out vis prt rna lin 5>3 func #= chl.OCS162 nobase in out vis prt rna lin 5>3 func #= chl.OCS182 nobase in out vis prt rna lin 5>3 func #= 2.11.2.1.1 nobase -in out vis bold rna lin 5>3 func #= env.OM19 nobase in out vis prt dna lin 5>3 func #= env.OM22 nobase in out vis prt dna lin 5>3 func #= env.PAD32 nobase in out vis prt dna lin 5>3 func #= env.PAD22 nobase in out vis prt dna lin 5>3 func #= env.agg462 nobase in out vis prt dna lin 5>3 func #= env.agg56 nobase in out vis prt dna lin 5>3 func #= Sklt.cos_C nobase in out vis prt dna lin 5>3 func #= 2.11.2.1.2 nobase -in out vis bold rna lin 5>3 func #= Eugl.gr4_C nobase in out vis prt dna lin 5>3 func #= Eugl.gr1_C nobase in out vis prt dna lin 5>3 func #= Eugl.gr2_C nobase in out vis prt dna lin 5>3 func #= Eugl.gr3_C nobase in out vis prt dna lin 5>3 func #= 2.11.2.1.3 nobase -in out vis bold rna lin 5>3 func #= Ochs.nea_C nobase in out vis prt dna lin 5>3 func #= 2.11.2.1.4 nobase -in out vis bold rna lin 5>3 func #= Crpm.phi_C nobase in out vis prt dna lin 5>3 func #= 2.11.2.2 nobase -in out vis bold rna lin 5>3 func #= 2.11.2.2.1 nobase -in out vis bold rna lin 5>3 func #= Pyrm.par_C nobase in out vis prt dna lin 5>3 func #= Clmy.par_C nobase in out vis prt dna lin 5>3 func #= Yamg.uni_C nobase in out vis prt dna lin 5>3 func #= Gonm.pec_C nobase in out vis prt dna lin 5>3 func #= 2.11.2.2.2 nobase -in out vis bold rna lin 5>3 func #= Clst.ehr_C nobase in out vis prt dna lin 5>3 func #= Spgn.com_C nobase in out vis prt dna lin 5>3 func #= Polt.com_C nobase in out vis prt dna lin 5>3 func #= Thdm.del_C nobase in out vis prt dna lin 5>3 func #= Pisu.sat_C nobase in out vis prt dna lin 5>3 func #= Epif.vir_C nobase in out vis prt dna lin 5>3 func #= Nico.ta2_C nobase in out vis prt dna lin 5>3 func #= Nico.ta3_C nobase in out vis prt dna lin 5>3 func #= Nico.ta4_C nobase in out vis prt dna lin 5>3 func #= Nico.ta5_C nobase in out vis prt dna lin 5>3 func #= Nico.ta6_C nobase in out vis prt dna lin 5>3 func #= Nico.ta7_C nobase in out vis prt dna lin 5>3 func #= Nico.ta8_C nobase in out vis prt dna lin 5>3 func #= Bras.nap_C nobase in out vis prt dna lin 5>3 func #= Adri.gla_C nobase in out vis prt dna lin 5>3 func #= Ephr.pul_C nobase in out vis prt dna lin 5>3 func #= Rici.com_C nobase in out vis prt dna lin 5>3 func #= 2.11.2.3 nobase -in out vis bold rna lin 5>3 func #= Cynp.par_C nobase in out vis prt dna lin 5>3 func #= 2.11.2.4 nobase -in out vis bold rna lin 5>3 func #= Psan.galea nobase in out vis prt dna lin 5>3 func #= Psan.6903 nobase in out vis prt dna lin 5>3 func #- #:E.coli:name:Escherichia coli #:E.coli:subsp: #:E.coli:strain: #:E.coli:atcc:? #:E.coli:acs:J01695 #:E.coli:auth: #:E.coli:title: #:E.coli:jour: #:E.coli:who:Noller-Published #:E.coli:date:1978 #:E.coli:rem:Phylo:Eubacteria,Purple,gamma,3 #:2.11.2-CHL:name:2.11.2 CHLOROPLASTS_AND_CYANELLES #:2.11.2-CHL:subsp: #:2.11.2-CHL:strain: #:2.11.2-CHL:atcc: #:2.11.2-CHL:acs:DIVIDER #:2.11.2-CHL:auth: #:2.11.2-CHL:title: #:2.11.2-CHL:jour: #:2.11.2-CHL:who:Brian Dean #:2.11.2-CHL:date:Sat Jan 9 11:46:11 1999 #:2.11.2.1:name:2.11.2.1 OTHER_CHLOROPLASTS #:2.11.2.1:subsp: #:2.11.2.1:strain: #:2.11.2.1:atcc: #:2.11.2.1:acs:DIVIDER #:2.11.2.1:auth: #:2.11.2.1:title: #:2.11.2.1:jour: #:2.11.2.1:who:Brian Dean #:2.11.2.1:date:Sat Jan 9 11:46:11 1999 #:(1)-Eukary:name: #:(1)-Eukary:subsp: #:(1)-Eukary:strain: #:(1)-Eukary:atcc: #:(1)-Eukary:acs:DIVIDER #:(1)-Eukary:auth: #:(1)-Eukary:title: #:(1)-Eukary:jour: #:(1)-Eukary:who:DAMBERGER, SIMON HEL,Porter B256,, #:(1)-Eukary:date:Thu Nov 17 08:53:47 1994 #:(2)-Euglen:name: #:(2)-Euglen:subsp: #:(2)-Euglen:strain: #:(2)-Euglen:atcc: #:(2)-Euglen:acs:DIVIDER #:(2)-Euglen:auth: #:(2)-Euglen:title: #:(2)-Euglen:jour: #:(2)-Euglen:who:DAMBERGER, SIMON HEL,Porter B256,, #:(2)-Euglen:date:Thu Nov 17 08:53:47 1994 #:chl.A.long:name:Astasia longa chloroplast #:chl.A.long:subsp: #:chl.A.long:strain: #:chl.A.long:atcc: #:chl.A.long:acs:X14386 #:chl.A.long:auth: #:chl.A.long:title: #:chl.A.long:jour:EMBL ALCRDNA X14386 #:chl.A.long:who:Siemeister G., Hachtel W.;Unpublished #:chl.A.long:date: #:chl.E.grac:name:chloroplast,Euglena gracilis #:chl.E.grac:subsp: #:chl.E.grac:strain: #:chl.E.grac:atcc:???? #:chl.E.grac:acs:X12890 V00159 #:chl.E.grac:auth: #:chl.E.grac:title: #:chl.E.grac:jour:Graf,,,Kossel NAR 10:6369(1982) FINISH************** #:chl.E.grac:who:published #:chl.E.grac:date:Nov 19 1982 #:chl.E.grac:rem:Phylo:Eubacteria,Cyanobacteria,chloroplast #:(2)-Eukary:name:Eukaryote Crown Group #:(2)-Eukary:subsp: #:(2)-Eukary:strain: #:(2)-Eukary:atcc: #:(2)-Eukary:acs:DIVIDER #:(2)-Eukary:auth: #:(2)-Eukary:title: #:(2)-Eukary:jour: #:(2)-Eukary:who:DAMBERGER, SIMON HEL,Porter B256,, #:(2)-Eukary:date:Thu Nov 17 08:53:47 1994 #:(3)-Alveol:name: #:(3)-Alveol:subsp: #:(3)-Alveol:strain: #:(3)-Alveol:atcc: #:(3)-Alveol:acs:DIVIDER #:(3)-Alveol:auth: #:(3)-Alveol:title: #:(3)-Alveol:jour: #:(3)-Alveol:who:DAMBERGER, SIMON HEL,Porter B256,, #:(3)-Alveol:date:Thu Nov 17 08:53:47 1994 #:pl.E.max.1:name:Chloroplast Eimeria maxima. #:pl.E.max.1:subsp: #:pl.E.max.1:strain:RNA, partial sequence #:pl.E.max.1:atcc: #:pl.E.max.1:acs:AF040975 #:pl.E.max.1:auth:Lang-Unnasch,N., Reith,M.E., Munholland,J. and Barta,J.R. #:pl.E.max.1:title:phylum Apicomplexa #:pl.E.max.1:jour:Int. J. Parasitol. 28 (11), 1743-1754 (1998) #:pl.E.max.1:who: #:pl.E.max.1:date:12-DEC-1998 #:pl.E.max.1:strain:1 small subunit ribosomal RNA gene, plastid gene for plastid #:pl.E.max.1:title:Plastids are widespread and ancient in parasites of the #:pl.E.max.1:rem:ref:1 (bases 1 to 1013) #:pl.E.max.1:rem:ref:2 (bases 1 to 1013) #:pl.E.max.1:rem:auth:Lang-Unnasch,N., Reith,M.E. and Munholland,J. #:pl.E.max.1:rem:jour:Submitted (05-JAN-1998) Geographic Medicine, University #:pl.E.max.1:rem:: of Alabama at Birmingham, 845 South 19th St., Birmingham, #:pl.E.max.1:rem:: AL 35294-2170, USA #:pl.E.max.1:rem:title:Direct Submission #:pl.E.max.1:rem:KEYWORDS:. #:pl.E.max.1:rem:GenBank ACCESSION:AF0409 5 #:pl.E.max.2:name:Chloroplast Eimeria maxima. #:pl.E.max.2:subsp: #:pl.E.max.2:strain:2 small subunit ribosomal RNA gene, plastid gene for plastid #:pl.E.max.2:atcc: #:pl.E.max.2:acs:AF040976 #:pl.E.max.2:auth:Lang-Unnasch,N., Reith,M.E., Munholland,J. and Barta,J.R. #:pl.E.max.2:title:Plastids are widespread and ancient in parasites of the #:pl.E.max.2:jour:Int. J. Parasitol. 28 (11), 1743-1754 (1998) #:pl.E.max.2:who: #:pl.E.max.2:date:12-DEC-1998 #:pl.E.max.2:strain:RNA, partial sequence #:pl.E.max.2:title:phylum Apicomplexa #:pl.E.max.2:rem:ref:1 (bases 1 to 998) #:pl.E.max.2:rem:ref:2 (bases 1 to 998) #:pl.E.max.2:rem:auth:Lang-Unnasch,N., Reith,M.E. and Munholland,J. #:pl.E.max.2:rem:jour:Submitted (05-JAN-1998) Geographic Medicine, University #:pl.E.max.2:rem:: of Alabama at Birmingham, 845 South 19th St., Birmingham, #:pl.E.max.2:rem:: AL 35294-2170, USA #:pl.E.max.2:rem:title:Direct Submission #:pl.E.max.2:rem:KEYWORDS:. #:pl.E.max.2:rem:GenBank ACCESSION:AF0409 6 #:pl.E.melea:name:Chloroplast Eimeria meleagrimitis. #:pl.E.melea:subsp: #:pl.E.melea:strain: #:pl.E.melea:atcc: #:pl.E.melea:acs:AF040970 #:pl.E.melea:auth:Lang-Unnasch,N., Reith,M.E., Munholland,J. and Barta,J.R. #:pl.E.melea:title:Plastids are widespread and ancient in parasites of the #:pl.E.melea:jour:Int. J. Parasitol. 28 (11), 1743-1754 (1998) #:pl.E.melea:who: #:pl.E.melea:date:12-DEC-1998 #:pl.E.melea:title:phylum Apicomplexa #:pl.E.melea:rem:ref:1 (bases 1 to 1003) #:pl.E.melea:rem:ref:2 (bases 1 to 1003) #:pl.E.melea:rem:auth:Lang-Unnasch,N., Reith,M.E. and Munholland,J. #:pl.E.melea:rem:jour:Submitted (05-JAN-1998) Geographic Medicine, University #:pl.E.melea:rem:: of Alabama at Birmingham, 845 South 19th St., Birmingham, #:pl.E.melea:rem:: AL 35294-2170, USA #:pl.E.melea:rem:title:Direct Submission #:pl.E.melea:rem:KEYWORDS:. #:pl.E.melea:rem:GenBank ACCESSION:AF0409 0 #:pl.E.tenel:name:Chloroplast Eimeria tenella. #:pl.E.tenel:subsp: #:pl.E.tenel:strain: #:pl.E.tenel:atcc: #:pl.E.tenel:acs:AF040971 #:pl.E.tenel:auth:Lang-Unnasch,N., Reith,M.E., Munholland,J. and Barta,J.R. #:pl.E.tenel:title:Plastids are widespread and ancient in parasites of the #:pl.E.tenel:jour:Int. J. Parasitol. 28 (11), 1743-1754 (1998) #:pl.E.tenel:who: #:pl.E.tenel:date:12-DEC-1998 #:pl.E.tenel:title:phylum Apicomplexa #:pl.E.tenel:rem:ref:1 (bases 1 to 1012) #:pl.E.tenel:rem:ref:2 (bases 1 to 1012) #:pl.E.tenel:rem:auth:Lang-Unnasch,N., Reith,M.E. and Munholland,J. #:pl.E.tenel:rem:jour:Submitted (05-JAN-1998) Geographic Medicine, University #:pl.E.tenel:rem:: of Alabama at Birmingham, 845 South 19th St., Birmingham, #:pl.E.tenel:rem:: AL 35294-2170, USA #:pl.E.tenel:rem:title:Direct Submission #:pl.E.tenel:rem:KEYWORDS:. #:pl.E.tenel:rem:GenBank ACCESSION:AF0409 1 #:pl.N.canin:name:Chloroplast Neospora caninum. #:pl.N.canin:subsp: #:pl.N.canin:strain: #:pl.N.canin:atcc: #:pl.N.canin:acs:AF040973 #:pl.N.canin:auth:Lang-Unnasch,N., Reith,M.E., Munholland,J. and Barta,J.R. #:pl.N.canin:title:Plastids are widespread and ancient in parasites of the #:pl.N.canin:jour:Int. J. Parasitol. 28 (11), 1743-1754 (1998) #:pl.N.canin:who: #:pl.N.canin:date:12-DEC-1998 #:pl.N.canin:title:phylum Apicomplexa #:pl.N.canin:rem:ref:1 (bases 1 to 1021) #:pl.N.canin:rem:ref:2 (bases 1 to 1021) #:pl.N.canin:rem:auth:Lang-Unnasch,N., Reith,M.E. and Munholland,J. #:pl.N.canin:rem:jour:Submitted (05-JAN-1998) Geographic Medicine, University #:pl.N.canin:rem:: of Alabama at Birmingham, 845 South 19th St., Birmingham, #:pl.N.canin:rem:: AL 35294-2170, USA #:pl.N.canin:rem:title:Direct Submission #:pl.N.canin:rem:KEYWORDS:. #:pl.N.canin:rem:GenBank ACCESSION:AF0409 3 #:pl.T.gon.1:name: #:pl.T.gon.1:subsp: #:pl.T.gon.1:strain: #:pl.T.gon.1:atcc: #:pl.T.gon.1:acs:U18086 #:pl.T.gon.1:auth: #:pl.T.gon.1:title: #:pl.T.gon.1:jour: #:pl.T.gon.1:who: #:pl.T.gon.1:date: #:pl.T.gon.2:name:Toxoplasma gondii. #:pl.T.gon.2:subsp: #:pl.T.gon.2:strain: #:pl.T.gon.2:atcc: #:pl.T.gon.2:acs:Y11430 #:pl.T.gon.2:auth:Denny,P., Preiser,P., Williamson,D. and Wilson,I. #:pl.T.gon.2:title:apicomplexans #:pl.T.gon.2:jour:Protist 149, 51-59 (1998) #:pl.T.gon.2:who: #:pl.T.gon.2:date:31-JUL-1998 #:pl.T.gon.2:title:Evidence for a single origin of the 35 kb plastid DNA in #:pl.T.gon.2:rem:ref:1 (bases 1 to 6113) #:pl.T.gon.2:rem:ref:2 (bases 1 to 6113) #:pl.T.gon.2:rem:auth:Denny,P.W. #:pl.T.gon.2:rem:jour:Submitted (24-FEB-1997) P.W. Denny, National Institute #:pl.T.gon.2:rem:: for Medical Research, Mill Hill, London, NW7 1AA, UK #:pl.T.gon.2:rem:title:Direct Submission #:pl.T.gon.2:rem:KEYWORDS:16S ribosomal RNA; 16S rRNA; 23S ribosomal RNA; 23S #:pl.T.gon.2:rem:: rRNA; ORF470; plastid DNA; transfer RNA-Ala; transfer #:pl.T.gon.2:rem:: RNA-Arg; transfer RNA-Asn; transfer RNA-Leu; transfer #:pl.T.gon.2:rem:: RNA-Met; transfer RNA-Thr; transfer RNA-Val; tRNA-Ala; #:pl.T.gon.2:rem:: tRNA-Arg; tRNA-Asn; tRNA-Leu; tRNA-Met; tRNA-Thr; tRNA-Val. #:pl.T.gon.2:rem:GenBank ACCESSION:Y11430 #:pl.H.cates:name:Chloroplast Hepatozoon catesbianae. #:pl.H.cates:subsp: #:pl.H.cates:strain: #:pl.H.cates:atcc: #:pl.H.cates:acs:AF040972 #:pl.H.cates:auth:Lang-Unnasch,N., Reith,M.E., Munholland,J. and Barta,J.R. #:pl.H.cates:title:Plastids are widespread and ancient in parasites of the #:pl.H.cates:jour:Int. J. Parasitol. 28 (11), 1743-1754 (1998) #:pl.H.cates:who: #:pl.H.cates:date:12-DEC-1998 #:pl.H.cates:title:phylum Apicomplexa #:pl.H.cates:rem:ref:1 (bases 1 to 939) #:pl.H.cates:rem:ref:2 (bases 1 to 939) #:pl.H.cates:rem:auth:Lang-Unnasch,N., Reith,M.E. and Munholland,J. #:pl.H.cates:rem:jour:Submitted (05-JAN-1998) Geographic Medicine, University #:pl.H.cates:rem:: of Alabama at Birmingham, 845 South 19th St., Birmingham, #:pl.H.cates:rem:: AL 35294-2170, USA #:pl.H.cates:rem:title:Direct Submission #:pl.H.cates:rem:KEYWORDS:. #:pl.H.cates:rem:GenBank ACCESSION:AF0409 2 #:pl.P.falci:name: #:pl.P.falci:subsp: #:pl.P.falci:strain: #:pl.P.falci:atcc: #:pl.P.falci:acs:X57167 X95275 #:pl.P.falci:auth: #:pl.P.falci:title: #:pl.P.falci:jour: #:pl.P.falci:who: #:pl.P.falci:date: #:pl.P.falci:rem:DEFINITION P.falciparum organellar gene for small subunit ribosomal RNA #:pl.P.falci:rem:SOURCE Plasmodium falciparum DNA. #:pl.P.falci:rem: ORGANISM Plasmodium falciparum #:pl.P.falci:rem: Eukaryota; Animalia; Protozoa; Microspora; Microsporea; #:pl.P.falci:rem: Microsporida; Haemosporina; Plasmodiidae. #:pl.P.falci:rem:REFERENCE 1 (bases 1 to 1498) #:pl.P.falci:rem: AUTHORS Gardner,M.J., Feagin,J.E., Moore,D.J., Spencer,D.F., Gray,M.W., #:pl.P.falci:rem: Williamson,D.H. and Wilson,R.J. #:pl.P.falci:rem: TITLE Organization and expression of small subunit ribosomal RNA genes #:pl.P.falci:rem: encoded by a 35-kb circular DNA in Plasmodium falciparum #:pl.P.falci:rem: JOURNAL Mol. Biochem. Parasitol. 48, 77-88 (1991) #:pl.P.falci:rem:COMMENT *source: strain=C10; *source: stage=erythrocytic; *source: clone= #:pl.P.falci:rem: pf5, pf6b, pfS2, lambda E42; #:pl.P.falci:rem: See M23443 for overlapping sequence #:pl.P.falci:rem: From EMBL entry PFORGA; dated 23-AUG-1991. #:pl.P.falci:rem:FEATURES Location/Qualifiers #:pl.P.falci:rem: rRNA 54..1480 #:pl.P.falci:rem: /product="SSU ribosomal RNA" #:pl.P.vivax:name:Chloroplast Plasmodium vivax. #:pl.P.vivax:subsp: #:pl.P.vivax:strain: #:pl.P.vivax:atcc: #:pl.P.vivax:acs:AF040974 #:pl.P.vivax:auth:Lang-Unnasch,N., Reith,M.E., Munholland,J. and Barta,J.R. #:pl.P.vivax:title:Plastids are widespread and ancient in parasites of the #:pl.P.vivax:jour:Int. J. Parasitol. 28 (11), 1743-1754 (1998) #:pl.P.vivax:who: #:pl.P.vivax:date:12-DEC-1998 #:pl.P.vivax:title:phylum Apicomplexa #:pl.P.vivax:rem:ref:1 (bases 1 to 949) #:pl.P.vivax:rem:ref:2 (bases 1 to 949) #:pl.P.vivax:rem:auth:Lang-Unnasch,N., Reith,M.E. and Munholland,J. #:pl.P.vivax:rem:jour:Submitted (05-JAN-1998) Geographic Medicine, University #:pl.P.vivax:rem:: of Alabama at Birmingham, 845 South 19th St., Birmingham, #:pl.P.vivax:rem:: AL 35294-2170, USA #:pl.P.vivax:rem:title:Direct Submission #:pl.P.vivax:rem:KEYWORDS:. #:pl.P.vivax:rem:GenBank ACCESSION:AF0409 4 #:pl.Bab.big:name:Chloroplast Babesia bigemina. #:pl.Bab.big:subsp: #:pl.Bab.big:strain: #:pl.Bab.big:atcc: #:pl.Bab.big:acs:AF040968 #:pl.Bab.big:auth:Lang-Unnasch,N., Reith,M.E., Munholland,J. and Barta,J.R. #:pl.Bab.big:title:phylum Apicomplexa #:pl.Bab.big:jour:Int. J. Parasitol. 28 (11), 1743-1754 (1998) #:pl.Bab.big:who: #:pl.Bab.big:date:12-DEC-1998 #:pl.Bab.big:title:Plastids are widespread and ancient in parasites of the #:pl.Bab.big:rem:ref:1 (bases 1 to 961) #:pl.Bab.big:rem:ref:2 (bases 1 to 961) #:pl.Bab.big:rem:auth:Lang-Unnasch,N., Reith,M.E. and Munholland,J. #:pl.Bab.big:rem:jour:Submitted (05-JAN-1998) Geographic Medicine, University #:pl.Bab.big:rem:: of Alabama at Birmingham, 845 South 19th St., Birmingham, #:pl.Bab.big:rem:: AL 35294-2170, USA #:pl.Bab.big:rem:title:Direct Submission #:pl.Bab.big:rem:KEYWORDS:. #:pl.Bab.big:rem:GenBank ACCESSION:AF0409 8 #:pl.B.bov.1:name:Babesia bovis. #:pl.B.bov.1:subsp: #:pl.B.bov.1:strain: #:pl.B.bov.1:atcc: #:pl.B.bov.1:acs:U06105 #:pl.B.bov.1:auth:Gozar,M.M. and Bagnara,A.S. #:pl.B.bov.1:title:Babesia bovis: Nucleotide Sequence, Secondary Structure of #:pl.B.bov.1:jour:Int. J. Parasit. 25, 929-938 (1995) #:pl.B.bov.1:who: #:pl.B.bov.1:date:29-NOV-1995 #:pl.B.bov.1:title:the Transcript and Preliminary Phylogenetic Analysis #:pl.B.bov.1:title:An Organelle-like Small Subunit Ribosomal RNA Gene from #:pl.B.bov.1:rem:ref:1 (bases 1 to 1448) #:pl.B.bov.1:rem:ref:2 (bases 1 to 1448) #:pl.B.bov.1:rem:auth:Gozar,M.M. #:pl.B.bov.1:rem:jour:Submitted (03-FEB-1994) Mary M. Gozar, Biochemistry and #:pl.B.bov.1:rem:: Molecular Genetics, University of New South Wales, #:pl.B.bov.1:rem:: Kensington (Sydney), NSW 2033, Australia #:pl.B.bov.1:rem:title:Direct Submission #:pl.B.bov.1:rem:KEYWORDS:. #:pl.B.bov.1:rem:GenBank ACCESSION:U06105 #:pl.B.bov.2:name:Chloroplast Babesia bovis. #:pl.B.bov.2:subsp: #:pl.B.bov.2:strain: #:pl.B.bov.2:atcc: #:pl.B.bov.2:acs:AF040969 #:pl.B.bov.2:auth:Lang-Unnasch,N., Reith,M.E., Munholland,J. and Barta,J.R. #:pl.B.bov.2:title:phylum Apicomplexa #:pl.B.bov.2:jour:Int. J. Parasitol. 28 (11), 1743-1754 (1998) #:pl.B.bov.2:who: #:pl.B.bov.2:date:12-DEC-1998 #:pl.B.bov.2:title:Plastids are widespread and ancient in parasites of the #:pl.B.bov.2:rem:ref:1 (bases 1 to 963) #:pl.B.bov.2:rem:ref:2 (bases 1 to 963) #:pl.B.bov.2:rem:auth:Lang-Unnasch,N., Reith,M.E. and Munholland,J. #:pl.B.bov.2:rem:jour:Submitted (05-JAN-1998) Geographic Medicine, University #:pl.B.bov.2:rem:: of Alabama at Birmingham, 845 South 19th St., Birmingham, #:pl.B.bov.2:rem:: AL 35294-2170, USA #:pl.B.bov.2:rem:title:Direct Submission #:pl.B.bov.2:rem:KEYWORDS:. #:pl.B.bov.2:rem:GenBank ACCESSION:AF0409 9 #:(3)-Chlora:name:Chlorarachniophyceae #:(3)-Chlora:subsp: #:(3)-Chlora:strain: #:(3)-Chlora:atcc: #:(3)-Chlora:acs:DIVIDER #:(3)-Chlora:auth: #:(3)-Chlora:title: #:(3)-Chlora:jour: #:(3)-Chlora:who:DAMBERGER, SIMON HEL,Porter B256,, #:(3)-Chlora:date:Thu Nov 17 08:53:47 1994 #:chl.Chl.re:name:Chlorarachnion reptans #:chl.Chl.re:subsp: #:chl.Chl.re:strain: #:chl.Chl.re:atcc: #:chl.Chl.re:acs:U21490 #:chl.Chl.re:auth: #:chl.Chl.re:title: #:chl.Chl.re:jour: #:chl.Chl.re:who: #:chl.Chl.re:date: #:chl.Chl.re:rem:LOCUS CRU21490 1436 bp rRNA PLN 16-MAR-1995 #:chl.Chl.re:rem:DEFINITION Chlorarachnion reptans chloroplast 16S small subunit rRNA gene. #:chl.Chl.re:rem:ACCESSION U21490 #:chl.Chl.re:rem:KEYWORDS . #:chl.Chl.re:rem:SOURCE Chlorarachnion reptans. #:chl.Chl.re:rem: ORGANISM Chloroplast Chlorarachnion reptans #:chl.Chl.re:rem: Eukaryotae; mitochondrial eukaryotes; eukaryote crown group; #:chl.Chl.re:rem: Chlorarachniophyceae; Chlorarachnion. #:chl.Chl.re:rem:REFERENCE 1 (bases 1 to 1436) #:chl.Chl.re:rem: AUTHORS McFadden,G.I., Gilson,P.R. and Waller,R.F. #:chl.Chl.re:rem: TITLE Molecular phylogeny of chlorarachniophytes based on plastid rRNA #:chl.Chl.re:rem: and rbcL sequences #:chl.Chl.re:rem: JOURNAL Arch. Protistenkunde 154 (1995) In press #:chl.Chl.re:rem:REFERENCE 2 (bases 1 to 1436) #:chl.Chl.re:rem: AUTHORS McFadden,G.I. #:chl.Chl.re:rem: TITLE Direct Submission #:chl.Chl.re:rem: JOURNAL Submitted (22-FEB-1995) Geoffrey I. McFadden, School of Botany, #:chl.Chl.re:rem: University of Melbourne, Parkville, VIC 3052, Australia #:chl.Chl.re:rem:COMMENT #:chl.Chl.re:rem: NCBI gi: 710413 #:chl.Chl.re:rem:FEATURES Location/Qualifiers #:chl.Chl.re:rem: source 1..1436 #:chl.Chl.re:rem: /clone="pF69" #:chl.Chl.re:rem: /strain="CCMP 238" #:chl.Chl.re:rem: /organism="Chlorarachnion reptans" #:chl.Chl.re:rem: /chloroplast #:chl.Chl.re:rem: rRNA 1..1436 #:chl.Chl.re:rem: /product="16S small subunit rRNA" #:chl.Chl.re:rem:BASE COUNT 421 a 287 c 384 g 342 t 2 others #:chl.Chl.re:rem:ORIGIN #:chl.Ch.240:name: #:chl.Ch.240:subsp: #:chl.Ch.240:strain: #:chl.Ch.240:atcc: #:chl.Ch.240:acs:U21491 #:chl.Ch.240:auth: #:chl.Ch.240:title: #:chl.Ch.240:jour: #:chl.Ch.240:who: #:chl.Ch.240:date: #:chl.Ch.240:rem:LOCUS CRU21491 1439 bp rRNA PLN 16-MAR-1995 #:chl.Ch.240:rem:DEFINITION Chlorarachnion sp. CCMP 240 chloroplast 16S small subunit rRNA #:chl.Ch.240:rem: gene. #:chl.Ch.240:rem:ACCESSION U21491 #:chl.Ch.240:rem:KEYWORDS . #:chl.Ch.240:rem:SOURCE Chlorarachnion sp. CCMP 240. #:chl.Ch.240:rem: ORGANISM Chloroplast Chlorarachnion sp. #:chl.Ch.240:rem: Eukaryotae; mitochondrial eukaryotes; eukaryote crown group; #:chl.Ch.240:rem: Chlorarachniophyceae; Chlorarachnion. #:chl.Ch.240:rem:REFERENCE 1 (bases 1 to 1439) #:chl.Ch.240:rem: AUTHORS McFadden,G.I., Gilson,P.R. and Waller,R.F. #:chl.Ch.240:rem: TITLE Molecular phylogeny of chlorarachniophytes based on plastid rRNA #:chl.Ch.240:rem: and rbcL sequences #:chl.Ch.240:rem: JOURNAL Arch. Protistenkunde 154 (1995) In press #:chl.Ch.240:rem:REFERENCE 2 (bases 1 to 1439) #:chl.Ch.240:rem: AUTHORS McFadden,G.I. #:chl.Ch.240:rem: TITLE Direct Submission #:chl.Ch.240:rem: JOURNAL Submitted (22-FEB-1995) Geoffrey I McFadden, School of Botany, #:chl.Ch.240:rem: University of Melbourne, Parkville, VIC, 3052, Australia #:chl.Ch.240:rem:COMMENT #:chl.Ch.240:rem: NCBI gi: 710414 #:chl.Ch.240:rem:FEATURES Location/Qualifiers #:chl.Ch.240:rem: source 1..1439 #:chl.Ch.240:rem: /clone="pF70" #:chl.Ch.240:rem: /strain="CCMP 240" #:chl.Ch.240:rem: /organism="Chlorarachnion sp." #:chl.Ch.240:rem: /chloroplast #:chl.Ch.240:rem: rRNA 1..1439 #:chl.Ch.240:rem: /product="16S small subunit rRNA" #:chl.Ch.240:rem:BASE COUNT 422 a 283 c 379 g 355 t #:chl.Ch.240:rem:ORIGIN #:chl.Ch.242:name: #:chl.Ch.242:subsp: #:chl.Ch.242:strain: #:chl.Ch.242:atcc: #:chl.Ch.242:acs:U21492 #:chl.Ch.242:auth: #:chl.Ch.242:title: #:chl.Ch.242:jour: #:chl.Ch.242:who: #:chl.Ch.242:date: #:chl.Ch.242:rem:LOCUS CRU21492 1434 bp rRNA PLN 16-MAR-1995 #:chl.Ch.242:rem:DEFINITION Chlorarachnion sp. CCMP 242 chloroplast 16S small subunit rRNA #:chl.Ch.242:rem: gene. #:chl.Ch.242:rem:ACCESSION U21492 #:chl.Ch.242:rem:KEYWORDS . #:chl.Ch.242:rem:SOURCE Chlorarachnion sp. CCMP 242. #:chl.Ch.242:rem: ORGANISM Chloroplast Chlorarachnion sp. #:chl.Ch.242:rem: Eukaryotae; mitochondrial eukaryotes; eukaryote crown group; #:chl.Ch.242:rem: Chlorarachniophyceae; Chlorarachnion. #:chl.Ch.242:rem:REFERENCE 1 (bases 1 to 1434) #:chl.Ch.242:rem: AUTHORS McFadden,G.I., Gilson,P.R. and Waller,R.F. #:chl.Ch.242:rem: TITLE Molecular phylogeny of chlorarachniophytes based on plastid rRNA #:chl.Ch.242:rem: and rbcL sequences #:chl.Ch.242:rem: JOURNAL Arch. Protistenkunde 154 (1995) In press #:chl.Ch.242:rem:REFERENCE 2 (bases 1 to 1434) #:chl.Ch.242:rem: AUTHORS McFadden,G.I. #:chl.Ch.242:rem: TITLE Direct Submission #:chl.Ch.242:rem: JOURNAL Submitted (22-FEB-1995) Geoffrey I McFadden, School of Botany, #:chl.Ch.242:rem: University of Melbourne, Parkville, VIC, 3052, Australia #:chl.Ch.242:rem:COMMENT #:chl.Ch.242:rem: NCBI gi: 710415 #:chl.Ch.242:rem:FEATURES Location/Qualifiers #:chl.Ch.242:rem: source 1..1434 #:chl.Ch.242:rem: /clone="pF71" #:chl.Ch.242:rem: /strain="CCMP 242" #:chl.Ch.242:rem: /organism="Chlorarachnion sp." #:chl.Ch.242:rem: /chloroplast #:chl.Ch.242:rem: rRNA 1..1434 #:chl.Ch.242:rem: /product="16S small subunit rRNA" #:chl.Ch.242:rem:BASE COUNT 421 a 283 c 384 g 346 t #:chl.Ch.242:rem:ORIGIN #:(3)-Crypto:name: #:(3)-Crypto:subsp: #:(3)-Crypto:strain: #:(3)-Crypto:atcc: #:(3)-Crypto:acs:DIVIDER #:(3)-Crypto:auth: #:(3)-Crypto:title: #:(3)-Crypto:jour: #:(3)-Crypto:who:DAMBERGER, SIMON HEL,Porter B256,, #:(3)-Crypto:date:Thu Nov 17 08:53:47 1994 #:chl.Cry.sp:name: #:chl.Cry.sp:subsp: #:chl.Cry.sp:strain: #:chl.Cry.sp:atcc: #:chl.Cry.sp:acs:X56806 #:chl.Cry.sp:auth: #:chl.Cry.sp:title: #:chl.Cry.sp:jour: #:chl.Cry.sp:who: #:chl.Cry.sp:date: #:chl.Cry.sp:rem:LOCUS CRYCP16SRN 1700 bp ss-rRNA RNA 30-OCT-1991 #:chl.Cry.sp:rem:DEFINITION Cryptomonas sp. gene for 16S ribosomal RNA #:chl.Cry.sp:rem:ACCESSION X56806 #:chl.Cry.sp:rem:KEYWORDS 16S ribosomal RNA. #:chl.Cry.sp:rem:SOURCE Chloroplast Cryptomonas sp. DNA. #:chl.Cry.sp:rem: ORGANISM Cryptomonas sp. #:chl.Cry.sp:rem: Eukaryota; Fungi; Chromophycota; Cryptophyceae; Cryptomonadales; #:chl.Cry.sp:rem: Cryptomonadaceae. #:chl.Cry.sp:rem:REFERENCE 1 (bases 1 to 1700) #:chl.Cry.sp:rem: AUTHORS Douglas,S.E. and Turner,S.M. #:chl.Cry.sp:rem: TITLE Molecular evidence for the origin of plastids from a #:chl.Cry.sp:rem: cyanobacterium-like ancestor #:chl.Cry.sp:rem: JOURNAL J. Mol. Evol. 33, 267-273 (1991) #:chl.Cry.sp:rem: STANDARD full automatic #:chl.Cry.sp:rem:COMMENT *source: strain=F; *source: clone=pBSc15.5; #:chl.Cry.sp:rem: From EMBL entry CS16SRN; dated 23-OCT-1991. #:chl.Cry.sp:rem:FEATURES Location/Qualifiers #:chl.Cry.sp:rem: -35_signal 68..73 #:chl.Cry.sp:rem: /note="P1" #:chl.Cry.sp:rem: -10_signal 88..93 #:chl.Cry.sp:rem: /note="P1" #:chl.Cry.sp:rem: -35_signal 119..124 #:chl.Cry.sp:rem: /note="P2" #:chl.Cry.sp:rem: -10_signal 139..144 #:chl.Cry.sp:rem: /note="P2" #:chl.Cry.sp:rem: rRNA 174..1666 #:chl.Cry.sp:rem: /gene="16S rRNA" #:chl.Cry.sp:rem:BASE COUNT 494 a 326 c 458 g 422 t #:chl.Cry.sp:rem:ORIGIN #:chl.G.th.1:name:Chloroplast Guillardia theta. #:chl.G.th.1:subsp: #:chl.G.th.1:strain: #:chl.G.th.1:atcc: #:chl.G.th.1:acs:AF0414 #:chl.G.th.1:auth:Douglas,S.E. and Durnford,D.G. #:chl.G.th.1:title:The small subunit of ribulose-1,5-bisphosphate carboxylase is #:chl.G.th.1:jour:Plant Mol. Biol. 13 (1), 13-20 (1989) #:chl.G.th.1:who: #:chl.G.th.1:date:15-SEP-1998 #:chl.G.th.1:title:plastid-encoded in the chlorophyll c-containing alga #:chl.G.th.1:title:Cryptomonas phi #:chl.G.th.1:rem:ref:1 (bases 47701 to 48415) #:chl.G.th.1:rem:ref:2 (bases 45872 to 47981) #:chl.G.th.1:rem:auth:Douglas,S.E., Durnford,D.G. and Morden,C.W. #:chl.G.th.1:rem:jour:J. Phycol. 26, 500-508 (1990) #:chl.G.th.1:rem:title:Nucleotide sequence of the gene for the large subunit of #:chl.G.th.1:rem:: ribulose-1,5-bisphosphate carboxylase/oxygenase from the #:chl.G.th.1:rem:: chlorophyll c-containing Alga Cryptomonas F: evidence #:chl.G.th.1:rem:: supporting the polyphyletic origin of plastids #:chl.G.th.1:rem:ref:3 (bases 43739 to 44938) #:chl.G.th.1:rem:auth:Douglas,S.E. and Durnford,D.G. #:chl.G.th.1:rem:jour:Nucleic Acids Res. 18 (7), 1903 (1990) #:chl.G.th.1:rem:title:Nucleotide sequence of the genes for ribosomal protein #:chl.G.th.1:rem:: S4 and tRNA(Arg) from the chlorophyll c-containing alga #:chl.G.th.1:rem:: Cryptomonas phi #:chl.G.th.1:rem:ref:4 (bases 18535 to 19351) #:chl.G.th.1:rem:auth:Douglas,S.E. and Durnford,D.G. #:chl.G.th.1:rem:jour:DNA Seq. 1 (1), 55-62 (1990) #:chl.G.th.1:rem:title:Sequence analysis of the plastid rDNA spacer region of #:chl.G.th.1:rem:: the chlorophyll c-containing alga Cryptomonas phi #:chl.G.th.1:rem:ref:5 (bases 34539 to 35380) #:chl.G.th.1:rem:auth:Reith,M. and Douglas,S. #:chl.G.th.1:rem:jour:Plant Mol. Biol. 15 (4), 585-592 (1990) #:chl.G.th.1:rem:title:Localization of beta-phycoerythrin to the thylakoid #:chl.G.th.1:rem:: lumen of Cryptomonas phi does not involve a signal peptide #:chl.G.th.1:rem:ref:6 (bases 110917 to 113854) #:chl.G.th.1:rem:auth:Douglas,S.E. #:chl.G.th.1:rem:jour:Curr. Genet. 19 (4), 289-294 (1991) #:chl.G.th.1:rem:title:Unusual organization of a ribosomal protein operon in #:chl.G.th.1:rem:: the plastid genome of Cryptomonas phi: evolutionary #:chl.G.th.1:rem:: considerations #:chl.G.th.1:rem:ref:7 (bases 40675 to 42376) #:chl.G.th.1:rem:auth:Douglas,S.E. and Turner,S. #:chl.G.th.1:rem:jour:J. Mol. Evol. 33 (3), 267-273 (1991) #:chl.G.th.1:rem:title:Molecular evidence for the origin of plastids from a #:chl.G.th.1:rem:: cyanobacterium-like ancestor #:chl.G.th.1:rem:ref:8 (bases 96129 to 98906) #:chl.G.th.1:rem:auth:Wang,S.L. and Liu,X.Q. #:chl.G.th.1:rem:jour:Proc. Natl. Acad. Sci. U.S.A. 88 (23), 10783-10787 (1991) #:chl.G.th.1:rem:title:The plastid genome of Cryptomonas phi encodes an #:chl.G.th.1:rem:: hsp70-like protein, a histone-like protein, and an acyl #:chl.G.th.1:rem:: carrier protein #:chl.G.th.1:rem:ref:9 (bases 106789 to 108216) #:chl.G.th.1:rem:auth:Douglas,S.E. #:chl.G.th.1:rem:jour:FEBS Lett. 298 (1), 93-96 (1992) #:chl.G.th.1:rem:title:A secY homologue is found in the plastid genome of #:chl.G.th.1:rem:: Cryptomonas phi #:chl.G.th.1:rem:ref:10 (bases 42198 to 44153) #:chl.G.th.1:rem:auth:Douglas,S.E. and Reith,M.E. #:chl.G.th.1:rem:jour:J. Mar. Biotechnol. 1, 135-141 (1993) #:chl.G.th.1:rem:title:A bchI homolog, encoding a subunit of Mg chelatase, is #:chl.G.th.1:rem:: located on the plastid genomes of red and cryptomonad algae #:chl.G.th.1:rem:ref:11 (bases 82327 to 84479) #:chl.G.th.1:rem:auth:Douglas,S.E. and Murphy,C.A. #:chl.G.th.1:rem:jour:J. Phycol. 30, 329-340 (1994) #:chl.G.th.1:rem:title:Structural, transcriptional and phylogenetic analyses of #:chl.G.th.1:rem:: the atpB gene cluster from the plastid of Cryptomonas F #:chl.G.th.1:rem:: (Cryptophyceae) #:chl.G.th.1:rem:ref:12 (bases 98901 to 114602) #:chl.G.th.1:rem:auth:Wang,S.L., Liu,X.Q. and Douglas,S.E. #:chl.G.th.1:rem:jour:Biochem. Mol. Biol. Int. 41 (5), 1035-1044 (1997) #:chl.G.th.1:rem:title:The large ribosomal protein gene cluster of a #:chl.G.th.1:rem:: cryptomonad plastid: gene organization, sequence and #:chl.G.th.1:rem:: evolutionary implications #:chl.G.th.1:rem:ref:13 (bases 61067 to 68605) #:chl.G.th.1:rem:auth:Leitsch,C.E.W., Kowallik,K.V. and Douglas,S.E. #:chl.G.th.1:rem:jour:J. Phycol. (1998) In press #:chl.G.th.1:rem:title:The atpA gene cluster of a cryptomonad, Guillardia theta: #:chl.G.th.1:rem:: A piece in the puzzle of chloroplast genome development #:chl.G.th.1:rem:ref:14 (bases 1 to 121524) #:chl.G.th.1:rem:auth:Douglas,S.E. and Penny,S.L. #:chl.G.th.1:rem:jour:J. Mol. Evol. (1998) In press #:chl.G.th.1:rem:title:The plastid genome from the cryptomonad alga, Guillardia #:chl.G.th.1:rem:: theta: complete sequence and conserved synteny groups #:chl.G.th.1:rem:: confirm its common ancestry with red algae #:chl.G.th.1:rem:ref:15 (bases 1 to 121524) #:chl.G.th.1:rem:auth:Douglas,S.E. #:chl.G.th.1:rem:jour:Submitted (08-JAN-1998) Institute for Marine Biosciences, #:chl.G.th.1:rem:: National Research Council, 1411 Oxford Street, Halifax, #:chl.G.th.1:rem:: Nova Scotia B3H 3Z1, Canada #:chl.G.th.1:rem:title:Direct Submission #:chl.G.th.1:rem:KEYWORDS:. #:chl.G.th.1:rem:GenBank ACCESSION:AF0414 8 X141 1 X623 9 X515 1 X145 4 X521 8 #:chl.G.th.1:rem:: X529 2 X568 6 M765 #:chl.G.th.2:name:Chloroplast Guillardia theta. #:chl.G.th.2:subsp: #:chl.G.th.2:strain: #:chl.G.th.2:atcc: #:chl.G.th.2:acs:AF0414 #:chl.G.th.2:auth:Douglas,S.E. and Durnford,D.G. #:chl.G.th.2:title:The small subunit of ribulose-1,5-bisphosphate carboxylase is #:chl.G.th.2:jour:Plant Mol. Biol. 13 (1), 13-20 (1989) #:chl.G.th.2:who: #:chl.G.th.2:date:15-SEP-1998 #:chl.G.th.2:title:plastid-encoded in the chlorophyll c-containing alga #:chl.G.th.2:title:Cryptomonas phi #:chl.G.th.2:rem:ref:1 (bases 47701 to 48415) #:chl.G.th.2:rem:ref:2 (bases 45872 to 47981) #:chl.G.th.2:rem:auth:Douglas,S.E., Durnford,D.G. and Morden,C.W. #:chl.G.th.2:rem:jour:J. Phycol. 26, 500-508 (1990) #:chl.G.th.2:rem:title:Nucleotide sequence of the gene for the large subunit of #:chl.G.th.2:rem:: ribulose-1,5-bisphosphate carboxylase/oxygenase from the #:chl.G.th.2:rem:: chlorophyll c-containing Alga Cryptomonas F: evidence #:chl.G.th.2:rem:: supporting the polyphyletic origin of plastids #:chl.G.th.2:rem:ref:3 (bases 43739 to 44938) #:chl.G.th.2:rem:auth:Douglas,S.E. and Durnford,D.G. #:chl.G.th.2:rem:jour:Nucleic Acids Res. 18 (7), 1903 (1990) #:chl.G.th.2:rem:title:Nucleotide sequence of the genes for ribosomal protein #:chl.G.th.2:rem:: S4 and tRNA(Arg) from the chlorophyll c-containing alga #:chl.G.th.2:rem:: Cryptomonas phi #:chl.G.th.2:rem:ref:4 (bases 18535 to 19351) #:chl.G.th.2:rem:auth:Douglas,S.E. and Durnford,D.G. #:chl.G.th.2:rem:jour:DNA Seq. 1 (1), 55-62 (1990) #:chl.G.th.2:rem:title:Sequence analysis of the plastid rDNA spacer region of #:chl.G.th.2:rem:: the chlorophyll c-containing alga Cryptomonas phi #:chl.G.th.2:rem:ref:5 (bases 34539 to 35380) #:chl.G.th.2:rem:auth:Reith,M. and Douglas,S. #:chl.G.th.2:rem:jour:Plant Mol. Biol. 15 (4), 585-592 (1990) #:chl.G.th.2:rem:title:Localization of beta-phycoerythrin to the thylakoid #:chl.G.th.2:rem:: lumen of Cryptomonas phi does not involve a signal peptide #:chl.G.th.2:rem:ref:6 (bases 110917 to 113854) #:chl.G.th.2:rem:auth:Douglas,S.E. #:chl.G.th.2:rem:jour:Curr. Genet. 19 (4), 289-294 (1991) #:chl.G.th.2:rem:title:Unusual organization of a ribosomal protein operon in #:chl.G.th.2:rem:: the plastid genome of Cryptomonas phi: evolutionary #:chl.G.th.2:rem:: considerations #:chl.G.th.2:rem:ref:7 (bases 40675 to 42376) #:chl.G.th.2:rem:auth:Douglas,S.E. and Turner,S. #:chl.G.th.2:rem:jour:J. Mol. Evol. 33 (3), 267-273 (1991) #:chl.G.th.2:rem:title:Molecular evidence for the origin of plastids from a #:chl.G.th.2:rem:: cyanobacterium-like ancestor #:chl.G.th.2:rem:ref:8 (bases 96129 to 98906) #:chl.G.th.2:rem:auth:Wang,S.L. and Liu,X.Q. #:chl.G.th.2:rem:jour:Proc. Natl. Acad. Sci. U.S.A. 88 (23), 10783-10787 (1991) #:chl.G.th.2:rem:title:The plastid genome of Cryptomonas phi encodes an #:chl.G.th.2:rem:: hsp70-like protein, a histone-like protein, and an acyl #:chl.G.th.2:rem:: carrier protein #:chl.G.th.2:rem:ref:9 (bases 106789 to 108216) #:chl.G.th.2:rem:auth:Douglas,S.E. #:chl.G.th.2:rem:jour:FEBS Lett. 298 (1), 93-96 (1992) #:chl.G.th.2:rem:title:A secY homologue is found in the plastid genome of #:chl.G.th.2:rem:: Cryptomonas phi #:chl.G.th.2:rem:ref:10 (bases 42198 to 44153) #:chl.G.th.2:rem:auth:Douglas,S.E. and Reith,M.E. #:chl.G.th.2:rem:jour:J. Mar. Biotechnol. 1, 135-141 (1993) #:chl.G.th.2:rem:title:A bchI homolog, encoding a subunit of Mg chelatase, is #:chl.G.th.2:rem:: located on the plastid genomes of red and cryptomonad algae #:chl.G.th.2:rem:ref:11 (bases 82327 to 84479) #:chl.G.th.2:rem:auth:Douglas,S.E. and Murphy,C.A. #:chl.G.th.2:rem:jour:J. Phycol. 30, 329-340 (1994) #:chl.G.th.2:rem:title:Structural, transcriptional and phylogenetic analyses of #:chl.G.th.2:rem:: the atpB gene cluster from the plastid of Cryptomonas F #:chl.G.th.2:rem:: (Cryptophyceae) #:chl.G.th.2:rem:ref:12 (bases 98901 to 114602) #:chl.G.th.2:rem:auth:Wang,S.L., Liu,X.Q. and Douglas,S.E. #:chl.G.th.2:rem:jour:Biochem. Mol. Biol. Int. 41 (5), 1035-1044 (1997) #:chl.G.th.2:rem:title:The large ribosomal protein gene cluster of a #:chl.G.th.2:rem:: cryptomonad plastid: gene organization, sequence and #:chl.G.th.2:rem:: evolutionary implications #:chl.G.th.2:rem:ref:13 (bases 61067 to 68605) #:chl.G.th.2:rem:auth:Leitsch,C.E.W., Kowallik,K.V. and Douglas,S.E. #:chl.G.th.2:rem:jour:J. Phycol. (1998) In press #:chl.G.th.2:rem:title:The atpA gene cluster of a cryptomonad, Guillardia theta: #:chl.G.th.2:rem:: A piece in the puzzle of chloroplast genome development #:chl.G.th.2:rem:ref:14 (bases 1 to 121524) #:chl.G.th.2:rem:auth:Douglas,S.E. and Penny,S.L. #:chl.G.th.2:rem:jour:J. Mol. Evol. (1998) In press #:chl.G.th.2:rem:title:The plastid genome from the cryptomonad alga, Guillardia #:chl.G.th.2:rem:: theta: complete sequence and conserved synteny groups #:chl.G.th.2:rem:: confirm its common ancestry with red algae #:chl.G.th.2:rem:ref:15 (bases 1 to 121524) #:chl.G.th.2:rem:auth:Douglas,S.E. #:chl.G.th.2:rem:jour:Submitted (08-JAN-1998) Institute for Marine Biosciences, #:chl.G.th.2:rem:: National Research Council, 1411 Oxford Street, Halifax, #:chl.G.th.2:rem:: Nova Scotia B3H 3Z1, Canada #:chl.G.th.2:rem:title:Direct Submission #:chl.G.th.2:rem:KEYWORDS:. #:chl.G.th.2:rem:GenBank ACCESSION:AF0414 8 X141 1 X623 9 X515 1 X145 4 X521 8 #:chl.G.th.2:rem:: X529 2 X568 6 M765 #:chl.P.sali:name:Pyrenomonas salina #:chl.P.sali:subsp: #:chl.P.sali:strain: #:chl.P.sali:atcc: #:chl.P.sali:acs:X55015 #:chl.P.sali:auth: #:chl.P.sali:title: #:chl.P.sali:jour: #:chl.P.sali:who: #:chl.P.sali:date: #:chl.P.sali:rem:LOCUS PYACPALP16 1490 bp ss-mRNA ORG 25-MAR-1992 #:chl.P.sali:rem:DEFINITION P.salina plastidal 16S ribosomal RNA #:chl.P.sali:rem:ACCESSION X55015 #:chl.P.sali:rem:KEYWORDS 16S ribosomal RNA. #:chl.P.sali:rem:SOURCE Chloroplast Pyrenomonas salina RNA. #:chl.P.sali:rem: ORGANISM Chloroplast Pyrenomonas salina #:chl.P.sali:rem: Eukaryota; Fungi; Chromophycota; Cryptophyceae; Cryptomonadales; #:chl.P.sali:rem: Cryptomonadaceae. #:chl.P.sali:rem:REFERENCE 1 (bases 1 to 1490) #:chl.P.sali:rem: AUTHORS Maerz,M., Wolters,J., Hofmann,C.J., Sitte,P. and Maier,U.G. #:chl.P.sali:rem: TITLE Plastid DNA from pyrenomonas salina (cryptophyceae): Physical map, #:chl.P.sali:rem: genes, and evolutionalry implications #:chl.P.sali:rem: JOURNAL Curr. Genet. 21, 73-81 (1992) #:chl.P.sali:rem: STANDARD full automatic #:chl.P.sali:rem:COMMENT From EMBL entry PSALP16S; dated 29-JAN-1992. #:chl.P.sali:rem:FEATURES Location/Qualifiers #:chl.P.sali:rem: rRNA <1..>1490 #:chl.P.sali:rem: /product="16S rRNA" #:chl.P.sali:rem:BASE COUNT 403 a 323 c 435 g 329 t #:chl.P.sali:rem:ORIGIN #:(3)-Glauco:name:Glaucocystophyceae #:(3)-Glauco:subsp: #:(3)-Glauco:strain: #:(3)-Glauco:atcc: #:(3)-Glauco:acs:DIVIDER #:(3)-Glauco:auth: #:(3)-Glauco:title: #:(3)-Glauco:jour: #:(3)-Glauco:who:DAMBERGER, SIMON HEL,Porter B256,, #:(3)-Glauco:date:Thu Nov 17 08:53:47 1994 #:Cya.par.cy:name:Cyanophora paradoxa cyanelle #:Cya.par.cy:subsp: #:Cya.par.cy:strain: #:Cya.par.cy:atcc: #:Cya.par.cy:acs:U30821 #:Cya.par.cy:auth: #:Cya.par.cy:title: #:Cya.par.cy:jour: #:Cya.par.cy:who: #:Cya.par.cy:date: #:Cya.par.cy:rem:LOCUS CPU30821 135599 bp DNA circular PLN 10-OCT-1995 #:Cya.par.cy:rem:DEFINITION Cyanophora paradoxa cyanelle, complete genome. #:Cya.par.cy:rem:ACCESSION U30821 #:Cya.par.cy:rem:KEYWORDS . #:Cya.par.cy:rem:SOURCE Cyanophora paradoxa. #:Cya.par.cy:rem: ORGANISM Cyanelle Cyanophora paradoxa #:Cya.par.cy:rem: Eukaryotae; mitochondrial eukaryotes; Glaucocystophyceae; #:Cya.par.cy:rem: Cyanophoraceae; Cyanophora. #:Cya.par.cy:rem:REFERENCE 1 (bases 1 to 135599) #:Cya.par.cy:rem: AUTHORS Stirewalt,V.L., Michalowski,C.B., Luffelhardt,W., Bohnert,H.J. and #:Cya.par.cy:rem: Bryant,D.A. #:Cya.par.cy:rem: TITLE Nucleotide sequence of the cyanelle genome from Cyanophora paradoxa #:Cya.par.cy:rem: JOURNAL Unpublished #:Cya.par.cy:rem:REFERENCE 2 (bases 1 to 135599) #:Cya.par.cy:rem: AUTHORS Bryant,D.A. #:Cya.par.cy:rem: TITLE Direct Submission #:Cya.par.cy:rem: JOURNAL Submitted (01-JUL-1995) Donald A. Bryant, Biochemistry and #:Cya.par.cy:rem: Molecular Biology, The Pennsylvania State University, S-234 Frear #:Cya.par.cy:rem: Bldg., University Park, PA 16802, USA #:Cya.par.cy:rem:COMMENT #:Cya.par.cy:rem: NCBI gi: 1016083 #:Cya.par.cy:rem:FEATURES Location/Qualifiers #:Cya.par.cy:rem: source 1..135599 #:Cya.par.cy:rem: /cyanelle #:Cya.par.cy:rem: /strain="Pringsheim LB555" #:Cya.par.cy:rem: /organism="Cyanophora paradoxa" #:Cya.par.cy:rem: repeat_region 1..11285 #:Cya.par.cy:rem: /note="IR-A" #:Cya.par.cy:rem: /rpt_type=inverted #:Cya.par.cy:rem: rRNA 294..1788 #:Cya.par.cy:rem: /gene="rrsA" #:Cya.par.cy:rem: /product="16S ribosomal RNA" #:Cya.par.cy:rem: tRNA 1889..1962 #:Cya.par.cy:rem: /gene="trnI" #:Cya.par.cy:rem: /note="anticodon (GAU)" #:Cya.par.cy:rem: /product="tRNA isoleucine" #:Cya.par.cy:rem: tRNA 1966..2038 #:Cya.par.cy:rem: /gene="trnA" #:Cya.par.cy:rem: /note="anticodon (UGC)" #:Cya.par.cy:rem: /product="tRNA alanine" #:Cya.par.cy:rem: rRNA 2076..5001 #:Cya.par.cy:rem: /gene="rrlA" #:Cya.par.cy:rem: /product="23S ribosomal RNA" #:Cya.par.cy:rem: rRNA 5102..5219 #:Cya.par.cy:rem: /gene="rrfA" #:Cya.par.cy:rem: /product="5S ribosomal RNA" #:Cya.par.cy:rem: CDS 5727..7598 #:Cya.par.cy:rem: /gene="dnaK" #:Cya.par.cy:rem: /note="NCBI gi: 1016084" #:Cya.par.cy:rem: /codon_start=1 #:Cya.par.cy:rem: /function="molecular chaperone; heat-shock protein; #:Cya.par.cy:rem: protein folding" #:Cya.par.cy:rem: /product="DnaK" #:Cya.par.cy:rem: /translation="MEVKHMGKIVGIDLGTTNSVVAVMEGGKPTVITNAEGFRTTPSV #:Cya.par.cy:rem: VAYTKTGDRLVGQIAKRQAVLNPGNTFYSVKRFIGRKFDEVTEEAKQVPYKVTGTQNV #:Cya.par.cy:rem: RIECPALQTSFTPEEISAQVLRKLAEDASKYIGEPVTQAVITVPAYFNDSQRQATKDA #:Cya.par.cy:rem: GKIAGLEVLRIINEPTAASLAYGLDKKKNETILVFDLGGGTFDVSILEVGDGVFEVLS #:Cya.par.cy:rem: TSGDTHLGGDDFDKKLVDFFIEEFQKLENINLREDQQALQRLTEAAEKAKIELSSVTQ #:Cya.par.cy:rem: TEITLPFLSLTPSGPKHFDTTLNRAKFEELCSTLIDRCRIPVETALKDAKLTKEDIDE #:Cya.par.cy:rem: VVLVGGSTRIPAVRELVQKVLDKVPKQSVNPDEVVAVGAAVQAGVLAGEVKDIVLLDV #:Cya.par.cy:rem: TPLSLGVETLGGVMSKIIVRNTTIPTQKSELFSTATDGQTNVEIHVLQGERGFAKDNK #:Cya.par.cy:rem: SLGTFRLDGIAPAPRGVPQIEVTFDIDANGILSVTAKDKGTGKEKSITITGASTLSQD #:Cya.par.cy:rem: EVERMVQEAEKNAAQDKENRQKIELRNQAESLINQAERQLKEFKLEPNVQAPIEQTIQ #:Cya.par.cy:rem: QLQTALKEDNLEQVQSLCQELQNSLLEIGKQVYSKTETTTPNKNEEDVIDASFSEEK" #:Cya.par.cy:rem:BASE COUNT 46690 a 21195 c 20119 g 47595 t #:Cya.par.cy:rem:ORIGIN #:chl.C.para:name:Cyanophora paradoxa #:chl.C.para:subsp: #:chl.C.para:strain: #:chl.C.para:atcc: #:chl.C.para:acs:X81840 #:chl.C.para:auth: #:chl.C.para:title: #:chl.C.para:jour: #:chl.C.para:who: #:chl.C.para:date: #:chl.C.para:rem:LOCUS Cpar16S_ 1514 BP #:chl.C.para:rem:DEFINITION Cyanophora paradoxa plastid 16S rRNA, Kies strain, X81840, #:chl.C.para:rem: d, Bhattacha #:chl.C.para:rem:ORIGIN #:chl.G.nost:name:Glaucocystis nostochinearum #:chl.G.nost:subsp: #:chl.G.nost:strain: #:chl.G.nost:atcc: #:chl.G.nost:acs:X82496 #:chl.G.nost:auth: #:chl.G.nost:title: #:chl.G.nost:jour: #:chl.G.nost:who: #:chl.G.nost:date: #:chl.G.nost:rem:LOCUS Gnos16S_ 1527 BP #:chl.G.nost:rem:DEFINITION Glaucocystis nostochinearum plastid 16S rRNA, SAG 45.88, X82496, #:chl.G.nost:rem: eleased, Bha #:chl.G.nost:rem:ORIGIN #:chl.G.vacu:name:Glaucosphaera vacuolata #:chl.G.vacu:subsp: #:chl.G.vacu:strain: #:chl.G.vacu:atcc: #:chl.G.vacu:acs:X81903 #:chl.G.vacu:auth: #:chl.G.vacu:title: #:chl.G.vacu:jour: #:chl.G.vacu:who: #:chl.G.vacu:date: #:chl.G.vacu:rem:LOCUS PGV16RNA 1507 bp DNA PLN 23-FEB-1995 #:chl.G.vacu:rem:DEFINITION G.vacuolata 16S rRNA gene (plastid encoded). #:chl.G.vacu:rem:ACCESSION X81903 #:chl.G.vacu:rem:KEYWORDS 16S rRNA; plastid 16S small subunit ribosomal RNA. #:chl.G.vacu:rem:SOURCE Glaucosphaera vacuolata. #:chl.G.vacu:rem: ORGANISM Glaucosphaera vacuolata #:chl.G.vacu:rem: Eukaryota; Plantae; Thallobionta; Cryptophyta; Cryptophyceae; #:chl.G.vacu:rem: Cryptomonadales; Glaucocystophyta; Glaucocystophyceae; #:chl.G.vacu:rem: Gloeochaetales; Glaucosphaeraceae. #:chl.G.vacu:rem:REFERENCE 1 (bases 1 to 1507) #:chl.G.vacu:rem: AUTHORS Bhattacharya,D. #:chl.G.vacu:rem: TITLE Direct Submission #:chl.G.vacu:rem: JOURNAL Submitted (26-SEP-1994) to the EMBL/GenBank/DDBJ databases. D. #:chl.G.vacu:rem: Bhattacharya, Botanisches Institut, Universitaet zu Koeln, #:chl.G.vacu:rem: Gyrhofstr. 15, Lehrstuhl I, 50931 Koeln, FRG #:chl.G.vacu:rem:REFERENCE 2 (bases 1 to 1507) #:chl.G.vacu:rem: AUTHORS Helmchen,T., Bhattacharya,D. and Melkonian,M. #:chl.G.vacu:rem: TITLE Analysis of ribosomal RNA sequences from Glaucocystophyte #:chl.G.vacu:rem: Cyanelles provide new insights into the evolutionary relationships #:chl.G.vacu:rem: of plastids #:chl.G.vacu:rem: JOURNAL Unpublished #:chl.G.vacu:rem:COMMENT #:chl.G.vacu:rem: NCBI gi: 683659 #:chl.G.vacu:rem:FEATURES Location/Qualifiers #:chl.G.vacu:rem: source 1..1507 #:chl.G.vacu:rem: /organism="Glaucosphaera vacuolata" #:chl.G.vacu:rem: /strain="SAG B 13.82" #:chl.G.vacu:rem: /note="plastid DNA" #:chl.G.vacu:rem: primer_bind 1..30 #:chl.G.vacu:rem: rRNA 31..1476 #:chl.G.vacu:rem: /product="plastid-encoded 16S small subunit ribosomal RNA" #:chl.G.vacu:rem: primer_bind 1477..1507 #:chl.G.vacu:rem:BASE COUNT 428 a 300 c 422 g 356 t 1 others #:chl.G.vacu:rem:ORIGIN #:chl.G.witt:name:Gloeochaete wittrockiana #:chl.G.witt:subsp: #:chl.G.witt:strain: #:chl.G.witt:atcc: #:chl.G.witt:acs:X82495 #:chl.G.witt:auth: #:chl.G.witt:title: #:chl.G.witt:jour:Gloeochaete wittrockiana plastid 16S rRNA, SAG B 46.84,??X81901??, #:chl.G.witt:who: leased, Bhat #:chl.G.witt:date: #:chl.G.witt:rem:LOCUS GW16SRRNA 1527 bp DNA PLN 23-FEB-1995 #:chl.G.witt:rem:DEFINITION G.wittrockiana plastid 16S rRNA gene. #:chl.G.witt:rem:ACCESSION X82495 #:chl.G.witt:rem:KEYWORDS 16S ribosomal RNA; 16S rRNA gene. #:chl.G.witt:rem:SOURCE Gloeochaete wittrockiana. #:chl.G.witt:rem: ORGANISM Gloeochaete wittrockiana #:chl.G.witt:rem: Eukaryota; Plantae; Thallobionta; Cryptophyta; Cryptophyceae; #:chl.G.witt:rem: Cryptomonadales; Glaucocystophyta; Glaucocystophyceae; #:chl.G.witt:rem: Gloeochaetales; Gloeochaetaceae. #:chl.G.witt:rem:REFERENCE 1 (bases 1 to 1527) #:chl.G.witt:rem: AUTHORS Bhattacharya,D. #:chl.G.witt:rem: TITLE Direct Submission #:chl.G.witt:rem: JOURNAL Submitted (03-NOV-1994) to the EMBL/GenBank/DDBJ databases. D. #:chl.G.witt:rem: Bhattacharya, Botanisches Institut, Universitaet zu Koeln, #:chl.G.witt:rem: Gyrhofstr. 15, Lehrstuhl I, 50931 Koeln, FRG #:chl.G.witt:rem:REFERENCE 2 (bases 1 to 1527) #:chl.G.witt:rem: AUTHORS Helmchen,T., Bhattacharya,D. and Melkonian,M. #:chl.G.witt:rem: TITLE Analyses of ribosomal RNA sequences from Glaucocystophyte #:chl.G.witt:rem: cyanelles provide new insights into the evolutionary relationships #:chl.G.witt:rem: of plastids #:chl.G.witt:rem: JOURNAL Unpublished #:chl.G.witt:rem:COMMENT #:chl.G.witt:rem: NCBI gi: 683568 #:chl.G.witt:rem:FEATURES Location/Qualifiers #:chl.G.witt:rem: source 1..1527 #:chl.G.witt:rem: /organism="Gloeochaete wittrockiana" #:chl.G.witt:rem: /sub_species="Lagerheim" #:chl.G.witt:rem: /strain="SAG B 46.84" #:chl.G.witt:rem: /note="plastid" #:chl.G.witt:rem: primer_bind 1..30 #:chl.G.witt:rem: rRNA <31..>1496 #:chl.G.witt:rem: /gene="16S rRNA" #:chl.G.witt:rem: /note="PCR amplified plastid DNA" #:chl.G.witt:rem: /product="16S small subunit ribosomal RNA" #:chl.G.witt:rem: primer_bind 1497..1527 #:chl.G.witt:rem:BASE COUNT 417 a 305 c 445 g 353 t 7 others #:chl.G.witt:rem:ORIGIN #:(3)-Haptop:name: #:(3)-Haptop:subsp: #:(3)-Haptop:strain: #:(3)-Haptop:atcc: #:(3)-Haptop:acs:DIVIDER #:(3)-Haptop:auth: #:(3)-Haptop:title: #:(3)-Haptop:jour: #:(3)-Haptop:who:DAMBERGER, SIMON HEL,Porter B256,, #:(3)-Haptop:date:Thu Nov 17 08:53:47 1994 #:chl.E.huxl:name:Emiliania huxleyi #:chl.E.huxl:subsp: #:chl.E.huxl:strain: #:chl.E.huxl:atcc: #:chl.E.huxl:acs:X82156 #:chl.E.huxl:auth: #:chl.E.huxl:title: #:chl.E.huxl:jour: #:chl.E.huxl:who: #:chl.E.huxl:date: #:chl.E.huxl:rem:LOCUS E.huxley 1495 BP #:chl.E.huxl:rem:DEFINITION emiliania huxleyi 16s plastid #:chl.Iso.sp:name:Isochrysis sp. #:chl.Iso.sp:subsp: #:chl.Iso.sp:strain: #:chl.Iso.sp:atcc: #:chl.Iso.sp:acs:X75518 #:chl.Iso.sp:auth: #:chl.Iso.sp:title: #:chl.Iso.sp:jour: #:chl.Iso.sp:who: #:chl.Iso.sp:date: #:chl.Iso.sp:rem:LOCUS PLPL16SR 1485 bp DNA PLN 08-JUN-1995 #:chl.Iso.sp:rem:DEFINITION Isochrysis sp. plastid 16S rRNA gene. #:chl.Iso.sp:rem:ACCESSION X75518 #:chl.Iso.sp:rem:KEYWORDS 16S ribosomal RNA. #:chl.Iso.sp:rem:SOURCE Isochrysis sp. #:chl.Iso.sp:rem: ORGANISM Isochrysis sp. #:chl.Iso.sp:rem: Eukaryota; Plantae; Thallobionta; Haptophyta; Prymnesiophyceae; #:chl.Iso.sp:rem: Prymnesiophytes; Isochrysis. #:chl.Iso.sp:rem:REFERENCE 1 (bases 1 to 1485) #:chl.Iso.sp:rem: AUTHORS Huss,V.A.R. #:chl.Iso.sp:rem: TITLE Direct Submission #:chl.Iso.sp:rem: JOURNAL Submitted (02-NOV-1993) to the EMBL/GenBank/DDBJ databases. V. A. #:chl.Iso.sp:rem: R. Huss, Inst fuer Botanik & Pharmazeutische, Biologie, #:chl.Iso.sp:rem: Universitaet Erlangen, Staudtstr. 5, 91058 Erlangen, FRG #:chl.Iso.sp:rem:REFERENCE 2 (bases 1 to 1485) #:chl.Iso.sp:rem: AUTHORS Huss,V.A.R., Horn,G. and Engel,H. #:chl.Iso.sp:rem: JOURNAL Unpublished #:chl.Iso.sp:rem:COMMENT #:chl.Iso.sp:rem: NCBI gi: 861084 #:chl.Iso.sp:rem:FEATURES Location/Qualifiers #:chl.Iso.sp:rem: source 1..1485 #:chl.Iso.sp:rem: /organism="Isochrysis sp." #:chl.Iso.sp:rem: /strain="SAG 927-2" #:chl.Iso.sp:rem: /note="plastid" #:chl.Iso.sp:rem: primer_bind 1..30 #:chl.Iso.sp:rem: /note="PCR amplification 5'-primer" #:chl.Iso.sp:rem: rRNA 1..1485 #:chl.Iso.sp:rem: /product="16S small subunit ribosomal RNA" #:chl.Iso.sp:rem: primer_bind complement(1463..1485) #:chl.Iso.sp:rem: /note="PCR amplification 3'-primer" #:chl.Iso.sp:rem:BASE COUNT 395 a 310 c 431 g 343 t 6 others #:chl.Iso.sp:rem:ORIGIN #:pl.O.neapo:name:Ochrosphaera neapolitana. #:pl.O.neapo:subsp: #:pl.O.neapo:strain: #:pl.O.neapo:atcc: #:pl.O.neapo:acs:X99077 #:pl.O.neapo:auth:Huss,V.A.R., Tietze,A.C. and Julius,C. #:pl.O.neapo:title: #:pl.O.neapo:jour:Unpublished #:pl.O.neapo:who: #:pl.O.neapo:date:24-JAN-1997 #:chl.Ochros:name:Ochrosphaera spec. #:chl.Ochros:subsp: #:chl.Ochros:strain: #:chl.Ochros:atcc: #:chl.Ochros:acs:X65101 #:chl.Ochros:auth: #:chl.Ochros:title: #:chl.Ochros:jour: #:chl.Ochros:who: #:chl.Ochros:date: #:chl.Ochros:rem:ID OSSSRRNA standard; DNA; ORG; 1483 BP. #:chl.Ochros:rem:XX #:chl.Ochros:rem:AC X65101; #:chl.Ochros:rem:XX #:chl.Ochros:rem:DT 08-APR-1992 (Rel. 31, Last updated, Version 1) #:chl.Ochros:rem:DT 08-APR-1992 (Rel. 31, Created) #:chl.Ochros:rem:XX #:chl.Ochros:rem:DE O.spec. plastid DNA for 16S-like rRNA small subunit #:chl.Ochros:rem:XX #:chl.Ochros:rem:KW small subunit ribosomal RNA. #:chl.Ochros:rem:XX #:chl.Ochros:rem:OS Ochrosphaera spec. #:chl.Ochros:rem:OC Eukaryota; Plantae; Thallobionta; Haptophyta; Prymnesiophyceae; #:chl.Ochros:rem:OC Isochrysidales; Isochrysidaceae. #:chl.Ochros:rem:XX #:chl.Ochros:rem:OG Plastid #:chl.Ochros:rem:XX #:chl.Ochros:rem:RN [1] #:chl.Ochros:rem:RP 1-1483 #:chl.Ochros:rem:RA Huss V.A.; #:chl.Ochros:rem:RT ; #:chl.Ochros:rem:RL Submitted (19-MAR-1992) on tape to the EMBL Data Library by: #:chl.Ochros:rem:RL V.A. Huss, Institut fuer Botanik und, Pharmazeutische Biologie, #:chl.Ochros:rem:RL Universitaet Erlangen, Staudtstr.5, W-8520 Erlangen, FRG #:chl.Ochros:rem:XX #:chl.Ochros:rem:RN [2] #:chl.Ochros:rem:RP 1-1483 #:chl.Ochros:rem:RA Huss V.A.R., Hirsh E., Giovannoni S.J.; #:chl.Ochros:rem:RT ; #:chl.Ochros:rem:RL Unpublished. #:chl.Ochros:rem:XX #:chl.Ochros:rem:CC *source: strain=181; #:chl.Ochros:rem:XX #:chl.Ochros:rem:FH Key Location/Qualifiers #:chl.Ochros:rem:FH #:chl.Ochros:rem:FT misc_feature 1..30 #:chl.Ochros:rem:FT /note="PCR amplification primer" #:chl.Ochros:rem:FT rRNA 1..1483 #:chl.Ochros:rem:FT /product="small subunit rRNA" #:chl.Ochros:rem:FT misc_feature 1460..1483 #:chl.Ochros:rem:FT /note="PCR amplification primer" #:chl.Ochros:rem:XX #:chl.Ochros:rem:SQ Sequence 1483 BP; 395 A; 311 C; 432 G; 341 T; 4 other; #:(3)-Rhodop:name: #:(3)-Rhodop:subsp: #:(3)-Rhodop:strain: #:(3)-Rhodop:atcc: #:(3)-Rhodop:acs:DIVIDER #:(3)-Rhodop:auth: #:(3)-Rhodop:title: #:(3)-Rhodop:jour: #:(3)-Rhodop:who:DAMBERGER, SIMON HEL,Porter B256,, #:(3)-Rhodop:date:Thu Nov 17 08:53:47 1994 #:chl.P.pu.1:name:Chloroplast Porphyra purpurea. #:chl.P.pu.1:subsp: #:chl.P.pu.1:strain: #:chl.P.pu.1:atcc: #:chl.P.pu.1:acs:U38804 #:chl.P.pu.1:auth:Reith,M.E. and Munholland,J. #:chl.P.pu.1:title:Complete nucleotide sequence of the Porphyra purpurea #:chl.P.pu.1:jour:Plant Mol. Biol. Rep. 13 (4), 333-335 (1995) #:chl.P.pu.1:who: #:chl.P.pu.1:date:25-APR-1996 #:chl.P.pu.1:title:chloroplast genome #:chl.P.pu.1:rem:rRNA- 147766..149261 #:chl.P.pu.1:rem:ref:1 (bases 1 to 191028) #:chl.P.pu.1:rem:ref:2 (bases 1 to 191028) #:chl.P.pu.1:rem:auth:Reith,M.E. #:chl.P.pu.1:rem:jour:Submitted (17-OCT-1995) Michael E. Reith, Marine Biology #:chl.P.pu.1:rem:: Section, NRC Institute for Marine Biosciences, 1411 Oxford #:chl.P.pu.1:rem:: Street, Halifax, Nova Scotia B3H 3Z1, Canada #:chl.P.pu.1:rem:title:Direct Submission #:chl.P.pu.1:rem:KEYWORDS:. #:chl.P.pu.1:rem:GenBank ACCESSION:U38804 #:chl.P.pu.A:name:Chloroplast Porphyra purpurea #:chl.P.pu.A:subsp: #:chl.P.pu.A:strain: #:chl.P.pu.A:atcc: #:chl.P.pu.A:acs:L07257 #:chl.P.pu.A:auth: #:chl.P.pu.A:title: #:chl.P.pu.A:jour: #:chl.P.pu.A:who: #:chl.P.pu.A:date: #:chl.P.pu.A:rem:LOCUS PTERGA 817 bp ds-DNA PLN 26-OCT-1993 #:chl.P.pu.A:rem:DEFINITION Porphyra purpurea chloroplast 16S ribosomal RNA gene, 5' end. #:chl.P.pu.A:rem:ACCESSION L07257 #:chl.P.pu.A:rem:KEYWORDS 16S ribosomal RNA; ribosomal RNA operon; rrnA operon. #:chl.P.pu.A:rem:SOURCE Chloroplast Porphyra purpurea (organelle Chloroplast Porphyra #:chl.P.pu.A:rem: purpurea) DNA. #:chl.P.pu.A:rem: ORGANISM Chloroplast Porphyra purpurea #:chl.P.pu.A:rem: Eukaryota; Rhodophycota; Rhodophyceae; Bangiophycideae; Bangiales; #:chl.P.pu.A:rem: Bangiaceae. #:chl.P.pu.A:rem:REFERENCE 1 (bases 1 to 817) #:chl.P.pu.A:rem: AUTHORS Reith,M.E. and Munholland,J.M. #:chl.P.pu.A:rem: TITLE The Ribosomal RNA repeats are non-identical and directly oriented #:chl.P.pu.A:rem: in the chloroplast genome of the red alga, Porphyra purpurea #:chl.P.pu.A:rem: JOURNAL Unpublished (1993) #:chl.P.pu.A:rem: STANDARD full automatic #:chl.P.pu.A:rem:FEATURES Location/Qualifiers #:chl.P.pu.A:rem: promoter 78..83 #:chl.P.pu.A:rem: /citation=[1] #:chl.P.pu.A:rem: /note="putative" #:chl.P.pu.A:rem: promoter 101..106 #:chl.P.pu.A:rem: /citation=[1] #:chl.P.pu.A:rem: /note="putative" #:chl.P.pu.A:rem: repeat_region 179..>817 #:chl.P.pu.A:rem: /function="ribosomal RNA operon" #:chl.P.pu.A:rem: /rpt_type=DIRECT #:chl.P.pu.A:rem: /evidence=EXPERIMENTAL #:chl.P.pu.A:rem: /citation=[1] #:chl.P.pu.A:rem: rRNA 186..>817 #:chl.P.pu.A:rem: /product="16S ribosomal RNA" #:chl.P.pu.A:rem: /gene="16S rRNA" #:chl.P.pu.A:rem: /citation=[1] #:chl.P.pu.A:rem: /note="The two copies of the 16S rRNA genes of Porphyra #:chl.P.pu.A:rem: purpurea differ at seven positions.; putative" #:chl.P.pu.A:rem: misc_difference replace(267,"g") #:chl.P.pu.A:rem: /citation=[1] #:chl.P.pu.A:rem: /note="one of seven known differences between the two #:chl.P.pu.A:rem: copies of the 16S rRNA genes of the P.purpurea chloroplast #:chl.P.pu.A:rem: genome" #:chl.P.pu.A:rem: misc_difference replace(351,"t") #:chl.P.pu.A:rem: /citation=[1] #:chl.P.pu.A:rem: /note="one of seven differences between the two copies of #:chl.P.pu.A:rem: the 16S rRNA genes of the P. purpurea chloroplast genome" #:chl.P.pu.A:rem: misc_difference replace(385,"g") #:chl.P.pu.A:rem: /citation=[1] #:chl.P.pu.A:rem: /note="one of seven differences between the two copies of #:chl.P.pu.A:rem: the 16S rRNA genes of the P. purpurea chloroplast genome" #:chl.P.pu.A:rem: misc_difference replace(580,"c") #:chl.P.pu.A:rem: /citation=[1] #:chl.P.pu.A:rem: /note="one of seven differences between the two copies of #:chl.P.pu.A:rem: the 16S rRNA genes of the P. purpurea chloroplast genome" #:chl.P.pu.A:rem: misc_difference replace(631,"g") #:chl.P.pu.A:rem: /citation=[1] #:chl.P.pu.A:rem: /note="one of seven differences between the two copies of #:chl.P.pu.A:rem: the 16S rRNA genes of the P. purpurea chloroplast genome" #:chl.P.pu.A:rem: misc_difference replace(655,"a") #:chl.P.pu.A:rem: /citation=[1] #:chl.P.pu.A:rem: /note="one of seven differences between the two copies of #:chl.P.pu.A:rem: the 16S rRNA genes of the P. purpurea chloroplast genome" #:chl.P.pu.A:rem: misc_difference replace(758,"c") #:chl.P.pu.A:rem: /citation=[1] #:chl.P.pu.A:rem: /note="one of seven differences between the two copies of #:chl.P.pu.A:rem: the 16S rRNA genes of the P. purpurea chloroplast genome" #:chl.P.pu.A:rem: source 1..817 #:chl.P.pu.A:rem: /organism="Porphyra purpurea" #:chl.P.pu.A:rem: /chloroplast #:chl.P.pu.A:rem:BASE COUNT 254 a 145 c 208 g 210 t #:chl.P.pu.A:rem:ORIGIN #:chl.P.pu.B:name:Chloroplast Porphyra purpurea #:chl.P.pu.B:subsp: #:chl.P.pu.B:strain: #:chl.P.pu.B:atcc: #:chl.P.pu.B:acs:L07258 #:chl.P.pu.B:auth: #:chl.P.pu.B:title: #:chl.P.pu.B:jour: #:chl.P.pu.B:who: #:chl.P.pu.B:date: #:chl.P.pu.B:rem:LOCUS PTERGB 826 bp ds-DNA PLN 26-OCT-1993 #:chl.P.pu.B:rem:DEFINITION Porphyra purpurea chloroplast 16S ribosomal RNA gene, 5' end. #:chl.P.pu.B:rem:ACCESSION L07258 #:chl.P.pu.B:rem:KEYWORDS 16S ribosomal DNA; ribosomal RNA operon; rrnB operon. #:chl.P.pu.B:rem:SOURCE Chloroplast Porphyra purpurea (organelle Chloroplast Porphyra #:chl.P.pu.B:rem: purpurea) DNA. #:chl.P.pu.B:rem: ORGANISM Chloroplast Porphyra purpurea #:chl.P.pu.B:rem: Eukaryota; Rhodophycota; Rhodophyceae; Bangiophycideae; Bangiales; #:chl.P.pu.B:rem: Bangiaceae. #:chl.P.pu.B:rem:REFERENCE 1 (bases 1 to 826) #:chl.P.pu.B:rem: AUTHORS Reith,M.E. and Munholland,J.M. #:chl.P.pu.B:rem: TITLE The Ribosomal RNA repeats are non-identical and directly oriented #:chl.P.pu.B:rem: in the chloroplast genome of the red alga, Porphyra purpurea #:chl.P.pu.B:rem: JOURNAL Unpublished (1993) #:chl.P.pu.B:rem: STANDARD full automatic #:chl.P.pu.B:rem:FEATURES Location/Qualifiers #:chl.P.pu.B:rem: promoter 79..84 #:chl.P.pu.B:rem: /citation=[1] #:chl.P.pu.B:rem: /note="putative" #:chl.P.pu.B:rem: promoter 103..108 #:chl.P.pu.B:rem: /citation=[1] #:chl.P.pu.B:rem: /note="putative" #:chl.P.pu.B:rem: repeat_region 188..>826 #:chl.P.pu.B:rem: /function="ribosomal RNA operon" #:chl.P.pu.B:rem: /rpt_type=DIRECT #:chl.P.pu.B:rem: /evidence=EXPERIMENTAL #:chl.P.pu.B:rem: /citation=[1] #:chl.P.pu.B:rem: rRNA 195..>826 #:chl.P.pu.B:rem: /product="16S ribosomal RNA" #:chl.P.pu.B:rem: /gene="16S rRNA" #:chl.P.pu.B:rem: /citation=[1] #:chl.P.pu.B:rem: /note="The two copies of the 16S rRNA genes of Porphyra #:chl.P.pu.B:rem: purpurea differ at seven positions.; putative" #:chl.P.pu.B:rem: misc_difference replace(276,"a") #:chl.P.pu.B:rem: /citation=[1] #:chl.P.pu.B:rem: /note="one of seven known differences between the two #:chl.P.pu.B:rem: copies of the 16S rRNA genes of the P. purpurea #:chl.P.pu.B:rem: chloroplast genome" #:chl.P.pu.B:rem: misc_difference replace(360,"c") #:chl.P.pu.B:rem: /citation=[1] #:chl.P.pu.B:rem: /note="one of seven differences between the two copies of #:chl.P.pu.B:rem: the 16S rRNA genes of the P. purpurea chloroplast genome" #:chl.P.pu.B:rem: misc_difference replace(394,"a") #:chl.P.pu.B:rem: /citation=[1] #:chl.P.pu.B:rem: /note="one of seven differences between the two copies of #:chl.P.pu.B:rem: the 16S rRNA genes of the P. purpurea chloroplast genome" #:chl.P.pu.B:rem: misc_difference replace(589,"t") #:chl.P.pu.B:rem: /citation=[1] #:chl.P.pu.B:rem: /note="one of seven differences between the two copies of #:chl.P.pu.B:rem: the 16S rRNA genes of the P. purpurea chloroplast genome" #:chl.P.pu.B:rem: misc_difference replace(640,"a") #:chl.P.pu.B:rem: /citation=[1] #:chl.P.pu.B:rem: /note="one of seven differences between the two copies of #:chl.P.pu.B:rem: the 16S rRNA genes of the P. purpurea chloroplast genome" #:chl.P.pu.B:rem: misc_difference replace(664,"g") #:chl.P.pu.B:rem: /citation=[1] #:chl.P.pu.B:rem: /note="one of seven differences between the two copies of #:chl.P.pu.B:rem: the 16S rRNA genes of the P. purpurea chloroplast genome" #:chl.P.pu.B:rem: misc_difference replace(767,"t") #:chl.P.pu.B:rem: /citation=[1] #:chl.P.pu.B:rem: /note="one of seven differences between the two copies of #:chl.P.pu.B:rem: the 16S rRNA genes of the P. purpurea chloroplast genome" #:chl.P.pu.B:rem: source 1..826 #:chl.P.pu.B:rem: /organism="Porphyra purpurea" #:chl.P.pu.B:rem: /chloroplast #:chl.P.pu.B:rem:BASE COUNT 262 a 144 c 205 g 215 t #:chl.P.pu.B:rem:ORIGIN #:chl.C.cald:name:Cyanidium caldarium #:chl.C.cald:subsp: #:chl.C.cald:strain: #:chl.C.cald:atcc: #:chl.C.cald:acs:X52985 #:chl.C.cald:auth: #:chl.C.cald:title: #:chl.C.cald:jour: #:chl.C.cald:who: #:chl.C.cald:date: #:chl.C.cald:rem:ID CHCC16S standard; DNA; PLN; 1492 BP. #:chl.C.cald:rem:XX #:chl.C.cald:rem:AC X52985; #:chl.C.cald:rem:XX #:chl.C.cald:rem:DT 16-JUL-1990 (annotation) #:chl.C.cald:rem:XX #:chl.C.cald:rem:DE C. caldarium plastid gene for 16S rRNA #:chl.C.cald:rem:XX #:chl.C.cald:rem:KW 16S ribosomal RNA; ribosomal RNA. #:chl.C.cald:rem:XX #:chl.C.cald:rem:OS Cyanidium caldarium #:chl.C.cald:rem:OC Eukaryota; Planta; Phycophyta. #:chl.C.cald:rem:XX #:chl.C.cald:rem:RN [1] (bases 1-1492) #:chl.C.cald:rem:RA Maid U.; #:chl.C.cald:rem:RT ; #:chl.C.cald:rem:RL Submitted (08-MAY-1990) on tape to the EMBL Data Library by: #:chl.C.cald:rem:RL Maid U., Institut fuer Pflanzenphysiologie, Heinrich-Buff-Ring 58, #:chl.C.cald:rem:RL D-6300 Giessen, FRG. #:chl.C.cald:rem:XX #:chl.C.cald:rem:RN [2] (bases 1-1492) #:chl.C.cald:rem:RA Maid U., Zetsche K.; #:chl.C.cald:rem:RT "Nucleotide sequence of the plastid 16S rRNA of the red alga #:chl.C.cald:rem:RT Cyanidium caldarium"; #:chl.C.cald:rem:RL Nucleic Acids Res. 18:3996-3996(1990). #:chl.C.cald:rem:XX #:chl.C.cald:rem:CC *source: strain=14-1-1; #:chl.C.cald:rem:XX #:chl.C.cald:rem:FH Key From To Description #:chl.C.cald:rem:FH #:chl.C.cald:rem:FT RRNA 1 1492 16S rRNA #:chl.C.cald:rem:XX #:chl.C.cald:rem:SQ Sequence 1492 BP; 420 A; 300 C; 422 G; 350 T; 0 other; #:Chl.Cya.ca:name:Chloroplast Cyanidium caldarium. #:Chl.Cya.ca:subsp: #:Chl.Cya.ca:strain: #:Chl.Cya.ca:atcc: #:Chl.Cya.ca:acs:AF022186 #:Chl.Cya.ca:auth:Gloeckner,G., Rosenthal,A. and Valentin,K. #:Chl.Cya.ca:title:Organisation of 46 kb of the Cyanidium caldarium RK1 plastid #:Chl.Cya.ca:jour:Unpublished #:Chl.Cya.ca:who: #:Chl.Cya.ca:date:07-OCT-1997 #:Chl.Cya.ca:title:genome #:Chl.Cya.ca:rem:ref:1 (bases 1 to 46880) #:Chl.Cya.ca:rem:ref:2 (bases 1 to 46880) #:Chl.Cya.ca:rem:auth:Gloeckner,G., Rosenthal,A. and Valentin,K. #:Chl.Cya.ca:rem:jour:Submitted (02-SEP-1997) Department of genome analysis, #:Chl.Cya.ca:rem:: IMB Jena, Beutenbergstr. 11, Jena 07745, Germany #:Chl.Cya.ca:rem:title:Direct Submission #:Chl.Cya.ca:rem:KEYWORDS:. #:Chl.Cya.ca:rem:GenBank ACCESSION:AF022186 #:chl.Ant.sp:name:Antithamnion sp #:chl.Ant.sp:subsp: #:chl.Ant.sp:strain: #:chl.Ant.sp:atcc: #:chl.Ant.sp:acs:X54299 #:chl.Ant.sp:auth: #:chl.Ant.sp:title: #:chl.Ant.sp:jour: #:chl.Ant.sp:who: #:chl.Ant.sp:date: #:chl.Ant.sp:rem:LOCUS ANTCPASSPA 2099 bp ds-DNA ORG 31-JUL-1991 #:chl.Ant.sp:rem:DEFINITION Antithamnion sp. plastid DNA for 16S rRNA/23S rRNA spacer region #:chl.Ant.sp:rem: and tRNA-Ile and tRNA-Ala genes #:chl.Ant.sp:rem:ACCESSION X54299 #:chl.Ant.sp:rem:KEYWORDS 16S ribosomal RNA; 23S ribosomal RNA; intergenic spacer; #:chl.Ant.sp:rem: spacer DNA; transfer RNA; transfer RNA-Ala; transfer RNA-Ile. #:chl.Ant.sp:rem:SOURCE Chloroplast Antithamnion sp. DNA. #:chl.Ant.sp:rem: ORGANISM Chloroplast Antithamnion sp. #:chl.Ant.sp:rem: Eukaryota; Fungi; Rhodophycota; Rhodophyceae; Bangiophycideae; #:chl.Ant.sp:rem: Bangiales; Bangiaceae. #:chl.Ant.sp:rem:REFERENCE 1 (bases 1 to 2099; 1739 to 2042) #:chl.Ant.sp:rem: AUTHORS Maid,U. and Zetsche,K. #:chl.Ant.sp:rem: TITLE Structural features of the plastid ribosomal RNA operons of two red #:chl.Ant.sp:rem: algae:Antithamnion sp. and Cyanidium caldarium #:chl.Ant.sp:rem: JOURNAL Plant Mol. Biol. 16, 537-546 (1991) #:chl.Ant.sp:rem: STANDARD full automatic #:chl.Ant.sp:rem:COMMENT See also X54300 #:chl.Ant.sp:rem: From EMBL entry CHASSPAC; dated 03-JUL-1991. #:chl.Ant.sp:rem:FEATURES Location/Qualifiers #:chl.Ant.sp:rem: rRNA 254..1739 #:chl.Ant.sp:rem: /product="16S ribosomal RNA" #:chl.Ant.sp:rem: /gene="16S rRNA" #:chl.Ant.sp:rem: misc_feature 1740..1793 #:chl.Ant.sp:rem: /note="spacer region I" #:chl.Ant.sp:rem: tRNA 1794..1867 #:chl.Ant.sp:rem: /product="transfer RNA-Ile" #:chl.Ant.sp:rem: /gene="tRNA-Ile" #:chl.Ant.sp:rem: misc_feature 1868..1874 #:chl.Ant.sp:rem: /note="spacer region II" #:chl.Ant.sp:rem: tRNA 1875..1947 #:chl.Ant.sp:rem: /product="transfer RNA-Ala" #:chl.Ant.sp:rem: /gene="tRNA-Ala" #:chl.Ant.sp:rem: misc_feature 1948..2043 #:chl.Ant.sp:rem: /note="spacer region III" #:chl.Ant.sp:rem: rRNA 2044..>2099 #:chl.Ant.sp:rem: /product="23S ribosomal RNA" #:chl.Ant.sp:rem: /gene="23S rRNA" #:chl.Ant.sp:rem:BASE COUNT 617 a 379 c 519 g 584 t #:chl.Ant.sp:rem:ORIGIN #:chl.C.cris:name:Chloroplast Chondrus crispus #:chl.C.cris:subsp: #:chl.C.cris:strain: #:chl.C.cris:atcc: #:chl.C.cris:acs:Z29521 #:chl.C.cris:auth: #:chl.C.cris:title: #:chl.C.cris:jour: #:chl.C.cris:who: #:chl.C.cris:date: #:chl.C.cris:rem:LOCUS CHCC16SRR 2052 bp DNA PLN 15-DEC-1994 #:chl.C.cris:rem:DEFINITION C.crispus Chloroplast gene encoding 16S rRNA, tRNA-Ile, tRNA-Ala, #:chl.C.cris:rem: and 23S rRNA (partial). #:chl.C.cris:rem:ACCESSION Z29521 #:chl.C.cris:rem:KEYWORDS 16S ribosomal RNA; 23S ribosomal RNA; transfer RNA-Ala; #:chl.C.cris:rem: transfer RNA-Ile. #:chl.C.cris:rem:SOURCE carragheen. #:chl.C.cris:rem: ORGANISM Chloroplast Chondrus crispus #:chl.C.cris:rem: Eukaryota; Plantae; Thallobionta; Rhodophyta; Rhodophyceae; #:chl.C.cris:rem: Florideophycideae; Gigartinales; Gigartinaceae. #:chl.C.cris:rem:REFERENCE 1 (bases 1 to 2052) #:chl.C.cris:rem: AUTHORS Leblanc,C., Boyen,C. and Loiseaux-de Goer,S. #:chl.C.cris:rem: TITLE Sequence and phylogeny of the plastidial 16s rRNA gene from the #:chl.C.cris:rem: red alga Chondrus crispus #:chl.C.cris:rem: JOURNAL Unpublished #:chl.C.cris:rem: STANDARD full automatic #:chl.C.cris:rem:REFERENCE 2 (bases 1 to 2052) #:chl.C.cris:rem: AUTHORS Leblanc,C. #:chl.C.cris:rem: TITLE Direct Submission #:chl.C.cris:rem: JOURNAL Submitted (19-JAN-1994) to the EMBL/GenBank/DDBJ databases. #:chl.C.cris:rem: Catherine Leblanc, CNRS Centre d'etudes d'oceanologie et de #:chl.C.cris:rem: biologie marine, Place Georges Teissier, ROSCOFF, 29 682 CEDEX, #:chl.C.cris:rem: FRANCE #:chl.C.cris:rem: STANDARD full automatic #:chl.C.cris:rem:COMMENT #:chl.C.cris:rem: NCBI gi: 602525 #:chl.C.cris:rem:FEATURES Location/Qualifiers #:chl.C.cris:rem: source 1..2052 #:chl.C.cris:rem: /organism="Chondrus crispus" #:chl.C.cris:rem: /chloroplast #:chl.C.cris:rem: /tissue_type="APICES" #:chl.C.cris:rem: /cell_type="PROTOPLAST" #:chl.C.cris:rem: -35_signal 22..27 #:chl.C.cris:rem: -10_signal 46..51 #:chl.C.cris:rem: rRNA 135..1625 #:chl.C.cris:rem: /gene="16S rRNA" #:chl.C.cris:rem: /product="16S ribosomal RNA" #:chl.C.cris:rem: tRNA 1689..1762 #:chl.C.cris:rem: /gene="tRNA-Ile" #:chl.C.cris:rem: /note="gat anticodon" #:chl.C.cris:rem: /product="transfer RNA-Ile" #:chl.C.cris:rem: tRNA 1776..1848 #:chl.C.cris:rem: /gene="tRNA-Ala" #:chl.C.cris:rem: /note="tgc anticodon" #:chl.C.cris:rem: /product="transfer RNA-Ala" #:chl.C.cris:rem: rRNA 1902..>2052 #:chl.C.cris:rem: /gene="23S rRNA" #:chl.C.cris:rem: /product="23S ribosomal RNA" #:chl.C.cris:rem:BASE COUNT 606 a 397 c 539 g 510 t #:chl.C.cris:rem:ORIGIN #:chl.P.palm:name:Palmaria palmata #:chl.P.palm:subsp: #:chl.P.palm:strain: #:chl.P.palm:atcc: #:chl.P.palm:acs:Z18289 #:chl.P.palm:auth: #:chl.P.palm:title: #:chl.P.palm:jour: #:chl.P.palm:who: #:chl.P.palm:date: #:chl.P.palm:rem:ID PPC16SRNA standard; RNA; PLN; 4870 BP. #:chl.P.palm:rem:XX #:chl.P.palm:rem:AC Z18289; #:chl.P.palm:rem:XX #:chl.P.palm:rem:DT 18-JAN-1993 (Rel. 34, Created) #:chl.P.palm:rem:DT 18-JAN-1993 (Rel. 34, Last updated, Version 2) #:chl.P.palm:rem:XX #:chl.P.palm:rem:DE Palmaria palmata Chloroplast for 16SrRNA gene. #:chl.P.palm:rem:XX #:chl.P.palm:rem:KW 16S ribosomal RNA. #:chl.P.palm:rem:XX #:chl.P.palm:rem:OS Palmaria palmata #:chl.P.palm:rem:OC Eukaryota; Plantae; Thallobionta; Rhodophyta; Rhodophyceae; #:chl.P.palm:rem:OC Florideophycideae; Palmariales; Palmariaceae. #:chl.P.palm:rem:XX #:chl.P.palm:rem:RN [1] #:chl.P.palm:rem:RP 1-4870 #:chl.P.palm:rem:RA Singh R.K.; #:chl.P.palm:rem:RT "The Organization and Primary Structure of the Plastid rRNA Operon #:chl.P.palm:rem:RT from the Red Alga Palmaria palmata"; #:chl.P.palm:rem:RL Unpublished. #:chl.P.palm:rem:XX #:chl.P.palm:rem:RN [2] #:chl.P.palm:rem:RP 1-4870 #:chl.P.palm:rem:RA Singh R.K.; #:chl.P.palm:rem:RT ; #:chl.P.palm:rem:RL Submitted (09-NOV-1992) on tape to the EMBL Data Library by: #:chl.P.palm:rem:RL RAMA K SINGH Ph.D., MARINE BIOSCIENCES, INSTITUTE FOR MARINE #:chl.P.palm:rem:RL BIOSCIENCES, NATIONAL RESEARCH COUNCIL, 1411 OXFORD STREET, #:chl.P.palm:rem:RL HALIFAX, NOVA SCOTIA, B3H 3Z1, CANADA #:chl.P.palm:rem:XX #:chl.P.palm:rem:CC *source: haplotype=haploid; #:chl.P.palm:rem:CC *source: tissue=thallus; #:chl.P.palm:rem:CC *source: is_germline=N; #:chl.P.palm:rem:XX #:chl.P.palm:rem:FH Key Location/Qualifiers #:chl.P.palm:rem:FH #:chl.P.palm:rem:FT rRNA 1..1486 #:chl.P.palm:rem:FT /gene="16SrRNA" #:chl.P.palm:rem:FT tRNA 1545..1618 #:chl.P.palm:rem:FT /gene="tRNAIle" #:chl.P.palm:rem:FT tRNA 1624..1696 #:chl.P.palm:rem:FT /gene="tRNAAla" #:chl.P.palm:rem:FT rRNA 1743..4627 #:chl.P.palm:rem:FT /gene="23SrRNA" #:chl.P.palm:rem:FT rRNA 4651..4771 #:chl.P.palm:rem:FT /gene="5SrRNA" #:chl.P.palm:rem:XX SQ Sequence 4870 BP; 1419 A; 1003 C; 1343 G; 1105 T; 0 other; #:(3)-Viridi:name: #:(3)-Viridi:subsp: #:(3)-Viridi:strain: #:(3)-Viridi:atcc: #:(3)-Viridi:acs:DIVIDER #:(3)-Viridi:auth: #:(3)-Viridi:title: #:(3)-Viridi:jour: #:(3)-Viridi:who:DAMBERGER, SIMON HEL,Porter B256,, #:(3)-Viridi:date:Thu Nov 17 08:53:47 1994 #:(4)-Chloro:name: #:(4)-Chloro:subsp: #:(4)-Chloro:strain: #:(4)-Chloro:atcc: #:(4)-Chloro:acs:DIVIDER #:(4)-Chloro:auth: #:(4)-Chloro:title: #:(4)-Chloro:jour: #:(4)-Chloro:who:DAMBERGER, SIMON HEL,Porter B256,, #:(4)-Chloro:date:Thu Nov 17 08:53:47 1994 #:chl.C.elli:name:chloroplast:Chlorella ellipsoidea #:chl.C.elli:subsp: #:chl.C.elli:strain: #:chl.C.elli:atcc: #:chl.C.elli:acs:X12742 #:chl.C.elli:auth: #:chl.C.elli:title: #:chl.C.elli:jour:published:Yamada, NAR 16:9865(1988) #:chl.C.elli:who:Robin Gutell #:chl.C.elli:date:Fri Nov 18 16:35:10 1988 #:chl.C.mira:name:Chlorella mirabilis #:chl.C.mira:subsp: #:chl.C.mira:strain: #:chl.C.mira:atcc: #:chl.C.mira:acs:X65100 #:chl.C.mira:auth: #:chl.C.mira:title: #:chl.C.mira:jour: #:chl.C.mira:who: #:chl.C.mira:date: #:chl.C.mira:rem:LOCUS CHLCPSSRRO 1629 bp ds-DNA ORG 23-JUN-1992 #:chl.C.mira:rem:DEFINITION C.mirabilis plastid DNA for 16S-like rRNA small subunit #:chl.C.mira:rem:ACCESSION X65100 #:chl.C.mira:rem:KEYWORDS small subunit ribosomal RNA. #:chl.C.mira:rem:SOURCE Chloroplast Chlorella mirabilis DNA. #:chl.C.mira:rem: ORGANISM Chloroplast Chlorella mirabilis #:chl.C.mira:rem: Eukaryota; Chlorophycota; Chlorophyceae; Chlorococcales; #:chl.C.mira:rem: Oocystaceae. #:chl.C.mira:rem:REFERENCE 1 (bases 1 to 1629) #:chl.C.mira:rem: AUTHORS Huss,V.A., Hirsh,E. and Giovannoni,S.J. #:chl.C.mira:rem: JOURNAL Unpublished (1992) #:chl.C.mira:rem: STANDARD full automatic #:chl.C.mira:rem:COMMENT *source: strain=748-I (type strain); #:chl.C.mira:rem: From EMBL entry CMSSRRNA; dated 01-APR-1992. #:chl.C.mira:rem:FEATURES Location/Qualifiers #:chl.C.mira:rem: misc_feature 1..30 #:chl.C.mira:rem: /note="PCR amplification primer" #:chl.C.mira:rem: rRNA 1..1629 #:chl.C.mira:rem: /product="small subunit rRNA" #:chl.C.mira:rem: misc_feature 1606..1629 #:chl.C.mira:rem: /note="PCR amplification primer" #:chl.C.mira:rem:BASE COUNT 431 a 348 c 476 g 368 t 6 others #:chl.C.mira:rem:ORIGIN #:chl.C.prot:name:Chlorella protothecoide #:chl.C.prot:subsp: #:chl.C.prot:strain: #:chl.C.prot:atcc: #:chl.C.prot:acs:X65688 #:chl.C.prot:auth: #:chl.C.prot:title: #:chl.C.prot:jour: #:chl.C.prot:who: #:chl.C.prot:date: #:chl.C.prot:rem:ID CPSSRRNA standard; RNA; ORG; 1541 BP. #:chl.C.prot:rem:XX #:chl.C.prot:rem:AC X65688; #:chl.C.prot:rem:XX #:chl.C.prot:rem:DT 25-MAY-1992 (Rel. 31, Created) #:chl.C.prot:rem:DT 04-JUN-1992 (Rel. 32, Last updated, Version 7) #:chl.C.prot:rem:XX #:chl.C.prot:rem:DE C.protothecoides plastid DNA for small subunit (16S-like) ribosomal #:chl.C.prot:rem:DE RNA #:chl.C.prot:rem:XX #:chl.C.prot:rem:KW ribosomal RNA; small subunit ribosomal RNA. #:chl.C.prot:rem:XX #:chl.C.prot:rem:OS Chlorella protothecoides #:chl.C.prot:rem:OC Eukaryota; Plantae; Thallobionta; Chlorophycota; Chlorophyceae; #:chl.C.prot:rem:OC Chlorococcales; Oocystaceae. #:chl.C.prot:rem:XX #:chl.C.prot:rem:OG Plastid #:chl.C.prot:rem:XX #:chl.C.prot:rem:RN [1] #:chl.C.prot:rem:RP 1-1541 #:chl.C.prot:rem:RA Huss V.A.R.; #:chl.C.prot:rem:RT ; #:chl.C.prot:rem:RL Submitted (24-APR-1992) on tape to the EMBL Data Library by: #:chl.C.prot:rem:RL V.A.R. Huss, Institut fuer Botanik und Pharmazeutische Biologie, #:chl.C.prot:rem:RL Universitaet Erlangen, Staudtstr 5, W 8520 Erlangen, FRG #:chl.C.prot:rem:XX #:chl.C.prot:rem:RN [2] #:chl.C.prot:rem:RP 1-1541 #:chl.C.prot:rem:RA Huss V.A.R., Hatzack F., Fox G.E.; #:chl.C.prot:rem:RT ; #:chl.C.prot:rem:RL Unpublished. #:chl.C.prot:rem:XX #:chl.C.prot:rem:CC *source: strain=211-7a (Type strain); #:chl.C.prot:rem:XX #:chl.C.prot:rem:FH Key Location/Qualifiers #:chl.C.prot:rem:FH #:chl.C.prot:rem:FT misc_feature 1..30 #:chl.C.prot:rem:FT /note="PCR amplification primer" #:chl.C.prot:rem:FT rRNA 1..1541 #:chl.C.prot:rem:FT /product="small subunit rRNA" #:chl.C.prot:rem:FT misc_feature 1518..1541 #:chl.C.prot:rem:FT /note="PCR amplification primer" #:chl.C.prot:rem:XX #:chl.C.prot:rem:SQ Sequence 1541 BP; 438 A; 313 C; 433 G; 353 T; 4 other; #:chl.C.sa.1:name:Chlorella saccharophila #:chl.C.sa.1:subsp: #:chl.C.sa.1:strain: #:chl.C.sa.1:atcc: #:chl.C.sa.1:acs:D11349 #:chl.C.sa.1:auth: #:chl.C.sa.1:title: #:chl.C.sa.1:jour: #:chl.C.sa.1:who: #:chl.C.sa.1:date: #:chl.C.sa.1:rem:LOCUS CHLCPSA16S 1502 bp ss-rRNA RNA 04-SEP-1994 #:chl.C.sa.1:rem:DEFINITION Chlorella saccharophila chloroplast 16S ribosomal RNA. #:chl.C.sa.1:rem:ACCESSION D11349 #:chl.C.sa.1:rem:KEYWORDS chloroplast 16S ribosomal RNA; protein synthesis. #:chl.C.sa.1:rem:SOURCE Chlorella saccharophila (strain Chlorella saccharophila) rRNA. #:chl.C.sa.1:rem: ORGANISM Chlorella saccharophila #:chl.C.sa.1:rem: Eukaryota; Chlorophycota; Chlorophyceae; Chlorococcales; #:chl.C.sa.1:rem: Oocystaceae. #:chl.C.sa.1:rem:REFERENCE 1 (bases 1 to 1502) #:chl.C.sa.1:rem: AUTHORS Oyaizu,H., Matsumoto,S. and Takeda,H. #:chl.C.sa.1:rem: TITLE Polyphyletic origins of chlorophyte chloroplasts #:chl.C.sa.1:rem: JOURNAL Unpublished (1992) #:chl.C.sa.1:rem: STANDARD full automatic #:chl.C.sa.1:rem:COMMENT #:chl.C.sa.1:rem: These data kindly submitted in computer readable form by: Hiroshi #:chl.C.sa.1:rem: Oyaizu #:chl.C.sa.1:rem: Faculty of Agriculture #:chl.C.sa.1:rem: The University of Tokyo #:chl.C.sa.1:rem: Bunkyo-ku, Tokyo 183 #:chl.C.sa.1:rem: Japan #:chl.C.sa.1:rem: Phone: 03-3812-2111 x5240 #:chl.C.sa.1:rem: Fax: 03-3812-0544. #:chl.C.sa.1:rem: NCBI gi: 534863 #:chl.C.sa.1:rem:FEATURES Location/Qualifiers #:chl.C.sa.1:rem: source 1..1502 #:chl.C.sa.1:rem: /organism="Chlorella saccharophila" #:chl.C.sa.1:rem: /strain="Chlorella saccharophila" #:chl.C.sa.1:rem: /sequenced_mol="rRNA" #:chl.C.sa.1:rem:BASE COUNT 417 a 306 c 432 g 347 t #:chl.C.sa.1:rem:ORIGIN #:chl.C.sa.2:name:Chlorella saccharophila #:chl.C.sa.2:subsp: #:chl.C.sa.2:strain: #:chl.C.sa.2:atcc: #:chl.C.sa.2:acs:D11348 #:chl.C.sa.2:auth: #:chl.C.sa.2:title: #:chl.C.sa.2:jour: #:chl.C.sa.2:who: #:chl.C.sa.2:date: #:chl.C.sa.2:rem:LOCUS CHLCPS16S 1636 bp ss-rRNA RNA 04-SEP-1994 #:chl.C.sa.2:rem:DEFINITION Chlorella saccharophila chloroplast 16S ribosomal RNA. #:chl.C.sa.2:rem:ACCESSION D11348 #:chl.C.sa.2:rem:KEYWORDS chloroplast 16S ribosomal RNA; protein synthesis. #:chl.C.sa.2:rem:SOURCE Chlorella saccharophila (strain Chlorella saccharophila) rRNA. #:chl.C.sa.2:rem: ORGANISM Chlorella saccharophila #:chl.C.sa.2:rem: Eukaryota; Chlorophycota; Chlorophyceae; Chlorococcales; #:chl.C.sa.2:rem: Oocystaceae. #:chl.C.sa.2:rem:REFERENCE 1 (bases 1 to 1636) #:chl.C.sa.2:rem: AUTHORS Oyaizu,H., Matsumoto,S. and Takeda,H. #:chl.C.sa.2:rem: TITLE Polyphyletic origins of chlorophyte chloroplasts #:chl.C.sa.2:rem: JOURNAL Unpublished (1992) #:chl.C.sa.2:rem: STANDARD full automatic #:chl.C.sa.2:rem:COMMENT #:chl.C.sa.2:rem: These data kindly submitted in computer readable form by: Hiroshi #:chl.C.sa.2:rem: Oyaizu #:chl.C.sa.2:rem: Faculty of Agriculture #:chl.C.sa.2:rem: The University of Tokyo #:chl.C.sa.2:rem: Bunkyo-ku, Tokyo 183 #:chl.C.sa.2:rem: Japan #:chl.C.sa.2:rem: Phone: 03-3812-2111 x5240 #:chl.C.sa.2:rem: Fax: 03-3812-0544. #:chl.C.sa.2:rem: NCBI gi: 534862 #:chl.C.sa.2:rem:FEATURES Location/Qualifiers #:chl.C.sa.2:rem: source 1..1636 #:chl.C.sa.2:rem: /organism="Chlorella saccharophila" #:chl.C.sa.2:rem: /strain="Chlorella saccharophila" #:chl.C.sa.2:rem: /sequenced_mol="rRNA" #:chl.C.sa.2:rem:BASE COUNT 445 a 351 c 468 g 372 t #:chl.C.sa.2:rem:ORIGIN #:chl.C.soro:name:Chlorella sorokiniana #:chl.C.soro:subsp: #:chl.C.soro:strain: #:chl.C.soro:atcc: #:chl.C.soro:acs:X65689 #:chl.C.soro:auth: #:chl.C.soro:title: #:chl.C.soro:jour: #:chl.C.soro:who: #:chl.C.soro:date: #:chl.C.soro:rem: ID CSSSRRNAX standard; RNA; ORG; 1493 BP. #:chl.C.soro:rem: XX #:chl.C.soro:rem: AC X65689; #:chl.C.soro:rem: XX #:chl.C.soro:rem: DT 25-MAY-1992 (Rel. 31, Created) #:chl.C.soro:rem: DT 04-JUN-1992 (Rel. 32, Last updated, Version 7) #:chl.C.soro:rem: XX #:chl.C.soro:rem: DE C.sorokiniana plastid DNA small subunit (16S-like) ribosomal RNA #:chl.C.soro:rem: XX #:chl.C.soro:rem: KW ribosomal RNA; small subunit ribosomal RNA. #:chl.C.soro:rem: XX #:chl.C.soro:rem: OS Chlorella sorokiniana #:chl.C.soro:rem: OC Eukaryota; Plantae; Thallobionta; Chlorophycota; Chlorophyceae; #:chl.C.soro:rem: OC Chlorococcales; Oocystaceae. #:chl.C.soro:rem: XX #:chl.C.soro:rem: OG Plastid #:chl.C.soro:rem: XX #:chl.C.soro:rem: RN [1] #:chl.C.soro:rem: RP 1-1493 #:chl.C.soro:rem: RA Huss V.A.R.; #:chl.C.soro:rem: RT ; #:chl.C.soro:rem: RL Submitted (24-APR-1992) on tape to the EMBL Data Library by: #:chl.C.soro:rem: RL V.A.R. Huss, Institut fuer Botanik und Pharmazeutische Biologie, #:chl.C.soro:rem: RL Universitaet Erlangen, Staudtstr 5, W 8520 Erlangen, FRG #:chl.C.soro:rem: XX #:chl.C.soro:rem: RN [2] #:chl.C.soro:rem: RP 1-1493 #:chl.C.soro:rem: RA Huss V.A.R., Hatzack F., Fox G.E.; #:chl.C.soro:rem: RT ; #:chl.C.soro:rem: RL Unpublished. #:chl.C.soro:rem: XX #:chl.C.soro:rem: CC *source: strain=211-8k (Type strain); #:chl.C.soro:rem: XX #:chl.C.soro:rem: FH Key Location/Qualifiers #:chl.C.soro:rem: FH #:chl.C.soro:rem: FT misc_feature 1..30 #:chl.C.soro:rem: FT /note="PCR amplification primer" #:chl.C.soro:rem: FT rRNA 1..1493 #:chl.C.soro:rem: FT /product="small subunit rRNA" #:chl.C.soro:rem: FT misc_feature 1470..1493 #:chl.C.soro:rem: FT /note="PCR amplification primer" #:chl.C.soro:rem: XX #:chl.C.soro:rem: SQ Sequence 1493 BP; 391 A; 328 C; 461 G; 308 T; 5 other; #:chl.C.vu.1:name:Chlorella vulgaris #:chl.C.vu.1:subsp: #:chl.C.vu.1:strain: #:chl.C.vu.1:atcc: #:chl.C.vu.1:acs:X16579 #:chl.C.vu.1:auth: #:chl.C.vu.1:title: #:chl.C.vu.1:jour: #:chl.C.vu.1:who: #:chl.C.vu.1:date: #:chl.C.vu.1:rem:X16579 #:chl.C.vu.1:rem:Nucleic Acids Research 17.9487 1989 #:chl.C.vu.2:name:Chlorella vulgaris #:chl.C.vu.2:subsp: #:chl.C.vu.2:strain: #:chl.C.vu.2:atcc: #:chl.C.vu.2:acs:D11347 #:chl.C.vu.2:auth: #:chl.C.vu.2:title: #:chl.C.vu.2:jour: #:chl.C.vu.2:who: #:chl.C.vu.2:date: #:chl.C.vu.2:rem:LOCUS CHLCPV16S 1450 bp ss-rRNA RNA 04-SEP-1994 #:chl.C.vu.2:rem:DEFINITION Chlorella vulgaris chloroplast 16S ribosomal RNA. #:chl.C.vu.2:rem:ACCESSION D11347 #:chl.C.vu.2:rem:KEYWORDS Chloroplast 16S ribosomal RNA; protein synthesis. #:chl.C.vu.2:rem:SOURCE Chlorella vulgaris (strain Chlorella vulgaris) rRNA. #:chl.C.vu.2:rem: ORGANISM Chlorella vulgaris #:chl.C.vu.2:rem: Eukaryota; Chlorophycota; Chlorophyceae; Chlorococcales; #:chl.C.vu.2:rem: Oocystaceae. #:chl.C.vu.2:rem:REFERENCE 1 (bases 1 to 1450) #:chl.C.vu.2:rem: AUTHORS Oyaizu,H., Matsumoto,S. and Takeda,H. #:chl.C.vu.2:rem: TITLE Polyphyletic origins of chlorophyte chloroplasts #:chl.C.vu.2:rem: JOURNAL Unpublished (1992) #:chl.C.vu.2:rem: STANDARD full automatic #:chl.C.vu.2:rem:COMMENT #:chl.C.vu.2:rem: These data kindly submitted in computer readable form by: Hiroshi #:chl.C.vu.2:rem: Oyaizu #:chl.C.vu.2:rem: Faculty of Agriculture #:chl.C.vu.2:rem: The University of Tokyo #:chl.C.vu.2:rem: Bunkyo-ku, Tokyo 183 #:chl.C.vu.2:rem: Japan #:chl.C.vu.2:rem: Phone: 03-3812-2111 x5240 #:chl.C.vu.2:rem: Fax: 03-3812-0544. #:chl.C.vu.2:rem: NCBI gi: 534864 #:chl.C.vu.2:rem:FEATURES Location/Qualifiers #:chl.C.vu.2:rem: source 1..1450 #:chl.C.vu.2:rem: /organism="Chlorella vulgaris" #:chl.C.vu.2:rem: /strain="Chlorella vulgaris" #:chl.C.vu.2:rem: /sequenced_mol="rRNA" #:chl.C.vu.2:rem:BASE COUNT 389 a 320 c 444 g 297 t #:chl.C.vu.2:rem:ORIGIN #:chl.C.vu.3:name:Chloroplast Chlorella vulgaris C-27. #:chl.C.vu.3:subsp: #:chl.C.vu.3:strain: #:chl.C.vu.3:atcc: #:chl.C.vu.3:acs:AB001684 #:chl.C.vu.3:auth:Sugiura,M. #:chl.C.vu.3:title:Direct Submission #:chl.C.vu.3:jour:Fax:+81-52-789-3081) #:chl.C.vu.3:who: #:chl.C.vu.3:date:26-JUN-1997 #:chl.C.vu.3:jour:Submitted (08-MAR-1997) to the DDBJ/EMBL/GenBank databases. #:chl.C.vu.3:jour:Masahiro Sugiura, Nagoya University, Center for Gene Research; #:chl.C.vu.3:jour:Chikusa-ku, Nagoya, Aichi 464-01, Japan (Tel:+81-52-789-3080, #:chl.C.vu.3:rem:ref:1 (bases 1 to 150613) #:chl.C.vu.3:rem:ref:2 (sites) #:chl.C.vu.3:rem:auth:Wakasugi,T., Nagai,T., Kapoor,M., Sugita,M., Ito,M., Ito, #:chl.C.vu.3:rem:: S., Tsudzuki,J., Nakashima,K., Tsudzuki,T., Suzuki,Y., #:chl.C.vu.3:rem:: Hamada,A., Ohta,T., Inamura,A., Yoshinaga,K. and Sugiura,M. #:chl.C.vu.3:rem:jour:Unpublished (1997) #:chl.C.vu.3:rem:title:Complete sequence of the green alga Chlorella vulgaris #:chl.C.vu.3:rem:: chloroplast genome reveals the existence of genes possibly #:chl.C.vu.3:rem:: involved in chloroplast division. (tentative) #:chl.C.vu.3:rem:ref:3 (sites) #:chl.C.vu.3:rem:auth:Wakasugi,T., Nagai,T., Kapoor,M., Sugita,M., Ito,M., Ito, #:chl.C.vu.3:rem:: S., Tsudzuki,J., Nakashima,K., Tsudzuki,T., Suzuki,Y., #:chl.C.vu.3:rem:: Hamada,A., Ohta,T., Inamura,A., Yoshinaga,K. and Sugiura,M. #:chl.C.vu.3:rem:jour:Proc. Natl. Acad. Sci. U.S.A. 94 (11), 5967-5972 (1997) #:chl.C.vu.3:rem:title:Complete nucleotide sequence of the chloroplast genome #:chl.C.vu.3:rem:: from the green alga Chlorella vulgaris: the existence of #:chl.C.vu.3:rem:: genes possibly involved in chloroplast division #:chl.C.vu.3:rem:KEYWORDS:. #:chl.C.vu.3:rem:GenBank ACCESSION:AB0016 4 #:chl.N.euca:name:Nanochlorum eucaryotum #:chl.N.euca:subsp: #:chl.N.euca:strain: #:chl.N.euca:atcc: #:chl.N.euca:acs:X76084 #:chl.N.euca:auth: #:chl.N.euca:title: #:chl.N.euca:jour: #:chl.N.euca:who: #:chl.N.euca:date: #:chl.N.euca:name:Nanochlorum eucaryotum #:chl.N.euca:subsp: #:chl.N.euca:strain: #:chl.N.euca:atcc: #:chl.N.euca:acs:X76084 #:chl.N.euca:auth: #:chl.N.euca:title: #:chl.N.euca:jour: #:chl.N.euca:who: #:chl.N.euca:date: #:chl.N.euca:rem:LOCUS CHNERRNA 5431 bp DNA PLN 24-NOV-1993 #:chl.N.euca:rem:DEFINITION N.eucaryotum chloroplast 16S rRNA, tRNA-Ile, tRNA-Ala and 23S rRNA #:chl.N.euca:rem: genes. #:chl.N.euca:rem:ACCESSION X76084 #:chl.N.euca:rem:KEYWORDS 16S ribosomal RNA; 23S ribosomal RNA; tRNA-Ala; tRNA-Ile. #:chl.N.euca:rem:SOURCE Nanochlorum eucaryotum #:chl.N.euca:rem: ORGANISM Chloroplast Nanochlorum eucaryotum #:chl.N.euca:rem: Eukaryota; Plantae; Thallobionta; Chlorophyta; Chlorophyceae. #:chl.N.euca:rem:REFERENCE 1 (bases 1 to 5431) #:chl.N.euca:rem: AUTHORS Weinblum,D. #:chl.N.euca:rem: TITLE Direct Submission #:chl.N.euca:rem: JOURNAL Submitted (10-NOV-1993) to the EMBL/GenBank/DDBJ databases. D. #:chl.N.euca:rem: Weinblum, Inst. fuer Physiologiche Chemie, Univ. Mainz, Duesbergweg #:chl.N.euca:rem: 6, 55099 Mainz, FRG #:chl.N.euca:rem: STANDARD full automatic #:chl.N.euca:rem:REFERENCE 2 (bases 1 to 5431) #:chl.N.euca:rem: AUTHORS Schreiner,M., Geisert,M., Oed,M., Arendes,J., Guengerich,U., #:chl.N.euca:rem: Breter,H.J., Stueber,K. and Weinblum,D. #:chl.N.euca:rem: TITLE Phylogenetic relationship of the green alga Nanochlorum eukaryotum #:chl.N.euca:rem: deduced from its chloroplast rRNA sequences #:chl.N.euca:rem: JOURNAL Unpublished #:chl.N.euca:rem: STANDARD full automatic #:chl.N.euca:rem:FEATURES Location/Qualifiers #:chl.N.euca:rem: source 1..5431 #:chl.N.euca:rem: /organism="Nanochlorum eucaryotum" #:chl.N.euca:rem: /chloroplast #:chl.N.euca:rem: rRNA 90..1551 #:chl.N.euca:rem: /product="16S ribosomal RNA" #:chl.N.euca:rem: tRNA 1749..1819 #:chl.N.euca:rem: /product="tRNA-Ile" #:chl.N.euca:rem: tRNA 1914..1986 #:chl.N.euca:rem: /product="tRNA-Ala" #:chl.N.euca:rem: rRNA 2010..4964 #:chl.N.euca:rem: /product="23S ribosomal RNA" #:chl.N.euca:rem:BASE COUNT 1634 a 1073 c 1403 g 1321 t #:chl.N.euca:rem:ORIGIN #:chl.N.euca:rem:LOCUS CHNERRNA 5431 bp DNA PLN 24-NOV-1993 #:chl.N.euca:rem:DEFINITION N.eucaryotum chloroplast 16S rRNA, tRNA-Ile, tRNA-Ala and 23S rRNA #:chl.N.euca:rem: genes. #:chl.N.euca:rem:ACCESSION X76084 #:chl.N.euca:rem:KEYWORDS 16S ribosomal RNA; 23S ribosomal RNA; tRNA-Ala; tRNA-Ile. #:chl.N.euca:rem:SOURCE Nanochlorum eucaryotum #:chl.N.euca:rem: ORGANISM Chloroplast Nanochlorum eucaryotum #:chl.N.euca:rem: Eukaryota; Plantae; Thallobionta; Chlorophyta; Chlorophyceae. #:chl.N.euca:rem:REFERENCE 1 (bases 1 to 5431) #:chl.N.euca:rem: AUTHORS Weinblum,D. #:chl.N.euca:rem: TITLE Direct Submission #:chl.N.euca:rem: JOURNAL Submitted (10-NOV-1993) to the EMBL/GenBank/DDBJ databases. D. #:chl.N.euca:rem: Weinblum, Inst. fuer Physiologiche Chemie, Univ. Mainz, Duesbergweg #:chl.N.euca:rem: 6, 55099 Mainz, FRG #:chl.N.euca:rem: STANDARD full automatic #:chl.N.euca:rem:REFERENCE 2 (bases 1 to 5431) #:chl.N.euca:rem: AUTHORS Schreiner,M., Geisert,M., Oed,M., Arendes,J., Guengerich,U., #:chl.N.euca:rem: Breter,H.J., Stueber,K. and Weinblum,D. #:chl.N.euca:rem: TITLE Phylogenetic relationship of the green alga Nanochlorum eukaryotum #:chl.N.euca:rem: deduced from its chloroplast rRNA sequences #:chl.N.euca:rem: JOURNAL Unpublished #:chl.N.euca:rem: STANDARD full automatic #:chl.N.euca:rem:FEATURES Location/Qualifiers #:chl.N.euca:rem: source 1..5431 #:chl.N.euca:rem: /organism="Nanochlorum eucaryotum" #:chl.N.euca:rem: /chloroplast #:chl.N.euca:rem: rRNA 90..1551 #:chl.N.euca:rem: /product="16S ribosomal RNA" #:chl.N.euca:rem: tRNA 1749..1819 #:chl.N.euca:rem: /product="tRNA-Ile" #:chl.N.euca:rem: tRNA 1914..1986 #:chl.N.euca:rem: /product="tRNA-Ala" #:chl.N.euca:rem: rRNA 2010..4964 #:chl.N.euca:rem: /product="23S ribosomal RNA" #:chl.N.euca:rem:BASE COUNT 1634 a 1073 c 1403 g 1321 t #:chl.N.euca:rem:ORIGIN #:A.nidulans:name:Anacystis nidulans #:A.nidulans:subsp: #:A.nidulans:strain: #:A.nidulans:atcc:???? #:A.nidulans:acs:X03538 K01982 X01296 #:A.nidulans:auth: #:A.nidulans:title: #:A.nidulans:jour:Tomioka and Sugiura MGG191:46-50(1983) + get other reference #:A.nidulans:who:published #:A.nidulans:date:Aug 25 1983 #:A.nidulans:rem:Phylo:Eubacteria,Cyanobacteria,Anacystis #:Synech.sp.:name:Synechocystis sp. #:Synech.sp.:subsp: #:Synech.sp.:strain:PCC6803, #:Synech.sp.:atcc:PCC 6803 #:Synech.sp.:acs:D64000 #:Synech.sp.:auth:., Sugiura,M. and Tabata,S. #:Synech.sp.:title:cyanobacterium Synechocystis sp. strain PCC6803. I. Sequence #:Synech.sp.:jour:DNA Res. 2 (4), 153-166 (1995) #:Synech.sp.:who: #:Synech.sp.:date:21-NOV-1995 #:Synech.sp.:title:features in the 1 Mb region from map positions 64% to 92% of #:Synech.sp.:title:the genome #:Synech.sp.:auth:Kaneko,T., Tanaka,A., Sato,S., Kotani,H., Sazuka,T., Miyajima,N #:Synech.sp.:title:Sequence analysis of the genome of the unicellular #:Synech.sp.:rem:ref:1 (bases 1 to 146271) #:Synech.sp.:rem:KEYWORDS:16S rRNA; 23S rRNA; 5S rRNA; carboxyl-terminal #:Synech.sp.:rem:: processing protease; cytochrome b6; cytochrome b6-f complex #:Synech.sp.:rem:: subunit 4; ferredoxin; glucose transport protein; #:Synech.sp.:rem:: hypothetical protein; plastocyanin precursor; ribulose #:Synech.sp.:rem:: bisphosphate carboxylase large subunit; ribulose #:Synech.sp.:rem:: bisphosphate carboxylase small subunit; tRNA-Ala; tRNA-Gly; #:Synech.sp.:rem:: tRNA-Ile; tRNA-Ser. #:Synech.sp.:rem:GenBank ACCESSION:D64000 #:Synech.sp.:rem:Submitted (30-Aug-1995) to DDBJ by: #:Synech.sp.:rem:Satoshi Tabata #:Synech.sp.:rem:Dept. of Gene Structure 2 #:Synech.sp.:rem:Kazusa DNA Research Institute #:Synech.sp.:rem:1532-3, Yanauchino #:Synech.sp.:rem:Kisarazu, Chiba 292 #:Synech.sp.:rem:Japan #:Synech.sp.:rem:Phone: 0438-52-3933 #:Synech.sp.:rem:Email: tabata@kazusa.or.jp #:Synech.sp.:rem:Fax: 0438-52-3934. #:M.aeru.PCC:name:Microcystis aeruginosa #:M.aeru.PCC:subsp: #:M.aeru.PCC:strain: #:M.aeru.PCC:atcc: #:M.aeru.PCC:acs:AF139299 #:M.aeru.PCC:auth: #:M.aeru.PCC:title: #:M.aeru.PCC:jour: #:M.aeru.PCC:who: #:M.aeru.PCC:date: #:chl.P.wick:name:Chloroplast Prototheca wickerhamii. #:chl.P.wick:subsp: #:chl.P.wick:strain: #:chl.P.wick:atcc: #:chl.P.wick:acs:AJ222802 #:chl.P.wick:auth:Knauf,U., Wolff,G., Kueck,U. and Hachtel,W. #:chl.P.wick:title:5.0 kb part of the ribosomal-RNA genecluster from the plastid #:chl.P.wick:jour:Unpublished #:chl.P.wick:who: #:chl.P.wick:date:17-JAN-1998 #:chl.P.wick:title:DNA of the colourless alga Prototheca wickerhamii #:chl.P.wick:rem:ref:1 (bases 1 to 5001) #:chl.P.wick:rem:ref:2 (bases 1 to 5001) #:chl.P.wick:rem:auth:Knauf,U. #:chl.P.wick:rem:jour:Submitted (23-DEC-1997) Knauf U., Molekulare Biochemie, #:chl.P.wick:rem:: Botanisches Institut der Universitaet Bonn, Kirschallee 1 #:chl.P.wick:rem:: 53115 Bonn FRG #:chl.P.wick:rem:title:Direct Submission #:chl.P.wick:rem:KEYWORDS:16S ribosomal RNA; 23S ribosomal RNA; 30S ribosomal #:chl.P.wick:rem:: protein S4; chloroplast; rps4 gene; rrn16 gene; rrn23 gene; #:chl.P.wick:rem:: trnA gene; tRNA-Ala (UGC); tRNA-Asn (GUU); tRNA-Ile (GAU); #:chl.P.wick:rem:: trnI gene; trnN gene. #:chl.P.wick:rem:GenBank ACCESSION:AJ2228 2 #:chl.P.zopf:name:Prototheca zopfii #:chl.P.zopf:subsp: #:chl.P.zopf:strain: #:chl.P.zopf:atcc: #:chl.P.zopf:acs:X74006 #:chl.P.zopf:auth: #:chl.P.zopf:title: #:chl.P.zopf:jour: #:chl.P.zopf:who: #:chl.P.zopf:date: #:chl.P.zopf:rem:ID PZ18SRNA standard; circular DNA; PLN; 1515 BP. #:chl.P.zopf:rem:XX #:chl.P.zopf:rem:AC X74006; #:chl.P.zopf:rem:XX #:chl.P.zopf:rem:DT 15-JUL-1993 (Rel. 36, Created) #:chl.P.zopf:rem:DT 15-JUL-1993 (Rel. 36, Last updated, Version 1) #:chl.P.zopf:rem:XX #:chl.P.zopf:rem:DE P.zopfii plastid gene for 18S small subunit rRNA #:chl.P.zopf:rem:XX #:chl.P.zopf:rem:KW 16S ribosomal RNA; small subunit. #:chl.P.zopf:rem:XX #:chl.P.zopf:rem:OS Prototheca zopfii #:chl.P.zopf:rem:OC Eukaryota; Plantae; Thallobionta; Chlorophycota; Chlorophyceae; #:chl.P.zopf:rem:OC Chlorococcales. #:chl.P.zopf:rem:XX #:chl.P.zopf:rem:OG Plastid #:chl.P.zopf:rem:XX #:chl.P.zopf:rem:RN [1] #:chl.P.zopf:rem:RP 1-1515 #:chl.P.zopf:rem:RA Huss V.A.R.; #:chl.P.zopf:rem:RT ; #:chl.P.zopf:rem:RL Submitted (09-JUL-1993) on tape to the EMBL Data Library by: #:chl.P.zopf:rem:RL V.A. Huss, Inst fuer Botanik & Pharmazeutische Biol, Universitaet #:chl.P.zopf:rem:RL Erlangen, Staudtstr. 5, 91058 Erlangen, FRG #:chl.P.zopf:rem:XX #:chl.P.zopf:rem:RN [2] #:chl.P.zopf:rem:RP 1-1515 #:chl.P.zopf:rem:RA Huss V.A.R., Gemple B.; #:chl.P.zopf:rem:RT ; #:chl.P.zopf:rem:RL Unpublished. #:chl.P.zopf:rem:XX #:chl.P.zopf:rem:FH Key Location/Qualifiers #:chl.P.zopf:rem:FH #:chl.P.zopf:rem:FT primer_bind 1..30 #:chl.P.zopf:rem:FT /note="PCR amplification 5'-primer" #:chl.P.zopf:rem:FT rRNA 1..1515 #:chl.P.zopf:rem:FT /note="16S small subunit" #:chl.P.zopf:rem:FT source 1..1515 #:chl.P.zopf:rem:FT /organism="Prototheca zopfii" #:chl.P.zopf:rem:FT /strain="SAG 263-1a" #:chl.P.zopf:rem:FT /note="plastid" #:chl.P.zopf:rem:FT primer_bind complement(1493..1515) #:chl.P.zopf:rem:FT /note="PCR amplification 3'-primer" #:chl.P.zopf:rem:XX #:chl.P.zopf:rem:SQ Sequence 1515 BP; 506 A; 234 C; 331 G; 440 T; 4 other; #:chl.C.euga:name:Chlamydomonas eugametos chloroplast SSU rRNA #:chl.C.euga:subsp: #:chl.C.euga:strain: #:chl.C.euga:atcc: #:chl.C.euga:acs:X15850 #:chl.C.euga:auth: #:chl.C.euga:title: #:chl.C.euga:jour: #:chl.C.euga:who: #:chl.C.euga:date: #:chl.C.moew:name:Chlamydomonas moewusii #:chl.C.moew:subsp: #:chl.C.moew:strain: #:chl.C.moew:atcc: #:chl.C.moew:acs:X15850 #:chl.C.moew:auth: #:chl.C.moew:title: #:chl.C.moew:jour: #:chl.C.moew:who: #:chl.C.moew:date: #:chl.C.moew:rem:LOCUS MCSSU 2948 bp DNA PLN 27-JUN-1991 #:chl.C.moew:rem:DEFINITION C.moewusii chloroplast small subunit (SSU) rRNA gene #:chl.C.moew:rem:ACCESSION X15850 #:chl.C.moew:rem:KEYWORDS rRNA; small subunit rRNA. #:chl.C.moew:rem:SOURCE Chlamydomonas moewusii #:chl.C.moew:rem: ORGANISM Chloroplast Chlamydomonas moewusii #:chl.C.moew:rem: Eukaryota; Plantae; Thallobionta; Chlorophycota; Chlorophyceae; #:chl.C.moew:rem: Volvocales; Chlamydomonadaceae. #:chl.C.moew:rem:REFERENCE 1 (bases 1 to 2948) #:chl.C.moew:rem: AUTHORS Durocher,V., Gauthier,A., Bellemare,G. and Lemieux,C. #:chl.C.moew:rem: TITLE An optional group I intron between the chloroplast small subunit #:chl.C.moew:rem: rRNA genes of Chlamydomonas moewusii and C. eugametos #:chl.C.moew:rem: JOURNAL Curr. Genet. 15, 277-282 (1989) #:chl.C.moew:rem: STANDARD full automatic #:chl.C.moew:rem:FEATURES Location/Qualifiers #:chl.C.moew:rem: source 1..2948 #:chl.C.moew:rem: /organism="Chlamydomonas moewusii" #:chl.C.moew:rem: /chloroplast #:chl.C.moew:rem: exon <1..1357 #:chl.C.moew:rem: /number=1 #:chl.C.moew:rem: /product="Small Subunit rRNA" #:chl.C.moew:rem: /gene="SSU rRNA" #:chl.C.moew:rem: exon 1760..>2948 #:chl.C.moew:rem: /number=2 #:chl.C.moew:rem: /product="Small Subunit rRNA" #:chl.C.moew:rem: /gene="SSU rRNA" #:chl.C.moew:rem: intron 1358..1759 #:chl.C.moew:rem: /number=1 #:chl.C.moew:rem: /cons_splice=(5'site:NO,3'site:NO) #:chl.C.moew:rem: mRNA join(868..1357,1760..2751) #:chl.C.moew:rem: /gene="SSU rRNA" #:chl.C.moew:rem: prim_transcript <1..>2948 #:chl.C.moew:rem: /gene="SSU rRNA" #:chl.C.moew:rem: repeat_unit 34..54 #:chl.C.moew:rem: /rpt_type=INVERTED #:chl.C.moew:rem: /note="IR1" #:chl.C.moew:rem: repeat_unit 186..206 #:chl.C.moew:rem: /rpt_type=INVERTED #:chl.C.moew:rem: /note="IR1" #:chl.C.moew:rem: repeat_unit 1503..1523 #:chl.C.moew:rem: /rpt_type=INVERTED #:chl.C.moew:rem: /note="IR1" #:chl.C.moew:rem: repeat_unit 1675..1695 #:chl.C.moew:rem: /rpt_type=INVERTED #:chl.C.moew:rem: /note="IR1" #:chl.C.moew:rem: repeat_unit 2915..2935 #:chl.C.moew:rem: /rpt_type=INVERTED #:chl.C.moew:rem: /note="IR1" #:chl.C.moew:rem: repeat_unit 85..105 #:chl.C.moew:rem: /rpt_type=INVERTED #:chl.C.moew:rem: /note="IR2" #:chl.C.moew:rem: repeat_unit 145..151 #:chl.C.moew:rem: /rpt_type=INVERTED #:chl.C.moew:rem: /note="IR3" #:chl.C.moew:rem: repeat_unit 1638..1656 #:chl.C.moew:rem: /rpt_type=INVERTED #:chl.C.moew:rem: /note="IR4" #:chl.C.moew:rem: repeat_unit 2840..2860 #:chl.C.moew:rem: /rpt_type=INVERTED #:chl.C.moew:rem: /note="IR5" #:chl.C.moew:rem: repeat_unit 217..231 #:chl.C.moew:rem: /rpt_type=DIRECT #:chl.C.moew:rem: /note="D1" #:chl.C.moew:rem: repeat_unit 232..246 #:chl.C.moew:rem: /rpt_type=DIRECT #:chl.C.moew:rem: /note="D1" #:chl.C.moew:rem: repeat_unit 247..261 #:chl.C.moew:rem: /rpt_type=DIRECT #:chl.C.moew:rem: /note="D1" #:chl.C.moew:rem: repeat_unit 515..520 #:chl.C.moew:rem: /rpt_type=DIRECT #:chl.C.moew:rem: /note="D2" #:chl.C.moew:rem: repeat_unit 521..526 #:chl.C.moew:rem: /rpt_type=DIRECT #:chl.C.moew:rem: /note="D2" #:chl.C.moew:rem: repeat_unit 527..532 #:chl.C.moew:rem: /rpt_type=DIRECT #:chl.C.moew:rem: /note="D2" #:chl.C.moew:rem: repeat_unit 533..538 #:chl.C.moew:rem: /rpt_type=DIRECT #:chl.C.moew:rem: /note="D2" #:chl.C.moew:rem: repeat_unit 539..544 #:chl.C.moew:rem: /rpt_type=DIRECT #:chl.C.moew:rem: /note="D2" #:chl.C.moew:rem: repeat_unit 545..560 #:chl.C.moew:rem: /rpt_type=DIRECT #:chl.C.moew:rem: /note="D2" #:chl.C.moew:rem: repeat_unit 561..565 #:chl.C.moew:rem: /rpt_type=DIRECT #:chl.C.moew:rem: /note="D2" #:chl.C.moew:rem: CDS join(868..1357,1760..2751) #:chl.C.moew:rem: /product="Small Subunit rRNA" #:chl.C.moew:rem: /gene="SSU rRNA" #:chl.C.moew:rem: /note="30 stops when translation attempted, frame 1, code #:chl.C.moew:rem: 0" #:chl.C.moew:rem:BASE COUNT 899 a 620 c 769 g 660 t #:chl.C.moew:rem:ORIGIN #:chl.C.pall:name:Chlamydomonas pallidostigmatica #:chl.C.pall:subsp: #:chl.C.pall:strain: #:chl.C.pall:atcc: #:chl.C.pall:acs:L39865 #:chl.C.pall:auth: #:chl.C.pall:title: #:chl.C.pall:jour: #:chl.C.pall:who: #:chl.C.pall:date: #:chl.C.pall:rem:LOCUS CRECPCPRG 4153 bp DNA PLN 01-JUN-1995 #:chl.C.pall:rem:DEFINITION Chlamydomonas pallidostigmatica chloroplast small subunit ribosomal #:chl.C.pall:rem: RNA gene, partial CDS. #:chl.C.pall:rem:ACCESSION L39865 #:chl.C.pall:rem:KEYWORDS 16S-like ribosomal RNA; chloroplast; group I intron; #:chl.C.pall:rem: intron-encoded DNA endonuclease; small subunit ribosomal RNA. #:chl.C.pall:rem:SOURCE Chlamydomonas pallidostigmatica DNA. #:chl.C.pall:rem: ORGANISM Chlamydomonas pallidostigmatica #:chl.C.pall:rem: Eukaryotae; mitochondrial eukaryotes; Chlorophyta/Embryophyta #:chl.C.pall:rem: group; Chlorophyta; Chlorophyceae; Volvocales; Chlamydomonadaceae; #:chl.C.pall:rem: Chlamydomonas. #:chl.C.pall:rem:REFERENCE 1 (bases 1 to 4153) #:chl.C.pall:rem: AUTHORS Turmel,M., Mercier,J.-P., Cote,V., Otis,C. and Lemieux,C. #:chl.C.pall:rem: TITLE The site-specific DNA endonuclease encoded by a group I intron in #:chl.C.pall:rem: the Chlamydomonas pallidostigmatica chloroplast small subunit rRNA #:chl.C.pall:rem: gene introduces a single-strand break under low Mg+2 concentration #:chl.C.pall:rem: JOURNAL Unpublished (1995) #:chl.C.pall:rem:COMMENT #:chl.C.pall:rem: NCBI gi: 845296 #:chl.C.pall:rem:FEATURES Location/Qualifiers #:chl.C.pall:rem: source 1..4153 #:chl.C.pall:rem: /organism="Chlamydomonas pallidostigmatica" #:chl.C.pall:rem: /sequenced_mol="DNA" #:chl.C.pall:rem: exon 1..461 #:chl.C.pall:rem: /partial #:chl.C.pall:rem: /number=1 #:chl.C.pall:rem: primer_bind 1..19 #:chl.C.pall:rem: /note="5' primer" #:chl.C.pall:rem: prim_transcript 1..4153 #:chl.C.pall:rem: intron 462..1872 #:chl.C.pall:rem: /note="group I intron containing an internal open reading #:chl.C.pall:rem: frame; does not fit consensus" #:chl.C.pall:rem: /number=1 #:chl.C.pall:rem: /cons_splice=(5'site:no,3'site:no) #:chl.C.pall:rem: CDS 719..1423 #:chl.C.pall:rem: /note="NCBI gi: 845297" #:chl.C.pall:rem: /codon_start=1 #:chl.C.pall:rem: /product="site-specific DNA endonuclease I-CpaII" #:chl.C.pall:rem: /translation="MTDSKSRNNNNFLSNNLLPLTDDEKALIAGTLLGDAHIQKRGDS #:chl.C.pall:rem: YRLKIAHGLDHEELVVWKYNRLIRLCQTTQPPRVETYSTKLKSGVLPQGVVFYTSSGK #:chl.C.pall:rem: YLKETYDLFYKQTADGRRVKTITQELIDSLPKHPLVLAAFFMDDGSVRSDCYSGKIAT #:chl.C.pall:rem: PGFAGKEESQLLCNYLHSWDVQANVVAHKKANNQYYIGLPAKTFGRFINIIEPYVREV #:chl.C.pall:rem: PALCYKLNESRKPRND" #:chl.C.pall:rem: exon 1873..2157 #:chl.C.pall:rem: /number=2 #:chl.C.pall:rem: intron 2158..3446 #:chl.C.pall:rem: /note="group I intron containing an internal open reading #:chl.C.pall:rem: frame; does not fit consensus" #:chl.C.pall:rem: /number=2 #:chl.C.pall:rem: /cons_splice=(5'site:no,3'site:no) #:chl.C.pall:rem: CDS 2604..3392 #:chl.C.pall:rem: /note="NCBI gi: 845298" #:chl.C.pall:rem: /codon_start=1 #:chl.C.pall:rem: /function="unknown" #:chl.C.pall:rem: /product="putative protein of 262 amino acids" #:chl.C.pall:rem: /translation="MAQVPLTEIEKSVLCGTILGDASFAISDGYKNARFQSNHSTNQL #:chl.C.pall:rem: TWFFWKFFVILKDFTKPTGLIYSEPSGKQLINQTSEASFFEPGEDSLEIPFGKLKIAS #:chl.C.pall:rem: LADAKLTELHSVICNKNRKTIERSWLNHMNNYFLMTVWLDDGSMTSGRQGILSFNSYP #:chl.C.pall:rem: ADQQQIFRDYLLQVWGIETRLQDTGQKMQNGQPNCRISIKDQENLLNLLRYIAPVVPV #:chl.C.pall:rem: REMLYKVCFMAESNLSLSQRWKTEVKGLVRPEFAEEIDKIYAKM" #:chl.C.pall:rem: exon 3447..4153 #:chl.C.pall:rem: /partial #:chl.C.pall:rem: /number=3 #:chl.C.pall:rem: primer_bind 4133..4153 #:chl.C.pall:rem: /note="3' primer" #:chl.C.pall:rem:BASE COUNT 1286 a 813 c 998 g 1056 t #:chl.C.pall:rem:ORIGIN #:chl.C.rein:name:chloroplast,Chlamydomonas reinhardii #:chl.C.rein:subsp: #:chl.C.rein:strain: #:chl.C.rein:atcc:???? #:chl.C.rein:acs:J01395 #:chl.C.rein:auth: #:chl.C.rein:title: #:chl.C.rein:jour:Dron,Rahire,Rochaix NAR 10:7609(1982) #:chl.C.rein:who:published #:chl.C.rein:date:Jan.7 1983 #:chl.C.rein:rem:Phylo:Eubacteria,Cyanobacteria,chloroplast #:chl.M.squa:name:Mantoniella squamata. #:chl.M.squa:subsp: #:chl.M.squa:strain: #:chl.M.squa:atcc: #:chl.M.squa:acs:X90641 #:chl.M.squa:auth:Kranz,H.D. and Huss,V.A.R. #:chl.M.squa:title: #:chl.M.squa:jour:Unpublished #:chl.M.squa:who: #:chl.M.squa:date:17-JAN-1998 #:chl.M.squa:rem:ref:1 (bases 1 to 1688) #:chl.M.squa:rem:ref:2 (bases 1 to 1688) #:chl.M.squa:rem:auth:Huss,V.A.R. #:chl.M.squa:rem:jour:Submitted (09-AUG-1995) V.A.R. Huss, Inst.f. Botanik und #:chl.M.squa:rem:: Pharmazeut. Biologie, Univ. Erlangen, Staudtstr. 5, D- #:chl.M.squa:rem:: 91058 Erlangen, FRG #:chl.M.squa:rem:title:Direct Submission #:chl.M.squa:rem:KEYWORDS:16S rRNA gene; 16S small subunit ribosomal RNA; #:chl.M.squa:rem:: tRNA-Ala; tRNA-Ile. #:chl.M.squa:rem:GenBank ACCESSION:X90641 #:chl.C.ke.1:name:Chlorella kessleri #:chl.C.ke.1:subsp: #:chl.C.ke.1:strain: #:chl.C.ke.1:atcc: #:chl.C.ke.1:acs:X65099 #:chl.C.ke.1:auth: #:chl.C.ke.1:title: #:chl.C.ke.1:jour: #:chl.C.ke.1:who: #:chl.C.ke.1:date: #:chl.C.ke.1:rem:LOCUS CHLCPSSRRN 1592 bp ds-DNA ORG 23-JUN-1992 #:chl.C.ke.1:rem:DEFINITION C.kessleri plastid DNA for 16S-like rRNA small subunit #:chl.C.ke.1:rem:ACCESSION X65099 #:chl.C.ke.1:rem:KEYWORDS small subunit ribosomal RNA. #:chl.C.ke.1:rem:SOURCE Chloroplast Chlorella kessleri DNA. #:chl.C.ke.1:rem: ORGANISM Chloroplast Chlorella kessleri #:chl.C.ke.1:rem: Eukaryota; Chlorophycota; Chlorophyceae; Chlorococcales; #:chl.C.ke.1:rem: Oocystaceae. #:chl.C.ke.1:rem:REFERENCE 1 (bases 1 to 1592) #:chl.C.ke.1:rem: AUTHORS Huss,V.A., Hirsh,E. and Giovannoni,S.J. #:chl.C.ke.1:rem: JOURNAL Unpublished (1992) #:chl.C.ke.1:rem: STANDARD full automatic #:chl.C.ke.1:rem:COMMENT *source: strain=211-11g (type strain); #:chl.C.ke.1:rem: From EMBL entry CKSSRRNA; dated 01-APR-1992. #:chl.C.ke.1:rem:FEATURES Location/Qualifiers #:chl.C.ke.1:rem: rRNA 1..1592 #:chl.C.ke.1:rem: /product="small subunit rRNA" #:chl.C.ke.1:rem: misc_feature 1..30 #:chl.C.ke.1:rem: /note="PCR amplification primer" #:chl.C.ke.1:rem:BASE COUNT 429 a 338 c 474 g 348 t 3 others #:chl.C.ke.1:rem:ORIGIN #:chl.C.ke.2:name:Chlorella kessleri #:chl.C.ke.2:subsp: #:chl.C.ke.2:strain: #:chl.C.ke.2:atcc: #:chl.C.ke.2:acs:D11346 #:chl.C.ke.2:auth: #:chl.C.ke.2:title: #:chl.C.ke.2:jour: #:chl.C.ke.2:who: #:chl.C.ke.2:date: #:chl.C.ke.2:rem:LOCUS CHLCP16S 1545 bp ss-rRNA RNA 04-SEP-1994 #:chl.C.ke.2:rem:DEFINITION Chlorella kessleri chloroplast 16S ribosomal RNA. #:chl.C.ke.2:rem:ACCESSION D11346 #:chl.C.ke.2:rem:KEYWORDS chloroplast 16S ribosomal RNA; protein synthesis. #:chl.C.ke.2:rem:SOURCE Chlorella kessleri (strain Chlorella kessleri) rRNA. #:chl.C.ke.2:rem: ORGANISM Chlorella kessleri #:chl.C.ke.2:rem: Eukaryota; Chlorophycota; Chlorophyceae; Chlorococcales; #:chl.C.ke.2:rem: Oocystaceae. #:chl.C.ke.2:rem:REFERENCE 1 (bases 1 to 1545) #:chl.C.ke.2:rem: AUTHORS Oyaizu,H., Matsumoto,S. and Takeda,H. #:chl.C.ke.2:rem: TITLE Polyphyletic origins of chlorophyte chloroplasts #:chl.C.ke.2:rem: JOURNAL Unpublished (1992) #:chl.C.ke.2:rem: STANDARD full automatic #:chl.C.ke.2:rem:COMMENT #:chl.C.ke.2:rem: These data kindly submitted in computer readable form by: Hiroshi #:chl.C.ke.2:rem: Oyaizu #:chl.C.ke.2:rem: Faculty of Agriculture #:chl.C.ke.2:rem: The University of Tokyo #:chl.C.ke.2:rem: Bunkyo-ku, Tokyo 183 #:chl.C.ke.2:rem: Japan #:chl.C.ke.2:rem: Phone: 03-3812-2111 x5240 #:chl.C.ke.2:rem: Fax: 03-3812-0544. #:chl.C.ke.2:rem: NCBI gi: 534861 #:chl.C.ke.2:rem:FEATURES Location/Qualifiers #:chl.C.ke.2:rem: source 1..1545 #:chl.C.ke.2:rem: /organism="Chlorella kessleri" #:chl.C.ke.2:rem: /strain="Chlorella kessleri" #:chl.C.ke.2:rem: /sequenced_mol="rRNA" #:chl.C.ke.2:rem:BASE COUNT 422 a 323 c 458 g 340 t 2 others #:chl.C.ke.2:rem:ORIGIN #:chl.C.frag:name:Codium fragile #:chl.C.frag:subsp: #:chl.C.frag:strain: #:chl.C.frag:atcc: #:chl.C.frag:acs:U08345 #:chl.C.frag:auth: #:chl.C.frag:title: #:chl.C.frag:jour: #:chl.C.frag:who: #:chl.C.frag:date: #:(4)-Strept:name: #:(4)-Strept:subsp: #:(4)-Strept:strain: #:(4)-Strept:atcc: #:(4)-Strept:acs:DIVIDER #:(4)-Strept:auth: #:(4)-Strept:title: #:(4)-Strept:jour: #:(4)-Strept:who:DAMBERGER, SIMON HEL,Porter B256,, #:(4)-Strept:date:Thu Nov 17 08:53:47 1994 #:chl.Cha.sp:name:Chara spec. #:chl.Cha.sp:subsp: #:chl.Cha.sp:strain: #:chl.Cha.sp:atcc: #:chl.Cha.sp:acs:X75519 #:chl.Cha.sp:auth: #:chl.Cha.sp:title: #:chl.Cha.sp:jour: #:chl.Cha.sp:who: #:chl.Cha.sp:date: #:chl.Cha.sp:rem:LOCUS CSPL16SR 1515 bp DNA PLN 08-JUN-1995 #:chl.Cha.sp:rem:DEFINITION Chara spec. plastid 16S rRNA gene. #:chl.Cha.sp:rem:ACCESSION X75519 #:chl.Cha.sp:rem:KEYWORDS 16S ribosomal RNA. #:chl.Cha.sp:rem:SOURCE Chara sp. #:chl.Cha.sp:rem: ORGANISM Chara sp. #:chl.Cha.sp:rem: Eukaryotae; mitochondrial eukaryotes; Chlorophyta/Embryophyta #:chl.Cha.sp:rem: group; Charophyta/Embryophyta group; Charophyta; Charales; #:chl.Cha.sp:rem: Characeae; Chara. #:chl.Cha.sp:rem:REFERENCE 1 (bases 1 to 1515) #:chl.Cha.sp:rem: AUTHORS Huss,V.A.R. #:chl.Cha.sp:rem: TITLE Direct Submission #:chl.Cha.sp:rem: JOURNAL Submitted (02-NOV-1993) to the EMBL/GenBank/DDBJ databases. V. A. #:chl.Cha.sp:rem: R. Huss, Inst fuer Botanik & Pharmazeutische, Biologie, #:chl.Cha.sp:rem: Universitaet Erlangen, Staudtstr. 5, 91058 Erlangen, FRG #:chl.Cha.sp:rem:REFERENCE 2 (bases 1 to 1515) #:chl.Cha.sp:rem: AUTHORS Huss,V.A.R., Straub,S. and Kranz,H.D. #:chl.Cha.sp:rem: JOURNAL Unpublished #:chl.Cha.sp:rem:COMMENT #:chl.Cha.sp:rem: NCBI gi: 860911 #:chl.Cha.sp:rem:FEATURES Location/Qualifiers #:chl.Cha.sp:rem: source 1..1515 #:chl.Cha.sp:rem: /organism="Chara sp." #:chl.Cha.sp:rem: /note="plastid" #:chl.Cha.sp:rem: primer_bind 1..30 #:chl.Cha.sp:rem: /note="PCR amplification 5'-primer" #:chl.Cha.sp:rem: rRNA 1..1515 #:chl.Cha.sp:rem: /product="16S small subunit ribosomal RNA" #:chl.Cha.sp:rem: primer_bind complement(1493..1515) #:chl.Cha.sp:rem: /note="PCR amplification 3'-primer" #:chl.Cha.sp:rem:BASE COUNT 397 a 343 c 460 g 312 t 3 others #:chl.Cha.sp:rem:ORIGIN #:chl.C.orbi:name:Coleochaete orbicularis #:chl.C.orbi:subsp: #:chl.C.orbi:strain: #:chl.C.orbi:atcc: #:chl.C.orbi:acs:U24579 #:chl.C.orbi:auth: #:chl.C.orbi:title: #:chl.C.orbi:jour: #:chl.C.orbi:who: #:chl.C.orbi:date: #:chl.C.orbi:rem:LOCUS COU24579 1617 bp DNA PLN 02-AUG-1995 #:chl.C.orbi:rem:DEFINITION Coleochaete orbicularis chloroplast 16S rRNA gene, partial #:chl.C.orbi:rem: sequence. #:chl.C.orbi:rem:ACCESSION U24579 #:chl.C.orbi:rem:KEYWORDS . #:chl.C.orbi:rem:SOURCE Coleochaete orbicularis. #:chl.C.orbi:rem: ORGANISM Chloroplast Coleochaete orbicularis #:chl.C.orbi:rem: Eukaryotae; mitochondrial eukaryotes; eukaryote crown group; #:chl.C.orbi:rem: Chlorophyta/Embryophyta group; Charophyta/Embryophyta group; #:chl.C.orbi:rem: Charophyta; Coleochaetales; Coleochaetaceae; Coleochaete. #:chl.C.orbi:rem:REFERENCE 1 (bases 1 to 1617) #:chl.C.orbi:rem: AUTHORS Manhart,J.R. #:chl.C.orbi:rem: TITLE Chloroplast 16S rDNA sequences and phylogenetic relationships of #:chl.C.orbi:rem: fern allies and ferns #:chl.C.orbi:rem: JOURNAL Unpublished (1995) #:chl.C.orbi:rem:REFERENCE 2 (bases 1 to 1617) #:chl.C.orbi:rem: AUTHORS Manhart,J.R. #:chl.C.orbi:rem: TITLE Direct Submission #:chl.C.orbi:rem: JOURNAL Submitted (03-APR-1995) James R. Manhart, Biology, Texas A&M #:chl.C.orbi:rem: University, Department of Biology, Texas A&M University, College #:chl.C.orbi:rem: Station, TX 77843-3258, USA #:chl.C.orbi:rem:COMMENT #:chl.C.orbi:rem: NCBI gi: 924735 #:chl.C.orbi:rem:FEATURES Location/Qualifiers #:chl.C.orbi:rem: source 1..1617 #:chl.C.orbi:rem: /organism="Coleochaete orbicularis" #:chl.C.orbi:rem: /chloroplast #:chl.C.orbi:rem: rRNA <1..1457 #:chl.C.orbi:rem: /product="16S rRNA" #:chl.C.orbi:rem:BASE COUNT 442 a 342 c 464 g 369 t #:chl.C.orbi:rem:ORIGIN #:chl.K.flac:name:Klebsormidium flaccidum #:chl.K.flac:subsp: #:chl.K.flac:strain: #:chl.K.flac:atcc: #:chl.K.flac:acs:X75522 #:chl.K.flac:auth: #:chl.K.flac:title: #:chl.K.flac:jour: #:chl.K.flac:who: #:chl.K.flac:date: #:chl.K.flac:rem:LOCUS KFPL16SR 1511 bp DNA PLN 08-JUN-1995 #:chl.K.flac:rem:DEFINITION K.flaccidum plastid 16S rRNA gene. #:chl.K.flac:rem:ACCESSION X75522 #:chl.K.flac:rem:KEYWORDS 16S ribosomal RNA. #:chl.K.flac:rem:SOURCE Klebsormidium flaccidum. #:chl.K.flac:rem: ORGANISM Klebsormidium flaccidum #:chl.K.flac:rem: Eukaryotae; mitochondrial eukaryotes; Chlorophyta/Embryophyta #:chl.K.flac:rem: group; Charophyta/Embryophyta group; Charophyta; Klebsormidiales; #:chl.K.flac:rem: Klebsormidiaceae; Klebsormidium. #:chl.K.flac:rem:REFERENCE 1 (bases 1 to 1511) #:chl.K.flac:rem: AUTHORS Huss,V.A.R. #:chl.K.flac:rem: TITLE Direct Submission #:chl.K.flac:rem: JOURNAL Submitted (02-NOV-1993) to the EMBL/GenBank/DDBJ databases. V. A. #:chl.K.flac:rem: R. Huss, Inst fuer Botanik & Pharmazeutische, Biologie, #:chl.K.flac:rem: Universitaet Erlangen, Staudtstr. 5, 91058 Erlangen, FRG #:chl.K.flac:rem:REFERENCE 2 (bases 1 to 1511) #:chl.K.flac:rem: AUTHORS Huss,V.A.R., Straub,S. and Kranz,H.D. #:chl.K.flac:rem: JOURNAL Unpublished #:chl.K.flac:rem:COMMENT #:chl.K.flac:rem: NCBI gi: 861011 #:chl.K.flac:rem:FEATURES Location/Qualifiers #:chl.K.flac:rem: source 1..1511 #:chl.K.flac:rem: /organism="Klebsormidium flaccidum" #:chl.K.flac:rem: /strain="SAG 335-2b" #:chl.K.flac:rem: /note="plastid" #:chl.K.flac:rem: primer_bind 1..30 #:chl.K.flac:rem: /note="PCR amplification 5'-primer" #:chl.K.flac:rem: rRNA 1..1511 #:chl.K.flac:rem: /product="16S small subunit ribosomal RNA" #:chl.K.flac:rem: primer_bind complement(1489..1511) #:chl.K.flac:rem: /note="PCR amplification 3'-primer" #:chl.K.flac:rem:BASE COUNT 357 a 389 c 505 g 257 t 3 others #:chl.K.flac:rem:ORIGIN #:chl.S.maxi:name:Spirogyra maxima #:chl.S.maxi:subsp: #:chl.S.maxi:strain: #:chl.S.maxi:atcc: #:chl.S.maxi:acs:U24596 #:chl.S.maxi:auth: #:chl.S.maxi:title: #:chl.S.maxi:jour: #:chl.S.maxi:who: #:chl.S.maxi:date: #:chl.S.maxi:rem:LOCUS SMU24596 1657 bp DNA PLN 02-AUG-1995 #:chl.S.maxi:rem:DEFINITION Spirogyra maxima chloroplast 16S rRNA gene, complete sequence. #:chl.S.maxi:rem:ACCESSION U24596 #:chl.S.maxi:rem:KEYWORDS . #:chl.S.maxi:rem:SOURCE Spirogyra maxima. #:chl.S.maxi:rem: ORGANISM Chloroplast Spirogyra maxima #:chl.S.maxi:rem: Eukaryotae; mitochondrial eukaryotes; eukaryote crown group; #:chl.S.maxi:rem: Chlorophyta/Embryophyta group; Charophyta/Embryophyta group; #:chl.S.maxi:rem: Charophyta; Zygnematales; Zygnemataceae; Spirogyra. #:chl.S.maxi:rem:REFERENCE 1 (bases 1 to 1657) #:chl.S.maxi:rem: AUTHORS Manhart,J.R. #:chl.S.maxi:rem: TITLE Chloroplast 16S rDNA sequences and phylogenetic relationships of #:chl.S.maxi:rem: fern allies and ferns #:chl.S.maxi:rem: JOURNAL Unpublished (1995) #:chl.S.maxi:rem:REFERENCE 2 (bases 1 to 1657) #:chl.S.maxi:rem: AUTHORS Manhart,J.R. #:chl.S.maxi:rem: TITLE Direct Submission #:chl.S.maxi:rem: JOURNAL Submitted (03-APR-1995) James R. Manhart, Biology, Texas A&M #:chl.S.maxi:rem: University, Department of Biology, Texas A&M University, College #:chl.S.maxi:rem: Station, TX 77843-3258, USA #:chl.S.maxi:rem:COMMENT #:chl.S.maxi:rem: NCBI gi: 924747 #:chl.S.maxi:rem:FEATURES Location/Qualifiers #:chl.S.maxi:rem: source 1..1657 #:chl.S.maxi:rem: /organism="Spirogyra maxima" #:chl.S.maxi:rem: /chloroplast #:chl.S.maxi:rem: rRNA 97..1585 #:chl.S.maxi:rem: /product="16S rRNA" #:chl.S.maxi:rem:BASE COUNT 460 a 357 c 481 g 359 t #:chl.S.maxi:rem:ORIGIN #:chl.S.palu:name:Sphagnum palustre #:chl.S.palu:subsp: #:chl.S.palu:strain: #:chl.S.palu:atcc: #:chl.S.palu:acs:U24592 #:chl.S.palu:auth: #:chl.S.palu:title: #:chl.S.palu:jour: #:chl.S.palu:who: #:chl.S.palu:date: #:chl.S.palu:rem:LOCUS SPU24592 1435 bp DNA PLN 02-AUG-1995 #:chl.S.palu:rem:DEFINITION Sphagnum palustre chloroplast 16S rRNA gene, partial sequence. #:chl.S.palu:rem:ACCESSION U24592 #:chl.S.palu:rem:KEYWORDS . #:chl.S.palu:rem:SOURCE Sphagnum palustre. #:chl.S.palu:rem: ORGANISM Chloroplast Sphagnum palustre #:chl.S.palu:rem: Eukaryotae; mitochondrial eukaryotes; eukaryote crown group; #:chl.S.palu:rem: Chlorophyta/Embryophyta group; Charophyta/Embryophyta group; #:chl.S.palu:rem: Embryophyta; Bryophyta; Sphagnopsida; Sphagnales; Sphagnaceae; #:chl.S.palu:rem: Sphagnum. #:chl.S.palu:rem:REFERENCE 1 (bases 1 to 1435) #:chl.S.palu:rem: AUTHORS Manhart,J.R. #:chl.S.palu:rem: TITLE Chloroplast 16S rDNA sequences and phylogenetic relationships of #:chl.S.palu:rem: fern allies and ferns #:chl.S.palu:rem: JOURNAL Unpublished (1995) #:chl.S.palu:rem:REFERENCE 2 (bases 1 to 1435) #:chl.S.palu:rem: AUTHORS Manhart,J.R. #:chl.S.palu:rem: TITLE Direct Submission #:chl.S.palu:rem: JOURNAL Submitted (03-APR-1995) James R. Manhart, Biology, Texas A&M #:chl.S.palu:rem: University, Department of Biology, Texas A&M University, College #:chl.S.palu:rem: Station, TX 77843-3258, USA #:chl.S.palu:rem:COMMENT #:chl.S.palu:rem: NCBI gi: 924748 #:chl.S.palu:rem:FEATURES Location/Qualifiers #:chl.S.palu:rem: source 1..1435 #:chl.S.palu:rem: /organism="Sphagnum palustre" #:chl.S.palu:rem: /chloroplast #:chl.S.palu:rem: rRNA <1..>1435 #:chl.S.palu:rem: /product="16S rRNA" #:chl.S.palu:rem:BASE COUNT 364 a 350 c 458 g 263 t #:chl.S.palu:rem:ORIGIN #:chl.M.poly:name:chloroplast,Marchantia polymorpha(liverwort) #:chl.M.poly:subsp: #:chl.M.poly:strain: #:chl.M.poly:atcc: #:chl.M.poly:acs:X04465 #:chl.M.poly:auth: #:chl.M.poly:title: #:chl.M.poly:jour: #:chl.M.poly:who:published #:chl.M.poly:date:Sept. 30 1986 #:chl.M.poly:rem:Phylo:Eubacteria,Cyanobacteria,chloroplast #:chl.I.mela:name:Isoetes melanopoda #:chl.I.mela:subsp: #:chl.I.mela:strain: #:chl.I.mela:atcc: #:chl.I.mela:acs:U24585 #:chl.I.mela:auth: #:chl.I.mela:title: #:chl.I.mela:jour: #:chl.I.mela:who: #:chl.I.mela:date: #:chl.I.mela:rem:LOCUS IMU24585 1452 bp DNA PLN 02-AUG-1995 #:chl.I.mela:rem:DEFINITION Isoetes melanopoda chloroplast 16S rRNA gene, partial sequence. #:chl.I.mela:rem:ACCESSION U24585 #:chl.I.mela:rem:KEYWORDS . #:chl.I.mela:rem:SOURCE Isoetes melanopoda. #:chl.I.mela:rem: ORGANISM Chloroplast Isoetes melanopoda #:chl.I.mela:rem: Eukaryotae; mitochondrial eukaryotes; eukaryote crown group; #:chl.I.mela:rem: Chlorophyta/Embryophyta group; Charophyta/Embryophyta group; #:chl.I.mela:rem: Embryophyta; Lycopodiophyta; Isoetopsida; Isoetales; Isoetaceae; #:chl.I.mela:rem: Isoetes. #:chl.I.mela:rem:REFERENCE 1 (bases 1 to 1452) #:chl.I.mela:rem: AUTHORS Manhart,J.R. #:chl.I.mela:rem: TITLE Chloroplast 16S rDNA sequences and phylogenetic relationships of #:chl.I.mela:rem: fern allies and ferns #:chl.I.mela:rem: JOURNAL Unpublished (1995) #:chl.I.mela:rem:REFERENCE 2 (bases 1 to 1452) #:chl.I.mela:rem: AUTHORS Manhart,J.R. #:chl.I.mela:rem: TITLE Direct Submission #:chl.I.mela:rem: JOURNAL Submitted (03-APR-1995) James R. Manhart, Biology, Texas A&M #:chl.I.mela:rem: University, Department of Biology, Texas A&M University, College #:chl.I.mela:rem: Station, TX 77843-3258, USA #:chl.I.mela:rem:COMMENT #:chl.I.mela:rem: NCBI gi: 924739 #:chl.I.mela:rem:FEATURES Location/Qualifiers #:chl.I.mela:rem: source 1..1452 #:chl.I.mela:rem: /organism="Isoetes melanopoda" #:chl.I.mela:rem: /chloroplast #:chl.I.mela:rem: rRNA <1..>1452 #:chl.I.mela:rem: /product="16S rRNA" #:chl.I.mela:rem:BASE COUNT 363 a 362 c 474 g 253 t #:chl.I.mela:rem:ORIGIN #:chl.S.apod:name:Selaginella apoda #:chl.S.apod:subsp: #:chl.S.apod:strain: #:chl.S.apod:atcc: #:chl.S.apod:acs:U24591 #:chl.S.apod:auth: #:chl.S.apod:title: #:chl.S.apod:jour: #:chl.S.apod:who: #:chl.S.apod:date: #:chl.S.apod:rem:LOCUS SAU24591 1446 bp DNA PLN 02-AUG-1995 #:chl.S.apod:rem:DEFINITION Selaginella apoda chloroplast 16S rRNA gene, partial sequence. #:chl.S.apod:rem:ACCESSION U24591 #:chl.S.apod:rem:KEYWORDS . #:chl.S.apod:rem:SOURCE meadow spike moss. #:chl.S.apod:rem: ORGANISM Chloroplast Selaginella apoda #:chl.S.apod:rem: Eukaryotae; mitochondrial eukaryotes; eukaryote crown group; #:chl.S.apod:rem: Chlorophyta/Embryophyta group; Charophyta/Embryophyta group; #:chl.S.apod:rem: Embryophyta; Lycopodiophyta; Isoetopsida; Selaginellales; #:chl.S.apod:rem: Selaginellaceae; Selaginella. #:chl.S.apod:rem:REFERENCE 1 (bases 1 to 1446) #:chl.S.apod:rem: AUTHORS Manhart,J.R. #:chl.S.apod:rem: TITLE Chloroplast 16S rDNA sequences and phylogenetic relationships of #:chl.S.apod:rem: fern allies and ferns #:chl.S.apod:rem: JOURNAL Unpublished (1995) #:chl.S.apod:rem:REFERENCE 2 (bases 1 to 1446) #:chl.S.apod:rem: AUTHORS Manhart,J.R. #:chl.S.apod:rem: TITLE Direct Submission #:chl.S.apod:rem: JOURNAL Submitted (03-APR-1995) James R. Manhart, Biology, Texas A&M #:chl.S.apod:rem: University, Department of Biology, Texas A&M University, College #:chl.S.apod:rem: Station, TX 77843-3258, USA #:chl.S.apod:rem:COMMENT #:chl.S.apod:rem: NCBI gi: 924746 #:chl.S.apod:rem:FEATURES Location/Qualifiers #:chl.S.apod:rem: source 1..1446 #:chl.S.apod:rem: /organism="Selaginella apoda" #:chl.S.apod:rem: /chloroplast #:chl.S.apod:rem: rRNA <1..>1446 #:chl.S.apod:rem: /product="16S rRNA" #:chl.S.apod:rem:BASE COUNT 342 a 381 c 483 g 240 t #:chl.S.apod:rem:ORIGIN #:chl.L.digi:name:Lycopodium digitatum #:chl.L.digi:subsp: #:chl.L.digi:strain: #:chl.L.digi:atcc: #:chl.L.digi:acs:U24587 #:chl.L.digi:auth: #:chl.L.digi:title: #:chl.L.digi:jour: #:chl.L.digi:who: #:chl.L.digi:date: #:chl.L.digi:rem:LOCUS LDU24587 1456 bp DNA PLN 02-AUG-1995 #:chl.L.digi:rem:DEFINITION Lycopodium digitatum chloroplast 16S rRNA gene, partial sequence. #:chl.L.digi:rem:ACCESSION U24587 #:chl.L.digi:rem:KEYWORDS . #:chl.L.digi:rem:SOURCE Lycopodium digitatum. #:chl.L.digi:rem: ORGANISM Chloroplast Lycopodium digitatum #:chl.L.digi:rem: Eukaryotae; mitochondrial eukaryotes; eukaryote crown group; #:chl.L.digi:rem: Chlorophyta/Embryophyta group; Charophyta/Embryophyta group; #:chl.L.digi:rem: Embryophyta; Lycopodiophyta; Lycopodiopsida; Lycopodiales; #:chl.L.digi:rem: Lycopodiaceae; Lycopodium. #:chl.L.digi:rem:REFERENCE 1 (bases 1 to 1456) #:chl.L.digi:rem: AUTHORS Manhart,J.R. #:chl.L.digi:rem: TITLE Chloroplast 16S rDNA sequences and phylogenetic relationships of #:chl.L.digi:rem: fern allies and ferns #:chl.L.digi:rem: JOURNAL Unpublished (1995) #:chl.L.digi:rem:REFERENCE 2 (bases 1 to 1456) #:chl.L.digi:rem: AUTHORS Manhart,J.R. #:chl.L.digi:rem: TITLE Direct Submission #:chl.L.digi:rem: JOURNAL Submitted (03-APR-1995) James R. Manhart, Biology, Texas A&M #:chl.L.digi:rem: University, Department of Biology, Texas A&M University, College #:chl.L.digi:rem: Station, TX 77843-3258, USA #:chl.L.digi:rem:COMMENT #:chl.L.digi:rem: NCBI gi: 924741 #:chl.L.digi:rem:FEATURES Location/Qualifiers #:chl.L.digi:rem: source 1..1456 #:chl.L.digi:rem: /organism="Lycopodium digitatum" #:chl.L.digi:rem: /chloroplast #:chl.L.digi:rem: rRNA <1..>1456 #:chl.L.digi:rem: /product="16S rRNA" #:chl.L.digi:rem:BASE COUNT 366 a 355 c 467 g 268 t #:chl.L.digi:rem:ORIGIN #:chl.E.arve:name:Equisetum arvense #:chl.E.arve:subsp: #:chl.E.arve:strain: #:chl.E.arve:atcc: #:chl.E.arve:acs:U24593 #:chl.E.arve:auth: #:chl.E.arve:title: #:chl.E.arve:jour: #:chl.E.arve:who: #:chl.E.arve:date: #:chl.E.arve:rem:LOCUS EAU24593 1443 bp DNA PLN 02-AUG-1995 #:chl.E.arve:rem:DEFINITION Equisetum arvense chloroplast 16S rRNA gene, partial sequence. #:chl.E.arve:rem:ACCESSION U24593 #:chl.E.arve:rem:KEYWORDS . #:chl.E.arve:rem:SOURCE field horsetail. #:chl.E.arve:rem: ORGANISM Chloroplast Equisetum arvense #:chl.E.arve:rem: Eukaryotae; mitochondrial eukaryotes; eukaryote crown group; #:chl.E.arve:rem: Chlorophyta/Embryophyta group; Charophyta/Embryophyta group; #:chl.E.arve:rem: Embryophyta; Equisetophyta; Sphenopsida; Equisetales; Equisetaceae; #:chl.E.arve:rem: Equisetum. #:chl.E.arve:rem:REFERENCE 1 (bases 1 to 1443) #:chl.E.arve:rem: AUTHORS Manhart,J.R. #:chl.E.arve:rem: TITLE Chloroplast 16S rDNA sequences and phylogenetic relationships of #:chl.E.arve:rem: fern allies and ferns #:chl.E.arve:rem: JOURNAL Unpublished (1995) #:chl.E.arve:rem:REFERENCE 2 (bases 1 to 1443) #:chl.E.arve:rem: AUTHORS Manhart,J.R. #:chl.E.arve:rem: TITLE Direct Submission #:chl.E.arve:rem: JOURNAL Submitted (03-APR-1995) James R. Manhart, Biology, Texas A&M #:chl.E.arve:rem: University, Department of Biology, Texas A&M University, College #:chl.E.arve:rem: Station, TX 77843-3258, USA #:chl.E.arve:rem:COMMENT #:chl.E.arve:rem: NCBI gi: 924737 #:chl.E.arve:rem:FEATURES Location/Qualifiers #:chl.E.arve:rem: source 1..1443 #:chl.E.arve:rem: /organism="Equisetum arvense" #:chl.E.arve:rem: /chloroplast #:chl.E.arve:rem: rRNA <1..>1443 #:chl.E.arve:rem: /product="16S rRNA" #:chl.E.arve:rem:BASE COUNT 362 a 348 c 466 g 267 t #:chl.E.arve:rem:ORIGIN #:chl.D.maxi:name:Doodia maxima #:chl.D.maxi:subsp: #:chl.D.maxi:strain: #:chl.D.maxi:atcc: #:chl.D.maxi:acs:U24583 #:chl.D.maxi:auth: #:chl.D.maxi:title: #:chl.D.maxi:jour: #:chl.D.maxi:who: #:chl.D.maxi:date: #:chl.D.maxi:rem:LOCUS DMU24583 1425 bp DNA PLN 02-AUG-1995 #:chl.D.maxi:rem:DEFINITION Doodia maxima chloroplast 16S rRNA gene, partial sequence. #:chl.D.maxi:rem:ACCESSION U24583 #:chl.D.maxi:rem:KEYWORDS . #:chl.D.maxi:rem:SOURCE Doodia maxima. #:chl.D.maxi:rem: ORGANISM Chloroplast Doodia maxima #:chl.D.maxi:rem: Eukaryotae; mitochondrial eukaryotes; eukaryote crown group; #:chl.D.maxi:rem: Chlorophyta/Embryophyta group; Charophyta/Embryophyta group; #:chl.D.maxi:rem: Embryophyta; Filicophyta; Filicopsida; Filicales; Blechnaceae; #:chl.D.maxi:rem: Doodia. #:chl.D.maxi:rem:REFERENCE 1 (bases 1 to 1425) #:chl.D.maxi:rem: AUTHORS Manhart,J.R. #:chl.D.maxi:rem: TITLE Chloroplast 16S rDNA sequences and phylogenetic relationships of #:chl.D.maxi:rem: fern allies and ferns #:chl.D.maxi:rem: JOURNAL Unpublished (1995) #:chl.D.maxi:rem:REFERENCE 2 (bases 1 to 1425) #:chl.D.maxi:rem: AUTHORS Manhart,J.R. #:chl.D.maxi:rem: TITLE Direct Submission #:chl.D.maxi:rem: JOURNAL Submitted (03-APR-1995) James R. Manhart, Biology, Texas A&M #:chl.D.maxi:rem: University, Department of Biology, Texas A&M University, College #:chl.D.maxi:rem: Station, TX 77843-3258, USA #:chl.D.maxi:rem:COMMENT #:chl.D.maxi:rem: NCBI gi: 924736 #:chl.D.maxi:rem:FEATURES Location/Qualifiers #:chl.D.maxi:rem: source 1..1425 #:chl.D.maxi:rem: /organism="Doodia maxima" #:chl.D.maxi:rem: /chloroplast #:chl.D.maxi:rem: rRNA <1..>1425 #:chl.D.maxi:rem: /product="16S rRNA" #:chl.D.maxi:rem:BASE COUNT 359 a 352 c 458 g 256 t #:chl.D.maxi:rem:ORIGIN #:chl.P.aqui:name:Chloroplast Pteridium aquilinum. #:chl.P.aqui:subsp: #:chl.P.aqui:strain: #:chl.P.aqui:atcc: #:chl.P.aqui:acs:Z81323 #:chl.P.aqui:auth:Hess,W., Breznovits,A. and Boerner,T. #:chl.P.aqui:title:aquilinum #:chl.P.aqui:jour:Unpublished #:chl.P.aqui:who: #:chl.P.aqui:date:25-OCT-1996 #:chl.P.aqui:title:Chloroplast genes of the fern Pteridium aquilinum cv. #:chl.P.aqui:rem:ref:1 (bases 1 to 1372) #:chl.P.aqui:rem:ref:2 (bases 1 to 1372) #:chl.P.aqui:rem:auth:Hess,W. #:chl.P.aqui:rem:jour:Submitted (24-OCT-1996) Hess W., Humboldt-University, #:chl.P.aqui:rem:: Biology, Chausseesstr. 117, Berlin, GERMANY, D-10115 #:chl.P.aqui:rem:title:Direct Submission #:chl.P.aqui:rem:KEYWORDS:16S ribosomal RNA; 16S rRNA gene. #:chl.P.aqui:rem:GenBank ACCESSION:Z81323 #:chl.C.glau:name:Cibotium glaucum #:chl.C.glau:subsp: #:chl.C.glau:strain: #:chl.C.glau:atcc: #:chl.C.glau:acs:U24582 #:chl.C.glau:auth: #:chl.C.glau:title: #:chl.C.glau:jour: #:chl.C.glau:who: #:chl.C.glau:date: #:chl.C.glau:rem:LOCUS CGU24582 1425 bp DNA PLN 02-AUG-1995 #:chl.C.glau:rem:DEFINITION Cibotium glaucum chloroplast 16S rRNA gene, partial sequence. #:chl.C.glau:rem:ACCESSION U24582 #:chl.C.glau:rem:KEYWORDS . #:chl.C.glau:rem:SOURCE Cibotium glaucum. #:chl.C.glau:rem: ORGANISM Chloroplast Cibotium glaucum #:chl.C.glau:rem: Eukaryotae; mitochondrial eukaryotes; eukaryote crown group; #:chl.C.glau:rem: Chlorophyta/Embryophyta group; Charophyta/Embryophyta group; #:chl.C.glau:rem: Embryophyta; Filicophyta; Filicopsida; Filicales; Dicksoniaceae; #:chl.C.glau:rem: Cibotium. #:chl.C.glau:rem:REFERENCE 1 (bases 1 to 1425) #:chl.C.glau:rem: AUTHORS Manhart,J.R. #:chl.C.glau:rem: TITLE Chloroplast 16S rDNA sequences and phylogenetic relationships of #:chl.C.glau:rem: fern allies and ferns #:chl.C.glau:rem: JOURNAL Unpublished (1995) #:chl.C.glau:rem:REFERENCE 2 (bases 1 to 1425) #:chl.C.glau:rem: AUTHORS Manhart,J.R. #:chl.C.glau:rem: TITLE Direct Submission #:chl.C.glau:rem: JOURNAL Submitted (03-APR-1995) James R. Manhart, Biology, Texas A&M #:chl.C.glau:rem: University, Department of Biology, Texas A&M University, College #:chl.C.glau:rem: Station, TX 77843-3258, USA #:chl.C.glau:rem:COMMENT #:chl.C.glau:rem: NCBI gi: 924734 #:chl.C.glau:rem:FEATURES Location/Qualifiers #:chl.C.glau:rem: source 1..1425 #:chl.C.glau:rem: /organism="Cibotium glaucum" #:chl.C.glau:rem: /chloroplast #:chl.C.glau:rem: rRNA <1..>1425 #:chl.C.glau:rem: /product="16S rRNA" #:chl.C.glau:rem:BASE COUNT 355 a 348 c 463 g 259 t #:chl.C.glau:rem:ORIGIN #:chl.O.cinn:name:Osmunda cinnamomea #:chl.O.cinn:subsp: #:chl.O.cinn:strain: #:chl.O.cinn:atcc: #:chl.O.cinn:acs:U24594 #:chl.O.cinn:auth: #:chl.O.cinn:title: #:chl.O.cinn:jour: #:chl.O.cinn:who: #:chl.O.cinn:date: #:chl.O.cinn:rem:LOCUS OCU24594 1425 bp DNA PLN 02-AUG-1995 #:chl.O.cinn:rem:DEFINITION Osmunda cinnamomea var. fokiensis chloroplast 16S rRNA gene, #:chl.O.cinn:rem: partial sequence. #:chl.O.cinn:rem:ACCESSION U24594 #:chl.O.cinn:rem:KEYWORDS . #:chl.O.cinn:rem:SOURCE Osmunda cinnamomea var. fokiensis. #:chl.O.cinn:rem: ORGANISM Chloroplast Osmunda cinnamomea var. fokiensis #:chl.O.cinn:rem: Eukaryotae; mitochondrial eukaryotes; eukaryote crown group; #:chl.O.cinn:rem: Chlorophyta/Embryophyta group; Charophyta/Embryophyta group; #:chl.O.cinn:rem: Embryophyta; Filicophyta; Filicopsida; Filicales; Osmundaceae; #:chl.O.cinn:rem: Osmunda. #:chl.O.cinn:rem:REFERENCE 1 (bases 1 to 1425) #:chl.O.cinn:rem: AUTHORS Manhart,J.R. #:chl.O.cinn:rem: TITLE Chloroplast 16S rDNA sequences and phylogenetic relationships of #:chl.O.cinn:rem: fern allies and ferns #:chl.O.cinn:rem: JOURNAL Unpublished (1995) #:chl.O.cinn:rem:REFERENCE 2 (bases 1 to 1425) #:chl.O.cinn:rem: AUTHORS Manhart,J.R. #:chl.O.cinn:rem: TITLE Direct Submission #:chl.O.cinn:rem: JOURNAL Submitted (03-APR-1995) James R. Manhart, Biology, Texas A&M #:chl.O.cinn:rem: University, Department of Biology, Texas A&M University, College #:chl.O.cinn:rem: Station, TX 77843-3258, USA #:chl.O.cinn:rem:COMMENT #:chl.O.cinn:rem: NCBI gi: 924743 #:chl.O.cinn:rem:FEATURES Location/Qualifiers #:chl.O.cinn:rem: source 1..1425 #:chl.O.cinn:rem: /organism="Osmunda cinnamomea var. fokiensis" #:chl.O.cinn:rem: /chloroplast #:chl.O.cinn:rem: rRNA <1..>1425 #:chl.O.cinn:rem: /product="16S rRNA" #:chl.O.cinn:rem:BASE COUNT 354 a 347 c 463 g 261 t #:chl.O.cinn:rem:ORIGIN #:chl.L.japo:name:Lygodium japonicum #:chl.L.japo:subsp: #:chl.L.japo:strain: #:chl.L.japo:atcc: #:chl.L.japo:acs:U24588 #:chl.L.japo:auth: #:chl.L.japo:title: #:chl.L.japo:jour: #:chl.L.japo:who: #:chl.L.japo:date: #:chl.L.japo:rem:LOCUS LJU24588 1437 bp DNA PLN 02-AUG-1995 #:chl.L.japo:rem:DEFINITION Lygodium japonicum chloroplast 16S rRNA gene, partial sequence. #:chl.L.japo:rem:ACCESSION U24588 #:chl.L.japo:rem:KEYWORDS . #:chl.L.japo:rem:SOURCE Lygodium japonicum. #:chl.L.japo:rem: ORGANISM Chloroplast Lygodium japonicum #:chl.L.japo:rem: Eukaryotae; mitochondrial eukaryotes; eukaryote crown group; #:chl.L.japo:rem: Chlorophyta/Embryophyta group; Charophyta/Embryophyta group; #:chl.L.japo:rem: Embryophyta; Filicophyta; Filicopsida; Filicales; Schizaeaceae; #:chl.L.japo:rem: Lygodium. #:chl.L.japo:rem:REFERENCE 1 (bases 1 to 1437) #:chl.L.japo:rem: AUTHORS Manhart,J.R. #:chl.L.japo:rem: TITLE Chloroplast 16S rDNA sequences and phylogenetic relationships of #:chl.L.japo:rem: fern allies and ferns #:chl.L.japo:rem: JOURNAL Unpublished (1995) #:chl.L.japo:rem:REFERENCE 2 (bases 1 to 1437) #:chl.L.japo:rem: AUTHORS Manhart,J.R. #:chl.L.japo:rem: TITLE Direct Submission #:chl.L.japo:rem: JOURNAL Submitted (03-APR-1995) James R. Manhart, Biology, Texas A&M #:chl.L.japo:rem: University, Department of Biology, Texas A&M University, College #:chl.L.japo:rem: Station, TX 77843-3258, USA #:chl.L.japo:rem:COMMENT #:chl.L.japo:rem: NCBI gi: 924742 #:chl.L.japo:rem:FEATURES Location/Qualifiers #:chl.L.japo:rem: source 1..1437 #:chl.L.japo:rem: /organism="Lygodium japonicum" #:chl.L.japo:rem: /chloroplast #:chl.L.japo:rem: rRNA <1..>1437 #:chl.L.japo:rem: /product="16S rRNA" #:chl.L.japo:rem:BASE COUNT 361 a 347 c 461 g 268 t #:chl.L.japo:rem:ORIGIN #:chl.A.evec:name:Angiopteris evecta #:chl.A.evec:subsp: #:chl.A.evec:strain: #:chl.A.evec:atcc: #:chl.A.evec:acs:U24580 #:chl.A.evec:auth: #:chl.A.evec:title: #:chl.A.evec:jour: #:chl.A.evec:who: #:chl.A.evec:date: #:chl.A.evec:rem:LOCUS AEU24580 1447 bp DNA PLN 02-AUG-1995 #:chl.A.evec:rem:DEFINITION Angiopteris evecta chloroplast 16S rRNA gene, partial sequence. #:chl.A.evec:rem:ACCESSION U24580 #:chl.A.evec:rem:KEYWORDS . #:chl.A.evec:rem:SOURCE Angiopteris evecta. #:chl.A.evec:rem: ORGANISM Chloroplast Angiopteris evecta #:chl.A.evec:rem: Eukaryotae; mitochondrial eukaryotes; eukaryote crown group; #:chl.A.evec:rem: Chlorophyta/Embryophyta group; Charophyta/Embryophyta group; #:chl.A.evec:rem: Embryophyta; Filicophyta; Filicopsida; Marattiales; Marattiaceae; #:chl.A.evec:rem: Angiopteris. #:chl.A.evec:rem:REFERENCE 1 (bases 1 to 1447) #:chl.A.evec:rem: AUTHORS Manhart,J.R. #:chl.A.evec:rem: TITLE Chloroplast 16S rDNA sequences and phylogenetic relationships of #:chl.A.evec:rem: fern allies and ferns #:chl.A.evec:rem: JOURNAL Unpublished (1995) #:chl.A.evec:rem:REFERENCE 2 (bases 1 to 1447) #:chl.A.evec:rem: AUTHORS Manhart,J.R. #:chl.A.evec:rem: TITLE Direct Submission #:chl.A.evec:rem: JOURNAL Submitted (03-APR-1995) James R. Manhart, Biology, Texas A&M #:chl.A.evec:rem: University, Department of Biology, Texas A&M University, College #:chl.A.evec:rem: Station, TX 77843-3258, USA #:chl.A.evec:rem:COMMENT #:chl.A.evec:rem: NCBI gi: 924732 #:chl.A.evec:rem:FEATURES Location/Qualifiers #:chl.A.evec:rem: source 1..1447 #:chl.A.evec:rem: /organism="Angiopteris evecta" #:chl.A.evec:rem: /chloroplast #:chl.A.evec:rem: rRNA <1..>1447 #:chl.A.evec:rem: /product="16S rRNA" #:chl.A.evec:rem:BASE COUNT 364 a 345 c 468 g 270 t #:chl.A.evec:rem:ORIGIN #:chl.B.bite:name:Botrychium biternatum #:chl.B.bite:subsp: #:chl.B.bite:strain: #:chl.B.bite:atcc: #:chl.B.bite:acs:U24581 #:chl.B.bite:auth: #:chl.B.bite:title: #:chl.B.bite:jour: #:chl.B.bite:who: #:chl.B.bite:date: #:chl.B.bite:rem:LOCUS BBU24581 1425 bp DNA PLN 02-AUG-1995 #:chl.B.bite:rem:DEFINITION Botrychium biternatum chloroplast 16S rRNA gene, partial sequence. #:chl.B.bite:rem:ACCESSION U24581 #:chl.B.bite:rem:KEYWORDS . #:chl.B.bite:rem:SOURCE Botrychium biternatum. #:chl.B.bite:rem: ORGANISM Chloroplast Botrychium biternatum #:chl.B.bite:rem: Eukaryotae; mitochondrial eukaryotes; eukaryote crown group; #:chl.B.bite:rem: Chlorophyta/Embryophyta group; Charophyta/Embryophyta group; #:chl.B.bite:rem: Embryophyta; Filicophyta; Ophioglossopsida; Ophioglossales; #:chl.B.bite:rem: Ophioglossaceae; Botrychium. #:chl.B.bite:rem:REFERENCE 1 (bases 1 to 1425) #:chl.B.bite:rem: AUTHORS Manhart,J.R. #:chl.B.bite:rem: TITLE Chloroplast 16S rDNA sequences and phylogenetic relationships of #:chl.B.bite:rem: fern allies and ferns #:chl.B.bite:rem: JOURNAL Unpublished (1995) #:chl.B.bite:rem:REFERENCE 2 (bases 1 to 1425) #:chl.B.bite:rem: AUTHORS Manhart,J.R. #:chl.B.bite:rem: TITLE Direct Submission #:chl.B.bite:rem: JOURNAL Submitted (03-APR-1995) James R. Manhart, Biology, Texas A&M #:chl.B.bite:rem: University, Department of Biology, Texas A&M University, College #:chl.B.bite:rem: Station, TX 77843-3258, USA #:chl.B.bite:rem:COMMENT #:chl.B.bite:rem: NCBI gi: 924733 #:chl.B.bite:rem:FEATURES Location/Qualifiers #:chl.B.bite:rem: source 1..1425 #:chl.B.bite:rem: /organism="Botrychium biternatum" #:chl.B.bite:rem: /chloroplast #:chl.B.bite:rem: rRNA <1..>1425 #:chl.B.bite:rem: /product="16S rRNA" #:chl.B.bite:rem:BASE COUNT 353 a 353 c 465 g 254 t #:chl.B.bite:rem:ORIGIN #:chl.O.enge:name:Ophioglossum engelmannii #:chl.O.enge:subsp: #:chl.O.enge:strain: #:chl.O.enge:atcc: #:chl.O.enge:acs:U24589 #:chl.O.enge:auth: #:chl.O.enge:title: #:chl.O.enge:jour: #:chl.O.enge:who: #:chl.O.enge:date: #:chl.O.enge:rem:LOCUS OEU24589 1425 bp DNA PLN 02-AUG-1995 #:chl.O.enge:rem:DEFINITION Ophioglossum engelmannii chloroplast 16S rRNA gene, partial #:chl.O.enge:rem: sequence. #:chl.O.enge:rem:ACCESSION U24589 #:chl.O.enge:rem:KEYWORDS . #:chl.O.enge:rem:SOURCE Engelmann's adder's-tongue. #:chl.O.enge:rem: ORGANISM Chloroplast Ophioglossum engelmannii #:chl.O.enge:rem: Eukaryotae; mitochondrial eukaryotes; eukaryote crown group; #:chl.O.enge:rem: Chlorophyta/Embryophyta group; Charophyta/Embryophyta group; #:chl.O.enge:rem: Embryophyta; Filicophyta; Ophioglossopsida; Ophioglossales; #:chl.O.enge:rem: Ophioglossaceae; Ophioglossum. #:chl.O.enge:rem:REFERENCE 1 (bases 1 to 1425) #:chl.O.enge:rem: AUTHORS Manhart,J.R. #:chl.O.enge:rem: TITLE Chloroplast 16S rDNA sequences and phylogenetic relationships of #:chl.O.enge:rem: fern allies and ferns #:chl.O.enge:rem: JOURNAL Unpublished (1995) #:chl.O.enge:rem:REFERENCE 2 (bases 1 to 1425) #:chl.O.enge:rem: AUTHORS Manhart,J.R. #:chl.O.enge:rem: TITLE Direct Submission #:chl.O.enge:rem: JOURNAL Submitted (03-APR-1995) James R. Manhart, Biology, Texas A&M #:chl.O.enge:rem: University, Department of Biology, Texas A&M University, College #:chl.O.enge:rem: Station, TX 77843-3258, USA #:chl.O.enge:rem:COMMENT #:chl.O.enge:rem: NCBI gi: 924744 #:chl.O.enge:rem:FEATURES Location/Qualifiers #:chl.O.enge:rem: source 1..1425 #:chl.O.enge:rem: /organism="Ophioglossum engelmannii" #:chl.O.enge:rem: /chloroplast #:chl.O.enge:rem: rRNA <1..>1425 #:chl.O.enge:rem: /product="16S rRNA" #:chl.O.enge:rem:BASE COUNT 352 a 353 c 464 g 256 t #:chl.O.enge:rem:ORIGIN #:chl.P.nudu:name:Psilotum nudum #:chl.P.nudu:subsp: #:chl.P.nudu:strain: #:chl.P.nudu:atcc: #:chl.P.nudu:acs:U24590 #:chl.P.nudu:auth: #:chl.P.nudu:title: #:chl.P.nudu:jour: #:chl.P.nudu:who: #:chl.P.nudu:date: #:chl.P.nudu:rem:LOCUS PNU24590 1452 bp DNA PLN 02-AUG-1995 #:chl.P.nudu:rem:DEFINITION Psilotum nudum chloroplast 16S rRNA gene, partial sequence. #:chl.P.nudu:rem:ACCESSION U24590 #:chl.P.nudu:rem:KEYWORDS . #:chl.P.nudu:rem:SOURCE Psilotum nudum. #:chl.P.nudu:rem: ORGANISM Chloroplast Psilotum nudum #:chl.P.nudu:rem: Eukaryotae; mitochondrial eukaryotes; eukaryote crown group; #:chl.P.nudu:rem: Chlorophyta/Embryophyta group; Charophyta/Embryophyta group; #:chl.P.nudu:rem: Embryophyta; Psilotophyta; Psilotopsida; Psilotales; Psilotaceae; #:chl.P.nudu:rem: Psilotum. #:chl.P.nudu:rem:REFERENCE 1 (bases 1 to 1452) #:chl.P.nudu:rem: AUTHORS Manhart,J.R. #:chl.P.nudu:rem: TITLE Chloroplast 16S rDNA sequences and phylogenetic relationships of #:chl.P.nudu:rem: fern allies and ferns #:chl.P.nudu:rem: JOURNAL Unpublished (1995) #:chl.P.nudu:rem:REFERENCE 2 (bases 1 to 1452) #:chl.P.nudu:rem: AUTHORS Manhart,J.R. #:chl.P.nudu:rem: TITLE Direct Submission #:chl.P.nudu:rem: JOURNAL Submitted (03-APR-1995) James R. Manhart, Biology, Texas A&M #:chl.P.nudu:rem: University, Department of Biology, Texas A&M University, College #:chl.P.nudu:rem: Station, TX 77843-3258, USA #:chl.P.nudu:rem:COMMENT #:chl.P.nudu:rem: NCBI gi: 924745 #:chl.P.nudu:rem:FEATURES Location/Qualifiers #:chl.P.nudu:rem: source 1..1452 #:chl.P.nudu:rem: /organism="Psilotum nudum" #:chl.P.nudu:rem: /chloroplast #:chl.P.nudu:rem: rRNA <1..>1452 #:chl.P.nudu:rem: /product="16S rRNA" #:chl.P.nudu:rem:BASE COUNT 375 a 349 c 460 g 268 t #:chl.P.nudu:rem:ORIGIN #:chl.T.obla:name:Tmesipteris oblanceolata #:chl.T.obla:subsp: #:chl.T.obla:strain: #:chl.T.obla:atcc: #:chl.T.obla:acs:U24595 #:chl.T.obla:auth: #:chl.T.obla:title: #:chl.T.obla:jour: #:chl.T.obla:who: #:chl.T.obla:date: #:chl.T.obla:rem:LOCUS TOU24595 1436 bp DNA PLN 02-AUG-1995 #:chl.T.obla:rem:DEFINITION Tmesipteris oblanceolata chloroplast 16S rRNA gene, partial #:chl.T.obla:rem: sequence. #:chl.T.obla:rem:ACCESSION U24595 #:chl.T.obla:rem:KEYWORDS . #:chl.T.obla:rem:SOURCE Tmesipteris oblanceolata. #:chl.T.obla:rem: ORGANISM Chloroplast Tmesipteris oblanceolata #:chl.T.obla:rem: Eukaryotae; mitochondrial eukaryotes; eukaryote crown group; #:chl.T.obla:rem: Chlorophyta/Embryophyta group; Charophyta/Embryophyta group; #:chl.T.obla:rem: Embryophyta; Psilotophyta; Psilotopsida; Psilotales; Psilotaceae; #:chl.T.obla:rem: Tmesipteris. #:chl.T.obla:rem:REFERENCE 1 (bases 1 to 1436) #:chl.T.obla:rem: AUTHORS Manhart,J.R. #:chl.T.obla:rem: TITLE Chloroplast 16S rDNA sequences and phylogenetic relationships of #:chl.T.obla:rem: fern allies and ferns #:chl.T.obla:rem: JOURNAL Unpublished (1995) #:chl.T.obla:rem:REFERENCE 2 (bases 1 to 1436) #:chl.T.obla:rem: AUTHORS Manhart,J.R. #:chl.T.obla:rem: TITLE Direct Submission #:chl.T.obla:rem: JOURNAL Submitted (03-APR-1995) James R. Manhart, Biology, Texas A&M #:chl.T.obla:rem: University, Department of Biology, Texas A&M University, College #:chl.T.obla:rem: Station, TX 77843-3258, USA #:chl.T.obla:rem:COMMENT #:chl.T.obla:rem: NCBI gi: 924749 #:chl.T.obla:rem:FEATURES Location/Qualifiers #:chl.T.obla:rem: source 1..1436 #:chl.T.obla:rem: /organism="Tmesipteris oblanceolata" #:chl.T.obla:rem: /chloroplast #:chl.T.obla:rem: rRNA <1..>1436 #:chl.T.obla:rem: /product="16S rRNA" #:chl.T.obla:rem:BASE COUNT 376 a 345 c 448 g 267 t #:chl.T.obla:rem:ORIGIN #:chl.J.virg:name:Juniperus virginiana #:chl.J.virg:subsp: #:chl.J.virg:strain: #:chl.J.virg:atcc: #:chl.J.virg:acs:U24586 #:chl.J.virg:auth: #:chl.J.virg:title: #:chl.J.virg:jour: #:chl.J.virg:who: #:chl.J.virg:date: #:chl.J.virg:rem:LOCUS JVU24586 1454 bp DNA PLN 02-AUG-1995 #:chl.J.virg:rem:DEFINITION Juniperus virginiana chloroplast 16S rRNA gene, partial sequence. #:chl.J.virg:rem:ACCESSION U24586 #:chl.J.virg:rem:KEYWORDS . #:chl.J.virg:rem:SOURCE red cedar. #:chl.J.virg:rem: ORGANISM Chloroplast Juniperus virginiana #:chl.J.virg:rem: Eukaryotae; mitochondrial eukaryotes; eukaryote crown group; #:chl.J.virg:rem: Chlorophyta/Embryophyta group; Charophyta/Embryophyta group; #:chl.J.virg:rem: Embryophyta; Pinophyta; Coniferopsida; Coniferales; Cupressaceae; #:chl.J.virg:rem: Juniperus. #:chl.J.virg:rem:REFERENCE 1 (bases 1 to 1454) #:chl.J.virg:rem: AUTHORS Manhart,J.R. #:chl.J.virg:rem: TITLE Chloroplast 16S rDNA sequences and phylogenetic relationships of #:chl.J.virg:rem: fern allies and ferns #:chl.J.virg:rem: JOURNAL Unpublished (1995) #:chl.J.virg:rem:REFERENCE 2 (bases 1 to 1454) #:chl.J.virg:rem: AUTHORS Manhart,J.R. #:chl.J.virg:rem: TITLE Direct Submission #:chl.J.virg:rem: JOURNAL Submitted (03-APR-1995) James R. Manhart, Biology, Texas A&M #:chl.J.virg:rem: University, Department of Biology, Texas A&M University, College #:chl.J.virg:rem: Station, TX 77843-3258, USA #:chl.J.virg:rem:COMMENT #:chl.J.virg:rem: NCBI gi: 924740 #:chl.J.virg:rem:FEATURES Location/Qualifiers #:chl.J.virg:rem: source 1..1454 #:chl.J.virg:rem: /organism="Juniperus virginiana" #:chl.J.virg:rem: /chloroplast #:chl.J.virg:rem: rRNA <1..>1454 #:chl.J.virg:rem: /product="16S rRNA" #:chl.J.virg:rem:BASE COUNT 387 a 327 c 446 g 294 t #:chl.J.virg:rem:ORIGIN #:chl.P.thun:name:Chloroplast Pinus thunbergii #:chl.P.thun:subsp: #:chl.P.thun:strain: #:chl.P.thun:atcc: #:chl.P.thun:acs:D17510 #:chl.P.thun:auth: #:chl.P.thun:title: #:chl.P.thun:jour: #:chl.P.thun:who: #:chl.P.thun:date: #:chl.P.thun:rem:LOCUS PINCPTRPG 119707 bp ds-DNA PLN 13-AUG-1994 #:chl.P.thun:rem:DEFINITION Complete sequence of black pine (Pinus thunbergii) chloroplast DNA. #:chl.P.thun:rem:ACCESSION D17510 #:chl.P.thun:rem:KEYWORDS 16S ribosomal RNA; 23S ribosomal RNA; 4.5S ribosomal RNA; #:chl.P.thun:rem: 5S ribosomal RNA; H+ - K+ ATPase beta subunit; #:chl.P.thun:rem: RNA polymerase alpha-subunit; RNA polymerase beta subunit; #:chl.P.thun:rem: RNA polymerase beta' subunit; RNA polymerase beta-2 subunit; #:chl.P.thun:rem: RubisCO large subunit; cytochrome B6; cytochrome f; #:chl.P.thun:rem: initiation factor; maturase; protochlorophyllide reductase; #:chl.P.thun:rem: ribosomal protein L14; ribosomal protein L16; #:chl.P.thun:rem: ribosomal protein L20; ribosomal protein L22; #:chl.P.thun:rem: ribosomal protein L23; ribosomal protein L32; #:chl.P.thun:rem: ribosomal protein L33; ribosomal protein L36; #:chl.P.thun:rem: ribosomal protein S11; ribosomal protein S12; #:chl.P.thun:rem: ribosomal protein S14; ribosomal protein S15; #:chl.P.thun:rem: ribosomal protein S18; ribosomal protein S19; #:chl.P.thun:rem: ribosomal protein S2; ribosomal protein S3; ribosomal protein S4; #:chl.P.thun:rem: ribosomal protein S7; ribosomal protein S8. #:chl.P.thun:rem:SOURCE Chloroplast Pinus thunbergii (organelle Chloroplast Pinus #:chl.P.thun:rem: thunbergii) DNA. #:chl.P.thun:rem: ORGANISM Chloroplast Pinus thunbergii #:chl.P.thun:rem: Eukaryota; Plantae; Embryobionta; Pinophyta; Pinicae; Pinatae; #:chl.P.thun:rem: Pinaceae. #:chl.P.thun:rem:REFERENCE 1 (sites) #:chl.P.thun:rem: AUTHORS Tsudzuki,J., Nakashima,K., Tsudzuki,T., Hiratsuka,J., Shibata,M., #:chl.P.thun:rem: Wakasugi,T. and Sugiura,M. #:chl.P.thun:rem: TITLE Chloroplast DNA of black pine retains a residual inverted repeat #:chl.P.thun:rem: lacking rRNA genes: nucleotide sequences of trnQ, trnK, psbA, trnI #:chl.P.thun:rem: and trnH and the absence of rps16 #:chl.P.thun:rem: JOURNAL Mol. Gen. Genet. 232, 206-214 (1993) #:chl.P.thun:rem: STANDARD full automatic #:chl.P.thun:rem:REFERENCE 2 (sites) #:chl.P.thun:rem: AUTHORS Wakasugi,T., Tsudzuki,J., Ito,S., Nakashima,K., Tsudzuki,T. and #:chl.P.thun:rem: Sugiura,M. #:chl.P.thun:rem: TITLE Loss of ndh genes as revealed by sequencing the entire chloroplast #:chl.P.thun:rem: genome of black pine, Pinus thunbergii #:chl.P.thun:rem: JOURNAL Unpublished (1994) #:chl.P.thun:rem: STANDARD full automatic #:chl.P.thun:rem:REFERENCE 3 (bases 1 to 119707) #:chl.P.thun:rem: AUTHORS Tsudzuki,J., Ito,S., Tsudzuki,T., Wakasugi,T. and Sugiura,M. #:chl.P.thun:rem: TITLE A new gene encoding tRNA pro (GGG) is present in the chloroplast #:chl.P.thun:rem: genome of black pine: a compilation of 32 tRNA genes from black #:chl.P.thun:rem: pine chloroplasts #:chl.P.thun:rem: JOURNAL Curr. Genet. 26, 153-158 (1994) #:chl.P.thun:rem: STANDARD full automatic #:chl.P.thun:rem:COMMENT #:chl.P.thun:rem: Submitted (27-Aug-1993) to DDBJ by: Masahiro Sugiura #:chl.P.thun:rem: Center for Gene Reseach #:chl.P.thun:rem: Nagoya University #:chl.P.thun:rem: Chikusa-ku, Nagoya 464-01 #:chl.P.thun:rem: Japan #:chl.P.thun:rem: Phone: 052-781-5111 x3448 #:chl.P.thun:rem: Fax: 052-782-3849. #:chl.P.thun:rem: NCBI gi: 529643 #:chl.P.thun:rem:FEATURES Location/Qualifiers #:chl.P.thun:rem: source 1..119707 #:chl.P.thun:rem: /organism="Chloroplast Pinus thunbergii" #:chl.P.thun:rem: /chloroplast #:chl.P.thun:rem: /sequenced_mol="DNA" #:chl.P.thun:rem:BASE COUNT 36668 a 23069 c 23013 g 36957 t #:chl.P.thun:rem:ORIGIN #:chl.E.trif:name:Ephedra trifurca #:chl.E.trif:subsp: #:chl.E.trif:strain: #:chl.E.trif:atcc: #:chl.E.trif:acs:U24584 #:chl.E.trif:auth: #:chl.E.trif:title: #:chl.E.trif:jour: #:chl.E.trif:who: #:chl.E.trif:date: #:chl.E.trif:rem:LOCUS ETU24584 1428 bp DNA PLN 02-AUG-1995 #:chl.E.trif:rem:DEFINITION Ephedra trifurca chloroplast 16S rRNA gene, partial sequence. #:chl.E.trif:rem:ACCESSION U24584 #:chl.E.trif:rem:KEYWORDS . #:chl.E.trif:rem:SOURCE Ephedra trifurca. #:chl.E.trif:rem: ORGANISM Chloroplast Ephedra trifurca #:chl.E.trif:rem: Eukaryotae; mitochondrial eukaryotes; eukaryote crown group; #:chl.E.trif:rem: Chlorophyta/Embryophyta group; Charophyta/Embryophyta group; #:chl.E.trif:rem: Embryophyta; Pinophyta; Gnetopsida; Ephedrales; Ephedraceae; #:chl.E.trif:rem: Ephedra. #:chl.E.trif:rem:REFERENCE 1 (bases 1 to 1428) #:chl.E.trif:rem: AUTHORS Manhart,J.R. #:chl.E.trif:rem: TITLE Chloroplast 16S rDNA sequences and phylogenetic relationships of #:chl.E.trif:rem: fern allies and ferns #:chl.E.trif:rem: JOURNAL Unpublished (1995) #:chl.E.trif:rem:REFERENCE 2 (bases 1 to 1428) #:chl.E.trif:rem: AUTHORS Manhart,J.R. #:chl.E.trif:rem: TITLE Direct Submission #:chl.E.trif:rem: JOURNAL Submitted (03-APR-1995) James R. Manhart, Biology, Texas A&M #:chl.E.trif:rem: University, Department of Biology, Texas A&M University, College #:chl.E.trif:rem: Station, TX 77843-3258, USA #:chl.E.trif:rem:COMMENT #:chl.E.trif:rem: NCBI gi: 924738 #:chl.E.trif:rem:FEATURES Location/Qualifiers #:chl.E.trif:rem: source 1..1428 #:chl.E.trif:rem: /organism="Ephedra trifurca" #:chl.E.trif:rem: /chloroplast #:chl.E.trif:rem: rRNA <1..>1428 #:chl.E.trif:rem: /product="16S rRNA" #:chl.E.trif:rem:BASE COUNT 371 a 322 c 446 g 289 t #:chl.E.trif:rem:ORIGIN #:chl.O.sati:name:Oryza sativa #:chl.O.sati:subsp: #:chl.O.sati:strain: #:chl.O.sati:atcc: #:chl.O.sati:acs:X15901 #:chl.O.sati:auth: #:chl.O.sati:title: #:chl.O.sati:jour: #:chl.O.sati:who: #:chl.O.sati:date: #:chl.O.sati:rem:X15901; #:chl.O.sati:rem:Mol. Gen. Genet. 217:185-194(1989). #:chl.Z.ma.1:name:chloroplast,Zea mays(maize) #:chl.Z.ma.1:subsp: #:chl.Z.ma.1:strain: #:chl.Z.ma.1:atcc:???? #:chl.Z.ma.1:acs:Z00028 #:chl.Z.ma.1:auth: #:chl.Z.ma.1:title: #:chl.Z.ma.1:jour:***FINISH*** Nature 283:739(1980) #:chl.Z.ma.1:who:published #:chl.Z.ma.1:date:Jan.23 1981 #:chl.Z.ma.1:rem:Phylo:Eubacteria,Cyanobacteria,chloroplast #:chl.Z.ma.2:name:Chloroplast Zea mays. #:chl.Z.ma.2:subsp: #:chl.Z.ma.2:strain: #:chl.Z.ma.2:atcc: #:chl.Z.ma.2:acs:X86563 #:chl.Z.ma.2:auth:Maier,R.M., Neckermann,K., Igloi,G.L. and Kossel,H. #:chl.Z.ma.2:title:Complete sequence of the maize chloroplast genome: gene content, #:chl.Z.ma.2:jour:J. Mol. Biol. 251 (5), 614-628 (1995) #:chl.Z.ma.2:who: #:chl.Z.ma.2:date:17-FEB-1997 #:chl.Z.ma.2:title:hotspots of divergence and fine tuning of genetic information #:chl.Z.ma.2:title:by transcript editing #:chl.Z.ma.2:rem:ref:1 (bases 1 to 140387) #:chl.Z.ma.2:rem:ref:2 (bases 1 to 140387) #:chl.Z.ma.2:rem:auth:Neckermann,K. #:chl.Z.ma.2:rem:jour:Submitted (25-APR-1995) K. Neckermann, Institut f. Biologie #:chl.Z.ma.2:rem:: III, Schaenzlestr. 1, D- 79104 Freiburg i.Br., FRG #:chl.Z.ma.2:rem:title:Direct Submission #:chl.Z.ma.2:rem:ref:3 (bases 1 to 140387) #:chl.Z.ma.2:rem:auth:Rodermel,S.R. #:chl.Z.ma.2:rem:jour:Nucleic Acids Res. 20 (21), 5844 (1992) #:chl.Z.ma.2:rem:title:Nucleotide sequence of a maize chloroplast DNA fragment #:chl.Z.ma.2:rem:: containing an inversion breakpoint, trnG (GCC), trnG (UCC), #:chl.Z.ma.2:rem:: trnfM, and a trnG pseudogene #:chl.Z.ma.2:rem:ref:4 (bases 1 to 140387) #:chl.Z.ma.2:rem:auth:Igloi,G.L., Meinke,A., Dory,I. and Kossel,H. #:chl.Z.ma.2:rem:jour:Mol. Gen. Genet. 221 (3), 379-394 (1990) #:chl.Z.ma.2:rem:title:Nucleotide sequence of the maize chloroplast rpo B/C1/C2 #:chl.Z.ma.2:rem:: operon: comparison between the derived protein primary #:chl.Z.ma.2:rem:: structures from various organisms with respect to functional #:chl.Z.ma.2:rem:: domains #:chl.Z.ma.2:rem:ref:5 (bases 1 to 140387) #:chl.Z.ma.2:rem:auth:Fish,L.E., Kuck,U. and Bogorad,L. #:chl.Z.ma.2:rem:jour:J. Biol. Chem. 260 (3), 1413-1421 (1985) #:chl.Z.ma.2:rem:title:Two partially homologous adjacent light-inducible maize #:chl.Z.ma.2:rem:: chloroplast genes encoding polypeptides of the P700 #:chl.Z.ma.2:rem:: chlorophyll a-protein complex of photosystem I #:chl.Z.ma.2:rem:ref:6 (bases 1 to 140387) #:chl.Z.ma.2:rem:auth:Rodermel,S., Orlin,P. and Bogorad,L. #:chl.Z.ma.2:rem:jour:Nucleic Acids Res. 15 (13), 5493 (1987) #:chl.Z.ma.2:rem:title:The transcription termination region between two #:chl.Z.ma.2:rem:: convergently-transcribed photoregulated operons in the maize #:chl.Z.ma.2:rem:: plastid chromosome contains rps14, trnR (UCU) and a putative #:chl.Z.ma.2:rem:: trnfM pseudogene #:chl.Z.ma.2:rem:ref:7 (bases 1 to 140387) #:chl.Z.ma.2:rem:auth:Kangasjarvi,J., McCullough,A. and Gengenbach,B.G. #:chl.Z.ma.2:rem:jour:Plant Mol. Biol. 17 (3), 513-515 (1991) #:chl.Z.ma.2:rem:title:Nucleotide sequence and transcription of maize plastid #:chl.Z.ma.2:rem:: genome Bam HI fragment 14 containing ORF170 #:chl.Z.ma.2:rem:ref:8 (bases 1 to 140387) #:chl.Z.ma.2:rem:auth:Steinmuller,K., Ley,A.C., Steinmetz,A.A., Sayre,R.T. and #:chl.Z.ma.2:rem:: Bogorad,L. #:chl.Z.ma.2:rem:jour:Mol. Gen. Genet. 216 (1), 60-69 (1989) #:chl.Z.ma.2:rem:title:Characterization of the ndhC-psbG-ORF157/159 operon of #:chl.Z.ma.2:rem:: maize plastid DNA and of the cyanobacterium Synechocystis sp. #:chl.Z.ma.2:rem:: PCC6803 #:chl.Z.ma.2:rem:ref:9 (bases 1 to 140387) #:chl.Z.ma.2:rem:auth:Erion,J.L. #:chl.Z.ma.2:rem:jour:Plant Mol. Biol. 4, 169-179 (1985) #:chl.Z.ma.2:rem:title:Characterization of the mRNA transcripts of the maize, #:chl.Z.ma.2:rem:: ribulose-1,5-bisphosphate carboxylase, large subunit gene #:chl.Z.ma.2:rem:ref:10 (bases 1 to 140387) #:chl.Z.ma.2:rem:auth:Bowman,C.M., Barker,R.F. and Dyer,T.A. #:chl.Z.ma.2:rem:jour:Curr. Genet. 14 (2), 127-136 (1988) #:chl.Z.ma.2:rem:title:In wheat ctDNA, segments of ribosomal protein genes are #:chl.Z.ma.2:rem:: dispersed repeats, probably conserved by nonreciprocal #:chl.Z.ma.2:rem:: recombination #:chl.Z.ma.2:rem:ref:11 (bases 1 to 140387) #:chl.Z.ma.2:rem:auth:Weglohner,W. and Subramanian,A.R. #:chl.Z.ma.2:rem:jour:Plant Mol. Biol. 18 (2), 415-418 (1992) #:chl.Z.ma.2:rem:title:Nucleotide sequence of a region of maize chloroplast DNA #:chl.Z.ma.2:rem:: containing the 3' end of clpP, exon 1 of rps12 and rpl20 and #:chl.Z.ma.2:rem:: their cotranscription #:chl.Z.ma.2:rem:ref:12 (bases 1 to 140387) #:chl.Z.ma.2:rem:auth:Lukens,J.H. and Bogorad,L. #:chl.Z.ma.2:rem:jour:Nucleic Acids Res. 16 (11), 5192 (1988) #:chl.Z.ma.2:rem:title:Nucleotide sequence containing the maize chloroplast #:chl.Z.ma.2:rem:: proline (UGG) and tryptophan (CCA) tRNA genes #:chl.Z.ma.2:rem:ref:13 (bases 1 to 140387) #:chl.Z.ma.2:rem:auth:Rock,C.D., Barkan,A. and Taylor,W.C. #:chl.Z.ma.2:rem:jour:Curr. Genet. 12 (1), 69-77 (1987) #:chl.Z.ma.2:rem:title:The maize plastid psbB-psbF-petB-petD gene cluster: #:chl.Z.ma.2:rem:: spliced and unspliced petB and petD RNAs encode alternative #:chl.Z.ma.2:rem:: products #:chl.Z.ma.2:rem:ref:14 (bases 1 to 140387) #:chl.Z.ma.2:rem:auth:Ruf,M. and Kossel,H. #:chl.Z.ma.2:rem:jour:Nucleic Acids Res. 16 (13), 5741-5754 (1988) #:chl.Z.ma.2:rem:title:Structure and expression of the gene coding for the #:chl.Z.ma.2:rem:: alpha-subunit of DNA-dependent RNA polymerase from the #:chl.Z.ma.2:rem:: chloroplast genome of Zea mays #:chl.Z.ma.2:rem:ref:15 (bases 1 to 140387) #:chl.Z.ma.2:rem:auth:Kavousi,M., Giese,K., Larrinua,I.M., McLaughlin,W.E. and #:chl.Z.ma.2:rem:: Subramanian,A.R. #:chl.Z.ma.2:rem:jour:Nucleic Acids Res. 18 (14), 4244 (1990) #:chl.Z.ma.2:rem:title:Nucleotide sequence and map positions of the duplicated #:chl.Z.ma.2:rem:: gene for maize (Zea mays) chloroplast ribosomal protein L2 #:chl.Z.ma.2:rem:ref:16 (bases 1 to 140387) #:chl.Z.ma.2:rem:auth:McLaughlin,W.E. and Larrinua,I.M. #:chl.Z.ma.2:rem:jour:Nucleic Acids Res. 15 (10), 4356 (1987) #:chl.Z.ma.2:rem:title:The sequence of the maize plastid encoded rpl 22 locus #:chl.Z.ma.2:rem:ref:17 (bases 1 to 140387) #:chl.Z.ma.2:rem:auth:Maier,R.M., Neckermann,K., Hoch,B., Akhmedov,N.B. and #:chl.Z.ma.2:rem:: Kossel,H. #:chl.Z.ma.2:rem:jour:Nucleic Acids Res. 20 (23), 6189-6194 (1992) #:chl.Z.ma.2:rem:title:Identification of editing positions in the ndhB transcript #:chl.Z.ma.2:rem:: from maize chloroplasts reveals sequence similarities between #:chl.Z.ma.2:rem:: editing sites of chloroplasts and plant mitochondria #:chl.Z.ma.2:rem:ref:18 (bases 1 to 140387) #:chl.Z.ma.2:rem:auth:Giese,K., Subramanian,A.R., Larrinua,I.M. and Bogorad,L. #:chl.Z.ma.2:rem:jour:J. Biol. Chem. 262 (31), 15251-15255 (1987) #:chl.Z.ma.2:rem:title:Nucleotide sequence, promoter analysis, and linkage #:chl.Z.ma.2:rem:: mapping of the unusually organized operon encoding ribosomal #:chl.Z.ma.2:rem:: proteins S7 and S12 in maize chloroplast #:chl.Z.ma.2:rem:ref:19 (bases 1 to 140387) #:chl.Z.ma.2:rem:auth:Strittmatter,G. and Kossel,H. #:chl.Z.ma.2:rem:jour:Nucleic Acids Res. 12 (20), 7633-7647 (1984) #:chl.Z.ma.2:rem:title:Cotranscription and processing of 23S, 4.5S and 5S rRNA in #:chl.Z.ma.2:rem:: chloroplasts from Zea mays #:chl.Z.ma.2:rem:ref:20 (bases 1 to 140387) #:chl.Z.ma.2:rem:auth:Fitzky,B. and Subramanian,A.R. #:chl.Z.ma.2:rem:jour:Nucleic Acids Res. 18 (11), 3407 (1990) #:chl.Z.ma.2:rem:title:Nucleotide sequence and map positions of the duplicated #:chl.Z.ma.2:rem:: gene for chloroplast ribosomal protein S15 in Zea mays (maize) #:chl.Z.ma.2:rem:ref:21 (bases 1 to 140387) #:chl.Z.ma.2:rem:auth:Weglohner,W. and Subramanian,A.R. #:chl.Z.ma.2:rem:jour:Plant Mol. Biol. 21 (3), 543-548 (1993) #:chl.Z.ma.2:rem:title:Nucleotide sequence of maize chloroplast rpl32: completing #:chl.Z.ma.2:rem:: the apparent set of plastid ribosomal protein genes and their #:chl.Z.ma.2:rem:: tentative operon organization #:chl.Z.ma.2:rem:ref:22 (bases 1 to 140387) #:chl.Z.ma.2:rem:auth:Schantz,R. and Bogorad,L. #:chl.Z.ma.2:rem:jour:Plant Mol. Biol. 11, 239-247 (1988) #:chl.Z.ma.2:rem:title:Maize chloroplast genes ndhD, ndhE, and psaC. Sequences, #:chl.Z.ma.2:rem:: transcripts and transcript pools #:chl.Z.ma.2:rem:KEYWORDS:16S rRNA; 23S rRNA; 4.5S rRNA; 5S rRNA; ATPase; atpE #:chl.Z.ma.2:rem:: gene; atpI gene; cemA gene; clpP gene; cytochrome B6; #:chl.Z.ma.2:rem:: cytochrome bf complex; cytochrome f; infA gene; initiation #:chl.Z.ma.2:rem:: factor 1; junction LSC-IR; matK gene; NADH dehydrogenase; #:chl.Z.ma.2:rem:: ndhB gene; ndhC gene; ndhD gene; ndhF gene; ndhJ gene; ndhK #:chl.Z.ma.2:rem:: gene; petA gene; petB gene; petD gene; petE gene; psaA gene; #:chl.Z.ma.2:rem:: psaB gene; psaI gene; psaJ gene; psbA gene; psbB gene; psbC #:chl.Z.ma.2:rem:: gene; psbD gene; psbF gene; psbH gene; psbI gene; psbJ gene; #:chl.Z.ma.2:rem:: psbK gene; psbN gene; PSI P700 apoprotein A1; PSI P700 #:chl.Z.ma.2:rem:: apoprotein A2; PSII component; PSII cytochrome b559; PSII D2 #:chl.Z.ma.2:rem:: protein; PSII I protein; PSII K protein; PSII L protein; PSII #:chl.Z.ma.2:rem:: protein; rbcL gene; ribosomal protein L14; ribosomal protein #:chl.Z.ma.2:rem:: L16; ribosomal protein L2; ribosomal protein L20; ribosomal #:chl.Z.ma.2:rem:: protein L22; ribosomal protein L23; ribosomal protein L32; #:chl.Z.ma.2:rem:: ribosomal protein L33; ribosomal protein L36; ribosomal #:chl.Z.ma.2:rem:: protein S11; ribosomal protein S12; ribosomal protein S14; #:chl.Z.ma.2:rem:: ribosomal protein S15; ribosomal protein S16; ribosomal #:chl.Z.ma.2:rem:: protein S18; ribosomal protein S19; ribosomal protein S2; #:chl.Z.ma.2:rem:: ribosomal protein S3; ribosomal protein S4; ribosomal protein #:chl.Z.ma.2:rem:: S7; ribosomal protein S8; ribosomal RNA; RNA polymerase; #:chl.Z.ma.2:rem:: RNA-Asparagine; rpl14 gene; rpl16 gene; rpl2 gene; rpl20 gene; #:chl.Z.ma.2:rem:: rpl22 gene; rpl23 gene; rpl32 gene; rpl33 gene; rpl36 gene; #:chl.Z.ma.2:rem:: rpoA gene; rpoB gene; rpoC1 gene; rpoC2 gene; rps11 gene; #:chl.Z.ma.2:rem:: rps12 gene; rps14 gene; rps15 gene; rps16; rps18 gene; rps19 #:chl.Z.ma.2:rem:: gene; rps2 gene; rps3 gene; rps4 gene; rps7 gene; rps8 gene; #:chl.Z.ma.2:rem:: Rubisco; tRNA-Alanine; tRNA-Arginine; tRNA-Asparagine; #:chl.Z.ma.2:rem:: tRNA-Aspartic acid; tRNA-Cysteine; tRNA-formil Methionine; #:chl.Z.ma.2:rem:: tRNA-Glutamic acid; tRNA-Glutamine; tRNA-Glycine; #:chl.Z.ma.2:rem:: tRNA-Histidine; tRNA-Isoleucine; tRNA-Leucine; tRNA-Lysine; #:chl.Z.ma.2:rem:: tRNA-Methionine; tRNA-Phenylalanine; tRNA-Proline; #:chl.Z.ma.2:rem:: tRNA-Serine; tRNA-Threonine; tRNA-Tryptophan; tRNA-Tyrosine; #:chl.Z.ma.2:rem:: tRNA-Valine. #:chl.Z.ma.2:rem:GenBank ACCESSION:X86563 #:chl.Z.ma.2:rem:Overlaps with:X60823, X05055, X01608, V00178, V00173, V00175, #:chl.Z.ma.2:rem:J01421, V00177, X04183, Z11973, M11592, X61188, J04502, X56673, #:chl.Z.ma.2:rem:M17842, Y00340, Y00375, X07864, J01424, V00176, X56522, X62370, #:chl.Z.ma.2:rem:X56521. #:chl.D.caro:name:Daucus carota #:chl.D.caro:subsp: #:chl.D.caro:strain: #:chl.D.caro:atcc: #:chl.D.caro:acs:X73670 #:chl.D.caro:auth: #:chl.D.caro:title: #:chl.D.caro:jour: #:chl.D.caro:who: #:chl.D.caro:date: #:chl.D.caro:rem:ID CHDC16SRR standard; DNA; ORG; 2160 BP. #:chl.D.caro:rem:XX #:chl.D.caro:rem:AC X73670; #:chl.D.caro:rem:XX #:chl.D.caro:rem:DT 09-JUL-1993 (Rel. 36, Created) #:chl.D.caro:rem:DT 09-JUL-1993 (Rel. 36, Last updated, Version 2) #:chl.D.caro:rem:XX #:chl.D.caro:rem:DE D.carota chloroplast gene for tRNA-Val, 16S rRNA and tRNA-Ile (exon #:chl.D.caro:rem:DE 1) #:chl.D.caro:rem:XX #:chl.D.caro:rem:KW 16S ribosomal RNA; ribosomal RNA; transfer RNA; transfer RNA-Ile; #:chl.D.caro:rem:KW transfer RNA-Val. #:chl.D.caro:rem:XX #:chl.D.caro:rem:OS Daucus carota #:chl.D.caro:rem:OC Eukaryota; Plantae; Embryobionta; Magnoliophyta; Magnoliopsida; #:chl.D.caro:rem:OC Rosidae; Apiales; Apiaceae. #:chl.D.caro:rem:XX #:chl.D.caro:rem:OG Chloroplast #:chl.D.caro:rem:XX #:chl.D.caro:rem:RN [1] #:chl.D.caro:rem:RA Manna F.; #:chl.D.caro:rem:RT "Nucleotide sequence of Daucus carota chloroplast 16S rRNA gene #:chl.D.caro:rem:RT and its flanking regions"; #:chl.D.caro:rem:RL Unpublished. #:chl.D.caro:rem:XX #:chl.D.caro:rem:RN [2] #:chl.D.caro:rem:RP 1-2160 #:chl.D.caro:rem:RA Manna F.; #:chl.D.caro:rem:RT ; #:chl.D.caro:rem:RL Submitted (25-JUN-1993) on tape to the EMBL Data Library by: #:chl.D.caro:rem:RL F. Manna, Istituto Internazionale di Genetica e, Biofisica, C.N.R., #:chl.D.caro:rem:RL VIA GUGLIELMO MARCONI, 12, 80125 Napoli, ITALY #:chl.D.caro:rem:XX #:chl.D.caro:rem:FH Key Location/Qualifiers #:chl.D.caro:rem:FH #:chl.D.caro:rem:FT tRNA 1..70 #:chl.D.caro:rem:FT /product="tRNA-Val" #:chl.D.caro:rem:FT source 1..2160 #:chl.D.caro:rem:FT /organism="Daucus carota" #:chl.D.caro:rem:FT /cultivar="S.Valery" #:chl.D.caro:rem:FT /chloroplast #:chl.D.caro:rem:FT rRNA 305..1792 #:chl.D.caro:rem:FT /product="16S rRNA" #:chl.D.caro:rem:FT tRNA 2114..>2160 #:chl.D.caro:rem:FT /product="tRNA-Ile" #:chl.D.caro:rem:FT /note="exon 1" #:chl.D.caro:rem:XX #:chl.D.caro:rem:SQ Sequence 2160 BP; 525 A; 497 C; 662 G; 448 T; 28 other; #:chl.C.amer:name:Conopholis americana #:chl.C.amer:subsp: #:chl.C.amer:strain: #:chl.C.amer:atcc: #:chl.C.amer:acs:X58864 #:chl.C.amer:auth: #:chl.C.amer:title: #:chl.C.amer:jour: #:chl.C.amer:who: #:chl.C.amer:date: #:chl.C.amer:rem:LOCUS CONRRN16S 1978 bp ds-DNA ORG 14-JUL-1992 #:chl.C.amer:rem:DEFINITION C.americana plastid 16S rRNA gene and spacer region #:chl.C.amer:rem:ACCESSION X58864 #:chl.C.amer:rem:KEYWORDS 16S ribosomal RNA; ribosomal DNA intergenic spacer. #:chl.C.amer:rem:SOURCE Conopholis americana DNA. #:chl.C.amer:rem: ORGANISM Chloroplast Conopholis americana #:chl.C.amer:rem: Eukaryota; Plantae; Embryobionta; Magnoliophyta; Magnoliopsida; #:chl.C.amer:rem: Asteridae; Scrophulariales; Orobanchaceae. #:chl.C.amer:rem:REFERENCE 1 (bases 1 to 1978) #:chl.C.amer:rem: AUTHORS Wimpee,C.F., Morgan,R. and Wrobel,R.L. #:chl.C.amer:rem: TITLE An aberrant plastid ribosomal RNA gene cluster in the root parasite #:chl.C.amer:rem: Conopholis americana #:chl.C.amer:rem: JOURNAL Plant Mol. Biol. 18, 275-285 (1992) #:chl.C.amer:rem: STANDARD simple staff_entry #:chl.C.amer:rem:COMMENT *source: stage=fruit; *source: clone=B2; #:chl.C.amer:rem: See X58863 for related sequence #:chl.C.amer:rem: From EMBL entry CARRN16S; dated 25-FEB-1992. #:chl.C.amer:rem:FEATURES Location/Qualifiers #:chl.C.amer:rem: rRNA 94..1580 #:chl.C.amer:rem: /product="16S ribosomal RNA" #:chl.C.amer:rem: /gene="16S rRNA" #:chl.C.amer:rem: misc_feature 1573..1580 #:chl.C.amer:rem: /note="mRNA binding site" #:chl.C.amer:rem: misc_feature 1581..>1978 #:chl.C.amer:rem: /note="16S-23S gene spacer region" #:chl.C.amer:rem:BASE COUNT 536 a 420 c 570 g 452 t #:chl.C.amer:rem:ORIGIN #:chl.E.virg:name:Epifagus virginiana #:chl.E.virg:subsp: #:chl.E.virg:strain: #:chl.E.virg:atcc: #:chl.E.virg:acs:X62099 #:chl.E.virg:auth: #:chl.E.virg:title: #:chl.E.virg:jour: #:chl.E.virg:who: #:chl.E.virg:date: #:chl.E.virg:rem:ID CHEVIARRN standard; DNA; ORG; 7395 BP. #:chl.E.virg:rem:XX #:chl.E.virg:rem:AC X62099; #:chl.E.virg:rem:XX #:chl.E.virg:rem:DT 16-JUN-1992 (Rel. 32, Created) #:chl.E.virg:rem:DT 16-JUN-1992 (Rel. 32, Last updated, Version 2) #:chl.E.virg:rem:XX #:chl.E.virg:rem:DE E.virginiana plastid ribosomal RNA operon, trnI and trnA #:chl.E.virg:rem:DE pseudogenes #:chl.E.virg:rem:XX #:chl.E.virg:rem:KW 16S ribosomal RNA; 23S ribosomal RNA; 4.5S ribosomal RNA; #:chl.E.virg:rem:KW 5S ribosomal RNA; group II intron; Pseudogene; ribosomal RNA; #:chl.E.virg:rem:KW transfer RNA-Ala; transfer RNA-Ile. #:chl.E.virg:rem:XX #:chl.E.virg:rem:OS Epifagus virginiana #:chl.E.virg:rem:OC Eukaryota; Plantae; Embryobionta; Magnoliophyta; Magnoliopsida; #:chl.E.virg:rem:OC Asteridae. #:chl.E.virg:rem:XX #:chl.E.virg:rem:OG Plastid #:chl.E.virg:rem:XX #:chl.E.virg:rem:RN [1] #:chl.E.virg:rem:RP 1-7395 #:chl.E.virg:rem:RA Wolfe K.H.; #:chl.E.virg:rem:RT ; #:chl.E.virg:rem:RL Submitted (05-SEP-1991) on tape to the EMBL Data Library by: #:chl.E.virg:rem:RL K.H. Wolfe, Indiana University, Dept of Biology, Bloomington IN #:chl.E.virg:rem:RL 47405, USA #:chl.E.virg:rem:XX #:chl.E.virg:rem:RN [2] #:chl.E.virg:rem:RP 1-610, 1976-4164 #:chl.E.virg:rem:RA Wolfe K.H., Katz-Downie D.S., Morden C.W., Palmer J.D.; #:chl.E.virg:rem:RT "Evolution of the plastid ribosomal RNA Operon in a nongreen #:chl.E.virg:rem:RT parasitic plant: Accelerated sequence evolution, promoter #:chl.E.virg:rem:RT structure, and tRNA Pseudogenes"; #:chl.E.virg:rem:RL Plant Mol. Biol. 18:1037-1048(1992). #:chl.E.virg:rem:XX #:chl.E.virg:rem:CC *source: clone=pEV300, pEV1300, pEV1310, pEV1320; #:chl.E.virg:rem:CC *source: chromosome=plastid genome; #:chl.E.virg:rem:XX #:chl.E.virg:rem:CC See also X61368 for overlapping sequence #:chl.E.virg:rem:XX #:chl.E.virg:rem:FH Key Location/Qualifiers #:chl.E.virg:rem:FH #:chl.E.virg:rem:FT rRNA 570..2061 #:chl.E.virg:rem:FT /gene="rrn16S" #:chl.E.virg:rem:FT tRNA 2324..2370 #:chl.E.virg:rem:FT /pseudo /note="exon 1" /gene="trnI(GAU)" #:chl.E.virg:rem:FT intron 2371..3258 #:chl.E.virg:rem:FT /note="pseudo group II intron" #:chl.E.virg:rem:FT tRNA 3259..3292 #:chl.E.virg:rem:FT /pseudo /note="exon 2" /gene="trnI(GAU)" #:chl.E.virg:rem:FT tRNA 3346..3388 #:chl.E.virg:rem:FT /pseudo /gene="trnA(UGC)" /note="exon 1" #:chl.E.virg:rem:FT intron 3389..3862 #:chl.E.virg:rem:FT /note="pseudo group II intron" #:chl.E.virg:rem:FT tRNA 3863..3884 #:chl.E.virg:rem:FT /pseudo /gene="trnA(UGC)" /note="exon 2" #:chl.E.virg:rem:FT rRNA 4071..6874 #:chl.E.virg:rem:FT /gene="rrn23S" #:chl.E.virg:rem:FT rRNA 6972..7074 #:chl.E.virg:rem:FT /gene="rrn4.5S" #:chl.E.virg:rem:FT rRNA 7263..7383 #:chl.E.virg:rem:FT /gene="rrn5S" #:chl.E.virg:rem:XX #:chl.E.virg:rem:SQ Sequence 7395 BP; 2000 A; 1594 C; 2064 G; 1737 T; 0 other; #:chl.O.mino:name:Chloroplast Orobanche minor. #:chl.O.mino:subsp: #:chl.O.mino:strain: #:chl.O.mino:atcc: #:chl.O.mino:acs:AJ007728 #:chl.O.mino:auth:Lohan,A.J. and Wolfe,K.H. #:chl.O.mino:title:plants #:chl.O.mino:jour:Unpublished #:chl.O.mino:who: #:chl.O.mino:date:13-AUG-1998 #:chl.O.mino:title:A subset of conserved tRNA genes in plastid DNA of nongreen #:chl.O.mino:rem:LOCUS OMI007728 2604 bp DNA PLN 13-AUG-1998 #:chl.O.mino:rem:DEFINITION Orobanche minor chloroplast trnV gene, 16S rRNA gene, trnI #:chl.O.mino:rem: pseudogene, trnA pseudogene and partial 23S rRNA gene. #:chl.O.mino:rem:ACCESSION AJ007728 Z46509 #:chl.O.mino:rem:NID g3425855 #:chl.O.mino:rem:KEYWORDS 16S rRNA gene; 16S transfer RNA; 23S ribosomal RNA; 23S rRNA gene; #:chl.O.mino:rem: transfer RNA-Val; trnA pseudogene; trnI pseudogene; trnV gene. #:chl.O.mino:rem:SOURCE Orobanche minor. #:chl.O.mino:rem: ORGANISM Chloroplast Orobanche minor #:chl.O.mino:rem: Eukaryota; Viridiplantae; Charophyta/Embryophyta group; #:chl.O.mino:rem: Embryophyta; Tracheophyta; euphyllophytes; Spermatophyta; #:chl.O.mino:rem: Magnoliophyta; eudicotyledons; Asteridae; Gentiananae; Lamiales; #:chl.O.mino:rem: Orobanchaceae; Orobanche. #:chl.O.mino:rem:REFERENCE 1 (bases 1 to 2604) #:chl.O.mino:rem: AUTHORS Lohan,A.J. and Wolfe,K.H. #:chl.O.mino:rem: TITLE A subset of conserved tRNA genes in plastid DNA of nongreen plants #:chl.O.mino:rem: JOURNAL Unpublished #:chl.O.mino:rem:REFERENCE 2 (bases 1 to 2604) #:chl.O.mino:rem: AUTHORS Lohan,A.J. #:chl.O.mino:rem: TITLE Direct Submission #:chl.O.mino:rem: JOURNAL Submitted (07-AUG-1998) Lohan A.J., Smurfit Institute of Genetics, #:chl.O.mino:rem: Trinity College Dublin, University of Dublin, Trinity College, #:chl.O.mino:rem: Dublin 2, IRELAND #:chl.C.refl:name:Cuscuta reflexa #:chl.C.refl:subsp: #:chl.C.refl:strain: #:chl.C.refl:atcc: #:chl.C.refl:acs:X72584 #:chl.C.refl:auth: #:chl.C.refl:title: #:chl.C.refl:jour: #:chl.C.refl:who: #:chl.C.refl:date: #:chl.C.refl:rem: LOCUS CHCRTRNAV 8807 bp DNA PLN 30-MAR-1993 #:chl.C.refl:rem: DEFINITION C.reflexa chloroplast genes trnA, trnI, trnV, rps7, rpS12, ndhB and #:chl.C.refl:rem: 16S rDNA #:chl.C.refl:rem: ACCESSION X72584 #:chl.C.refl:rem: KEYWORDS 16S ribosomal RNA; NADPH dehydrogenase; ndhB gene; pseudogene; #:chl.C.refl:rem: ribosomal protein; ribosomal protein S12; ribosomal protein S7; #:chl.C.refl:rem: ribosomal RNA; rps12 gene; rps7 gene; transfer RNA-Ala; #:chl.C.refl:rem: transfer RNA-Ile; transfer RNA-Val; trnA gene; trnI gene; #:chl.C.refl:rem: trnV gene. #:chl.C.refl:rem: SOURCE Cuscuta reflexa #:chl.C.refl:rem: ORGANISM Chloroplast Cuscuta reflexa #:chl.C.refl:rem: Eukaryota; Plantae; Embryobionta; Magnoliophyta; Magnoliopsida; #:chl.C.refl:rem: Asteridae; Polemoniales; Convolvulaceae. #:chl.C.refl:rem: REFERENCE 1 (bases 1 to 8807) #:chl.C.refl:rem: AUTHORS Haberhausen,G. #:chl.C.refl:rem: JOURNAL Unpublished #:chl.C.refl:rem: STANDARD full automatic #:chl.C.refl:rem: REFERENCE 2 (bases 1 to 8807) #:chl.C.refl:rem: AUTHORS Haberhausen,G. #:chl.C.refl:rem: TITLE Direct Submission #:chl.C.refl:rem: JOURNAL Submitted (04-MAR-1993) G. Haberhausen, Inst. f. #:chl.C.refl:rem: Pflanzenphysiologie, Heinrich-Buff-Ring 58, W-6300 Giessen, FRG #:chl.C.refl:rem: STANDARD full automatic #:chl.C.refl:rem: FEATURES Location/Qualifiers #:chl.C.refl:rem: source 1..8807 #:chl.C.refl:rem: /organism="Cuscuta reflexa" #:chl.C.refl:rem: /chloroplast #:chl.C.refl:rem: mRNA join(6747..7511,7854..8581) #:chl.C.refl:rem: /gene="pseudo ndhB" #:chl.C.refl:rem: tRNA complement(join(29..63,844..881)) #:chl.C.refl:rem: /gene="trnA" #:chl.C.refl:rem: /product="transfer RNA-Ala" #:chl.C.refl:rem: tRNA complement(join(946..980,1920..1956)) #:chl.C.refl:rem: /gene="trnI" #:chl.C.refl:rem: /product="transfer RNA-Ile" #:chl.C.refl:rem: rRNA complement(2260..3748) #:chl.C.refl:rem: /product="16S ribosomal RNA" #:chl.C.refl:rem: tRNA complement(3969..4040) #:chl.C.refl:rem: /gene="trnV" #:chl.C.refl:rem: /product="transfer RNA-Val" #:chl.C.refl:rem: exon complement(5198..5430) #:chl.C.refl:rem: /product="ribosomal protein S12" #:chl.C.refl:rem: /gene="rps12" #:chl.C.refl:rem: /note="rps12 3' exon" #:chl.C.refl:rem: exon 6747..7511 #:chl.C.refl:rem: /number=1 #:chl.C.refl:rem: intron 7512..7853 #:chl.C.refl:rem: /number=1 #:chl.C.refl:rem: exon 7854..8581 #:chl.C.refl:rem: /number=2 #:chl.C.refl:rem: CDS 6040..6507 #:chl.C.refl:rem: /gene="rps7" #:chl.C.refl:rem: /product="ribosomal protein S7" #:chl.C.refl:rem: /codon_start=1 #:chl.C.refl:rem: /translation="MSRRGTAEKKTAKSDPIYRNRLVNMLVNRILKHGKKSLAYQIIY #:chl.C.refl:rem: RAVKKIQQKTETNPLSVLRQAIRGVTPDITVKARRVGGSTHQVPVEIGSTQGKALAVR #:chl.C.refl:rem: WLLAASRKRPGRDMAFKLSSELVDAAKGSGDAIRKKEETHRMAEANRAFAHFR" #:chl.C.refl:rem: BASE COUNT 2428 a 2105 c 1874 g 2400 t #:chl.C.refl:rem: ORIGIN #:chl.N.pl.1:name:Nicotiana plumbaginifolia #:chl.N.pl.1:subsp: #:chl.N.pl.1:strain: #:chl.N.pl.1:atcc: #:chl.N.pl.1:acs:M82900 #:chl.N.pl.1:auth: #:chl.N.pl.1:title: #:chl.N.pl.1:jour: #:chl.N.pl.1:who: #:chl.N.pl.1:date: #:chl.N.pl.1:rem:LOCUS TOB16SRRD 1490 bp ds-DNA ORG 14-JUL-1992 #:chl.N.pl.1:rem:DEFINITION Nicotiana plumbaginifolia 16S rRNA gene. #:chl.N.pl.1:rem:ACCESSION M82900 #:chl.N.pl.1:rem:KEYWORDS 16S ribosomal RNA. #:chl.N.pl.1:rem:SOURCE Chloroplast Nicotiana plumbaginifolia (chromosome Chloroplast #:chl.N.pl.1:rem: Nicotiana plumbaginifolia) mature leaf DNA. #:chl.N.pl.1:rem: ORGANISM Chloroplast Nicotiana plumbaginifolia #:chl.N.pl.1:rem: Eukaryota; Plantae; Embryobionta; Magnoliophyta; Magnoliopsida; #:chl.N.pl.1:rem: Asteridae; Solanales; Solanaceae. #:chl.N.pl.1:rem:REFERENCE 1 (bases 1 to 1490) #:chl.N.pl.1:rem: AUTHORS Yeh,K.-C., To,K.-Y., Wu,M. and Chen,C.-C. #:chl.N.pl.1:rem: TITLE Nucleotide sequence analysis of Chloroplast 16S rRNA gene in wild #:chl.N.pl.1:rem: type and Streptomycin-resistant Nicotiana plumbaginifolia #:chl.N.pl.1:rem: JOURNAL Unpublished (1991) #:chl.N.pl.1:rem: STANDARD simple staff_entry #:chl.N.pl.1:rem:FEATURES Location/Qualifiers #:chl.N.pl.1:rem: rRNA 1..1490 #:chl.N.pl.1:rem: /product="16S ribosomal RNA" #:chl.N.pl.1:rem: /gene="16S rRNA" #:chl.N.pl.1:rem:BASE COUNT 366 a 360 c 483 g 281 t #:chl.N.pl.1:rem:ORIGIN #:chl.N.pl.2:name: #:chl.N.pl.2:subsp: #:chl.N.pl.2:strain: #:chl.N.pl.2:atcc: #:chl.N.pl.2:acs:X70938 #:chl.N.pl.2:auth: #:chl.N.pl.2:title: #:chl.N.pl.2:jour: #:chl.N.pl.2:who: #:chl.N.pl.2:date: #:chl.N.pl.2:rem:remFT /anticodon=(pos:972..974,aa:Val) #:chl.N.pl.2:rem:remFT rRNA 1226..2714 #:chl.N.pl.2:rem:remFT /product="16S ribosomal RNA" #:chl.N.pl.2:rem:remFT /gene="16SrDNA" #:chl.N.pl.2:rem:remFT tRNA 3015..3051 #:chl.N.pl.2:rem:remFT /product="transfer RNA-Ile-gau" #:chl.N.pl.2:rem:remFT /gene="trnI" #:chl.N.pl.2:rem:remFT /note="5'exon" #:chl.N.pl.2:rem:remXX #:chl.N.pl.2:rem:remSQ Sequence 3274 BP; 825 A; 713 C; 949 G; 787 T; 0 other; #:chl.N.pl.2:rem:ID CHNPTRNVI standard; DNA; ORG; 3274 BP. #:chl.N.pl.2:rem:XX #:chl.N.pl.2:rem:AC X70938; #:chl.N.pl.2:rem:XX #:chl.N.pl.2:rem:DT 06-MAR-1993 (Rel. 35, Created) #:chl.N.pl.2:rem:DT 06-MAR-1993 (Rel. 35, Last updated, Version 2) #:chl.N.pl.2:rem:XX #:chl.N.pl.2:rem:DE N.plumbaginifolia chloroplast 16SrDNA, trnV and trnI genes for 16S #:chl.N.pl.2:rem:DE ribosomal RNA, transfer RNA-Val and transfer RNA-Ile (5'exon) #:chl.N.pl.2:rem:XX #:chl.N.pl.2:rem:KW 16S ribosomal RNA; inverted repeat; ribosomal RNA; transfer RNA; #:chl.N.pl.2:rem:KW transfer RNA-Ile-gau; transfer RNA-Val-gac; trnI gene; trnV gene. #:chl.N.pl.2:rem:XX #:chl.N.pl.2:rem:OS Nicotiana plumbaginifolia (tobacco) #:chl.N.pl.2:rem:OC Eukaryota; Plantae; Embryobionta; Magnoliophyta; Magnoliopsida; #:chl.N.pl.2:rem:OC Asteridae; Solanales; Solanaceae. #:chl.N.pl.2:rem:XX #:chl.N.pl.2:rem:OG Chloroplast #:chl.N.pl.2:rem:XX #:chl.N.pl.2:rem:RN [1] #:chl.N.pl.2:rem:RP 2059-2418 #:chl.N.pl.2:rem:RA O'Neil C., Horvath V.G., Hovarth E., Dix P.H.J., Medgyesy P.; #:chl.N.pl.2:rem:RT "Chloroplast transformation in plants: polyethylene glycol (PEG) #:chl.N.pl.2:rem:RT treatment of protoplasts in an alternative to biolistic delivery #:chl.N.pl.2:rem:RT systems"; #:chl.N.pl.2:rem:RL Plant J. 0:0-0(0). #:chl.N.pl.2:rem:XX #:chl.N.pl.2:rem:RN [2] #:chl.N.pl.2:rem:RP 1-3274 #:chl.N.pl.2:rem:RA Horvath G.V.; #:chl.N.pl.2:rem:RT ; #:chl.N.pl.2:rem:RL Submitted (16-FEB-1993) on tape to the EMBL Data Library by: #:chl.N.pl.2:rem:RL G.V. Horvath, Biolgoical Research Centre, Institute of Plant Phys., #:chl.N.pl.2:rem:RL Hungarian Academy of Science, PO BOx 521, 6701 Szeged, HUNGARY #:chl.N.pl.2:rem:XX #:chl.N.pl.2:rem:CC *source: strain=wild type; #:chl.N.pl.2:rem:CC *source: haplotype=diploid; #:chl.N.pl.2:rem:CC *source: stage=mature plant; #:chl.N.pl.2:rem:CC *source: tissue=leaf; #:chl.N.pl.2:rem:XX #:chl.N.pl.2:rem:FH Key Location/Qualifiers #:chl.N.pl.2:rem:FH #:chl.N.pl.2:rem:FT tRNA 927..998 #:chl.N.pl.2:rem:FT /product="transfer RNA-Val-gac" #:chl.N.pl.2:rem:FT /gene="trnV" #:chl.N.ta.1:name:chloroplast,Nicotiana tabacum(tabacco) #:chl.N.ta.1:subsp: #:chl.N.ta.1:strain: #:chl.N.ta.1:atcc:???? #:chl.N.ta.1:acs:V00165 #:chl.N.ta.1:auth: #:chl.N.ta.1:title: #:chl.N.ta.1:jour:Sugiura FINISH #:chl.N.ta.1:who:published #:chl.N.ta.1:date:Nov. 19 1981 #:chl.N.ta.1:rem:Phylo:Eubacteria,Cyanobacteria,chloroplast #:chl.N.ta.1:rem:LOCUS CHNTRN1 2113 bp DNA PLN 31-MAR-1992 #:chl.N.ta.1:rem:DEFINITION Tobacco chloroplast genes for 16S ribosomal RNA and tRNA-Val. #:chl.N.ta.1:rem:ACCESSION V00165 J01453 #:chl.N.ta.1:rem:KEYWORDS 16S ribosomal RNA; ribosomal RNA; transfer RNA; transfer RNA-Val. #:chl.N.ta.1:rem:SOURCE tobacco #:chl.N.ta.1:rem: ORGANISM Chloroplast Nicotiana tabacum #:chl.N.ta.1:rem: Eukaryota; Plantae; Embryobionta; Magnoliophyta; Magnoliopsida; #:chl.N.ta.1:rem: Asteridae; Solanales; Solanaceae. #:chl.N.ta.1:rem:REFERENCE 1 (bases 628 to 2113) #:chl.N.ta.1:rem: AUTHORS Tohdoh,N. and Sugiura,M. #:chl.N.ta.1:rem: TITLE The complete nucleotide sequence of a 16S ribosomal RNA gene from #:chl.N.ta.1:rem: tobacco chloroplasts #:chl.N.ta.1:rem: JOURNAL Gene 17, 213-218 (1982) #:chl.N.ta.1:rem: STANDARD full automatic #:chl.N.ta.1:rem:REFERENCE 2 (bases 1 to 766) #:chl.N.ta.1:rem: AUTHORS Tohdoh,N., Shinozaki,K. and Sugiura,M. #:chl.N.ta.1:rem: TITLE Sequence of a putative promoter region for the rRNA genes of #:chl.N.ta.1:rem: tobacco chloroplast DNA #:chl.N.ta.1:rem: JOURNAL Nucleic Acids Res. 9, 5399-5406 (1981) #:chl.N.ta.1:rem: STANDARD full automatic #:chl.N.ta.1:rem:COMMENT #:chl.N.ta.1:rem: NCBI gi: 11799 #:chl.N.ta.1:rem:FEATURES Location/Qualifiers #:chl.N.ta.1:rem: source 1..2113 #:chl.N.ta.1:rem: /organism="Nicotiana tabacum" #:chl.N.ta.1:rem: /chloroplast #:chl.N.ta.1:rem: tRNA 328..399 #:chl.N.ta.1:rem: /note="tRNA-Val" #:chl.N.ta.1:rem: rRNA 628..2113 #:chl.N.ta.1:rem: /note="16S rRNA" #:chl.N.ta.1:rem:BASE COUNT 530 a 473 c 649 g 461 t #:chl.N.ta.1:rem:ORIGIN #:chl.N.ta.2:name:Chloroplast Nicotiana tabacum. #:chl.N.ta.2:subsp: #:chl.N.ta.2:strain: #:chl.N.ta.2:atcc: #:chl.N.ta.2:acs:Z00044 #:chl.N.ta.2:auth:Kato,A., Tohdoh,N., Shimada,H. and Sugiura,M. #:chl.N.ta.2:title:The complete nucleotide sequence of tobacco chloroplast genome: #:chl.N.ta.2:jour:EMBO J. 5, 2043-2049 (1986) #:chl.N.ta.2:who: #:chl.N.ta.2:date:03-SEP-1997 #:chl.N.ta.2:auth:Shinozaki,K., Ohme,M., Tanaka,M., Wakasugi,T., Hayashida,N., #:chl.N.ta.2:auth:Matsubayashi,T., Zaita,N., Chunwongse,J., Obokata,J., #:chl.N.ta.2:auth:Yamaguchi-Shinozaki,K., Ohto,C., Torazawa,K., Meng,B.Y., Sugita #:chl.N.ta.2:auth:,M., Deno,H., Kamogashira,T., Yamada,K., Kusuda,J., Takaiwa,F., #:chl.N.ta.2:title:its gene organization and expression #:chl.N.ta.2:rem:ref:1 (bases 1 to 155844) #:chl.N.ta.2:rem:ref:2 (bases 1 to 155844) #:chl.N.ta.2:rem:auth:Sugiura,M. #:chl.N.ta.2:rem:jour:Submitted (12-AUG-1986) to the EMBL/GenBank/DDBJ databases #:chl.N.ta.2:rem:title:Direct Submission #:chl.N.ta.2:rem:ref:3 (bases 1 to 155844) #:chl.N.ta.2:rem:auth:Shimada,H. and Sugiura,M. #:chl.N.ta.2:rem:jour:Nucleic Acids Res. 19 (5), 983-995 (1991) #:chl.N.ta.2:rem:title:Fine structural features of the chloroplast genome: #:chl.N.ta.2:rem:: comparison of the sequenced chloroplast genomes #:chl.N.ta.2:rem:ref:4 (bases 1 to 155844) #:chl.N.ta.2:rem:auth:Mitchelson,K. and Stephen,J. #:chl.N.ta.2:rem:jour:Nucleic Acids Res. 19 (11), 3150 (1991) #:chl.N.ta.2:rem:title:Processing of histidine transfer RNA precursors in tobacco #:chl.N.ta.2:rem:: chloroplasts #:chl.N.ta.2:rem:ref:5 (bases 31640 to 32290; 90230 to 91610) #:chl.N.ta.2:rem:auth:Ayliffe,M.A. and Timmis,J.N. #:chl.N.ta.2:rem:jour:Mol. Gen. Genet. 236 (1), 105-112 (1992) #:chl.N.ta.2:rem:title:Plastid DNA sequence homologies in the tobacco nuclear #:chl.N.ta.2:rem:: genome #:chl.N.ta.2:rem:ref:6 (bases 1 to 155844) #:chl.N.ta.2:rem:auth:Morton,B.R. and Clegg,M.T. #:chl.N.ta.2:rem:jour:Curr. Genet. 24 (4), 357-365 (1993) #:chl.N.ta.2:rem:title:A chloroplast DNA mutational hotspot and gene conversion #:chl.N.ta.2:rem:: in a noncoding region near rbcL in the grass family (Poaceae) #:chl.N.ta.2:rem:ref:7 (bases 1 to 155844) #:chl.N.ta.2:rem:auth:Kunnimalaiyaan,M. and Nielsen,B.L. #:chl.N.ta.2:rem:jour:Nucleic Acids Res. 25, 3681-3686 (1997) #:chl.N.ta.2:rem:title:Fine mapping of replication origins (oriA and oriB) in #:chl.N.ta.2:rem:: Nicotiana tabacum chloroplast DNA #:chl.N.ta.2:rem:KEYWORDS:16S ribosomal RNA; 23S ribosomal RNA; 4.5S ribosomal #:chl.N.ta.2:rem:: RNA; 5S ribosomal RNA; ATP synthetase; ATPase; autonomous #:chl.N.ta.2:rem:: replication; carboxylase; chloroplast; circular; complete #:chl.N.ta.2:rem:: genome; cytochrome b-559; cytochrome b6; cytochrome f; #:chl.N.ta.2:rem:: initiation factor; inverted repeat; NADH dehydrogenase; #:chl.N.ta.2:rem:: phosphoprotein; ribosomal protein L14; ribosomal protein L16; #:chl.N.ta.2:rem:: ribosomal protein L2; ribosomal protein L20; ribosomal #:chl.N.ta.2:rem:: protein L22; ribosomal protein L23; ribosomal protein L33; #:chl.N.ta.2:rem:: ribosomal protein S11; ribosomal protein S12; ribosomal #:chl.N.ta.2:rem:: protein S15; ribosomal protein S18; ribosomal protein S19; #:chl.N.ta.2:rem:: ribosomal protein S2; ribosomal protein S3; ribosomal protein #:chl.N.ta.2:rem:: S7; ribosomal protein S8; ribosomal RNA; ribulose #:chl.N.ta.2:rem:: bisphosphate carboxylase; RNA polymerase; transfer RNA; #:chl.N.ta.2:rem:: transfer RNA-Ala; transfer RNA-Arg; transfer RNA-Asn; #:chl.N.ta.2:rem:: transfer RNA-Asp; transfer RNA-Cys; transfer RNA-Glu; #:chl.N.ta.2:rem:: transfer RNA-Gly; transfer RNA-His; transfer RNA-Ile; #:chl.N.ta.2:rem:: transfer RNA-Leu; transfer RNA-Lys; transfer RNA-Met; #:chl.N.ta.2:rem:: transfer RNA-Phe; transfer RNA-Pro; transfer RNA-Ser; #:chl.N.ta.2:rem:: transfer RNA-Thr; transfer RNA-Trp; transfer RNA-Tyr; #:chl.N.ta.2:rem:: transfer RNA-Val; unidentified reading frame. #:chl.N.ta.2:rem:GenBank ACCESSION:Z00044 S54304 #:chl.N.ta.2:rem:The circular tobacco chloroplast DNA sequence is presented in a #:chl.N.ta.2:rem:linearized form by cutting at the junction (JLA) between IRA and #:chl.N.ta.2:rem:LSC. #:chl.N.ta.2:rem:JLA is designated zero and numbered proceeding towards LSC. The #:chl.N.ta.2:rem:DNA #:chl.N.ta.2:rem:strand which codes for the large subunit of ribulose #:chl.N.ta.2:rem:1,5-bisphosphate carboxylase is designated as A strand and the #:chl.N.ta.2:rem:complementary strand as B strand. #:chl.N.ta.2:rem:Nucleotide sequence of the B strand is presented. #:chl.N.ta.2:rem:Large single copy region (LSC): 1 - 86684 (86684 bp) #:chl.N.ta.2:rem:Inverted #:chl.N.ta.2:rem:repeat B (IRB) : 86685 - 112023 (25339 bp) Small single #:chl.N.ta.2:rem:copy #:chl.N.ta.2:rem:region (SSC): 112024 - 130505 (18482 bp) Inverted repeat A (IRA) #:chl.N.ta.2:rem: : 130506 - 155844 (25339 bp) An alphabetical index of tobacco #:chl.N.ta.2:rem:chloroplast genes and ORFs #:chl.N.ta.2:rem:GENE NUCLEOTIDE NUMBER (FROM) #:chl.N.ta.2:rem:ars1 112768 #:chl.N.ta.2:rem:ars2 14570 #:chl.N.ta.2:rem:atpA 10625 #:chl.N.ta.2:rem:atpB 55273 #:chl.N.ta.2:rem:atpE 54875 #:chl.N.ta.2:rem:atpF 12203 #:chl.N.ta.2:rem:atpH 13854 #:chl.N.ta.2:rem:atpI 15258 #:chl.N.ta.2:rem:infA 82175 #:chl.N.ta.2:rem:ndhA 121597 #:chl.N.ta.2:rem:ndhB 97047, 143640 #:chl.N.ta.2:rem:ndhC 52297 #:chl.N.ta.2:rem:ndhD 117429 #:chl.N.ta.2:rem:ndhE 119555 #:chl.N.ta.2:rem:ndhF 112066 #:chl.N.ta.2:rem:ORF39 66741 #:chl.N.ta.2:rem:ORF62 37586 #:chl.N.ta.2:rem:ORF70A 48933 #:chl.N.ta.2:rem:ORF70B 102099, 140218 #:chl.N.ta.2:rem:ORF73 72465 #:chl.N.ta.2:rem:ORF74A 46240 #:chl.N.ta.2:rem:ORF74B 73323 #:chl.N.ta.2:rem:ORF75 110593, 131709 #:chl.N.ta.2:rem:ORF77 44264 #:chl.N.ta.2:rem:ORF79 96553, 145737 #:chl.N.ta.2:rem:ORF80 20181 #:chl.N.ta.2:rem:ORF82 45146 #:chl.N.ta.2:rem:ORF87 95815, 146451 #:chl.N.ta.2:rem:ORF90 20374 #:chl.N.ta.2:rem:ORF92 96116, 146135 #:chl.N.ta.2:rem:ORF98 7724 #:chl.N.ta.2:rem:ORF99A 66168 #:chl.N.ta.2:rem:ORF99B 120084 #:chl.N.ta.2:rem:ORF103 67269 #:chl.N.ta.2:rem:ORF105 37241 #:chl.N.ta.2:rem:ORF115 96057, 146125 #:chl.N.ta.2:rem:ORF120 52297 #:chl.N.ta.2:rem:ORF131 101948, 140186 #:chl.N.ta.2:rem:ORF134 19873 #:chl.N.ta.2:rem:ORF138 120196 #:chl.N.ta.2:rem:ORF154 31280 #:chl.N.ta.2:rem:ORF158 50981 #:chl.N.ta.2:rem:ORF167 121009 #:chl.N.ta.2:rem:ORF184 62630 #:chl.N.ta.2:rem:ORF228 125796 #:chl.N.ta.2:rem:ORF229 63407 #:chl.N.ta.2:rem:ORF284 51563 #:chl.N.ta.2:rem:ORF313 116250 #:chl.N.ta.2:rem:ORF350 111025 #:chl.N.ta.2:rem:ORF393 123842 #:chl.N.ta.2:rem:ORF509A 2129 #:chl.N.ta.2:rem:ORF512 59785 #:chl.N.ta.2:rem:ORF581 88883, 151901 #:chl.N.ta.2:rem:ORF1244 127767 #:chl.N.ta.2:rem:ORF1708 90598, 146805 #:chl.N.ta.2:rem:petA 64327 #:chl.N.ta.2:rem:petB 77449 #:chl.N.ta.2:rem:petD 79845 #:chl.N.ta.2:rem:psaA 41226 #:chl.N.ta.2:rem:psaB 38996 #:chl.N.ta.2:rem:psbA 534 #:chl.N.ta.2:rem:psbB 74950 #:chl.N.ta.2:rem:psbC 35471 #:chl.N.ta.2:rem:psbD 34462 #:chl.N.ta.2:rem:psbE 66870 #:chl.N.ta.2:rem:psbF 77098 #:chl.N.ta.2:rem:rbcL 57587 #:chl.N.ta.2:rem:4.5SrDNA 109236, 133191 #:chl.N.ta.2:rem:5SrDNA 109595, 132814 #:chl.N.ta.2:rem:16SrDNA 102758, 138283 #:chl.N.ta.2:rem:23SrDNA 106325, 133395 #:chl.N.ta.2:rem:rpl2 86741, 154298 #:chl.N.ta.2:rem:rpl14 83173 #:chl.N.ta.2:rem:rpl16 83669 #:chl.N.ta.2:rem:rpl20 71015 #:chl.N.ta.2:rem:rpl22 85881 #:chl.N.ta.2:rem:rpl23 88250, 153998 #:chl.N.ta.2:rem:rpl33 70123 #:chl.N.ta.2:rem:rpoA 80452 #:chl.N.ta.2:rem:rpoB 24289 #:chl.N.ta.2:rem:rpoC 17165 #:chl.N.ta.2:rem:rps2 16228 #:chl.N.ta.2:rem:rps3 85240 #:chl.N.ta.2:rem:rps4 47528 #:chl.N.ta.2:rem:rps7 99537, 142525 #:chl.N.ta.2:rem:rps8 82600 #:chl.N.ta.2:rem:rps11 81531 #:chl.N.ta.2:rem:5'-rps12 72213 #:chl.N.ta.2:rem:3'-rps12 100058, 141678 #:chl.N.ta.2:rem:rps14 38571 #:chl.N.ta.2:rem:rps15 125135 #:chl.N.ta.2:rem:rps16 5094 #:chl.N.ta.2:rem:rps18 70510 #:chl.N.ta.2:rem:rps19 86402 #:chl.N.ta.2:rem:secX 82049 #:chl.N.ta.2:rem:ssb 126740 #:chl.N.ta.2:rem:trnA-UGC 105390, 136358 #:chl.N.ta.2:rem:trnC-GCA 28783 #:chl.N.ta.2:rem:trnD-GUC 31926 #:chl.N.ta.2:rem:trnE-UUC 32251 #:chl.N.ta.2:rem:trnF-GAA 50232 #:chl.N.ta.2:rem:trnG-GCC 38050 #:chl.N.ta.2:rem:trnG-UCC 9499 #:chl.N.ta.2:rem:trnH-GUG 6 #:chl.N.ta.2:rem:trnI-CAU 88697, 153759 #:chl.N.ta.2:rem:trnI-GAU 104547, 137204 #:chl.N.ta.2:rem:trnK-UUU 1810 #:chl.N.ta.2:rem:trnL-CAA 96427, 146022 #:chl.N.ta.2:rem:trnL-UAA 49288 #:chl.N.ta.2:rem:trnL-UAG 116067 #:chl.N.ta.2:rem:trnM-CAU 54581 #:chl.N.ta.2:rem:trnfM-CAU 38348 #:chl.N.ta.2:rem:trnN-GUU 110628, 131830 #:chl.N.ta.2:rem:trnP-UGG 69045 #:chl.N.ta.2:rem:trnQ-UUG 7416 #:chl.N.ta.2:rem:trnR-ACG 109973, 132483 #:chl.N.ta.2:rem:trnR-UCU 10430 #:chl.N.ta.2:rem:trnS-GCU 8632 #:chl.N.ta.2:rem:trnS-GGA 47111 #:chl.N.ta.2:rem:trnS-UGA 37132 #:chl.N.ta.2:rem:trnT-GGU 33172 #:chl.N.ta.2:rem:trnT-UGU 48505 #:chl.N.ta.2:rem:trnV-GAC 102459, 139999 #:chl.N.ta.2:rem:trnV-UAC 53747 #:chl.N.ta.2:rem:trnW-CCA 68807 #:chl.N.ta.2:rem:trnY-GUA 32108. #:chl.G.max:name:Chloroplast Glycine max #:chl.G.max:subsp: #:chl.G.max:strain: #:chl.G.max:atcc: #:chl.G.max:acs:X60428 X07675 #:chl.G.max:auth: #:chl.G.max:title: #:chl.G.max:jour: #:chl.G.max:who: #:chl.G.max:date: #:chl.G.max:rem:LOCUS SOYCPV16S 2000 bp ds-DNA ORG 15-DEC-1988 #:chl.G.max:rem:DEFINITION Soybean chloroplast DNA for tRNA-Val and 16S rRNA. #:chl.G.max:rem:ACCESSION X06428 #:chl.G.max:rem:KEYWORDS 16S ribosomal RNA; ribosomal RNA; transfer RNA; transfer RNA-Val. #:chl.G.max:rem:SOURCE soybean (Chloroplast Glycine max). #:chl.G.max:rem: ORGANISM Chloroplast Glycine max #:chl.G.max:rem: Eukaryota; Planta; Spermatophyta; Magnoliopsida; Rosidae; #:chl.G.max:rem: Fabales; Fabaceae. #:chl.G.max:rem:REFERENCE 1 (bases 1 to 2000; enum. 1 to 2000) #:chl.G.max:rem: AUTHORS Stutz,E. #:chl.G.max:rem: JOURNAL Unpublished (1987) Univ de Neuchatel,CH-2000 Neuchatel,Switzerland #:chl.G.max:rem: STANDARD simple automatic #:chl.G.max:rem:REFERENCE 2 (bases 1 to 2000; enum. 1 to 2000) #:chl.G.max:rem: AUTHORS von Allmen,J.-M. and Stutz,E. #:chl.G.max:rem: TITLE The soybean chloroplast genome: Nucleotide seque4nce of a region #:chl.G.max:rem: containing tRNA-Val (GAC) and 16S rRNA gene #:chl.G.max:rem: JOURNAL Nucl Acid Res 16, 1200-1200 (1988) #:chl.G.max:rem: STANDARD simple automatic #:chl.G.max:rem:COMMENT EMBL features not translated to GenBank features: #:chl.G.max:rem: key from to description #:chl.G.max:rem: PRM 78 83 put. -35 region (P1) #:chl.G.max:rem: PRM 102 107 put. -10 region (P1) #:chl.G.max:rem: PRM 172 177 put. alt. -35 region (P2) #:chl.G.max:rem: PRM 195 200 put. alt. -10 region (P2) #:chl.G.max:rem: ANTICDN 261 263 anticodon GAC #:chl.G.max:rem: PRM 374 379 put. -35 region (P3) #:chl.G.max:rem: PRM 395 400 put. -10 region (P3) #:chl.G.max:rem:FEATURES from to/span description #:chl.G.max:rem: tRNA 229 300 tRNA-Val #:chl.G.max:rem: rRNA 522 1991 16S rRNA #:chl.G.max:rem:BASE COUNT 523 a 436 c 604 g 437 t #:chl.G.max:rem:ORIGIN #:chl.P.sa.1:name:Pisum sativum #:chl.P.sa.1:subsp: #:chl.P.sa.1:strain: #:chl.P.sa.1:atcc: #:chl.P.sa.1:acs:X55033 #:chl.P.sa.1:auth: #:chl.P.sa.1:title: #:chl.P.sa.1:jour: #:chl.P.sa.1:who: #:chl.P.sa.1:date: #:chl.P.sa.1:rem:LOCUS PEACPPSRRN 7920 bp ds-DNA ORG 28-JUL-1992 #:chl.P.sa.1:rem:DEFINITION P.sativum chloroplast DNA of the single ribosomal RNA operon #:chl.P.sa.1:rem:ACCESSION X55033 #:chl.P.sa.1:rem:KEYWORDS . #:chl.P.sa.1:rem:SOURCE Chloroplast Pisum sativum DNA. #:chl.P.sa.1:rem: ORGANISM Chloroplast Pisum sativum #:chl.P.sa.1:rem: Eukaryota; Plantae; Embryobionta; Magnoliophyta; Magnoliopsida; #:chl.P.sa.1:rem: Rosidae; Fabales; Fabaceae. #:chl.P.sa.1:rem:REFERENCE 1 (bases 1 to 7920) #:chl.P.sa.1:rem: AUTHORS Stummann,B.M., Lehmbeck,J., Bookjans,G. and Henningsen,K.W. #:chl.P.sa.1:rem: TITLE Nucleotide sequence of the single ribosomal RNA operon of pea #:chl.P.sa.1:rem: chloroplast DNA #:chl.P.sa.1:rem: JOURNAL Physiol. Plantarum 72, 139-146 (1988) #:chl.P.sa.1:rem: STANDARD full automatic #:chl.P.sa.1:rem:COMMENT From EMBL entry CHPSRRNAO; dated 01-JUL-1992. #:chl.P.sa.1:rem:FEATURES Location/Qualifiers #:chl.P.sa.1:rem: tRNA join(2699..2734,3418..3453) #:chl.P.sa.1:rem: /gene="trnI-GAU" #:chl.P.sa.1:rem: tRNA join(3519..3555,4356..4391) #:chl.P.sa.1:rem: /gene="trnA-UGC" #:chl.P.sa.1:rem: -35_signal 58..63 #:chl.P.sa.1:rem: -10_signal 86..91 #:chl.P.sa.1:rem: -35_signal 349..354 #:chl.P.sa.1:rem: -10_signal 372..377 #:chl.P.sa.1:rem: tRNA 412..483 #:chl.P.sa.1:rem: /gene="trnV-GAC" #:chl.P.sa.1:rem: -35_signal 549..554 #:chl.P.sa.1:rem: -10_signal 573..578 #:chl.P.sa.1:rem: rRNA 717..2227 #:chl.P.sa.1:rem: /product="16S ribosomal RNA" #:chl.P.sa.1:rem: rRNA 4501..7312 #:chl.P.sa.1:rem: /product="23S ribosomal RNA" #:chl.P.sa.1:rem: rRNA 7391..7495 #:chl.P.sa.1:rem: /product="4.5S ribosomal RNA" #:chl.P.sa.1:rem: rRNA 7726..7846 #:chl.P.sa.1:rem: /product="5S ribosomal RNA" #:chl.P.sa.1:rem:BASE COUNT 2136 a 1745 c 2219 g 1820 t #:chl.P.sa.1:rem:ORIGIN #:chl.P.sa.2:name:Chloroplast Pisum sativum #:chl.P.sa.2:subsp: #:chl.P.sa.2:strain: #:chl.P.sa.2:atcc: #:chl.P.sa.2:acs:M37430 #:chl.P.sa.2:auth: #:chl.P.sa.2:title: #:chl.P.sa.2:jour: #:chl.P.sa.2:who: #:chl.P.sa.2:date: #:chl.P.sa.2:rem:LOCUS PEACPDKAA 7920 bp ss-mRNA ORG 19-SEP-1990 #:chl.P.sa.2:rem:DEFINITION Pea Chloroplast 4.5S, 5S, 16S and 23S mRNA. #:chl.P.sa.2:rem:ACCESSION M37430 #:chl.P.sa.2:rem:KEYWORDS ribosomal protein. #:chl.P.sa.2:rem:SOURCE Pea chloroplast, cDNA to mRNA. #:chl.P.sa.2:rem: ORGANISM Chloroplast Pisum sativum #:chl.P.sa.2:rem: Eukaryota; Plantae; Embryobionta; Magnoliophyta; Magnoliopsida; #:chl.P.sa.2:rem: Rosidae; Rosales; Fabaceaea; Pisum sativum. #:chl.P.sa.2:rem:REFERENCE 1 (bases 1 to 7920) #:chl.P.sa.2:rem: AUTHORS Stummann,B.M., Lehmbeck,J., Bookjans,G. and Henningsen,K.W. #:chl.P.sa.2:rem: TITLE Nucleotide sequence of the single ribosomal RNA operon of pea #:chl.P.sa.2:rem: chloroplast DNA #:chl.P.sa.2:rem: JOURNAL Physiologia Plantarum 72, 139-146 (1988) #:chl.P.sa.2:rem: STANDARD simple staff_entry #:chl.P.sa.2:rem:BASE COUNT 2135 a 1746 c 2219 g 1820 t #:chl.P.sa.2:rem:ORIGIN #:chl.P.sa.3:name:Chloroplast Pisum sativum #:chl.P.sa.3:subsp: #:chl.P.sa.3:strain: #:chl.P.sa.3:atcc: #:chl.P.sa.3:acs:X51598 #:chl.P.sa.3:auth: #:chl.P.sa.3:title: #:chl.P.sa.3:jour: #:chl.P.sa.3:who: #:chl.P.sa.3:date: #:chl.P.sa.3:rem:ID PS16SVAL standard; DNA; ORG; 2315 BP. #:chl.P.sa.3:rem:XX #:chl.P.sa.3:rem:AC X51598; #:chl.P.sa.3:rem:XX #:chl.P.sa.3:rem:DT 26-MAY-1992 (Rel. 32, Created) #:chl.P.sa.3:rem:DT 26-MAY-1992 (Rel. 32, Last updated, Version 1) #:chl.P.sa.3:rem:XX #:chl.P.sa.3:rem:DE P.sativum 16S rRNA & tRNA-Val chloroplast genes #:chl.P.sa.3:rem:XX #:chl.P.sa.3:rem:KW 16S ribosomal DNA; 16S ribosomal RNA; chloroplast genome; #:chl.P.sa.3:rem:KW transfer RNA-Val. #:chl.P.sa.3:rem:XX #:chl.P.sa.3:rem:OS Pisum sativum (pea) #:chl.P.sa.3:rem:OC Eukaryota; Plantae; Embryobionta; Magnoliophyta; Magnoliopsida; #:chl.P.sa.3:rem:OC Rosidae; Fabales; Fabaceae. #:chl.P.sa.3:rem:XX #:chl.P.sa.3:rem:OG Chloroplast #:chl.P.sa.3:rem:XX #:chl.P.sa.3:rem:RN [1] #:chl.P.sa.3:rem:RP 1-2315 #:chl.P.sa.3:rem:RA Jagendorf A.T.; #:chl.P.sa.3:rem:RT ; #:chl.P.sa.3:rem:RL Submitted (02-JAN-1989) on tape to the EMBL Data Library by: #:chl.P.sa.3:rem:RL Jagendorf A.T., Cornell University, Section of Plant Biology, 228 #:chl.P.sa.3:rem:RL Plant Science Building, Ithaca, NY 14853, USA. #:chl.P.sa.3:rem:XX #:chl.P.sa.3:rem:RN [2] #:chl.P.sa.3:rem:RP 1-2315 #:chl.P.sa.3:rem:RA Cerutti H., Jagendorf A.T.; #:chl.P.sa.3:rem:RT "Nucleotide sequence of the chloroplast 16S rRNA gene from pea #:chl.P.sa.3:rem:RT (Pisum sativum L.)"; #:chl.P.sa.3:rem:RL Plant Mol. Biol. 17:125-126(1991). #:chl.P.sa.3:rem:XX #:chl.P.sa.3:rem:CC *source: strain=cr. Progress No.9; #:chl.P.sa.3:rem:CC *source: stage=10 day old seedlings; #:chl.P.sa.3:rem:CC *source: clone=pBX5; #:chl.P.sa.3:rem:CC *source: chromosome=plastome; #:chl.P.sa.3:rem:XX #:chl.P.sa.3:rem:CC See also X55033, M37430 & M16862-6 #:chl.P.sa.3:rem:XX #:chl.P.sa.3:rem:FH Key Location/Qualifiers #:chl.P.sa.3:rem:FH #:chl.P.sa.3:rem:FT -35_signal 81..86 #:chl.P.sa.3:rem:FT -10_signal 104..109 #:chl.P.sa.3:rem:FT tRNA 144..215 #:chl.P.sa.3:rem:FT /gene="tRNA-Val" #:chl.P.sa.3:rem:FT -35_signal 281..286 #:chl.P.sa.3:rem:FT -10_signal 305..310 #:chl.P.sa.3:rem:FT rRNA 472..1961 #:chl.P.sa.3:rem:FT /gene="16S rRNA" #:chl.P.sa.3:rem:XX #:chl.P.sa.3:rem:SQ Sequence 2315 BP; 625 A; 493 C; 668 G; 529 T; 0 other; #:chl.A.glut:name:Chloroplast Alnus glutinosa. #:chl.A.glut:subsp: #:chl.A.glut:strain: #:chl.A.glut:atcc: #:chl.A.glut:acs:U46209 #:chl.A.glut:auth:Wolters,D.J., Zoetendal,E.G., Akkermans,A.D.L. and Van Dijk,C #:chl.A.glut:title:A phylogenetic studies on uncultured ineffective Frankia #:chl.A.glut:jour:Unpublished #:chl.A.glut:who: #:chl.A.glut:date:02-JAN-1999 #:chl.A.glut:auth:. #:chl.A.glut:title:strains from A.glutinosa L. (Gaertn.) in the Netherlands #:chl.A.glut:rem:LOCUS AGU46209 996 bp DNA PLN 02-JAN-1999 #:chl.A.glut:rem:DEFINITION Alnus glutinosa 16S rRNA gene, chloroplast gene encoding #:chl.A.glut:rem: chloroplast rRNA, partial sequence. #:chl.A.glut:rem:ACCESSION U46209 #:chl.A.glut:rem:NID g4097165 #:chl.A.glut:rem:KEYWORDS . #:chl.A.glut:rem:SOURCE Alnus glutinosa. #:chl.A.glut:rem: ORGANISM Chloroplast Alnus glutinosa #:chl.A.glut:rem: Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; #:chl.A.glut:rem: euphyllophytes; Spermatophyta; Magnoliophyta; eudicotyledons; #:chl.A.glut:rem: Rosidae; Fagales; Betulaceae; Alnus. #:chl.A.glut:rem:REFERENCE 1 (bases 1 to 996) #:chl.A.glut:rem: AUTHORS Wolters,D.J., Zoetendal,E.G., Akkermans,A.D.L. and Van Dijk,C. #:chl.A.glut:rem: TITLE A phylogenetic studies on uncultured ineffective Frankia strains #:chl.A.glut:rem: from A.glutinosa L. (Gaertn.) in the Netherlands #:chl.A.glut:rem: JOURNAL Unpublished #:chl.A.glut:rem:REFERENCE 2 (bases 1 to 996) #:chl.A.glut:rem: AUTHORS Wolters,D.J. #:chl.A.glut:rem: TITLE Direct Submission #:chl.A.glut:rem: JOURNAL Submitted (18-JAN-1996) D.J. Wolters, NIOO-CTO, Boterhoeksestraat #:chl.A.glut:rem: 22, PO Box 6666 GA, Heteren, Gld, The Netherlands #:chl.A.glut:rem:FEATURES Location/Qualifiers #:chl.A.glut:rem: source 1..996 #:chl.A.glut:rem: /organism="Alnus glutinosa" #:chl.A.glut:rem: /chloroplast #:chl.A.glut:rem: /db_xref="taxon:3517" #:chl.A.glut:rem: rRNA <1..>996 #:chl.A.glut:rem: /product="16S rRNA" #:chl.A.glut:rem:BASE COUNT 255 a 227 c 332 g 182 t #:chl.A.inca:name:Chloroplast Alnus incana #:chl.A.inca:subsp: #:chl.A.inca:strain: #:chl.A.inca:atcc: #:chl.A.inca:acs:U03555 #:chl.A.inca:auth: #:chl.A.inca:title: #:chl.A.inca:jour: #:chl.A.inca:who: #:chl.A.inca:date: #:chl.A.inca:rem:LOCUS AIU03555 1842 bp DNA PLN 01-JUN-1994 #:chl.A.inca:rem:DEFINITION Alnus incana chloroplast 16S rRNA gene, complete sequence. #:chl.A.inca:rem:ACCESSION U03555 #:chl.A.inca:rem:KEYWORDS . #:chl.A.inca:rem:SOURCE Alnus incana #:chl.A.inca:rem: ORGANISM Chloroplast Alnus incana #:chl.A.inca:rem: Eucaryotae; Embryophyta; Magnoliophyta; Magnoliopsida; Fagales; #:chl.A.inca:rem: Betulaceae; Alnus. #:chl.A.inca:rem:REFERENCE 1 (bases 1 to 1842) #:chl.A.inca:rem: AUTHORS Johnson,D.A. #:chl.A.inca:rem: TITLE Nucleotide Sequence of the 16S rRNA from the alder (Alnus incana) #:chl.A.inca:rem: JOURNAL Thesis (1993) Biology, University of Ottawa #:chl.A.inca:rem: STANDARD full automatic #:chl.A.inca:rem:REFERENCE 2 (bases 1 to 1842) #:chl.A.inca:rem: AUTHORS Johnson,D.A. #:chl.A.inca:rem: TITLE Direct Submission #:chl.A.inca:rem: JOURNAL Submitted (17-NOV-1993) Johnson D.A., University of Ottawa, 30 #:chl.A.inca:rem: Marie Curie, Ottawa, Ontario, Canada #:chl.A.inca:rem: STANDARD full automatic #:chl.A.inca:rem:COMMENT #:chl.A.inca:rem: NCBI gi: 495322 #:chl.A.inca:rem:FEATURES Location/Qualifiers #:chl.A.inca:rem: rRNA 175..1666 #:chl.A.inca:rem: /product="16S ribosomal RNA" #:chl.A.inca:rem: /gene="16S rDNA" #:chl.A.inca:rem: /note="Sequence of 16S rRNA coding region defined by #:chl.A.inca:rem: homology to previously defined sequences" #:chl.A.inca:rem: source 1..1842 #:chl.A.inca:rem: /organism="Alnus incana" #:chl.A.inca:rem: /chloroplast #:chl.A.inca:rem:BASE COUNT 465 a 418 c 581 g 378 t #:chl.A.inca:rem:ORIGIN #:chl.C.papa:name:Chloroplast Carica papaya. #:chl.C.papa:subsp: #:chl.C.papa:strain: #:chl.C.papa:atcc: #:chl.C.papa:acs:U76911 #:chl.C.papa:auth:Davis,M.J., Ying,Z., Brunner,B.R., Pantoja,A. and Ferwerda,F.H #:chl.C.papa:title:Rickettsial relative associated with papaya bunchy top #:chl.C.papa:jour:Curr. Microbiol. 36 (2), 80-84 (1998) #:chl.C.papa:who: #:chl.C.papa:date:19-FEB-1998 #:chl.C.papa:auth:. #:chl.C.papa:title:disease #:chl.C.papa:rem:ref:1 (bases 1 to 1563) #:chl.C.papa:rem:ref:2 (bases 1 to 1563) #:chl.C.papa:rem:auth:Ying,Z. and Davis,M.J. #:chl.C.papa:rem:jour:Submitted (01-NOV-1996) Tropical Research and Education #:chl.C.papa:rem:: Center, University of Florida, 18905 SW 280 Street, #:chl.C.papa:rem:: Homestead, FL 33031, USA #:chl.C.papa:rem:title:Direct Submission #:chl.C.papa:rem:KEYWORDS:. #:chl.C.papa:rem:GenBank ACCESSION:U76911 #:chl.Cor.cr:name:Chloroplast Corynaea crassa. #:chl.Cor.cr:subsp: #:chl.Cor.cr:strain: #:chl.Cor.cr:atcc: #:chl.Cor.cr:acs:U67744 #:chl.Cor.cr:auth:Nickrent,D.L., Duff,R.J. and Konings,D.A.M. #:chl.Cor.cr:title:holoparasitic angiosperms #:chl.Cor.cr:jour:Unpublished #:chl.Cor.cr:who: #:chl.Cor.cr:date:21-AUG-1997 #:chl.Cor.cr:title:Structural analyses of plastid-encoded 16S rRNAs of #:chl.Cor.cr:rem:ref:1 (bases 1 to 1114) #:chl.Cor.cr:rem:ref:2 (bases 1 to 1114) #:chl.Cor.cr:rem:auth:Nickrent,D.L. and Duff,R.J. #:chl.Cor.cr:rem:jour:Submitted (22-AUG-1996) Plant Biology, Southern Illinois #:chl.Cor.cr:rem:: University, Carbondale, IL 62901, USA #:chl.Cor.cr:rem:title:Direct Submission #:chl.Cor.cr:rem:KEYWORDS:. #:chl.Cor.cr:rem:GenBank ACCESSION:U67744 #:chl.C.cocc:name:Cynomorium coccineum #:chl.C.cocc:subsp: #:chl.C.cocc:strain: #:chl.C.cocc:atcc: #:chl.C.cocc:acs:U67743 #:chl.C.cocc:auth: #:chl.C.cocc:title: #:chl.C.cocc:jour: #:chl.C.cocc:who: #:chl.C.cocc:date: #:chl.C.cocc:rem:chl16sco.seq cynomorium coccineum #:chl.C.cocc:rem:; 1480 chl16sco. #:chl.C.cocc:rem:chl16sco. #:chl.C.rube:name:Cytinus ruber #:chl.C.rube:subsp: #:chl.C.rube:strain: #:chl.C.rube:atcc: #:chl.C.rube:acs:U47845 #:chl.C.rube:auth: #:chl.C.rube:title: #:chl.C.rube:jour: #:chl.C.rube:who: #:chl.C.rube:date: #:chl.C.rube:rem:chl16scr.seq cytinus ruber #:chl.C.rube:rem:; 1497 chl16scr. #:chl.C.rube:rem:chl16scr. #:chl.H.afri:name:Hydnora africana #:chl.H.afri:subsp: #:chl.H.afri:strain: #:chl.H.afri:atcc: #:chl.H.afri:acs:U67745 #:chl.H.afri:auth: #:chl.H.afri:title: #:chl.H.afri:jour: #:chl.H.afri:who: #:chl.H.afri:date: #:chl.H.afri:rem:chl16shy.seq hydnora africana #:chl.H.afri:rem:; 1504 chl16shy. #:chl.H.afri:rem:chl16shy. #:chl.M.yama:name:Mitrastema yamamotoi #:chl.M.yama:subsp: #:chl.M.yama:strain: #:chl.M.yama:atcc: #:chl.M.yama:acs:U67742 #:chl.M.yama:auth: #:chl.M.yama:title: #:chl.M.yama:jour: #:chl.M.yama:who: #:chl.M.yama:date: #:chl.M.yama:rem:chl16smy.seq mitrastema yamamotoi #:chl.M.yama:rem:; 1465 chl16smy. #:chl.M.yama:rem:chl16smy. #:chl.Bda.am:name:Chloroplast Bdallophyton americanum. #:chl.Bda.am:subsp: #:chl.Bda.am:strain: #:chl.Bda.am:atcc: #:chl.Bda.am:acs:U67740 #:chl.Bda.am:auth:Nickrent,D.L., Duff,R.J. and Konings,D.A.M. #:chl.Bda.am:title:Structural analyses of plastid-encoded 16S rRNAs of #:chl.Bda.am:jour:Unpublished #:chl.Bda.am:who: #:chl.Bda.am:date:21-AUG-1997 #:chl.Bda.am:title:holoparasitic angiosperms #:chl.Bda.am:rem:ref:1 (bases 1 to 1483) #:chl.Bda.am:rem:ref:2 (bases 1 to 1483) #:chl.Bda.am:rem:auth:Nickrent,D.L. and Duff,R.J. #:chl.Bda.am:rem:jour:Submitted (22-AUG-1996) Plant Biology, Southern Illinois #:chl.Bda.am:rem:: University, Carbondale, IL 62901, USA #:chl.Bda.am:rem:title:Direct Submission #:chl.Bda.am:rem:KEYWORDS:. #:chl.Bda.am:rem:GenBank ACCESSION:U67740 #:chl.Pil.th:name:Chloroplast Pilostyles thurberi. #:chl.Pil.th:subsp: #:chl.Pil.th:strain: #:chl.Pil.th:atcc: #:chl.Pil.th:acs:U67741 #:chl.Pil.th:auth:Nickrent,D.L., Duff,R.J. and Konings,D.A.M. #:chl.Pil.th:title:holoparasitic angiosperms #:chl.Pil.th:jour:Unpublished #:chl.Pil.th:who: #:chl.Pil.th:date:21-AUG-1997 #:chl.Pil.th:title:Structural analyses of plastid-encoded 16S rRNAs of #:chl.Pil.th:rem:ref:1 (bases 1 to 1464) #:chl.Pil.th:rem:ref:2 (bases 1 to 1464) #:chl.Pil.th:rem:auth:Nickrent,D.L. and Duff,R.J. #:chl.Pil.th:rem:jour:Submitted (22-AUG-1996) Plant Biology, Southern Illinois #:chl.Pil.th:rem:: University, Carbondale, IL 62901, USA #:chl.Pil.th:rem:title:Direct Submission #:chl.Pil.th:rem:KEYWORDS:. #:chl.Pil.th:rem:GenBank ACCESSION:U67741 #:(3)-strame:name: #:(3)-strame:subsp: #:(3)-strame:strain: #:(3)-strame:atcc: #:(3)-strame:acs:DIVIDER #:(3)-strame:auth: #:(3)-strame:title: #:(3)-strame:jour: #:(3)-strame:who:DAMBERGER, SIMON HEL,Porter B256,, #:(3)-strame:date:Thu Nov 17 08:53:47 1994 #:chl.O.si.1:name:Odontella sinensis #:chl.O.si.1:subsp: #:chl.O.si.1:strain: #:chl.O.si.1:atcc: #:chl.O.si.1:acs:Z67753 #:chl.O.si.1:auth: #:chl.O.si.1:title: #:chl.O.si.1:jour: #:chl.O.si.1:who: #:chl.O.si.1:date: #:chl.O.si.1:rem:LOCUS OSCHLPLXX 119704 bp DNA PLN 13-FEB-1996 #:chl.O.si.1:rem:DEFINITION O.sinensis chloroplast DNA, complete genome. #:chl.O.si.1:rem:ACCESSION Z67753 #:chl.O.si.1:rem:NID g1185127 #:chl.O.si.1:rem:KEYWORDS 16S ribosomal RNA; 16S rRNA gene; 23S ribosomal RNA; #:chl.O.si.1:rem: 23S rRNA gene; 30S ribosomal protein S10; #:chl.O.si.1:rem: 30S ribosomal protein S11; 30S ribosomal protein S12; #:chl.O.si.1:rem: 30S ribosomal protein S13; 30S ribosomal protein S14; #:chl.O.si.1:rem: 30S ribosomal protein S16; 30S ribosomal protein S17; #:chl.O.si.1:rem: 30S ribosomal protein S18; 30S ribosomal protein S19; #:chl.O.si.1:rem: 30S ribosomal protein S2; 30S ribosomal protein S20; #:chl.O.si.1:rem: 30S ribosomal protein S3; 30S ribosomal protein S4; #:chl.O.si.1:rem: 30S ribosomal protein S5; 30S ribosomal protein S6; #:chl.O.si.1:rem: 30S ribosomal protein S7; 30S ribosomal protein S8; #:chl.O.si.1:rem: 30S ribosomal protein S9; 50S ribosomal protein L1; #:chl.O.si.1:rem: 50S ribosomal protein L11; 50S ribosomal protein L12; #:chl.O.si.1:rem: 50S ribosomal protein L13; 50S ribosomal protein L14; #:chl.O.si.1:rem: 50S ribosomal protein L16; 50S ribosomal protein L18; #:chl.O.si.1:rem: 50S ribosomal protein L19; 50S ribosomal protein L2; #:chl.O.si.1:rem: 50S ribosomal protein L20; 50S ribosomal protein L21; #:chl.O.si.1:rem: 50S ribosomal protein L22; 50S ribosomal protein L23; #:chl.O.si.1:rem: 50S ribosomal protein L24; 50S ribosomal protein L27; #:chl.O.si.1:rem: 50S ribosomal protein L29; 50S ribosomal protein L3; #:chl.O.si.1:rem: 50S ribosomal protein L31; 50S ribosomal protein L32; #:chl.O.si.1:rem: 50S ribosomal protein L33; 50S ribosomal protein L34; #:chl.O.si.1:rem: 50S ribosomal protein L35; 50S ribosomal protein L36; #:chl.O.si.1:rem: 50S ribosomal protein L4; 50S ribosomal protein L5; #:chl.O.si.1:rem: 50S ribosomal protein L6; 5S ribosomal RNA; 5S rRNA gene; #:chl.O.si.1:rem: acp gene; acyl carrier protein; apocytochrome f; #:chl.O.si.1:rem: ATP synthase CF1; ATP synthase CFO; atpA gene; atpB gene; #:chl.O.si.1:rem: atpD gene; atpE gene; atpF gene; atpG gene; atpH gene; atpI gene; #:chl.O.si.1:rem: cfxQ gene; chaperonin; chlI gene; clp protease; clpC gene; #:chl.O.si.1:rem: complete genome; CP43 chlorophyll apoprotein; #:chl.O.si.1:rem: CP47 chlorophyll apoprotein; cytochrome b559; cytochrome b6; #:chl.O.si.1:rem: cytochrome b6/f complex; cytochrome c550; #:chl.O.si.1:rem: D1 reaction-center protein; D2 reaction-center protein; #:chl.O.si.1:rem: DNA-replication helicase; dnaB gene; dnaK gene; #:chl.O.si.1:rem: elongation factor tu; Fe-S polypeptide; ferredoxin; #:chl.O.si.1:rem: ferredoxin-binding protein II; groEL gene; orf 179; ORF 25; #:chl.O.si.1:rem: ORF 312; ORF 644; ORF113; ORF128; ORF148; ORF181; ORF204; ORF251; #:chl.O.si.1:rem: ORF263; ORF26a; ORF26b; ORF27; ORF29; ORF29a; ORF29b; ORF31; #:chl.O.si.1:rem: ORF319; ORF34; ORF355; ORF355 gene; ORF36; ORF380; ORF382; ORF41; #:chl.O.si.1:rem: ORF42; ORF44; ORF455; ORF46; ORF486; ORF497; ORF61; ORF64; ORF73; #:chl.O.si.1:rem: ORF74; ORF99; P700 apoprotein A1; P700 apoprotein A2; petA gene; #:chl.O.si.1:rem: petB gene; petD gene; petF gene; petG gene; petK gene; #:chl.O.si.1:rem: phosphoprotein; plastocyanin-binding; preprotein-translocase; #:chl.O.si.1:rem: protein I; protein J; protein K; protein L; protein M; protein N; #:chl.O.si.1:rem: protein T; protein W; protein X; psaA gene; psaB gene; psaC gene; #:chl.O.si.1:rem: psaD gene; psaE gene; psaF gene; psaI gene; psaJ gene; psaL gene; #:chl.O.si.1:rem: psaM gene; psbA gene; psbB gene; psbC gene; psbD gene; psbE gene; #:chl.O.si.1:rem: psbF gene; psbH gene; psbI gene; psbJ gene; psbK gene; psbL gene; #:chl.O.si.1:rem: psbN gene; psbT gene; psbV gene; psbW gene; psbX gene; PSI; PSII; #:chl.O.si.1:rem: rbcL gene; rbcR gene; rbcs gene; RNA polymerase; #:chl.O.si.1:rem: RNA polymerase b''-chain; RNA polymerase b'-chain; #:chl.O.si.1:rem: RNA polymerase b-chain; rpL1 gene; rpl11 gene; rpl12 gene; #:chl.O.si.1:rem: rpl13 gene; rpl14 gene; rpl16 gene; Rpl18 gene; rpL19 gene; #:chl.O.si.1:rem: rpl2 gene; rpl20 gene; rpl21 gene; rpl22 gene; rpl23 gene; #:chl.O.si.1:rem: rpl24 gene; rpl27 gene; rpL29 gene; rpL3 gene; rpL31 gene; #:chl.O.si.1:rem: rpl32 gene; rpl32' gene; rpl33 gene; rpL34 gene; rpl35 gene; #:chl.O.si.1:rem: rpl36 gene; rpL4 gene; rpl5 gene; rpl6 gene; rpoA gene; #:chl.O.si.1:rem: rpoB gene; rpoC1 gene; rpoC2 gene; rps10 gene; rps11 gene; #:chl.O.si.1:rem: rps12 gene; rps13 gene; rps14 gene; rps16 gene; rps17 gene; #:chl.O.si.1:rem: rps18 gene; rps19 gene; rps2 gene; rps20 gene; rps3 gene; #:chl.O.si.1:rem: rps4 gene; RPS5 gene; RPS6 gene; rps7 gene; rps8 gene; rps9 gene; #:chl.O.si.1:rem: rubisco large subunit; rubisco small subunit; secA gene; #:chl.O.si.1:rem: secY gene; thiG gene; trnA gene; tRNA-Ala; tRNA-Arg; tRNA-Asn; #:chl.O.si.1:rem: tRNA-Asp; tRNA-Cys; tRNA-fMet; tRNA-Gln; tRNA-Glu; tRNA-Gly; #:chl.O.si.1:rem: tRNA-His; tRNA-Ile; tRNA-Leu; tRNA-Lys; tRNA-Met; tRNA-Phe; #:chl.O.si.1:rem: tRNA-Pro; tRNA-Ser; tRNA-Thr; tRNA-Trp; tRNA-Tyr; tRNA-Val; #:chl.O.si.1:rem: trnC gene; trnD gene; trnE gene; trnF gene; trnfM gene; #:chl.O.si.1:rem: trnG gene; trnH gene; trnI gene; trnk gene; trnL gene; trnM gene; #:chl.O.si.1:rem: trnN gene; trnP gene; trnQ gene; trnR gene; trnS gene; trnT gene; #:chl.O.si.1:rem: trnV gene; trnW gene; trnY gene; trsE gene; tufA gene; #:chl.O.si.1:rem: ycf12 gene; ycf16 gene; ycf24 gene; ycf25 gene; ycf3 gene; #:chl.O.si.1:rem: ycf30 gene; ycf31 gene; ycf32 gene; ycf33 gene; ycf35 gene; #:chl.O.si.1:rem: ycf39 gene; ycf4 gene; ycf40 gene; ycf41 gene; ycf42 gene; #:chl.O.si.1:rem: ycf43 gene; ycf44 gene; ycf45 gene; ycf46 gene; ycf47 gene; #:chl.O.si.1:rem: ycf5 gene; ycf6 gene; ycf7 gene; ycf9 gene. #:chl.O.si.1:rem:SOURCE Odontella sinensis. #:chl.O.si.1:rem: ORGANISM Chloroplast Odontella sinensis #:chl.O.si.1:rem: Eukaryotae; mitochondrial eukaryotes; stramenopiles; #:chl.O.si.1:rem: Bacillariophyta; Coscinodiscophyceae; Biddulphiophycidae; #:chl.O.si.1:rem: Eupodiscales; Eupodiscaceae; Odontella. #:chl.O.si.1:rem:REFERENCE 1 (bases 1 to 119704) #:chl.O.si.1:rem: AUTHORS Kowallik,K.V. #:chl.O.si.1:rem: JOURNAL Unpublished #:chl.O.si.1:rem:REFERENCE 2 (bases 1 to 119704) #:chl.O.si.1:rem: AUTHORS Kowallik,K.V. #:chl.O.si.1:rem: TITLE Direct Submission #:chl.O.si.1:rem: JOURNAL Submitted (10-NOV-1995) K.V. Kowallik, Heinrich-Heine Universitaet #:chl.O.si.1:rem: Duesseldorf, Universitaetsstr. 1 Geb.26 13/02/46, D- 40225, #:chl.O.si.1:rem: Duesseldorf, FRG #:chl.O.si.1:rem:COMMENT #:chl.O.si.1:rem: NCBI gi: 1185127 #:chl.O.si.1:rem:FEATURES Location/Qualifiers #:chl.O.si.1:rem: source 1..119704 #:chl.O.si.1:rem: /organism="Odontella sinensis" #:chl.O.si.1:rem: /chloroplast #:chl.O.si.1:rem: misc_feature 1..7725 #:chl.O.si.1:rem: /note="IRa" #:chl.O.si.1:rem: tRNA 267..340 #:chl.O.si.1:rem: /gene="trnP" #:chl.O.si.1:rem: /product="tRNA-Pro (ugg)" #:chl.O.si.1:rem: CDS 478..1545 #:chl.O.si.1:rem: /gene="ORF355" #:chl.O.si.1:rem: /note="NCBI gi: 1185128" #:chl.O.si.1:rem: /codon_start=1 #:chl.O.si.1:rem: /db_xref="PID:g1185128" #:chl.O.si.1:rem: /translation="MGMSLQLLGINLRIKVILATSWLFENIAKVCGYPTKTLGMPIRT #:chl.O.si.1:rem: DVIPGYGLPIHQTRVPPFANPTTFLEAVFGNIPQPSTIEKFYYESPQDGYYNFYIPHY #:chl.O.si.1:rem: RNVVFLPDWLSKWIQLHFDLGIDTVGLETIRNTLFSMLVYFYFFAELRIMLSYFISIN #:chl.O.si.1:rem: PYTRPWVYLISLTDWIYDILFHLGISKRVVLLGFPLLPILIHAALGNLIDSLNHLVFT #:chl.O.si.1:rem: MPFLPSEGEPGEFLIDGTARKVLLFRYLPALWTSEPIPDRLREFWYTERPEIYQFMKK #:chl.O.si.1:rem: NYGHLDIDFLPDEILKQIYQFKHDQIDPNSLTKNVEQFKVLGAQLISDSTIDFYQFSN #:chl.O.si.1:rem: CFVHKQEILFTFFSDYMDRLI" #:chl.O.si.1:rem: rRNA 2210..3694 #:chl.O.si.1:rem: /gene="16S rRNA" #:chl.O.si.1:rem: /product="16S ribosomal RNA" #:chl.O.si.1:rem: tRNA 3761..3835 #:chl.O.si.1:rem: /gene="16S rRNA" #:chl.O.si.1:rem: /product="tRNA-Ile (gau)" #:chl.O.si.1:rem: tRNA 3838..3910 #:chl.O.si.1:rem: /gene="trnA" #:chl.O.si.1:rem: /product="tRNA-Ala (ugc)" #:chl.O.si.1:rem: rRNA 3976..6866 #:chl.O.si.1:rem: /gene="23S rRNA" #:chl.O.si.1:rem: /product="23S ribosomal RNA" #:chl.O.si.1:rem: rRNA 6938..7063 #:chl.O.si.1:rem: /gene="5S rRNA" #:chl.O.si.1:rem: /product="5S ribosomal RNA" #:chl.O.si.1:rem: CDS 7318..7428 #:chl.O.si.1:rem: /gene="ycf32" #:chl.O.si.1:rem: /note="NCBI gi: 1185129" #:chl.O.si.1:rem: /codon_start=1 #:chl.O.si.1:rem: /product="ORF36" #:chl.O.si.1:rem: /db_xref="PID:g1185129" #:chl.O.si.1:rem: /translation="MDSRLLVIAAPLLVAASWALFNIGRLAIQQIQRLSA" #:chl.O.si.1:rem: CDS 7563..7739 #:chl.O.si.1:rem: /gene="rpl32" #:chl.O.si.1:rem: /note="NCBI gi: 1185130" #:chl.O.si.1:rem: /codon_start=1 #:chl.O.si.1:rem: /product="50S ribosomal protein L32" #:chl.O.si.1:rem: /db_xref="PID:g1185130" #:chl.O.si.1:rem: /translation="MAVPKKRTSKAKKNARKSVWKKKADKAAKKSLSLAKSVLQGKTT #:chl.O.si.1:rem: SFVYSLYIDELFSI" #:chl.O.si.1:rem: CDS 7825..8073 #:chl.O.si.1:rem: /gene="psaC" #:chl.O.si.1:rem: /note="NCBI gi: 1185131" #:chl.O.si.1:rem: /codon_start=1 #:chl.O.si.1:rem: /product="PSI, Fe-S polypeptide SU VII, 9 kDa" #:chl.O.si.1:rem: /db_xref="PID:g1185131" #:chl.O.si.1:rem: /translation="MSHTVKIYDTCIGCTQCVRACPTDVLEMVPWDGCKSGQIASSPR #:chl.O.si.1:rem: VEDCVGCKRCETACPTDFLSVRVYLGRLETTRSLGLAY" #:chl.O.si.1:rem: CDS complement(8139..9077) #:chl.O.si.1:rem: /gene="ycf5" #:chl.O.si.1:rem: /note="NCBI gi: 1185132" #:chl.O.si.1:rem: /codon_start=1 #:chl.O.si.1:rem: /product="ORF312" #:chl.O.si.1:rem: /db_xref="PID:g1185132" #:chl.O.si.1:rem: /translation="MDWDIIQNLSSNLVFGILLFAMTIYWISLSFFKWTKNLSQVGKI #:chl.O.si.1:rem: SAIVANILLFFILGSRWIVAGYFPLSNLYESLLFLTWTLLTIYLYVEFKTKSKLVGAI #:chl.O.si.1:rem: LIPVALLINGFANLTLSVDMQKSSPLVPALQSNWLMLHVSMMMLSYGTLIMGSLLCIL #:chl.O.si.1:rem: FLVISKYQDIDLQILDESSLPLYNIMLDYYEAKLFSPSDEVSELGKLKLLQSLDNWSY #:chl.O.si.1:rem: RIIGLGFPFLTIGIIAGGVWANEAWGSYWSWDPKETWALITWIVFATYLHSRITKGWE #:chl.O.si.1:rem: GKKTAILGGLGFFVIWICYLGVNFLGKGLHSYGWLS" #:chl.O.si.1:rem: CDS 9287..9427 #:chl.O.si.1:rem: /gene="ycf32" #:chl.O.si.1:rem: /note="A+T-rich; NCBI gi: 1185133" #:chl.O.si.1:rem: /codon_start=1 #:chl.O.si.1:rem: /product="ORF46" #:chl.O.si.1:rem: /db_xref="PID:g1185133" #:chl.O.si.1:rem: /translation="MEKIKKSYLLVAKLKFKYFCLKPYSLNSTTKFILKIIKNKSMLI #:chl.O.si.1:rem: FN" #:chl.O.si.1:rem: CDS 9482..9772 #:chl.O.si.1:rem: /gene="rps6" #:chl.O.si.1:rem: /note="NCBI gi: 1185134" #:chl.O.si.1:rem: /codon_start=1 #:chl.O.si.1:rem: /product="30S ribosomal protein S6" #:chl.O.si.1:rem: /db_xref="PID:g1185134" #:chl.O.si.1:rem: /translation="MSATKKYEMMILLTEEFNDSELKTWAFNYAKALRKLSASEISVI #:chl.O.si.1:rem: SRGKRDLSYYINNQKKGNFIQINFSSMPKYVDNFSKNLKFDSNVLRFLILNK" #:chl.O.si.1:rem: tRNA 9852..9922 #:chl.O.si.1:rem: /gene="trnN" #:chl.O.si.1:rem: /product="tRNA-Asn (guu)" #:chl.O.si.1:rem: CDS 9944..10729 #:chl.O.si.1:rem: /gene="thiG" #:chl.O.si.1:rem: /note="NCBI gi: 1185135" #:chl.O.si.1:rem: /codon_start=1 #:chl.O.si.1:rem: /function="involved in thiamine biosynthesis" #:chl.O.si.1:rem: /db_xref="PID:g1185135" #:chl.O.si.1:rem: /translation="MINNSDTLKIGNKTFNSRLMLGSGKYRTIENAVNSIITSDCEIL #:chl.O.si.1:rem: TVAVRRLPTKLTNDNTSFLKSLDWNKLWLLPNTAGSQTAEEAIRMAFLGHELACQLGQ #:chl.O.si.1:rem: EDNFFVKLEVISDPKYLLPDPIGTLKAAEFLVKKGFTVLPYINADPMLALHLEDLGCA #:chl.O.si.1:rem: TVMPLGSPIGSGQGLNNISNLQIIIENSSIPVIIDAGIGTPSEAAKSMELGADGVLLN #:chl.O.si.1:rem: TAIAQAKTPEKMALAMKLAVEAGRLGYLAGRMEKNRMQVQVLH" #:chl.O.si.1:rem: CDS complement(10894..13551) #:chl.O.si.1:rem: /gene="clpC" #:chl.O.si.1:rem: /note="NCBI gi: 1185136" #:chl.O.si.1:rem: /codon_start=1 #:chl.O.si.1:rem: /product="caseinolytic-like Clp protease" #:chl.O.si.1:rem: /db_xref="PID:g1185136" #:chl.O.si.1:rem: /translation="MFEKFTEGAIKVIMLSQEEARRMGHNFVGTEQLLLGIIGQRHGI #:chl.O.si.1:rem: GARALKKQKVTLKKARREIELYIGRGTGFVASEIPFTPRAKRVLEMAVHEGKDLGQNF #:chl.O.si.1:rem: VGTEHILLALISESDGVAMRTLDKLGVNIPKLRNLILMYIEENQEEILRPLTQAEKFL #:chl.O.si.1:rem: LEREKKGSSTPTLDEYSENISKEAVDGKLDPVIGRDKEIHEVIKVLARRRKNNPVLIG #:chl.O.si.1:rem: EPGVGKTAVAEGLAQLIIAEKAPDFLDGNLLMALDLGSILAGTKYRGEFEERIKRIVE #:chl.O.si.1:rem: EVQNDSAIILVIDEIHTLVGAGAAEGAVDAANILKPALARGKFRCIGATTIDEYRKYI #:chl.O.si.1:rem: ERDPALERRFQPVHVKEPTVGVTIEILLGLRSKFEEHHTLSYHDKAVEQAAILADKFI #:chl.O.si.1:rem: ADRFLPDKAIDVLDEAGSRVRLENRRLPRGMKRLLKELQDTLRDKEESIKEHDFDIAK #:chl.O.si.1:rem: QLVDHEMEVRTHIRIMKQSILTNETLGLARKEIDTVLEGDVAEVIAGWTGIPVNKISD #:chl.O.si.1:rem: SESKRLLTMEETLHERLIGQHHAIVSVSKAIRRARVGLRNPDRPIASFIFAGPTGVGK #:chl.O.si.1:rem: TELTKALSEYMFGNEDSMIRLDMSEYMEKHTVAKLIGSPPGYVGYNEGGQLTEAVQTK #:chl.O.si.1:rem: PYSVVLLDEVEKAHPDVFNLLLQILDDGRLTDSKGRTIDFRNTMIIMTTNLGAKIIEK #:chl.O.si.1:rem: ESGIKPKTKQDKPAFRIDESGCLGWEPTPEPIKDSALFEKVTELVNEELKEFFRPEFL #:chl.O.si.1:rem: NRIDEIIVFNHLTKYDIWEICGLMVKQLQKRLEEKELTLEVDVSVRNLLTEEGYDPVY #:chl.O.si.1:rem: GARPLRRAVMRLLEDTLAQQCLSKPLYPGTILRVSRVKEEGTLASYTNDVKVEIDYRR #:chl.O.si.1:rem: VDPRLLEQAEEKKEQNQEETKQNILKTDA" #:chl.O.si.1:rem: tRNA 13780..13850 #:chl.O.si.1:rem: /gene="trnC" #:chl.O.si.1:rem: /product="tRNA-Cys (gca)" #:chl.O.si.1:rem: tRNA 13921..14006 #:chl.O.si.1:rem: /gene="trnL" #:chl.O.si.1:rem: /product="tRNA-Leu (uaa)" #:chl.O.si.1:rem: rRNA complement(47296..47421) #:chl.O.si.1:rem: /gene="trnR" #:chl.O.si.1:rem: /product="5S ribosomal RNA" #:chl.O.si.1:rem: rRNA complement(47493..50383) #:chl.O.si.1:rem: /gene="trnR" #:chl.O.si.1:rem: /product="23S ribosomal RNA" #:chl.O.si.1:rem: tRNA complement(50449..50521) #:chl.O.si.1:rem: /gene="trnR" #:chl.O.si.1:rem: /product="tRNA-Ala (ugc)" #:chl.O.si.1:rem: tRNA complement(50524..50598) #:chl.O.si.1:rem: /gene="trnR" #:chl.O.si.1:rem: /product="tRNA-Ile (gau)" #:chl.O.si.1:rem: rRNA complement(50665..52149) #:chl.O.si.1:rem: /gene="trnR" #:chl.O.si.1:rem: /product="16S ribosomal RNA" #:chl.O.si.1:rem: CDS complement(52814..53881) #:chl.O.si.1:rem: /gene="trnR" #:chl.O.si.1:rem: /note="NCBI gi: 1185184" #:chl.O.si.1:rem: /codon_start=1 #:chl.O.si.1:rem: /product="ORF355" #:chl.O.si.1:rem: /db_xref="PID:g1185184" #:chl.O.si.1:rem: /translation="MGMSLQLLGINLRIKVILATSWLFENIAKVCGYPTKTLGMPIRT #:chl.O.si.1:rem: DVIPGYGLPIHQTRVPPFANPTTFLEAVFGNIPQPSTIEKFYYESPQDGYYNFYIPHY #:chl.O.si.1:rem: RNVVFLPDWLSKWIQLHFDLGIDTVGLETIRNTLFSMLVYFYFFAELRIMLSYFISIN #:chl.O.si.1:rem: PYTRPWVYLISLTDWIYDILFHLGISKRVVLLGFPLLPILIHAALGNLIDSLNHLVFT #:chl.O.si.1:rem: MPFLPSEGEPGEFLIDGTARKVLLFRYLPALWTSEPIPDRLREFWYTERPEIYQFMKK #:chl.O.si.1:rem: NYGHLDIDFLPDEILKQIYQFKHDQIDPNSLTKNVEQFKVLGAQLISDSTIDFYQFSN #:chl.O.si.1:rem: CFVHKQEILFTFFSDYMDRLI" #:chl.O.si.1:rem: tRNA complement(54019..54092) #:chl.O.si.1:rem: /gene="trnR" #:chl.O.si.1:rem: /product="tRNA-Pro (ugg)" #:chl.O.si.1:rem:BASE COUNT 40523 a 19364 c 18721 g 41096 t #:chl.O.si.1:rem:ORIGIN #:chl.O.si.2:name: #:chl.O.si.2:subsp: #:chl.O.si.2:strain: #:chl.O.si.2:atcc: #:chl.O.si.2:acs:Z67753 #:chl.O.si.2:auth: #:chl.O.si.2:title: #:chl.O.si.2:jour: #:chl.O.si.2:who: #:chl.O.si.2:date: #:chl.O.si.2:rem:LOCUS OSCHLPLXX 119704 bp DNA PLN 13-FEB-1996 #:chl.O.si.2:rem:DEFINITION O.sinensis chloroplast DNA, complete genome. #:chl.O.si.2:rem:ACCESSION Z67753 #:chl.O.si.2:rem:NID g1185127 #:chl.O.si.2:rem:KEYWORDS 16S ribosomal RNA; 16S rRNA gene; 23S ribosomal RNA; #:chl.O.si.2:rem: 23S rRNA gene; 30S ribosomal protein S10; #:chl.O.si.2:rem: 30S ribosomal protein S11; 30S ribosomal protein S12; #:chl.O.si.2:rem: 30S ribosomal protein S13; 30S ribosomal protein S14; #:chl.O.si.2:rem: 30S ribosomal protein S16; 30S ribosomal protein S17; #:chl.O.si.2:rem: 30S ribosomal protein S18; 30S ribosomal protein S19; #:chl.O.si.2:rem: 30S ribosomal protein S2; 30S ribosomal protein S20; #:chl.O.si.2:rem: 30S ribosomal protein S3; 30S ribosomal protein S4; #:chl.O.si.2:rem: 30S ribosomal protein S5; 30S ribosomal protein S6; #:chl.O.si.2:rem: 30S ribosomal protein S7; 30S ribosomal protein S8; #:chl.O.si.2:rem: 30S ribosomal protein S9; 50S ribosomal protein L1; #:chl.O.si.2:rem: 50S ribosomal protein L11; 50S ribosomal protein L12; #:chl.O.si.2:rem: 50S ribosomal protein L13; 50S ribosomal protein L14; #:chl.O.si.2:rem: 50S ribosomal protein L16; 50S ribosomal protein L18; #:chl.O.si.2:rem: 50S ribosomal protein L19; 50S ribosomal protein L2; #:chl.O.si.2:rem: 50S ribosomal protein L20; 50S ribosomal protein L21; #:chl.O.si.2:rem: 50S ribosomal protein L22; 50S ribosomal protein L23; #:chl.O.si.2:rem: 50S ribosomal protein L24; 50S ribosomal protein L27; #:chl.O.si.2:rem: 50S ribosomal protein L29; 50S ribosomal protein L3; #:chl.O.si.2:rem: 50S ribosomal protein L31; 50S ribosomal protein L32; #:chl.O.si.2:rem: 50S ribosomal protein L33; 50S ribosomal protein L34; #:chl.O.si.2:rem: 50S ribosomal protein L35; 50S ribosomal protein L36; #:chl.O.si.2:rem: 50S ribosomal protein L4; 50S ribosomal protein L5; #:chl.O.si.2:rem: 50S ribosomal protein L6; 5S ribosomal RNA; 5S rRNA gene; #:chl.O.si.2:rem: acp gene; acyl carrier protein; apocytochrome f; #:chl.O.si.2:rem: ATP synthase CF1; ATP synthase CFO; atpA gene; atpB gene; #:chl.O.si.2:rem: atpD gene; atpE gene; atpF gene; atpG gene; atpH gene; atpI gene; #:chl.O.si.2:rem: cfxQ gene; chaperonin; chlI gene; clp protease; clpC gene; #:chl.O.si.2:rem: complete genome; CP43 chlorophyll apoprotein; #:chl.O.si.2:rem: CP47 chlorophyll apoprotein; cytochrome b559; cytochrome b6; #:chl.O.si.2:rem: cytochrome b6/f complex; cytochrome c550; #:chl.O.si.2:rem: D1 reaction-center protein; D2 reaction-center protein; #:chl.O.si.2:rem: DNA-replication helicase; dnaB gene; dnaK gene; #:chl.O.si.2:rem: elongation factor tu; Fe-S polypeptide; ferredoxin; #:chl.O.si.2:rem: ferredoxin-binding protein II; groEL gene; orf 179; ORF 25; #:chl.O.si.2:rem: ORF 312; ORF 644; ORF113; ORF128; ORF148; ORF181; ORF204; ORF251; #:chl.O.si.2:rem: ORF263; ORF26a; ORF26b; ORF27; ORF29; ORF29a; ORF29b; ORF31; #:chl.O.si.2:rem: ORF319; ORF34; ORF355; ORF355 gene; ORF36; ORF380; ORF382; ORF41; #:chl.O.si.2:rem: ORF42; ORF44; ORF455; ORF46; ORF486; ORF497; ORF61; ORF64; ORF73; #:chl.O.si.2:rem: ORF74; ORF99; P700 apoprotein A1; P700 apoprotein A2; petA gene; #:chl.O.si.2:rem: petB gene; petD gene; petF gene; petG gene; petK gene; #:chl.O.si.2:rem: phosphoprotein; plastocyanin-binding; preprotein-translocase; #:chl.O.si.2:rem: protein I; protein J; protein K; protein L; protein M; protein N; #:chl.O.si.2:rem: protein T; protein W; protein X; psaA gene; psaB gene; psaC gene; #:chl.O.si.2:rem: psaD gene; psaE gene; psaF gene; psaI gene; psaJ gene; psaL gene; #:chl.O.si.2:rem: psaM gene; psbA gene; psbB gene; psbC gene; psbD gene; psbE gene; #:chl.O.si.2:rem: psbF gene; psbH gene; psbI gene; psbJ gene; psbK gene; psbL gene; #:chl.O.si.2:rem: psbN gene; psbT gene; psbV gene; psbW gene; psbX gene; PSI; PSII; #:chl.O.si.2:rem: rbcL gene; rbcR gene; rbcs gene; RNA polymerase; #:chl.O.si.2:rem: RNA polymerase b''-chain; RNA polymerase b'-chain; #:chl.O.si.2:rem: RNA polymerase b-chain; rpL1 gene; rpl11 gene; rpl12 gene; #:chl.O.si.2:rem: rpl13 gene; rpl14 gene; rpl16 gene; Rpl18 gene; rpL19 gene; #:chl.O.si.2:rem: rpl2 gene; rpl20 gene; rpl21 gene; rpl22 gene; rpl23 gene; #:chl.O.si.2:rem: rpl24 gene; rpl27 gene; rpL29 gene; rpL3 gene; rpL31 gene; #:chl.O.si.2:rem: rpl32 gene; rpl32' gene; rpl33 gene; rpL34 gene; rpl35 gene; #:chl.O.si.2:rem: rpl36 gene; rpL4 gene; rpl5 gene; rpl6 gene; rpoA gene; #:chl.O.si.2:rem: rpoB gene; rpoC1 gene; rpoC2 gene; rps10 gene; rps11 gene; #:chl.O.si.2:rem: rps12 gene; rps13 gene; rps14 gene; rps16 gene; rps17 gene; #:chl.O.si.2:rem: rps18 gene; rps19 gene; rps2 gene; rps20 gene; rps3 gene; #:chl.O.si.2:rem: rps4 gene; RPS5 gene; RPS6 gene; rps7 gene; rps8 gene; rps9 gene; #:chl.O.si.2:rem: rubisco large subunit; rubisco small subunit; secA gene; #:chl.O.si.2:rem: secY gene; thiG gene; trnA gene; tRNA-Ala; tRNA-Arg; tRNA-Asn; #:chl.O.si.2:rem: tRNA-Asp; tRNA-Cys; tRNA-fMet; tRNA-Gln; tRNA-Glu; tRNA-Gly; #:chl.O.si.2:rem: tRNA-His; tRNA-Ile; tRNA-Leu; tRNA-Lys; tRNA-Met; tRNA-Phe; #:chl.O.si.2:rem: tRNA-Pro; tRNA-Ser; tRNA-Thr; tRNA-Trp; tRNA-Tyr; tRNA-Val; #:chl.O.si.2:rem: trnC gene; trnD gene; trnE gene; trnF gene; trnfM gene; #:chl.O.si.2:rem: trnG gene; trnH gene; trnI gene; trnk gene; trnL gene; trnM gene; #:chl.O.si.2:rem: trnN gene; trnP gene; trnQ gene; trnR gene; trnS gene; trnT gene; #:chl.O.si.2:rem: trnV gene; trnW gene; trnY gene; trsE gene; tufA gene; #:chl.O.si.2:rem: ycf12 gene; ycf16 gene; ycf24 gene; ycf25 gene; ycf3 gene; #:chl.O.si.2:rem: ycf30 gene; ycf31 gene; ycf32 gene; ycf33 gene; ycf35 gene; #:chl.O.si.2:rem: ycf39 gene; ycf4 gene; ycf40 gene; ycf41 gene; ycf42 gene; #:chl.O.si.2:rem: ycf43 gene; ycf44 gene; ycf45 gene; ycf46 gene; ycf47 gene; #:chl.O.si.2:rem: ycf5 gene; ycf6 gene; ycf7 gene; ycf9 gene. #:chl.O.si.2:rem:SOURCE Odontella sinensis. #:chl.O.si.2:rem: ORGANISM Chloroplast Odontella sinensis #:chl.O.si.2:rem: Eukaryotae; mitochondrial eukaryotes; stramenopiles; #:chl.O.si.2:rem: Bacillariophyta; Coscinodiscophyceae; Biddulphiophycidae; #:chl.O.si.2:rem: Eupodiscales; Eupodiscaceae; Odontella. #:chl.O.si.2:rem:REFERENCE 1 (bases 1 to 119704) #:chl.O.si.2:rem: AUTHORS Kowallik,K.V. #:chl.O.si.2:rem: JOURNAL Unpublished #:chl.O.si.2:rem:REFERENCE 2 (bases 1 to 119704) #:chl.O.si.2:rem: AUTHORS Kowallik,K.V. #:chl.O.si.2:rem: TITLE Direct Submission #:chl.O.si.2:rem: JOURNAL Submitted (10-NOV-1995) K.V. Kowallik, Heinrich-Heine Universitaet #:chl.O.si.2:rem: Duesseldorf, Universitaetsstr. 1 Geb.26 13/02/46, D- 40225, #:chl.O.si.2:rem: Duesseldorf, FRG #:chl.O.si.2:rem:COMMENT #:chl.O.si.2:rem: NCBI gi: 1185127 #:chl.O.si.2:rem:FEATURES Location/Qualifiers #:chl.O.si.2:rem: source 1..119704 #:chl.O.si.2:rem: /organism="Odontella sinensis" #:chl.O.si.2:rem: /chloroplast #:chl.O.si.2:rem: misc_feature 1..7725 #:chl.O.si.2:rem: /note="IRa" #:chl.O.si.2:rem: tRNA 267..340 #:chl.O.si.2:rem: /gene="trnP" #:chl.O.si.2:rem: /product="tRNA-Pro (ugg)" #:chl.O.si.2:rem: CDS 478..1545 #:chl.O.si.2:rem: /gene="ORF355" #:chl.O.si.2:rem: /note="NCBI gi: 1185128" #:chl.O.si.2:rem: /codon_start=1 #:chl.O.si.2:rem: /db_xref="PID:g1185128" #:chl.O.si.2:rem: /translation="MGMSLQLLGINLRIKVILATSWLFENIAKVCGYPTKTLGMPIRT #:chl.O.si.2:rem: DVIPGYGLPIHQTRVPPFANPTTFLEAVFGNIPQPSTIEKFYYESPQDGYYNFYIPHY #:chl.O.si.2:rem: RNVVFLPDWLSKWIQLHFDLGIDTVGLETIRNTLFSMLVYFYFFAELRIMLSYFISIN #:chl.O.si.2:rem: PYTRPWVYLISLTDWIYDILFHLGISKRVVLLGFPLLPILIHAALGNLIDSLNHLVFT #:chl.O.si.2:rem: MPFLPSEGEPGEFLIDGTARKVLLFRYLPALWTSEPIPDRLREFWYTERPEIYQFMKK #:chl.O.si.2:rem: NYGHLDIDFLPDEILKQIYQFKHDQIDPNSLTKNVEQFKVLGAQLISDSTIDFYQFSN #:chl.O.si.2:rem: CFVHKQEILFTFFSDYMDRLI" #:chl.O.si.2:rem: rRNA 2210..3694 #:chl.O.si.2:rem: /gene="16S rRNA" #:chl.O.si.2:rem: /product="16S ribosomal RNA" #:chl.O.si.2:rem: tRNA 3761..3835 #:chl.O.si.2:rem: /gene="16S rRNA" #:chl.O.si.2:rem: /product="tRNA-Ile (gau)" #:chl.O.si.2:rem: tRNA 3838..3910 #:chl.O.si.2:rem: /gene="trnA" #:chl.O.si.2:rem: /product="tRNA-Ala (ugc)" #:chl.O.si.2:rem: rRNA 3976..6866 #:chl.O.si.2:rem: /gene="23S rRNA" #:chl.O.si.2:rem: /product="23S ribosomal RNA" #:chl.O.si.2:rem: rRNA 6938..7063 #:chl.O.si.2:rem: /gene="5S rRNA" #:chl.O.si.2:rem: /product="5S ribosomal RNA" #:chl.O.si.2:rem: CDS 7318..7428 #:chl.O.si.2:rem: /gene="ycf32" #:chl.O.si.2:rem: /note="NCBI gi: 1185129" #:chl.O.si.2:rem: /codon_start=1 #:chl.O.si.2:rem: /product="ORF36" #:chl.O.si.2:rem: /db_xref="PID:g1185129" #:chl.O.si.2:rem: /translation="MDSRLLVIAAPLLVAASWALFNIGRLAIQQIQRLSA" #:chl.O.si.2:rem: CDS 7563..7739 #:chl.O.si.2:rem: /gene="rpl32" #:chl.O.si.2:rem: /note="NCBI gi: 1185130" #:chl.O.si.2:rem: /codon_start=1 #:chl.O.si.2:rem: /product="50S ribosomal protein L32" #:chl.O.si.2:rem: /db_xref="PID:g1185130" #:chl.O.si.2:rem: /translation="MAVPKKRTSKAKKNARKSVWKKKADKAAKKSLSLAKSVLQGKTT #:chl.O.si.2:rem: SFVYSLYIDELFSI" #:chl.O.si.2:rem: CDS 7825..8073 #:chl.O.si.2:rem: /gene="psaC" #:chl.O.si.2:rem: /note="NCBI gi: 1185131" #:chl.O.si.2:rem: /codon_start=1 #:chl.O.si.2:rem: /product="PSI, Fe-S polypeptide SU VII, 9 kDa" #:chl.O.si.2:rem: /db_xref="PID:g1185131" #:chl.O.si.2:rem: /translation="MSHTVKIYDTCIGCTQCVRACPTDVLEMVPWDGCKSGQIASSPR #:chl.O.si.2:rem: VEDCVGCKRCETACPTDFLSVRVYLGRLETTRSLGLAY" #:chl.O.si.2:rem: CDS complement(8139..9077) #:chl.O.si.2:rem: /gene="ycf5" #:chl.O.si.2:rem: /note="NCBI gi: 1185132" #:chl.O.si.2:rem: /codon_start=1 #:chl.O.si.2:rem: /product="ORF312" #:chl.O.si.2:rem: /db_xref="PID:g1185132" #:chl.O.si.2:rem: /translation="MDWDIIQNLSSNLVFGILLFAMTIYWISLSFFKWTKNLSQVGKI #:chl.O.si.2:rem: SAIVANILLFFILGSRWIVAGYFPLSNLYESLLFLTWTLLTIYLYVEFKTKSKLVGAI #:chl.O.si.2:rem: LIPVALLINGFANLTLSVDMQKSSPLVPALQSNWLMLHVSMMMLSYGTLIMGSLLCIL #:chl.O.si.2:rem: FLVISKYQDIDLQILDESSLPLYNIMLDYYEAKLFSPSDEVSELGKLKLLQSLDNWSY #:chl.O.si.2:rem: RIIGLGFPFLTIGIIAGGVWANEAWGSYWSWDPKETWALITWIVFATYLHSRITKGWE #:chl.O.si.2:rem: GKKTAILGGLGFFVIWICYLGVNFLGKGLHSYGWLS" #:chl.O.si.2:rem: CDS 9287..9427 #:chl.O.si.2:rem: /gene="ycf32" #:chl.O.si.2:rem: /note="A+T-rich; NCBI gi: 1185133" #:chl.O.si.2:rem: /codon_start=1 #:chl.O.si.2:rem: /product="ORF46" #:chl.O.si.2:rem: /db_xref="PID:g1185133" #:chl.O.si.2:rem: /translation="MEKIKKSYLLVAKLKFKYFCLKPYSLNSTTKFILKIIKNKSMLI #:chl.O.si.2:rem: FN" #:chl.O.si.2:rem: CDS 9482..9772 #:chl.O.si.2:rem: /gene="rps6" #:chl.O.si.2:rem: /note="NCBI gi: 1185134" #:chl.O.si.2:rem: /codon_start=1 #:chl.O.si.2:rem: /product="30S ribosomal protein S6" #:chl.O.si.2:rem: /db_xref="PID:g1185134" #:chl.O.si.2:rem: /translation="MSATKKYEMMILLTEEFNDSELKTWAFNYAKALRKLSASEISVI #:chl.O.si.2:rem: SRGKRDLSYYINNQKKGNFIQINFSSMPKYVDNFSKNLKFDSNVLRFLILNK" #:chl.O.si.2:rem: tRNA 9852..9922 #:chl.O.si.2:rem: /gene="trnN" #:chl.O.si.2:rem: /product="tRNA-Asn (guu)" #:chl.O.si.2:rem: CDS 9944..10729 #:chl.O.si.2:rem: /gene="thiG" #:chl.O.si.2:rem: /note="NCBI gi: 1185135" #:chl.O.si.2:rem: /codon_start=1 #:chl.O.si.2:rem: /function="involved in thiamine biosynthesis" #:chl.O.si.2:rem: /db_xref="PID:g1185135" #:chl.O.si.2:rem: /translation="MINNSDTLKIGNKTFNSRLMLGSGKYRTIENAVNSIITSDCEIL #:chl.O.si.2:rem: TVAVRRLPTKLTNDNTSFLKSLDWNKLWLLPNTAGSQTAEEAIRMAFLGHELACQLGQ #:chl.O.si.2:rem: EDNFFVKLEVISDPKYLLPDPIGTLKAAEFLVKKGFTVLPYINADPMLALHLEDLGCA #:chl.O.si.2:rem: TVMPLGSPIGSGQGLNNISNLQIIIENSSIPVIIDAGIGTPSEAAKSMELGADGVLLN #:chl.O.si.2:rem: TAIAQAKTPEKMALAMKLAVEAGRLGYLAGRMEKNRMQVQVLH" #:chl.O.si.2:rem: CDS complement(10894..13551) #:chl.O.si.2:rem: /gene="clpC" #:chl.O.si.2:rem: /note="NCBI gi: 1185136" #:chl.O.si.2:rem: /codon_start=1 #:chl.O.si.2:rem: /product="caseinolytic-like Clp protease" #:chl.O.si.2:rem: /db_xref="PID:g1185136" #:chl.O.si.2:rem: /translation="MFEKFTEGAIKVIMLSQEEARRMGHNFVGTEQLLLGIIGQRHGI #:chl.O.si.2:rem: GARALKKQKVTLKKARREIELYIGRGTGFVASEIPFTPRAKRVLEMAVHEGKDLGQNF #:chl.O.si.2:rem: VGTEHILLALISESDGVAMRTLDKLGVNIPKLRNLILMYIEENQEEILRPLTQAEKFL #:chl.O.si.2:rem: LEREKKGSSTPTLDEYSENISKEAVDGKLDPVIGRDKEIHEVIKVLARRRKNNPVLIG #:chl.O.si.2:rem: EPGVGKTAVAEGLAQLIIAEKAPDFLDGNLLMALDLGSILAGTKYRGEFEERIKRIVE #:chl.O.si.2:rem: EVQNDSAIILVIDEIHTLVGAGAAEGAVDAANILKPALARGKFRCIGATTIDEYRKYI #:chl.O.si.2:rem: ERDPALERRFQPVHVKEPTVGVTIEILLGLRSKFEEHHTLSYHDKAVEQAAILADKFI #:chl.O.si.2:rem: ADRFLPDKAIDVLDEAGSRVRLENRRLPRGMKRLLKELQDTLRDKEESIKEHDFDIAK #:chl.O.si.2:rem: QLVDHEMEVRTHIRIMKQSILTNETLGLARKEIDTVLEGDVAEVIAGWTGIPVNKISD #:chl.O.si.2:rem: SESKRLLTMEETLHERLIGQHHAIVSVSKAIRRARVGLRNPDRPIASFIFAGPTGVGK #:chl.O.si.2:rem: TELTKALSEYMFGNEDSMIRLDMSEYMEKHTVAKLIGSPPGYVGYNEGGQLTEAVQTK #:chl.O.si.2:rem: PYSVVLLDEVEKAHPDVFNLLLQILDDGRLTDSKGRTIDFRNTMIIMTTNLGAKIIEK #:chl.O.si.2:rem: ESGIKPKTKQDKPAFRIDESGCLGWEPTPEPIKDSALFEKVTELVNEELKEFFRPEFL #:chl.O.si.2:rem: NRIDEIIVFNHLTKYDIWEICGLMVKQLQKRLEEKELTLEVDVSVRNLLTEEGYDPVY #:chl.O.si.2:rem: GARPLRRAVMRLLEDTLAQQCLSKPLYPGTILRVSRVKEEGTLASYTNDVKVEIDYRR #:chl.O.si.2:rem: VDPRLLEQAEEKKEQNQEETKQNILKTDA" #:chl.O.si.2:rem: tRNA 13780..13850 #:chl.O.si.2:rem: /gene="trnC" #:chl.O.si.2:rem: /product="tRNA-Cys (gca)" #:chl.O.si.2:rem: tRNA 13921..14006 #:chl.O.si.2:rem: /gene="trnL" #:chl.O.si.2:rem: /product="tRNA-Leu (uaa)" #:chl.O.si.2:rem: rRNA complement(47296..47421) #:chl.O.si.2:rem: /gene="trnR" #:chl.O.si.2:rem: /product="5S ribosomal RNA" #:chl.O.si.2:rem: rRNA complement(47493..50383) #:chl.O.si.2:rem: /gene="trnR" #:chl.O.si.2:rem: /product="23S ribosomal RNA" #:chl.O.si.2:rem: tRNA complement(50449..50521) #:chl.O.si.2:rem: /gene="trnR" #:chl.O.si.2:rem: /product="tRNA-Ala (ugc)" #:chl.O.si.2:rem: tRNA complement(50524..50598) #:chl.O.si.2:rem: /gene="trnR" #:chl.O.si.2:rem: /product="tRNA-Ile (gau)" #:chl.O.si.2:rem: rRNA complement(50665..52149) #:chl.O.si.2:rem: /gene="trnR" #:chl.O.si.2:rem: /product="16S ribosomal RNA" #:chl.O.si.2:rem: CDS complement(52814..53881) #:chl.O.si.2:rem: /gene="trnR" #:chl.O.si.2:rem: /note="NCBI gi: 1185184" #:chl.O.si.2:rem: /codon_start=1 #:chl.O.si.2:rem: /product="ORF355" #:chl.O.si.2:rem: /db_xref="PID:g1185184" #:chl.O.si.2:rem: /translation="MGMSLQLLGINLRIKVILATSWLFENIAKVCGYPTKTLGMPIRT #:chl.O.si.2:rem: DVIPGYGLPIHQTRVPPFANPTTFLEAVFGNIPQPSTIEKFYYESPQDGYYNFYIPHY #:chl.O.si.2:rem: RNVVFLPDWLSKWIQLHFDLGIDTVGLETIRNTLFSMLVYFYFFAELRIMLSYFISIN #:chl.O.si.2:rem: PYTRPWVYLISLTDWIYDILFHLGISKRVVLLGFPLLPILIHAALGNLIDSLNHLVFT #:chl.O.si.2:rem: MPFLPSEGEPGEFLIDGTARKVLLFRYLPALWTSEPIPDRLREFWYTERPEIYQFMKK #:chl.O.si.2:rem: NYGHLDIDFLPDEILKQIYQFKHDQIDPNSLTKNVEQFKVLGAQLISDSTIDFYQFSN #:chl.O.si.2:rem: CFVHKQEILFTFFSDYMDRLI" #:chl.O.si.2:rem: tRNA complement(54019..54092) #:chl.O.si.2:rem: /gene="trnR" #:chl.O.si.2:rem: /product="tRNA-Pro (ugg)" #:chl.O.si.2:rem:BASE COUNT 40523 a 19364 c 18721 g 41096 t #:chl.O.si.2:rem:ORIGIN #:chl.S.pseu:name:Skeletonema pseudocostatum #:chl.S.pseu:subsp: #:chl.S.pseu:strain: #:chl.S.pseu:atcc: #:chl.S.pseu:acs:X82155 #:chl.S.pseu:auth: #:chl.S.pseu:title: #:chl.S.pseu:jour: #:chl.S.pseu:who: #:chl.S.pseu:date: #:chl.S.pseu:rem:LOCUS skelpseu 1486BP (?1495 BP) #:chl.S.pseu:rem:DEFINITION skelpseudocostatum skel 76 cpDNA #:chl.S.pseu:rem:ORIGIN #:chl.O.dani:name:Ochromonas danica #:chl.O.dani:subsp: #:chl.O.dani:strain: #:chl.O.dani:atcc: #:chl.O.dani:acs:X53183 #:chl.O.dani:auth: #:chl.O.dani:title: #:chl.O.dani:jour: #:chl.O.dani:who: #:chl.O.dani:date: #:chl.O.dani:rem:ID CHOD16S standard; RNA; ORG; 1300 BP. #:chl.O.dani:rem:XX #:chl.O.dani:rem:AC X53183; #:chl.O.dani:rem:XX #:chl.O.dani:rem:DT 24-MAY-1990 (molec_type corrected) #:chl.O.dani:rem:DT 24-MAY-1990 (annotation) #:chl.O.dani:rem:XX #:chl.O.dani:rem:DE Ochromonas danica chrysoplast 16S rRNA (part.) #:chl.O.dani:rem:XX #:chl.O.dani:rem:KW 16S ribosomal RNA; ribosomal RNA. #:chl.O.dani:rem:XX #:chl.O.dani:rem:OS Chloroplast Ochromonas danica #:chl.O.dani:rem:OC Chloroplastidae; Chrysophyceae. #:chl.O.dani:rem:XX #:chl.O.dani:rem:RN [1] (bases 1-1300) #:chl.O.dani:rem:RA Stackebrandt E.; #:chl.O.dani:rem:RT ; #:chl.O.dani:rem:RL Submitted (09-MAY-1990) on tape to the EMBL Data Library by: #:chl.O.dani:rem:RL Stackebrandt E__ #:chl.O.dani:rem:XX #:chl.O.dani:rem:RN [2] (bases 1-1300) #:chl.O.dani:rem:RA Witt D., Stackebrandt E.; #:chl.O.dani:rem:RT "Disproving the hypothesis of a common ancestry for the Ochromonas #:chl.O.dani:rem:RT danica chrysoplast and Heliobacterium chlorum"; #:chl.O.dani:rem:RL Arch. Microbiol. 150:244-248(1988). #:chl.O.dani:rem:XX #:chl.O.dani:rem:CC *source:strain=SAG 933-7. #:chl.O.dani:rem:XX #:chl.O.dani:rem:FH Key From To Description #:chl.O.dani:rem:FH #:chl.O.dani:rem:FT RRNA <1 >1300 16S rRNA #:chl.O.dani:rem:XX #:chl.O.dani:rem:SQ Sequence 1300 BP; 370 A; 238 C; 341 G; 299 T; 52 other; #:chl.P.litt:name:Pilayella littoralis #:chl.P.litt:subsp: #:chl.P.litt:strain: #:chl.P.litt:atcc: #:chl.P.litt:acs:X14873 #:chl.P.litt:auth: #:chl.P.litt:title: #:chl.P.litt:jour: #:chl.P.litt:who:Robin Gutell #:chl.P.litt:date:Sun Aug 13 19:13:33 1989 #:chl.P.litt:rem:was Pylaiella #:chl.H.akas:name:chloroplast Heterosigma akashiwo #:chl.H.akas:subsp:was chloroplast Olisthodiscus luteus #:chl.H.akas:strain: #:chl.H.akas:atcc: #:chl.H.akas:acs:M82860,M34370 #:chl.H.akas:auth: #:chl.H.akas:title: #:chl.H.akas:jour: #:chl.H.akas:who: #:chl.H.akas:date: #:chl.H.akas:rem:LOCUS OLICP16S 1537 bp ds-DNA ORG 19-NOV-1991 #:chl.H.akas:rem:DEFINITION Chloroplast Olisthodiscus luteus 16S ribosomal RNA (16S rRNA) gene #:chl.H.akas:rem: sequence. #:chl.H.akas:rem:ACCESSION M82860 M34370 #:chl.H.akas:rem:KEYWORDS 16S ribosomal RNA. #:chl.H.akas:rem:SOURCE Chloroplast Olisthodiscus luteus (chromosome Chloroplast #:chl.H.akas:rem: Olisthodiscus luteus) DNA. #:chl.H.akas:rem: ORGANISM Chloroplast Olisthodiscus luteus #:chl.H.akas:rem: Eukaryota; Fungi; Chromophycota; Chrysophyceae; Chrysophycidae. #:chl.H.akas:rem:REFERENCE 1 (bases 1 to 1537) #:chl.H.akas:rem: AUTHORS Delaney,T.P. and Cattolico,R.A. #:chl.H.akas:rem: TITLE Sequence of chloroplast 16S ribosomal RNA from Olisthodiscus #:chl.H.akas:rem: luteus, as inferred from the gene sequence. Evolutionary #:chl.H.akas:rem: implications of discordant rRNA and Rubisco small subunit-based #:chl.H.akas:rem: phylogenies #:chl.H.akas:rem: JOURNAL Nucleic Acids Res. 19, 6328-6328 (1991) #:chl.H.akas:rem: STANDARD simple staff_entry #:chl.H.akas:rem:FEATURES Location/Qualifiers #:chl.H.akas:rem: rRNA 9..1528 #:chl.H.akas:rem: /product="16S ribosomal RNA" #:chl.H.akas:rem: /gene="16S rRNA" #:chl.H.akas:rem:BASE COUNT 434 a 304 c 421 g 378 t #:chl.H.akas:rem:ORIGIN #:(2)-Unclas:name:Unclassified Eukaryotes #:(2)-Unclas:subsp: #:(2)-Unclas:strain: #:(2)-Unclas:atcc: #:(2)-Unclas:acs:DIVIDER #:(2)-Unclas:auth: #:(2)-Unclas:title: #:(2)-Unclas:jour: #:(2)-Unclas:who:DAMBERGER, SIMON HEL,Porter B256,, #:(2)-Unclas:date:Thu Nov 17 08:53:47 1994 #:chl.OM283:name:Unidentified cryptomonad. #:chl.OM283:subsp: #:chl.OM283:strain: #:chl.OM283:atcc: #:chl.OM283:acs:U70724 #:chl.OM283:auth:Rappe,M.S., Kemp,P.F. and Giovannoni,S.J. #:chl.OM283:title:genes cloned from the continental shelf off Cape Hatteras, #:chl.OM283:jour:Limnol. Oceanog. (1998) In press #:chl.OM283:who: #:chl.OM283:date:22-DEC-1997 #:chl.OM283:title:North Carolina #:chl.OM283:title:Phylogenetic diversity of marine coastal picoplankton 16S DNA #:chl.OM283:rem:ref:1 (bases 1 to 1482) #:chl.OM283:rem:ref:2 (bases 1 to 1482) #:chl.OM283:rem:auth:Rappe,M.S., Kemp,P.F. and Giovannoni,S.J. #:chl.OM283:rem:jour:Submitted (13-SEP-1996) Dept. of Microbiology, Oregon State #:chl.OM283:rem:: University, Nash Hall 220, Corvallis, OR 97331-3804, USA #:chl.OM283:rem:title:Direct Submission #:chl.OM283:rem:KEYWORDS:. #:chl.OM283:rem:GenBank ACCESSION:U70724 #:chl.OM270:name:Unidentified eukaryote. #:chl.OM270:subsp: #:chl.OM270:strain: #:chl.OM270:atcc: #:chl.OM270:acs:U70723 #:chl.OM270:auth:Rappe,M.S., Kemp,P.F. and Giovannoni,S.J. #:chl.OM270:title:Phylogenetic diversity of marine coastal picoplankton 16S DNA #:chl.OM270:jour:Limnol. Oceanog. (1998) In press #:chl.OM270:who: #:chl.OM270:date:22-DEC-1997 #:chl.OM270:title:genes cloned from the continental shelf off Cape Hatteras, #:chl.OM270:title:North Carolina #:chl.OM270:rem:ref:1 (bases 1 to 1475) #:chl.OM270:rem:ref:2 (bases 1 to 1475) #:chl.OM270:rem:auth:Rappe,M.S., Kemp,P.F. and Giovannoni,S.J. #:chl.OM270:rem:jour:Submitted (13-SEP-1996) Dept. of Microbiology, Oregon State #:chl.OM270:rem:: University, Nash Hall 220, Corvallis, OR 97331-3804, USA #:chl.OM270:rem:title:Direct Submission #:chl.OM270:rem:KEYWORDS:. #:chl.OM270:rem:GenBank ACCESSION:U70723 #:chl.OM164:name:Unidentified eukaryote. #:chl.OM164:subsp: #:chl.OM164:strain: #:chl.OM164:atcc: #:chl.OM164:acs:U70721 #:chl.OM164:auth:Rappe,M.S., Kemp,P.F. and Giovannoni,S.J. #:chl.OM164:title:Phylogenetic diversity of marine coastal picoplankton 16S DNA #:chl.OM164:jour:Limnol. Oceanog. (1998) In press #:chl.OM164:who: #:chl.OM164:date:22-DEC-1997 #:chl.OM164:title:genes cloned from the continental shelf off Cape Hatteras, #:chl.OM164:title:North Carolina #:chl.OM164:rem:ref:1 (bases 1 to 1477) #:chl.OM164:rem:ref:2 (bases 1 to 1477) #:chl.OM164:rem:auth:Rappe,M.S., Kemp,P.F. and Giovannoni,S.J. #:chl.OM164:rem:jour:Submitted (13-SEP-1996) Dept. of Microbiology, Oregon State #:chl.OM164:rem:: University, Nash Hall 220, Corvallis, OR 97331-3804, USA #:chl.OM164:rem:title:Direct Submission #:chl.OM164:rem:KEYWORDS:. #:chl.OM164:rem:GenBank ACCESSION:U70721 #:chl.OM153:name:Unidentified haptophyte. #:chl.OM153:subsp: #:chl.OM153:strain: #:chl.OM153:atcc: #:chl.OM153:acs:U70720 #:chl.OM153:auth:Rappe,M.S., Kemp,P.F. and Giovannoni,S.J. #:chl.OM153:title:North Carolina #:chl.OM153:jour:Limnol. Oceanog. (1998) In press #:chl.OM153:who: #:chl.OM153:date:22-DEC-1997 #:chl.OM153:title:Phylogenetic diversity of marine coastal picoplankton 16S DNA #:chl.OM153:title:genes cloned from the continental shelf off Cape Hatteras, #:chl.OM153:rem:ref:1 (bases 1 to 1126) #:chl.OM153:rem:ref:2 (bases 1 to 1126) #:chl.OM153:rem:auth:Rappe,M.S., Kemp,P.F. and Giovannoni,S.J. #:chl.OM153:rem:jour:Submitted (13-SEP-1996) Dept. of Microbiology, Oregon State #:chl.OM153:rem:: University, Nash Hall 220, Corvallis, OR 97331-3804, USA #:chl.OM153:rem:title:Direct Submission #:chl.OM153:rem:KEYWORDS:. #:chl.OM153:rem:GenBank ACCESSION:U70720 #:chl.OM125:name:Unidentified haptophyte. #:chl.OM125:subsp: #:chl.OM125:strain: #:chl.OM125:atcc: #:chl.OM125:acs:U70719 #:chl.OM125:auth:Rappe,M.S., Kemp,P.F. and Giovannoni,S.J. #:chl.OM125:title:genes cloned from the continental shelf off Cape Hatteras, #:chl.OM125:jour:Limnol. Oceanog. (1998) In press #:chl.OM125:who: #:chl.OM125:date:22-DEC-1997 #:chl.OM125:title:North Carolina #:chl.OM125:title:Phylogenetic diversity of marine coastal picoplankton 16S DNA #:chl.OM125:rem:ref:1 (bases 1 to 1085) #:chl.OM125:rem:ref:2 (bases 1 to 1085) #:chl.OM125:rem:auth:Rappe,M.S., Kemp,P.F. and Giovannoni,S.J. #:chl.OM125:rem:jour:Submitted (13-SEP-1996) Dept. of Microbiology, Oregon State #:chl.OM125:rem:: University, Nash Hall 220, Corvallis, OR 97331-3804, USA #:chl.OM125:rem:title:Direct Submission #:chl.OM125:rem:KEYWORDS:. #:chl.OM125:rem:GenBank ACCESSION:U70719 #:chl.OM081:name:Unidentified eukaryote. #:chl.OM081:subsp: #:chl.OM081:strain: #:chl.OM081:atcc: #:chl.OM081:acs:U70717 #:chl.OM081:auth:Rappe,M.S., Kemp,P.F. and Giovannoni,S.J. #:chl.OM081:title:North Carolina #:chl.OM081:jour:Limnol. Oceanog. (1998) In press #:chl.OM081:who: #:chl.OM081:date:22-DEC-1997 #:chl.OM081:title:Phylogenetic diversity of marine coastal picoplankton 16S DNA #:chl.OM081:title:genes cloned from the continental shelf off Cape Hatteras, #:chl.OM081:rem:ref:1 (bases 1 to 1463) #:chl.OM081:rem:ref:2 (bases 1 to 1463) #:chl.OM081:rem:auth:Rappe,M.S., Kemp,P.F. and Giovannoni,S.J. #:chl.OM081:rem:jour:Submitted (13-SEP-1996) Dept. of Microbiology, Oregon State #:chl.OM081:rem:: University, Nash Hall 220, Corvallis, OR 97331-3804, USA #:chl.OM081:rem:title:Direct Submission #:chl.OM081:rem:KEYWORDS:. #:chl.OM081:rem:GenBank ACCESSION:U70717 #:chl.OM039:name:Unidentified prasinophyte. #:chl.OM039:subsp: #:chl.OM039:strain: #:chl.OM039:atcc: #:chl.OM039:acs:U70716 #:chl.OM039:auth:Rappe,M.S., Kemp,P.F. and Giovannoni,S.J. #:chl.OM039:title:North Carolina #:chl.OM039:jour:Limnol. Oceanog. (1998) In press #:chl.OM039:who: #:chl.OM039:date:22-DEC-1997 #:chl.OM039:title:Phylogenetic diversity of marine coastal picoplankton 16S DNA #:chl.OM039:title:genes cloned from the continental shelf off Cape Hatteras, #:chl.OM039:rem:ref:1 (bases 1 to 698) #:chl.OM039:rem:ref:2 (bases 1 to 698) #:chl.OM039:rem:auth:Rappe,M.S., Kemp,P.F. and Giovannoni,S.J. #:chl.OM039:rem:jour:Submitted (13-SEP-1996) Dept. of Microbiology, Oregon State #:chl.OM039:rem:: University, Nash Hall 220, Corvallis, OR 97331-3804, USA #:chl.OM039:rem:title:Direct Submission #:chl.OM039:rem:KEYWORDS:. #:chl.OM039:rem:GenBank ACCESSION:U70716 #:chl.OM005:name:Unidentified prasinophyte. #:chl.OM005:subsp: #:chl.OM005:strain: #:chl.OM005:atcc: #:chl.OM005:acs:U70715 #:chl.OM005:auth:Rappe,M.S., Kemp,P.F. and Giovannoni,S.J. #:chl.OM005:title:North Carolina #:chl.OM005:jour:Limnol. Oceanog. (1998) In press #:chl.OM005:who: #:chl.OM005:date:22-DEC-1997 #:chl.OM005:title:Phylogenetic diversity of marine coastal picoplankton 16S DNA #:chl.OM005:title:genes cloned from the continental shelf off Cape Hatteras, #:chl.OM005:rem:ref:1 (bases 1 to 1485) #:chl.OM005:rem:ref:2 (bases 1 to 1485) #:chl.OM005:rem:auth:Rappe,M.S., Kemp,P.F. and Giovannoni,S.J. #:chl.OM005:rem:jour:Submitted (13-SEP-1996) Dept. of Microbiology, Oregon State #:chl.OM005:rem:: University, Nash Hall 220, Corvallis, OR 97331-3804, USA #:chl.OM005:rem:title:Direct Submission #:chl.OM005:rem:KEYWORDS:. #:chl.OM005:rem:GenBank ACCESSION:U70715 #:chl.OM111:name:Unidentified prasinophyte. #:chl.OM111:subsp: #:chl.OM111:strain: #:chl.OM111:atcc: #:chl.OM111:acs:U70718 #:chl.OM111:auth:Rappe,M.S., Kemp,P.F. and Giovannoni,S.J. #:chl.OM111:title:Phylogenetic diversity of marine coastal picoplankton 16S DNA #:chl.OM111:jour:Limnol. Oceanog. (1998) In press #:chl.OM111:who: #:chl.OM111:date:22-DEC-1997 #:chl.OM111:title:genes cloned from the continental shelf off Cape Hatteras, #:chl.OM111:title:North Carolina #:chl.OM111:rem:ref:1 (bases 1 to 402) #:chl.OM111:rem:ref:2 (bases 1 to 402) #:chl.OM111:rem:auth:Rappe,M.S., Kemp,P.F. and Giovannoni,S.J. #:chl.OM111:rem:jour:Submitted (13-SEP-1996) Dept. of Microbiology, Oregon State #:chl.OM111:rem:: University, Nash Hall 220, Corvallis, OR 97331-3804, USA #:chl.OM111:rem:title:Direct Submission #:chl.OM111:rem:KEYWORDS:. #:chl.OM111:rem:GenBank ACCESSION:U70718 #:chl.OM255:name:Unidentified prasinophyte. #:chl.OM255:subsp: #:chl.OM255:strain: #:chl.OM255:atcc: #:chl.OM255:acs:U70722 #:chl.OM255:auth:Rappe,M.S., Kemp,P.F. and Giovannoni,S.J. #:chl.OM255:title:Phylogenetic diversity of marine coastal picoplankton 16S DNA #:chl.OM255:jour:Limnol. Oceanog. (1998) In press #:chl.OM255:who: #:chl.OM255:date:22-DEC-1997 #:chl.OM255:title:genes cloned from the continental shelf off Cape Hatteras, #:chl.OM255:title:North Carolina #:chl.OM255:rem:ref:1 (bases 1 to 412) #:chl.OM255:rem:ref:2 (bases 1 to 412) #:chl.OM255:rem:auth:Rappe,M.S., Kemp,P.F. and Giovannoni,S.J. #:chl.OM255:rem:jour:Submitted (13-SEP-1996) Dept. of Microbiology, Oregon State #:chl.OM255:rem:: University, Nash Hall 220, Corvallis, OR 97331-3804, USA #:chl.OM255:rem:title:Direct Submission #:chl.OM255:rem:KEYWORDS:. #:chl.OM255:rem:GenBank ACCESSION:U70722 #:chl.OM020:name:Chloroplast Unidentified eukaryote clone OM20. #:chl.OM020:subsp: #:chl.OM020:strain: #:chl.OM020:atcc: #:chl.OM020:acs:U32670 #:chl.OM020:auth:Rappe,M.S., Kemp,P.F. and Giovannoni,S.J. #:chl.OM020:title:Chromophyte plastid 16S ribosomal RNA genes found in a clone #:chl.OM020:jour:Unpublished (1995) #:chl.OM020:who: #:chl.OM020:date:05-OCT-1995 #:chl.OM020:title:library from Atlantic Ocean seawater #:chl.OM020:rem:ref:1 (bases 1 to 1474) #:chl.OM020:rem:ref:2 (bases 1 to 1474) #:chl.OM020:rem:auth:Rappe,M.S. and Giovannoni,S.J. #:chl.OM020:rem:jour:Submitted (31-JUL-1995) Michael S. Rappe, Microbiology #:chl.OM020:rem:: Department, Oregon State University, 222 Nash Hall, #:chl.OM020:rem:: Corvallis, OR 97331, USA #:chl.OM020:rem:title:Direct Submission #:chl.OM020:rem:KEYWORDS:. #:chl.OM020:rem:GenBank ACCESSION:U32670 #:chl.OM020:rem:NCBI gi: 1002747 #:chl.OM021:name:Chloroplast Unidentified eukaryote clone OM21. #:chl.OM021:subsp: #:chl.OM021:strain: #:chl.OM021:atcc: #:chl.OM021:acs:U32671 #:chl.OM021:auth:Rappe,M.S., Kemp,P.F. and Giovannoni,S.J. #:chl.OM021:title:Chromophyte plastid 16S ribosomal RNA genes found in a clone #:chl.OM021:jour:Unpublished (1995) #:chl.OM021:who: #:chl.OM021:date:05-OCT-1995 #:chl.OM021:title:library from Atlantic Ocean seawater #:chl.OM021:rem:ref:1 (bases 1 to 1473) #:chl.OM021:rem:ref:2 (bases 1 to 1473) #:chl.OM021:rem:auth:Rappe,M.S. and Giovannoni,S.J. #:chl.OM021:rem:jour:Submitted (31-JUL-1995) Michael S. Rappe, Microbiology #:chl.OM021:rem:: Department, Oregon State University, 222 Nash Hall, #:chl.OM021:rem:: Corvallis, OR 97331, USA #:chl.OM021:rem:title:Direct Submission #:chl.OM021:rem:KEYWORDS:. #:chl.OM021:rem:GenBank ACCESSION:U32671 #:chl.OM021:rem:NCBI gi: 1002748 #:chl.OM134:name:Chloroplast environmental clone OM134. #:chl.OM134:subsp: #:chl.OM134:strain: #:chl.OM134:atcc: #:chl.OM134:acs:AF001661 #:chl.OM134:auth:Rappe,M.S., Suzuki,M.T., Vergin,K. and Giovannoni,S.J. #:chl.OM134:title:Phylogenetic diversity of ultraplankton plastid SSU rRNA #:chl.OM134:jour:Unpublished #:chl.OM134:who: #:chl.OM134:date:02-AUG-1997 #:chl.OM134:title:genes recovered in environmental nucleic acid samples from #:chl.OM134:title:the Pacific and Atlantic coasts of the United States #:chl.OM134:rem:ref:1 (bases 1 to 750) #:chl.OM134:rem:ref:2 (bases 1 to 750) #:chl.OM134:rem:auth:Rappe,M.S. #:chl.OM134:rem:jour:Submitted (30-APR-1997) Microbiology, Oregon State #:chl.OM134:rem:: University, 220 Nash Hall, Corvallis, OR 97331, USA #:chl.OM134:rem:title:Direct Submission #:chl.OM134:rem:KEYWORDS:. #:chl.OM134:rem:GenBank ACCESSION:AF001661 #:chl.OCS020:name:Chloroplast environmental clone OCS20. #:chl.OCS020:subsp: #:chl.OCS020:strain: #:chl.OCS020:atcc: #:chl.OCS020:acs:AF001654 #:chl.OCS020:auth:Rappe,M.S., Suzuki,M.T., Vergin,K. and Giovannoni,S.J. #:chl.OCS020:title:Phylogenetic diversity of ultraplankton plastid SSU rRNA #:chl.OCS020:jour:Unpublished #:chl.OCS020:who: #:chl.OCS020:date:02-AUG-1997 #:chl.OCS020:title:genes recovered in environmental nucleic acid samples from #:chl.OCS020:title:the Pacific and Atlantic coasts of the United States #:chl.OCS020:rem:ref:1 (bases 1 to 1479) #:chl.OCS020:rem:ref:2 (bases 1 to 1479) #:chl.OCS020:rem:auth:Rappe,M.S. #:chl.OCS020:rem:jour:Submitted (30-APR-1997) Microbiology, Oregon State #:chl.OCS020:rem:: University, 220 Nash Hall, Corvallis, OR 97331, USA #:chl.OCS020:rem:title:Direct Submission #:chl.OCS020:rem:KEYWORDS:. #:chl.OCS020:rem:GenBank ACCESSION:AF001654 #:chl.OCS031:name:Chloroplast environmental clone OCS31. #:chl.OCS031:subsp: #:chl.OCS031:strain: #:chl.OCS031:atcc: #:chl.OCS031:acs:AF001655 #:chl.OCS031:auth:Rappe,M.S., Suzuki,M.T., Vergin,K. and Giovannoni,S.J. #:chl.OCS031:title:the Pacific and Atlantic coasts of the United States #:chl.OCS031:jour:Unpublished #:chl.OCS031:who: #:chl.OCS031:date:02-AUG-1997 #:chl.OCS031:title:Phylogenetic diversity of ultraplankton plastid SSU rRNA #:chl.OCS031:title:genes recovered in environmental nucleic acid samples from #:chl.OCS031:rem:ref:1 (bases 1 to 1472) #:chl.OCS031:rem:ref:2 (bases 1 to 1472) #:chl.OCS031:rem:auth:Rappe,M.S. #:chl.OCS031:rem:jour:Submitted (30-APR-1997) Microbiology, Oregon State #:chl.OCS031:rem:: University, 220 Nash Hall, Corvallis, OR 97331, USA #:chl.OCS031:rem:title:Direct Submission #:chl.OCS031:rem:KEYWORDS:. #:chl.OCS031:rem:GenBank ACCESSION:AF001655 #:chl.OCS050:name:Chloroplast environmental clone OCS50. #:chl.OCS050:subsp: #:chl.OCS050:strain: #:chl.OCS050:atcc: #:chl.OCS050:acs:AF001656 #:chl.OCS050:auth:Rappe,M.S., Suzuki,M.T., Vergin,K. and Giovannoni,S.J. #:chl.OCS050:title:Phylogenetic diversity of ultraplankton plastid SSU rRNA #:chl.OCS050:jour:Unpublished #:chl.OCS050:who: #:chl.OCS050:date:02-AUG-1997 #:chl.OCS050:title:genes recovered in environmental nucleic acid samples from #:chl.OCS050:title:the Pacific and Atlantic coasts of the United States #:chl.OCS050:rem:ref:1 (bases 1 to 956) #:chl.OCS050:rem:ref:2 (bases 1 to 956) #:chl.OCS050:rem:auth:Rappe,M.S. #:chl.OCS050:rem:jour:Submitted (30-APR-1997) Microbiology, Oregon State #:chl.OCS050:rem:: University, 220 Nash Hall, Corvallis, OR 97331, USA #:chl.OCS050:rem:title:Direct Submission #:chl.OCS050:rem:KEYWORDS:. #:chl.OCS050:rem:GenBank ACCESSION:AF001656 #:chl.OCS054:name:Chloroplast environmental clone OCS54. #:chl.OCS054:subsp: #:chl.OCS054:strain: #:chl.OCS054:atcc: #:chl.OCS054:acs:AF001657 #:chl.OCS054:auth:Rappe,M.S., Suzuki,M.T., Vergin,K. and Giovannoni,S.J. #:chl.OCS054:title:the Pacific and Atlantic coasts of the United States #:chl.OCS054:jour:Unpublished #:chl.OCS054:who: #:chl.OCS054:date:02-AUG-1997 #:chl.OCS054:title:Phylogenetic diversity of ultraplankton plastid SSU rRNA #:chl.OCS054:title:genes recovered in environmental nucleic acid samples from #:chl.OCS054:rem:ref:1 (bases 1 to 1478) #:chl.OCS054:rem:ref:2 (bases 1 to 1478) #:chl.OCS054:rem:auth:Rappe,M.S. #:chl.OCS054:rem:jour:Submitted (30-APR-1997) Microbiology, Oregon State #:chl.OCS054:rem:: University, 220 Nash Hall, Corvallis, OR 97331, USA #:chl.OCS054:rem:title:Direct Submission #:chl.OCS054:rem:KEYWORDS:. #:chl.OCS054:rem:GenBank ACCESSION:AF001657 #:chl.OCS056:name:Chloroplast environmental clone OCS56. #:chl.OCS056:subsp: #:chl.OCS056:strain: #:chl.OCS056:atcc: #:chl.OCS056:acs:AF001658 #:chl.OCS056:auth:Rappe,M.S., Suzuki,M.T., Vergin,K. and Giovannoni,S.J. #:chl.OCS056:title:Phylogenetic diversity of ultraplankton plastid SSU rRNA #:chl.OCS056:jour:Unpublished #:chl.OCS056:who: #:chl.OCS056:date:02-AUG-1997 #:chl.OCS056:title:genes recovered in environmental nucleic acid samples from #:chl.OCS056:title:the Pacific and Atlantic coasts of the United States #:chl.OCS056:rem:ref:1 (bases 1 to 554) #:chl.OCS056:rem:ref:2 (bases 1 to 554) #:chl.OCS056:rem:auth:Rappe,M.S. #:chl.OCS056:rem:jour:Submitted (30-APR-1997) Microbiology, Oregon State #:chl.OCS056:rem:: University, 220 Nash Hall, Corvallis, OR 97331, USA #:chl.OCS056:rem:title:Direct Submission #:chl.OCS056:rem:KEYWORDS:. #:chl.OCS056:rem:GenBank ACCESSION:AF001658 #:chl.OCS162:name:Chloroplast environmental clone OCS162. #:chl.OCS162:subsp: #:chl.OCS162:strain: #:chl.OCS162:atcc: #:chl.OCS162:acs:AF001659 #:chl.OCS162:auth:Rappe,M.S., Suzuki,M.T., Vergin,K. and Giovannoni,S.J. #:chl.OCS162:title:the Pacific and Atlantic coasts of the United States #:chl.OCS162:jour:Unpublished #:chl.OCS162:who: #:chl.OCS162:date:02-AUG-1997 #:chl.OCS162:title:Phylogenetic diversity of ultraplankton plastid SSU rRNA #:chl.OCS162:title:genes recovered in environmental nucleic acid samples from #:chl.OCS162:rem:ref:1 (bases 1 to 1490) #:chl.OCS162:rem:ref:2 (bases 1 to 1490) #:chl.OCS162:rem:auth:Rappe,M.S. #:chl.OCS162:rem:jour:Submitted (30-APR-1997) Microbiology, Oregon State #:chl.OCS162:rem:: University, 220 Nash Hall, Corvallis, OR 97331, USA #:chl.OCS162:rem:title:Direct Submission #:chl.OCS162:rem:KEYWORDS:. #:chl.OCS162:rem:GenBank ACCESSION:AF001659 #:chl.OCS182:name:Chloroplast environmental clone OCS182. #:chl.OCS182:subsp: #:chl.OCS182:strain: #:chl.OCS182:atcc: #:chl.OCS182:acs:AF001660 #:chl.OCS182:auth:Rappe,M.S., Suzuki,M.T., Vergin,K. and Giovannoni,S.J. #:chl.OCS182:title:the Pacific and Atlantic coasts of the United States #:chl.OCS182:jour:Unpublished #:chl.OCS182:who: #:chl.OCS182:date:02-AUG-1997 #:chl.OCS182:title:Phylogenetic diversity of ultraplankton plastid SSU rRNA #:chl.OCS182:title:genes recovered in environmental nucleic acid samples from #:chl.OCS182:rem:ref:1 (bases 1 to 1482) #:chl.OCS182:rem:ref:2 (bases 1 to 1482) #:chl.OCS182:rem:auth:Rappe,M.S. #:chl.OCS182:rem:jour:Submitted (30-APR-1997) Microbiology, Oregon State #:chl.OCS182:rem:: University, 220 Nash Hall, Corvallis, OR 97331, USA #:chl.OCS182:rem:title:Direct Submission #:chl.OCS182:rem:KEYWORDS:. #:chl.OCS182:rem:GenBank ACCESSION:AF001660 #:2.11.2.1.1:name:2.11.2.1.1 SKELETONEMA_SUBGROUP #:2.11.2.1.1:subsp: #:2.11.2.1.1:strain: #:2.11.2.1.1:atcc: #:2.11.2.1.1:acs:DIVIDER #:2.11.2.1.1:auth: #:2.11.2.1.1:title: #:2.11.2.1.1:jour: #:2.11.2.1.1:who:Brian Dean #:2.11.2.1.1:date:Sat Jan 9 11:46:11 1999 #:env.OM19:name:clone OM19. #:env.OM19:subsp: #:env.OM19:strain: #:env.OM19:atcc: #:env.OM19:acs:U32668|g1002745 #:env.OM19:auth:Rappe,M.S., Kemp,P.F. and Giovannoni,S.J. #:env.OM19:title:Chromophyte plastid 16S ribosomal RNA genes found in a clone #:env.OM19:jour:J. Phycol. 31, 979-988 (1995) #:env.OM19:who: #:env.OM19:date:02-JUL-1998 #:env.OM19:title:library from Atlantic Ocean seawater #:env.OM19:rem:ref:1 #:env.OM19:rem: #:env.OM22:name:clone OM22. #:env.OM22:subsp: #:env.OM22:strain: #:env.OM22:atcc: #:env.OM22:acs:U32669|g1002746 #:env.OM22:auth:Rappe,M.S., Kemp,P.F. and Giovannoni,S.J. #:env.OM22:title:Chromophyte plastid 16S ribosomal RNA genes found in a clone #:env.OM22:jour:J. Phycol. 31, 979-988 (1995) #:env.OM22:who: #:env.OM22:date:02-JUL-1998 #:env.OM22:title:library from Atlantic Ocean seawater #:env.OM22:rem:ref:1 #:env.OM22:rem: #:env.PAD32:name:unidentified soil #:env.PAD32:subsp: #:env.PAD32:strain: #:env.PAD32:atcc: #:env.PAD32:acs:D26219|g498421 #:env.PAD32:auth:Ueda,T. #:env.PAD32:title:Genetic diversity in soil bacteria #:env.PAD32:jour:Unpublished (1994) #:env.PAD32:who: #:env.PAD32:date:02-JUL-1998 #:env.PAD32:rem:ref:1 #:env.PAD32:rem:library_source= unidentified soil bacterium from paddy field #:env.PAD22:name:unidentified soil #:env.PAD22:subsp: #:env.PAD22:strain: #:env.PAD22:atcc: #:env.PAD22:acs:D26209|g498410 #:env.PAD22:auth:Ueda,T. #:env.PAD22:title:Genetic diversity in soil bacteria #:env.PAD22:jour:Unpublished (1994) #:env.PAD22:who: #:env.PAD22:date:02-JUL-1998 #:env.PAD22:rem:ref:1 #:env.PAD22:rem:library_source= unidentified soil bacterium from paddy field #:env.agg462:name:marine snow #:env.agg462:subsp: #:env.agg462:strain: #:env.agg462:atcc: #:env.agg462:acs:L10940|g482254 #:env.agg462:auth:Delong,E.F., Franks,D.G. and Alldredge,A.L. #:env.agg462:title:free-living marine bacterial assemblages #:env.agg462:jour:Limnol. Oceanog. 38, 924-934 (1993) #:env.agg462:who: #:env.agg462:date:02-JUL-1998 #:env.agg462:title:Phylogenetic diversity of aggregate-attached versus #:env.agg462:rem:ref:1 #:env.agg462:rem:library_source= marine snow associated #:env.agg56:name:marine snow #:env.agg56:subsp: #:env.agg56:strain: #:env.agg56:atcc: #:env.agg56:acs:L10941 #:env.agg56:auth:Delong,E.F., Franks,D.G. and Alldredge,A.L. #:env.agg56:title:bacterial assemblages #:env.agg56:jour:Limnol. Oceanog. 38, 924-934 (1993) #:env.agg56:who: #:env.agg56:date:02-JUL-1998 #:env.agg56:title:Diversity of aggregate-attached versus free-living marine #:env.agg56:rem:ref:1 #:env.agg56:rem:library_source= marine snow associated #:Sklt.cos_C:name:Skeletonema costatum #:Sklt.cos_C:subsp: #:Sklt.cos_C:strain:UBS-18 Univ. of British Columbia (centric diatom) -- #:Sklt.cos_C:atcc: #:Sklt.cos_C:acs:X82154|g886705 #:Sklt.cos_C:auth:Medlin,L.K., Cooper,A., Hill,C., Wrieden,S. and Wellbrock,U #:Sklt.cos_C:title:Phylogenetic position of the Chromista plastids based on #:Sklt.cos_C:jour:Curr. Genet. 28, 560-565 (1995) #:Sklt.cos_C:who: #:Sklt.cos_C:date:02-JUL-1998 #:Sklt.cos_C:strain:chloroplast #:Sklt.cos_C:auth:. #:Sklt.cos_C:title:small subunit rRNA coding regions #:Sklt.cos_C:rem:ref:1 #:Sklt.cos_C:rem: #:Sklt.cos_C:rem:Former RDP Sids: Sclt.cos_C #:Sklt.cos_C:rem:legacy_attribute= cultivar (Grev.) Cleve #:Sklt.cos_C:rem:common_name= centric diatom #:Sklt.cos_C:rem:isolate_name= UBS-18 Univ. of British Columbia #:2.11.2.1.2:name:2.11.2.1.2 EUGLENA_SUBGROUP #:2.11.2.1.2:subsp: #:2.11.2.1.2:strain: #:2.11.2.1.2:atcc: #:2.11.2.1.2:acs:DIVIDER #:2.11.2.1.2:auth: #:2.11.2.1.2:title: #:2.11.2.1.2:jour: #:2.11.2.1.2:who:Brian Dean #:2.11.2.1.2:date:Sat Jan 9 11:46:11 1999 #:Eugl.gr4_C:name:Euglena gracilis #:Eugl.gr4_C:subsp: #:Eugl.gr4_C:strain: #:Eugl.gr4_C:atcc: #:Eugl.gr4_C:acs:X70810 #:Eugl.gr4_C:auth:Orsat,B., Spielmann,A. and Stutz,E. #:Eugl.gr4_C:title:Complete sequence of Eugena gracilis chloroplast DNA #:Eugl.gr4_C:jour:Nucleic Acids Res. 21, 3537-3544 (1993) #:Eugl.gr4_C:who: #:Eugl.gr4_C:date:02-JUL-1998 #:Eugl.gr4_C:auth:Hallick,R.B., Hong,L., Drager,R.G., Favreau,M.R., Monfort,A., #:Eugl.gr4_C:rem:ref:1 #:Eugl.gr4_C:rem:legacy_attribute= rrn gene, extra #:Eugl.gr4_C:rem:common_name= euglenophycean alga #:Eugl.gr1_C:name:Euglena gracilis #:Eugl.gr1_C:subsp: #:Eugl.gr1_C:strain: #:Eugl.gr1_C:atcc: #:Eugl.gr1_C:acs:X70810 #:Eugl.gr1_C:auth:Orsat,B., Spielmann,A. and Stutz,E. #:Eugl.gr1_C:title:Complete sequence of Eugena gracilis chloroplast DNA #:Eugl.gr1_C:jour:Nucleic Acids Res. 21, 3537-3544 (1993) #:Eugl.gr1_C:who: #:Eugl.gr1_C:date:02-JUL-1998 #:Eugl.gr1_C:auth:Hallick,R.B., Hong,L., Drager,R.G., Favreau,M.R., Monfort,A., #:Eugl.gr1_C:rem:ref:1 #:Eugl.gr1_C:rem:operon= rrnA gene #:Eugl.gr1_C:rem:common_name= euglenophycean alga #:Eugl.gr2_C:name:Euglena gracilis #:Eugl.gr2_C:subsp: #:Eugl.gr2_C:strain: #:Eugl.gr2_C:atcc: #:Eugl.gr2_C:acs:X70810 #:Eugl.gr2_C:auth:Orsat,B., Spielmann,A. and Stutz,E. #:Eugl.gr2_C:title:Complete sequence of Eugena gracilis chloroplast DNA #:Eugl.gr2_C:jour:Nucleic Acids Res. 21, 3537-3544 (1993) #:Eugl.gr2_C:who: #:Eugl.gr2_C:date:02-JUL-1998 #:Eugl.gr2_C:auth:Hallick,R.B., Hong,L., Drager,R.G., Favreau,M.R., Monfort,A., #:Eugl.gr2_C:rem:ref:1 #:Eugl.gr2_C:rem:operon= rrnB gene #:Eugl.gr2_C:rem:common_name= euglenophycean alga #:Eugl.gr3_C:name:Euglena gracilis #:Eugl.gr3_C:subsp: #:Eugl.gr3_C:strain: #:Eugl.gr3_C:atcc: #:Eugl.gr3_C:acs:X70810 #:Eugl.gr3_C:auth:Orsat,B., Spielmann,A. and Stutz,E. #:Eugl.gr3_C:title:Complete sequence of Eugena gracilis chloroplast DNA #:Eugl.gr3_C:jour:Nucleic Acids Res. 21, 3537-3544 (1993) #:Eugl.gr3_C:who: #:Eugl.gr3_C:date:02-JUL-1998 #:Eugl.gr3_C:auth:Hallick,R.B., Hong,L., Drager,R.G., Favreau,M.R., Monfort,A., #:Eugl.gr3_C:rem:ref:1 #:Eugl.gr3_C:rem:operon= rrnC gene #:Eugl.gr3_C:rem:common_name= euglenophycean alga #:2.11.2.1.3:name:2.11.2.1.3 OCHROSPHAERA_SUBGROUP #:2.11.2.1.3:subsp: #:2.11.2.1.3:strain: #:2.11.2.1.3:atcc: #:2.11.2.1.3:acs:DIVIDER #:2.11.2.1.3:auth: #:2.11.2.1.3:title: #:2.11.2.1.3:jour: #:2.11.2.1.3:who:Brian Dean #:2.11.2.1.3:date:Sat Jan 9 11:46:11 1999 #:Ochs.nea_C:name:Ochrosphaera neapolitana #:Ochs.nea_C:subsp: #:Ochs.nea_C:strain: #:Ochs.nea_C:atcc: #:Ochs.nea_C:acs:X80390|g516142 #:Ochs.nea_C:auth:Huss,V.A.R. and Engel,H. #:Ochs.nea_C:title: #:Ochs.nea_C:jour:Unpublished (1994) #:Ochs.nea_C:who: #:Ochs.nea_C:date:02-JUL-1998 #:Ochs.nea_C:rem:ref:1 #:Ochs.nea_C:rem:common_name= haptophyte #:2.11.2.1.4:name:2.11.2.1.4 PYRENOMONAS_SUBGROUP #:2.11.2.1.4:subsp: #:2.11.2.1.4:strain: #:2.11.2.1.4:atcc: #:2.11.2.1.4:acs:DIVIDER #:2.11.2.1.4:auth: #:2.11.2.1.4:title: #:2.11.2.1.4:jour: #:2.11.2.1.4:who:Brian Dean #:2.11.2.1.4:date:Sat Jan 9 11:46:11 1999 #:Crpm.phi_C:name:Cryptomonas phi #:Crpm.phi_C:subsp: #:Crpm.phi_C:strain:F (2-flagellae cryptomonad) -- chloroplast #:Crpm.phi_C:atcc: #:Crpm.phi_C:acs:S73904 #:Crpm.phi_C:auth:Douglas,S.E. and Turner,S. #:Crpm.phi_C:title:cyanobacterium-like ancestor #:Crpm.phi_C:jour:J. Mol. Evol. 33, 267-273 (1991) #:Crpm.phi_C:who: #:Crpm.phi_C:date:02-JUL-1998 #:Crpm.phi_C:title:Molecular evidence for the origin of plastids from a #:Crpm.phi_C:rem:ref:1 #:Crpm.phi_C:rem:legacy_attribute= clone pBSc15.5 #:Crpm.phi_C:rem:common_name= 2-flagellae cryptomonad #:Crpm.phi_C:rem:isolate_name= F #:2.11.2.2:name:2.11.2.2 GREEN_PLANT_CHLOROPLASTS #:2.11.2.2:subsp: #:2.11.2.2:strain: #:2.11.2.2:atcc: #:2.11.2.2:acs:DIVIDER #:2.11.2.2:auth: #:2.11.2.2:title: #:2.11.2.2:jour: #:2.11.2.2:who:Brian Dean #:2.11.2.2:date:Sat Jan 9 11:46:11 1999 #:2.11.2.2.1:name:2.11.2.2.1 GREEN_ALGA_CHLOROPLASTS #:2.11.2.2.1:subsp: #:2.11.2.2.1:strain: #:2.11.2.2.1:atcc: #:2.11.2.2.1:acs:DIVIDER #:2.11.2.2.1:auth: #:2.11.2.2.1:title: #:2.11.2.2.1:jour: #:2.11.2.2.1:who:Brian Dean #:2.11.2.2.1:date:Sat Jan 9 11:46:11 1999 #:Pyrm.par_C:name:Pyramimonas parkeae #:Pyrm.par_C:subsp: #:Pyrm.par_C:strain:NIES 254 (green alga) -- chloroplast #:Pyrm.par_C:atcc: #:Pyrm.par_C:acs: #:Pyrm.par_C:auth:,H. #:Pyrm.par_C:title:Chlamydomonas parkeae (Chlorophyta): molecular phylogeny of #:Pyrm.par_C:jour:Eur. J. Phycol. 29, 213-217 (1994) #:Pyrm.par_C:who: #:Pyrm.par_C:date:02-JUL-1998 #:Pyrm.par_C:title:a green alga with a peculiar pigment composition #:Pyrm.par_C:auth:Kim,Y.-S., Oyaizu,H., Matsumoto,S., Watanabe,M.M. and Nozaki #:Pyrm.par_C:title:Chloroplast small-subunit ribosomal RNA gene sequence from #:Pyrm.par_C:rem:ref:1 #:Pyrm.par_C:rem:common_name= green alga #:Pyrm.par_C:rem:isolate_name= NIES 254 #:Pyrm.par_C:rem:NB: bases 181-221 not aligned #:Clmy.par_C:name:Chlamydomonas parkeae #:Clmy.par_C:subsp: #:Clmy.par_C:strain:NIES-440 (green alga) -- chloroplast #:Clmy.par_C:atcc: #:Clmy.par_C:acs: #:Clmy.par_C:auth:,H. #:Clmy.par_C:title:Chlamydomonas parkeae (Chlorophyta): molecular phylogeny of #:Clmy.par_C:jour:Eur. J. Phycol. 29, 213-217 (1994) #:Clmy.par_C:who: #:Clmy.par_C:date:02-JUL-1998 #:Clmy.par_C:title:a green alga with a peculiar pigment composition #:Clmy.par_C:auth:Kim,Y.-S., Oyaizu,H., Matsumoto,S., Watanabe,M.M. and Nozaki #:Clmy.par_C:title:Chloroplast small-subunit ribosomal RNA gene sequence from #:Clmy.par_C:rem:ref:1 #:Clmy.par_C:rem:common_name= green alga #:Clmy.par_C:rem:isolate_name= NIES-440 #:Yamg.uni_C:name:Yamagishiella unicocca #:Yamg.uni_C:subsp: #:Yamg.uni_C:strain:X-441 (green alga) -- chloroplast #:Yamg.uni_C:atcc: #:Yamg.uni_C:acs: #:Yamg.uni_C:auth:,H. #:Yamg.uni_C:title:Chlamydomonas parkeae (Chlorophyta): molecular phylogeny of #:Yamg.uni_C:jour:Eur. J. Phycol. 29, 213-217 (1994) #:Yamg.uni_C:who: #:Yamg.uni_C:date:02-JUL-1998 #:Yamg.uni_C:title:a green alga with a peculiar pigment composition #:Yamg.uni_C:auth:Kim,Y.-S., Oyaizu,H., Matsumoto,S., Watanabe,M.M. and Nozaki #:Yamg.uni_C:title:Chloroplast small-subunit ribosomal RNA gene sequence from #:Yamg.uni_C:rem:ref:1 #:Yamg.uni_C:rem:common_name= green alga #:Yamg.uni_C:rem:isolate_name= X-441 #:Gonm.pec_C:name:Gonium pectorale #:Gonm.pec_C:subsp: #:Gonm.pec_C:strain:NIES-468 (green alga) -- chloroplast #:Gonm.pec_C:atcc: #:Gonm.pec_C:acs: #:Gonm.pec_C:auth:,H. #:Gonm.pec_C:title:Chlamydomonas parkeae (Chlorophyta): molecular phylogeny of #:Gonm.pec_C:jour:Eur. J. Phycol. 29, 213-217 (1994) #:Gonm.pec_C:who: #:Gonm.pec_C:date:02-JUL-1998 #:Gonm.pec_C:title:a green alga with a peculiar pigment composition #:Gonm.pec_C:auth:Kim,Y.-S., Oyaizu,H., Matsumoto,S., Watanabe,M.M. and Nozaki #:Gonm.pec_C:title:Chloroplast small-subunit ribosomal RNA gene sequence from #:Gonm.pec_C:rem:ref:1 #:Gonm.pec_C:rem:common_name= green alga #:Gonm.pec_C:rem:isolate_name= NIES-468 #:2.11.2.2.2:name:2.11.2.2.2 CHAROPHYTA-EMBRYOPHYTA_CHLOROPLASTS #:2.11.2.2.2:subsp: #:2.11.2.2.2:strain: #:2.11.2.2.2:atcc: #:2.11.2.2.2:acs:DIVIDER #:2.11.2.2.2:auth: #:2.11.2.2.2:title: #:2.11.2.2.2:jour: #:2.11.2.2.2:who:Brian Dean #:2.11.2.2.2:date:Sat Jan 9 11:46:11 1999 #:Clst.ehr_C:name:Closterium ehrenbergii #:Clst.ehr_C:subsp: #:Clst.ehr_C:strain:NIES-228 (green alga) -- chloroplast #:Clst.ehr_C:atcc: #:Clst.ehr_C:acs: #:Clst.ehr_C:auth:,H. #:Clst.ehr_C:title:Chlamydomonas parkeae (Chlorophyta): molecular phylogeny of #:Clst.ehr_C:jour:Eur. J. Phycol. 29, 213-217 (1994) #:Clst.ehr_C:who: #:Clst.ehr_C:date:02-JUL-1998 #:Clst.ehr_C:title:a green alga with a peculiar pigment composition #:Clst.ehr_C:auth:Kim,Y.-S., Oyaizu,H., Matsumoto,S., Watanabe,M.M. and Nozaki #:Clst.ehr_C:title:Chloroplast small-subunit ribosomal RNA gene sequence from #:Clst.ehr_C:rem:ref:1 #:Clst.ehr_C:rem:common_name= green alga #:Clst.ehr_C:rem:isolate_name= NIES-228 #:Spgn.com_C:name:Sphagnum compactum #:Spgn.com_C:subsp: #:Spgn.com_C:strain: #:Spgn.com_C:atcc: #:Spgn.com_C:acs: #:Spgn.com_C:auth:Vilgalys,R. #:Spgn.com_C:title:Cladistic analysis of chloroplast-encoded 16S and 23S #:Spgn.com_C:jour:The Bryologist 95, 172-180 (1992) #:Spgn.com_C:who: #:Spgn.com_C:date:02-JUL-1998 #:Spgn.com_C:title:ribosomal RNA genes #:Spgn.com_C:auth:Mishler,B.D., Thrall,P.H., Hopple,J.S.,Jr., De Luna,E. and #:Spgn.com_C:title:A molecular approach to the phylogeny of Bryophytes: #:Spgn.com_C:rem:ref:1 #:Spgn.com_C:rem:legacy_attribute= date_source=5/9/89 #:Spgn.com_C:rem:geog_source= Durham Co., North Carolina #:Spgn.com_C:rem:common_name= bryophyte #:Polt.com_C:name:Polytrichum commune #:Polt.com_C:subsp: #:Polt.com_C:strain: #:Polt.com_C:atcc: #:Polt.com_C:acs: #:Polt.com_C:auth:Vilgalys,R. #:Polt.com_C:title:Cladistic analysis of chloroplast-encoded 16S and 23S #:Polt.com_C:jour:The Bryologist 95, 172-180 (1992) #:Polt.com_C:who: #:Polt.com_C:date:02-JUL-1998 #:Polt.com_C:title:ribosomal RNA genes #:Polt.com_C:auth:Mishler,B.D., Thrall,P.H., Hopple,J.S.,Jr., De Luna,E. and #:Polt.com_C:title:A molecular approach to the phylogeny of Bryophytes: #:Polt.com_C:rem:ref:1 #:Polt.com_C:rem:legacy_attribute= date_source=5/9/89 #:Polt.com_C:rem:common_name= moss #:Polt.com_C:rem:geog_source= Durham Co., North Carolina #:Thdm.del_C:name:Thuidium delicatulum #:Thdm.del_C:subsp: #:Thdm.del_C:strain: #:Thdm.del_C:atcc: #:Thdm.del_C:acs: #:Thdm.del_C:auth:Vilgalys,R. #:Thdm.del_C:title:Cladistic analysis of chloroplast-encoded 16S and 23S #:Thdm.del_C:jour:The Bryologist 95, 172-180 (1992) #:Thdm.del_C:who: #:Thdm.del_C:date:02-JUL-1998 #:Thdm.del_C:title:ribosomal RNA genes #:Thdm.del_C:auth:Mishler,B.D., Thrall,P.H., Hopple,J.S.,Jr., De Luna,E. and #:Thdm.del_C:title:A molecular approach to the phylogeny of Bryophytes: #:Thdm.del_C:rem:ref:1 #:Thdm.del_C:rem:legacy_attribute= date_source=11/18/88 #:Thdm.del_C:rem:common_name= mat-forming plant #:Thdm.del_C:rem:geog_source= McDowell Co., North Carolina #:Pisu.sat_C:name:Pisum sativum #:Pisu.sat_C:subsp: #:Pisu.sat_C:strain:Rosakrona (pea; garden pea) -- chloroplast #:Pisu.sat_C:atcc: #:Pisu.sat_C:acs:M16874|g343039 (bases 328 to 545) #:Pisu.sat_C:auth:Sun,E., Wu,B.-W. and Tewari,K.K. #:Pisu.sat_C:title:promoter #:Pisu.sat_C:jour:Mol. Cell. Biol. 9, 5650-5659 (1989) #:Pisu.sat_C:who: #:Pisu.sat_C:date:02-JUL-1998 #:Pisu.sat_C:title:In vitro analysis of the pea chloroplast 16S rRNA gene #:Pisu.sat_C:rem:ref:1 #:Pisu.sat_C:rem:ref:2 #:Pisu.sat_C:rem:auth:Shapiro,D.R. and Tewari,K.K. #:Pisu.sat_C:rem:jour:Plant Mol. Biol. 6, 1-12 (1986) #:Pisu.sat_C:rem:title:Nucleotide sequences of transfer RNA genes in the #:Pisu.sat_C:rem:: Pisum sativum chloroplast DNA #:Pisu.sat_C:rem:ref:3 #:Pisu.sat_C:rem:auth:Khanna,N.C., Lakhani,S. and Tewari,K.K. #:Pisu.sat_C:rem:title:Identification of the template binding polypeptide in #:Pisu.sat_C:rem:: the pea chloroplast transcriptional complex #:Pisu.sat_C:rem:ref:4 #:Pisu.sat_C:rem:auth:Sun,E., Shapiro,D.R., Wu,B.W. and Tewari,K.K. #:Pisu.sat_C:rem:jour:Plant Mol. Biol. 6, 429-439 (1986) #:Pisu.sat_C:rem:title:Specific in vitro transcription of 16S rRNA gene by #:Pisu.sat_C:rem:: pea chloroplast RNA polymerase #:Pisu.sat_C:rem:legacy_attribute= A prior version of this sequence was S81977 #:Pisu.sat_C:rem:in #:Pisu.sat_C:rem:Genbank release 75.0. #:Pisu.sat_C:rem:common_name= pea; garden pea #:Pisu.sat_C:rem:isolate_name= Rosakrona #:Pisu.sat_C:rem:NB: M16874 (328..>545), M16862 (328..>545), & M30826 (328. #:Pisu.sat_C:rem:.>545) #:Pisu.sat_C:rem:are identical. #:Epif.vir_C:name:Epifagus virginiana #:Epif.vir_C:subsp: #:Epif.vir_C:strain: #:Epif.vir_C:atcc: #:Epif.vir_C:acs:M81884 #:Epif.vir_C:auth:Wolfe,K.H., Katz-Downie,D.S., Morden,C.W. and Palmer,J.D. #:Epif.vir_C:title:parasitic plant: accelerated sequence evolution, altered, #:Epif.vir_C:jour:Plant Mol. Biol. 18, 1037-1048 (1992) #:Epif.vir_C:who: #:Epif.vir_C:date:02-JUL-1998 #:Epif.vir_C:title:promoter structure, and tRNA pseudogenes #:Epif.vir_C:title:Evolution of the plastid ribosomal RNA operon in a nongreen #:Epif.vir_C:rem:ref:1 #:Epif.vir_C:rem:ref:2 #:Epif.vir_C:rem:auth:Wolfe,K.H., Morden,C.W. and Palmer,J.D. #:Epif.vir_C:rem:jour:Proc. Natl. Acad. Sci. U.S.A. 89, 10648-10652 (1992) #:Epif.vir_C:rem:title:Function and evolution of a minimal plastid genome #:Epif.vir_C:rem:: from a nonphotosynthetic parasitic plant #:Epif.vir_C:rem:ref:3 #:Epif.vir_C:rem:auth:Wolfe,K.H., Morden,C.W., Ems,S.C. and Palmer,J.D. #:Epif.vir_C:rem:jour:J. Mol. Evol. 35, 304-317 (1992) #:Epif.vir_C:rem:title:Rapid evolution of the plastid translational apparatus #:Epif.vir_C:rem:: in a nonphotosynthetic plant: loss or accelerated #:Epif.vir_C:rem:: sequence evolution of tRNA and ribosomal protein genes #:Epif.vir_C:rem:common_name= beechdrops #:Epif.vir_C:rem:NB: seq. in GB# M81884 & X62099 differ by one base ('U') at #:Epif.vir_C:rem:3' #:Epif.vir_C:rem:end #:Epif.vir_C:rem:X62099 16S part is bases 1 to 610; 1976 to 4164 #:Nico.ta2_C:name:Nicotiana tabacum #:Nico.ta2_C:subsp: #:Nico.ta2_C:strain: #:Nico.ta2_C:atcc: #:Nico.ta2_C:acs:U12809|g559545 (bases 1 to 1324) #:Nico.ta2_C:auth:Zoubenko,O.V., Allison,L.A., Svab,Z. and Maliga,P. #:Nico.ta2_C:title:region of the tobacco plastid genome #:Nico.ta2_C:jour:Nucleic Acids Res. 22, 3819-3824 (1994) #:Nico.ta2_C:who: #:Nico.ta2_C:date:02-JUL-1998 #:Nico.ta2_C:title:Efficient targeting of foreign genes into the repeated #:Nico.ta2_C:rem:ref:1 #:Nico.ta2_C:rem: complement #:Nico.ta2_C:rem:legacy_attribute= Cloning vector pPRV1 #:Nico.ta2_C:rem:common_name= common tobacco; tobacco; American tobacco #:Nico.ta3_C:name:Nicotiana tabacum #:Nico.ta3_C:subsp: #:Nico.ta3_C:strain: #:Nico.ta3_C:atcc: #:Nico.ta3_C:acs:U12810|g559546 (bases 1 to 1324) #:Nico.ta3_C:auth:Zoubenko,O.V., Allison,L.A., Svab,Z. and Maliga,P. #:Nico.ta3_C:title:plastid genome #:Nico.ta3_C:jour:Nucleic Acids Res. 22, 3819-3824 (1994) #:Nico.ta3_C:who: #:Nico.ta3_C:date:02-JUL-1998 #:Nico.ta3_C:title:Efficient targeting of foreign genes into the tobacco #:Nico.ta3_C:rem:ref:1 #:Nico.ta3_C:rem: complement #:Nico.ta3_C:rem:legacy_attribute= Cloning vector pPRV100A #:Nico.ta3_C:rem:common_name= common tobacco; tobacco; American tobacco #:Nico.ta4_C:name:Nicotiana tabacum #:Nico.ta4_C:subsp: #:Nico.ta4_C:strain: #:Nico.ta4_C:atcc: #:Nico.ta4_C:acs:U12811|g559547 (bases 1 to 1324) #:Nico.ta4_C:auth:Zoubenko,O.V., Allison,L.A., Svab,Z. and Maliga,P. #:Nico.ta4_C:title:Efficient targeting of foreign genes into the tobacco #:Nico.ta4_C:jour:Nucleic Acids Res. 22, 3819-3824 (1994) #:Nico.ta4_C:who: #:Nico.ta4_C:date:02-JUL-1998 #:Nico.ta4_C:title:plastid genome #:Nico.ta4_C:rem:ref:1 #:Nico.ta4_C:rem: #:Nico.ta4_C:rem: complement #:Nico.ta4_C:rem:legacy_attribute= Cloning vector pPRV100B #:Nico.ta4_C:rem:common_name= common tobacco; tobacco; American tobacco #:Nico.ta5_C:name:Nicotiana tabacum #:Nico.ta5_C:subsp: #:Nico.ta5_C:strain: #:Nico.ta5_C:atcc: #:Nico.ta5_C:acs:U12812|g559548 (bases 1 to 1324) #:Nico.ta5_C:auth:Zoubenko,O.V., Allison,L.A., Svab,Z. and Maliga,P. #:Nico.ta5_C:title:plastid genome #:Nico.ta5_C:jour:Nucleic Acids Res. 22, 3819-3824 (1994) #:Nico.ta5_C:who: #:Nico.ta5_C:date:02-JUL-1998 #:Nico.ta5_C:title:Efficient targeting of foreign genes into the tobacco #:Nico.ta5_C:rem:ref:1 #:Nico.ta5_C:rem: complement #:Nico.ta5_C:rem:legacy_attribute= Cloning vector pPRV111A #:Nico.ta5_C:rem:common_name= common tobacco; tobacco; American tobacco #:Nico.ta6_C:name:Nicotiana tabacum #:Nico.ta6_C:subsp: #:Nico.ta6_C:strain: #:Nico.ta6_C:atcc: #:Nico.ta6_C:acs:U12813|g559550 (bases 1 to 1324) #:Nico.ta6_C:auth:Zoubenko,O.V., Allison,L.A., Svab,Z. and Maliga,P. #:Nico.ta6_C:title:plastid genome #:Nico.ta6_C:jour:Nucleic Acids Res. 22, 3819-3824 (1994) #:Nico.ta6_C:who: #:Nico.ta6_C:date:02-JUL-1998 #:Nico.ta6_C:title:Efficient targeting of foreign genes into the tobacco #:Nico.ta6_C:rem:ref:1 #:Nico.ta6_C:rem: complement #:Nico.ta6_C:rem:legacy_attribute= Cloning vector pPRV111B #:Nico.ta6_C:rem:common_name= common tobacco; tobacco; American tobacco #:Nico.ta7_C:name:Nicotiana tabacum #:Nico.ta7_C:subsp: #:Nico.ta7_C:strain: #:Nico.ta7_C:atcc: #:Nico.ta7_C:acs:U12814|g559552 (bases 1 to 1324) #:Nico.ta7_C:auth:Zoubenko,O.V., Allison,L.A., Svab,Z. and Maliga,P. #:Nico.ta7_C:title:plastid genome #:Nico.ta7_C:jour:Nucleic Acids Res. 22, 3819-3824 (1994) #:Nico.ta7_C:who: #:Nico.ta7_C:date:02-JUL-1998 #:Nico.ta7_C:title:Efficient targeting of foreign genes into the tobacco #:Nico.ta7_C:rem:ref:1 #:Nico.ta7_C:rem: complement #:Nico.ta7_C:rem:legacy_attribute= Cloning vector pPRV112A #:Nico.ta7_C:rem:common_name= common tobacco; tobacco; American tobacco #:Nico.ta8_C:name:Nicotiana tabacum #:Nico.ta8_C:subsp: #:Nico.ta8_C:strain: #:Nico.ta8_C:atcc: #:Nico.ta8_C:acs:U12815|g559554 (bases 1 to 1324) #:Nico.ta8_C:auth:Zoubenko,O.V., Allison,L.A., Svab,Z. and Maliga,P. #:Nico.ta8_C:title:plastid genome #:Nico.ta8_C:jour:Nucleic Acids Res. 22, 3819-3824 (1994) #:Nico.ta8_C:who: #:Nico.ta8_C:date:02-JUL-1998 #:Nico.ta8_C:title:Efficient targeting of foreign genes into the tobacco #:Nico.ta8_C:rem:ref:1 #:Nico.ta8_C:rem: complement #:Nico.ta8_C:rem:legacy_attribute= Cloning vector pPRV112B #:Nico.ta8_C:rem:common_name= common tobacco; tobacco; American tobacco #:Bras.nap_C:name:Brassica napus #:Bras.nap_C:subsp: #:Bras.nap_C:strain: #:Bras.nap_C:atcc: #:Bras.nap_C:acs: #:Bras.nap_C:auth:Gao,X. #:Bras.nap_C:title: #:Bras.nap_C:jour:Acta Genetica Sinica 16, 3-268 (1989) #:Bras.nap_C:who: #:Bras.nap_C:date:02-JUL-1998 #:Bras.nap_C:rem:ref:1 #:Bras.nap_C:rem:common_name= forage rape; kale #:Adri.gla_C:name:Adriana glabrata #:Adri.gla_C:subsp: #:Adri.gla_C:strain: #:Adri.gla_C:atcc: #:Adri.gla_C:acs:L37578|g625012 #:Adri.gla_C:auth:Wilson,K.H. and Hills,H.G. #:Adri.gla_C:title: #:Adri.gla_C:jour:Unpublished (1994) #:Adri.gla_C:who: #:Adri.gla_C:date:02-JUL-1998 #:Adri.gla_C:rem:ref:1 #:Adri.gla_C:rem:common_name= euphorbialal dicotyledon plant #:Ephr.pul_C:name:Euphorbia pulcherrima #:Ephr.pul_C:subsp: #:Ephr.pul_C:strain: #:Ephr.pul_C:atcc: #:Ephr.pul_C:acs:L37579|g625029 #:Ephr.pul_C:auth:Wilson,K.H. and Hills,H.G. #:Ephr.pul_C:title: #:Ephr.pul_C:jour:Unpublished (1994) #:Ephr.pul_C:who: #:Ephr.pul_C:date:02-JUL-1998 #:Ephr.pul_C:rem:ref:1 #:Ephr.pul_C:rem:common_name= poinsettia #:Rici.com_C:name:Ricinis communis #:Rici.com_C:subsp: #:Rici.com_C:strain: #:Rici.com_C:atcc: #:Rici.com_C:acs:L37580|g625160 #:Rici.com_C:auth:Wilson,K.H. and Hills,H.G. #:Rici.com_C:title: #:Rici.com_C:jour:Unpublished (1994) #:Rici.com_C:who: #:Rici.com_C:date:02-JUL-1998 #:Rici.com_C:rem:ref:1 #:Rici.com_C:rem:common_name= castor bean #:2.11.2.3:name:2.11.2.3 CYANELLE_GROUP #:2.11.2.3:subsp: #:2.11.2.3:strain: #:2.11.2.3:atcc: #:2.11.2.3:acs:DIVIDER #:2.11.2.3:auth: #:2.11.2.3:title: #:2.11.2.3:jour: #:2.11.2.3:who:Brian Dean #:2.11.2.3:date:Sat Jan 9 11:46:11 1999 #:Cynp.par_C:name:Cyanophora paradoxa #:Cynp.par_C:subsp: #:Cynp.par_C:strain: #:Cynp.par_C:atcc: #:Cynp.par_C:acs: #:Cynp.par_C:auth:and Pace,N.R. #:Cynp.par_C:title:chloroplasts #:Cynp.par_C:jour:J. Bacteriol. 170, 3584-3592 (1988) #:Cynp.par_C:who: #:Cynp.par_C:date:02-JUL-1998 #:Cynp.par_C:auth:Giovannoni,S.J., Turner,S., Olsen,G.J., Barns,S., Lane,D.J. #:Cynp.par_C:title:Evolutionary relationships among cyanobacteria and green #:Cynp.par_C:rem:ref:1 #:Cynp.par_C:rem:legacy_attribute= V.L. Stirewalt & D.Bryant, unpublished #:Cynp.par_C:rem:common_name= colorless flagellate alga #:Cynp.par_C:rem:NB: quite a few differences from Cynp.pa2_C #:2.11.2.4:name:2.11.2.4 PSEUDANABAENA_GROUP #:2.11.2.4:subsp: #:2.11.2.4:strain: #:2.11.2.4:atcc: #:2.11.2.4:acs:DIVIDER #:2.11.2.4:auth: #:2.11.2.4:title: #:2.11.2.4:jour: #:2.11.2.4:who:Brian Dean #:2.11.2.4:date:Sat Jan 9 11:46:11 1999 #:Psan.galea:name:"Pseudanabaena galeata" #:Psan.galea:subsp: #:Psan.galea:strain:CCC OL-75-PS #:Psan.galea:atcc: #:Psan.galea:acs: #:Psan.galea:auth:and Pace,N.R. #:Psan.galea:title:chloroplasts #:Psan.galea:jour:J. Bacteriol. 170, 3584-3592 (1988) #:Psan.galea:who: #:Psan.galea:date:02-JUL-1998 #:Psan.galea:auth:Giovannoni,S.J., Turner,S., Olsen,G.J., Barns,S., Lane,D.J. #:Psan.galea:title:Evolutionary relationships among cyanobacteria and green #:Psan.galea:rem:ref:1 #:Psan.galea:rem:isolate_name= CCC OL-75-PS #:Psan.6903:name:"Pseudanabaena" sp. #:Psan.6903:subsp: #:Psan.6903:strain: #:Psan.6903:atcc: #:Psan.6903:acs: #:Psan.6903:auth:and Pace,N.R. #:Psan.6903:title:chloroplasts #:Psan.6903:jour:J. Bacteriol. 170, 3584-3592 (1988) #:Psan.6903:who: #:Psan.6903:date:02-JUL-1998 #:Psan.6903:auth:Giovannoni,S.J., Turner,S., Olsen,G.J., Barns,S., Lane,D.J. #:Psan.6903:title:Evolutionary relationships among cyanobacteria and green #:Psan.6903:rem:ref:1 E.coli 0 |-----------AAAUUGAAGAG-UU(U-GA)UCAU|GGCUCAGAUUGAA E.coli 50 CGC-UGGCGGCAGGCCU--AACACAUGCAAGUCGAACG-GU-------AA E.coli 100 CAG-GAAGAAG(CU------------------UG------)CUUCUUU-- E.coli 150 -GCUG|----------AC-GAGU--GGCGGACGGGUGAGUAA-UGUCUGG E.coli 200 GA-AACUGC-CUGA------------------------------------ E.coli 250 -------------------------------------------------U E.coli 300 GGA---------GGGGGAUAACUA------------------------CU E.coli 350 G(GAAA)CGG-UAGCUAAUACC-GCAU-AA-------------------- E.coli 400 -------C----------GUC-------(GCAA---)-------GAC--- E.coli 450 ---CAAA-----------------------GAGGGG-GA--CC---(--- E.coli 500 -------UUCG------)------GG-|-CCUCUUGCCAUCGGA-UGU|G E.coli 550 -CCCAGAU|-GGGAUUA-GCUAGUAGG-UG-GG(G-UAACGG)-CUCACC E.coli 600 UA|GGCGACGAU-CCCUAGCUG|GUCU(GAGA)GGAUGACCAGC|CACAC E.coli 650 UGGAA(CUGAGACACG)GUCCAGA-C--UCC(UA-CG)GG-A--GGCAG- E.coli 700 CAGUGGGG-AAUAUUGCA-CAAU-GGGC-(-GCAA)-GCCU-GAUGCA|G E.coli 750 CCAUGCCGCGUGUAUGAAGAAGGCC(---UUCG--)GG-UU--GUAAAGU E.coli 800 AC|UUUC-AGCGGGGAGGAAGGGAGUAAAG(UUAAUA-C)CUUUGCUCAU E.coli 850 UGACG-UU-ACCC-GCAGAA-GAAGCACC-GGCU-AACU-CCGUG(CCA- E.coli 900 -GCAGCC-GCGGU---AA-)UACGGAG|GGUGCAAGCGUUAA-UCGGAAU E.coli 950 UACUGGGC|GUAAAGCGCACGCAGGCG|GUUUGUUAAG-|UCA-GAUGUG E.coli 1000 AAAUCCCCGGGC(------------------------------------- E.coli 1050 ---------------------------------UCA)ACCUGGG-AA-CU E.coli 1100 GCAUC--UGA-UAC-U-GGC-AA-G-CUUGAG-UC-UCGUA-----GAGG E.coli 1150 GGGGU|AGAAUUCCAGG-UGUAGCG(GUGAAA)UGCGUAGAGA---UCUG E.coli 1200 GAGGAAUACCGGU---GGC(GAAG)GC-G-GCCCC-CUG-GACGA--A-- E.coli 1250 -------------------------------------------------- E.coli 1300 ----------GACUGACGCU-CAG-GUGCGAAAGCGUGGGGAGCAAACAG E.coli 1350 G(AUU-A-GAUAC)-CCUGGUAG--UC-CAC-GCCGUAAACGAUGUCG-- E.coli 1400 --AC-UU|GGAG-GUUGUGCC-----------------(--------cuu E.coli 1450 ga---)-------------------------------------------- E.coli 1500 --------------------------------GGCGUGGCUUCC-GGAGC E.coli 1550 (UAAC)GCGU-UAAGUCGAC|C|GCCUGGGGAGUACGGCC(GCAA)GGUU E.coli 1600 AAAACUCAAAUGAAUUGACGGGGGCCC-GCACA-------AGCGGU-GGA E.coli 1650 GCAUGUGGUUUAAUUCG-(AUGCAACG)CGAAGAACCUUACCUGGUCUUG E.coli 1700 ACA----UC|-CA-CGG--AA------GUUUUCA-----(GAG-A-)UGA E.coli 1750 GA-AUG---UG--CC---------(UUCG------)---------GGAA- E.coli 1800 ---------------|CCGUGAGA|C|AGGUGCUGCAUG|GCU-GUCGUC E.coli 1850 A|-G-CUCGU|GUU(GUGA)AAUGUUGGG(UUAAGU)CCCGCAACGAGCG E.coli 1900 CAACCCUUA|UCCUUU-G-UUGCC-AGCGG-------------------- E.coli 1950 -------------------------------------------------- E.coli 2000 -------------------------------------------------- E.coli 2050 -----------------------------(--uccgg---)------CCG E.coli 2100 |GGAACUCAAAGGAGACUGCCAGU(GAUAA----)--------------- E.coli 2150 ---------ACUGGAGGAAGGUGGGGAUGACGUC-AA--GUCAUCAUGGC E.coli 2200 CCUUACGACCAGGGCUAC-ACACGUGCUACAAUGGC--GCAUACAAAGAG E.coli 2250 AA----GCGACCUC--------------------(----GCGA-)----- E.coli 2300 --------------GAGC-AAGCGGACC-UCAU-AAAGUGCGUCGUAGUC E.coli 2350 CGGAUUGGAGUC(--UGCAACUC)GACUCCAUGAAGUCGGAAUCGCU--- E.coli 2400 ---AGUAAU-CGUGGA(UC--AGA-AU)GCCACGGUGAAUAC--GUU--- E.coli 2450 -----------------CCCGGGCCUUGUACACACCGCCCGUCACACCAU E.coli 2500 GGGAGUGGG-UUGCAAAAGAAGUAGGU---AGCUU-AACC-(-----uuc E.coli 2550 g------)-GG-AGG-GCG-CU-UACC-ACUU-UGUGAUUCAUGACUGGG E.coli 2600 GUGAAGUCGUAACAAGGUAACCGUAGG(GGAA)CCUGCGGUUGGAUCACC E.coli 2650 UCCUUA--|~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ E.coli 2700 ~~~~~~~~~~~~~~~~| 2.11.2-CHL 0 x~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~ 2.11.2-CHL 50 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 2.11.2-CHL 100 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~ 2.11.2-CHL 150 ~~~~~~---------~~~~~~~~--~~~~~~~~~~~~~~~~~-~~~~~~~ 2.11.2-CHL 200 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 2.11.2-CHL 250 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~ 2.11.2-CHL 300 ~~~---------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 2.11.2-CHL 350 ~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~-------------------- 2.11.2-CHL 400 -------~~~~~~~~~~~~~~~------~~~~~~~-~~------~~~~~~ 2.11.2-CHL 450 ~~~~~~~~~~~~------------------~~~~~~~~~~~~~~~~~~~~ 2.11.2-CHL 500 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~ 2.11.2-CHL 550 -~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~ 2.11.2-CHL 600 ~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 2.11.2-CHL 650 ~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~-~~~~~-~--~~~~~~ 2.11.2-CHL 700 ~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~-~~~~~~~~~~-~~~~~~~~ 2.11.2-CHL 750 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~--~~~~~~~ 2.11.2-CHL 800 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 2.11.2-CHL 850 ~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~ 2.11.2-CHL 900 ~~~~~~~-~~~~~---~~-~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~ 2.11.2-CHL 950 ~~~~~~~~|~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~-~~~~~~ 2.11.2-CHL 1000 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 2.11.2-CHL 1050 ~~~~~~~~~~~~~~~~~~~~~~~~---------~~~~~~~~~~~~~~-~~ 2.11.2-CHL 1100 ~~~~~--~~~~~~~~~-~~~-~~-~-~~~~~~-~~~~~~~~~----~~~~ 2.11.2-CHL 1150 ~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~ 2.11.2-CHL 1200 ~~~~~~~~~~~~~~--~~~~~~~~~~~-~-~~~~~-~~~~~~~~~--~~~ 2.11.2-CHL 1250 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~- 2.11.2-CHL 1300 ----------~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 2.11.2-CHL 1350 ~~~~~-~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~-- 2.11.2-CHL 1400 --~~-~~~~~~~-~~~~~~~~~~~~~~-----------~--------~~~ 2.11.2-CHL 1450 ~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------------- 2.11.2-CHL 1500 --------------------------------~~~~~~~~~~~~-~~~~~ 2.11.2-CHL 1550 ~~~~~~~~~~-~~~~~~~~~~~|~~~~~~~~~~~~~~~~~~~~~~~~~~~ 2.11.2-CHL 1600 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~ 2.11.2-CHL 1650 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 2.11.2-CHL 1700 ~~~~---~~|~~~-~~~~~~~------~~~~~~~~~---~~~~-~~~~~~ 2.11.2-CHL 1750 ~~-~~~~~~~~~~~~~~-------~~~~~~-----~~--------~~~~~ 2.11.2-CHL 1800 ~~-------------~~~~~~~~~|~~~~~~~~~~~~~~~~~~-~~~~~~ 2.11.2-CHL 1850 ~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 2.11.2-CHL 1900 ~~~~~~~~~~~~~~~~-~~~~~~~-~~~~~-~~~~~~~~~~~~~~~~~~~ 2.11.2-CHL 1950 ~~~~~~~~~----------------------------------------- 2.11.2-CHL 2000 -------------------------------------------------- 2.11.2-CHL 2050 -----------------------------~--~~~~~---~~~~~~~~~~ 2.11.2-CHL 2100 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~-------~~~~~~~ 2.11.2-CHL 2150 ~~~------~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~ 2.11.2-CHL 2200 ~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~ 2.11.2-CHL 2250 ~~~---~~~~~~~~--------------------~----~~~~-~-~~~~ 2.11.2-CHL 2300 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~ 2.11.2-CHL 2350 ~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--- 2.11.2-CHL 2400 ---~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~-~~~~-- 2.11.2-CHL 2450 -----------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 2.11.2-CHL 2500 ~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~ 2.11.2-CHL 2550 ~~~~~--~~~~-~~~~~~~~~~~~~~~-~~~~-~~~~~~~~~~~~~~~~~ 2.11.2-CHL 2600 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 2.11.2-CHL 2650 ~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 2.11.2-CHL 2700 ~~~~~~~~~~~~~~~~| 2.11.2.1 0 x~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~ 2.11.2.1 50 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 2.11.2.1 100 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~ 2.11.2.1 150 ~~~~~~---------~~~~~~~~--~~~~~~~~~~~~~~~~~-~~~~~~~ 2.11.2.1 200 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 2.11.2.1 250 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~ 2.11.2.1 300 ~~~---------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 2.11.2.1 350 ~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~-------------------- 2.11.2.1 400 -------~~~~~~~~~~~~~~~------~~~~~~~-~~------~~~~~~ 2.11.2.1 450 ~~~~~~~~~~~~------------------~~~~~~~~~~~~~~~~~~~~ 2.11.2.1 500 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~ 2.11.2.1 550 -~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~ 2.11.2.1 600 ~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 2.11.2.1 650 ~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~-~~~~~-~--~~~~~~ 2.11.2.1 700 ~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~-~~~~~~~~~~-~~~~~~~~ 2.11.2.1 750 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~--~~~~~~~ 2.11.2.1 800 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 2.11.2.1 850 ~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~ 2.11.2.1 900 ~~~~~~~-~~~~~---~~-~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~ 2.11.2.1 950 ~~~~~~~~|~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~-~~~~~~ 2.11.2.1 1000 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 2.11.2.1 1050 ~~~~~~~~~~~~~~~~~~~~~~~~---------~~~~~~~~~~~~~~-~~ 2.11.2.1 1100 ~~~~~--~~~~~~~~~-~~~-~~-~-~~~~~~-~~~~~~~~~----~~~~ 2.11.2.1 1150 ~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~ 2.11.2.1 1200 ~~~~~~~~~~~~~~--~~~~~~~~~~~-~-~~~~~-~~~~~~~~~--~~~ 2.11.2.1 1250 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~- 2.11.2.1 1300 ----------~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 2.11.2.1 1350 ~~~~~-~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~-- 2.11.2.1 1400 --~~-~~~~~~~-~~~~~~~~~~~~~~-----------~--------~~~ 2.11.2.1 1450 ~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------------- 2.11.2.1 1500 --------------------------------~~~~~~~~~~~~-~~~~~ 2.11.2.1 1550 ~~~~~~~~~~-~~~~~~~~~~~|~~~~~~~~~~~~~~~~~~~~~~~~~~~ 2.11.2.1 1600 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~ 2.11.2.1 1650 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 2.11.2.1 1700 ~~~~---~~|~~~-~~~~~~~------~~~~~~~~~---~~~~-~~~~~~ 2.11.2.1 1750 ~~-~~~~~~~~~~~~~~-------~~~~~~-----~~--------~~~~~ 2.11.2.1 1800 ~~-------------~~~~~~~~~|~~~~~~~~~~~~~~~~~~-~~~~~~ 2.11.2.1 1850 ~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 2.11.2.1 1900 ~~~~~~~~~~~~~~~~-~~~~~~~-~~~~~-~~~~~~~~~~~~~~~~~~~ 2.11.2.1 1950 ~~~~~~~~~----------------------------------------- 2.11.2.1 2000 -------------------------------------------------- 2.11.2.1 2050 -----------------------------~--~~~~~---~~~~~~~~~~ 2.11.2.1 2100 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~-------~~~~~~~ 2.11.2.1 2150 ~~~------~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~ 2.11.2.1 2200 ~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~ 2.11.2.1 2250 ~~~---~~~~~~~~--------------------~----~~~~-~-~~~~ 2.11.2.1 2300 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~ 2.11.2.1 2350 ~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--- 2.11.2.1 2400 ---~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~-~~~~-- 2.11.2.1 2450 -----------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 2.11.2.1 2500 ~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~ 2.11.2.1 2550 ~~~~~--~~~~-~~~~~~~~~~~~~~~-~~~~-~~~~~~~~~~~~~~~~~ 2.11.2.1 2600 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 2.11.2.1 2650 ~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 2.11.2.1 2700 ~~~~~~~~~~~~~~~~| (1)-Eukary 0 | (1)-Eukary 23 - (1)-Eukary 85 -- (1)-Eukary 88 - (1)-Eukary 103 --------------------------------------------- (1)-Eukary 148 - (1)-Eukary 156 --------- (1)-Eukary 173 -- (1)-Eukary 178 ------------------- (1)-Eukary 297 -- (1)-Eukary 303 --------- (1)-Eukary 316 -------- (1)-Eukary 324 --------- (1)-Eukary 345 --- (1)-Eukary 354 -- (1)-Eukary 360 - (1)-Eukary 371 - (1)-Eukary 375 - (1)-Eukary 378 - (1)-Eukary 380 --------------------------- (1)-Eukary 412 - (1)-Eukary 422 ---- (1)-Eukary 426 -- (1)-Eukary 438 ------ (1)-Eukary 462 ------------------ (1)-Eukary 491 - (1)-Eukary 494 - (1)-Eukary 499 - (1)-Eukary 507 -- (1)-Eukary 538 - (1)-Eukary 544 - (1)-Eukary 550 - (1)-Eukary 569 -- (1)-Eukary 581 - (1)-Eukary 585 - (1)-Eukary 606 ----- (1)-Eukary 612 - (1)-Eukary 618 | (1)-Eukary 633 | (1)-Eukary 639 | (1)-Eukary 643 -- (1)-Eukary 666 - (1)-Eukary 677 - (1)-Eukary 680 | (1)-Eukary 684 - (1)-Eukary 690 - (1)-Eukary 692 -- (1)-Eukary 698 --- (1)-Eukary 715 - (1)-Eukary 718 - (1)-Eukary 730 - (1)-Eukary 734 -------------------------------------- (1)-Eukary 772 ---------------------- (1)-Eukary 805 ------- (1)-Eukary 822 - (1)-Eukary 828 - (1)-Eukary 830 | (1)-Eukary 833 ----- (1)-Eukary 841 ------------- (1)-Eukary 854 -- (1)-Eukary 866 - (1)-Eukary 889 - (1)-Eukary 899 --- (1)-Eukary 907 - (1)-Eukary 913 --- (1)-Eukary 918 -| (1)-Eukary 926 | (1)-Eukary 931 - (1)-Eukary 942 - (1)-Eukary 958 | (1)-Eukary 988 - (1)-Eukary 990 | (1)-Eukary 993 - (1)-Eukary 1074 --------- (1)-Eukary 1086 - (1)-Eukary 1089 - (1)-Eukary 1097 - (1)-Eukary 1099 | (1)-Eukary 1105 --- (1)-Eukary 1116 - (1)-Eukary 1120 - (1)-Eukary 1123 - (1)-Eukary 1125 ---- (1)-Eukary 1131 |- (1)-Eukary 1142 ---- (1)-Eukary 1164 - (1)-Eukary 1165 ------ (1)-Eukary 1177 - (1)-Eukary 1183 -------------------------------------|----- (1)-Eukary 1226 -------------- (1)-Eukary 1243 - (1)-Eukary 1245 -- (1)-Eukary 1299 ----------- (1)-Eukary 1314 - (1)-Eukary 1320 - (1)-Eukary 1325 | (1)-Eukary 1355 - (1)-Eukary 1361 ------- (1)-Eukary 1371 | (1)-Eukary 1373 -- (1)-Eukary 1383 - (1)-Eukary 1387 - (1)-Eukary 1398 ---- (1)-Eukary 1404 - (1)-Eukary 1412 - (1)-Eukary 1415 - (1)-Eukary 1421 - (1)-Eukary 1427 --------------------- (1)-Eukary 1452 --- (1)-Eukary 1464 -- (1)-Eukary 1467 -- (1)-Eukary 1474 ---- (1)-Eukary 1479 -- (1)-Eukary 1483 -- (1)-Eukary 1487 ------------ (1)-Eukary 1499 --------------------------------- (1)-Eukary 1536 ------------ (1)-Eukary 1560 - (1)-Eukary 1565 | (1)-Eukary 1572 | (1)-Eukary 1575 - (1)-Eukary 1595 - (1)-Eukary 1626 - (1)-Eukary 1646 - (1)-Eukary 1675 ------ (1)-Eukary 1682 ------- (1)-Eukary 1704 --- (1)-Eukary 1709 | (1)-Eukary 1713 - (1)-Eukary 1721 ------ (1)-Eukary 1736 --- (1)-Eukary 1743 - (1)-Eukary 1752 - (1)-Eukary 1767 ------- (1)-Eukary 1777 --------- (1)-Eukary 1787 --- (1)-Eukary 1790 ----- (1)-Eukary 1802 ------------- (1)-Eukary 1821 -- (1)-Eukary 1824 | (1)-Eukary 1832 --- (1)-Eukary 1842 ---------- (1)-Eukary 1865 -- (1)-Eukary 1868 -- (1)-Eukary 1871 -- (1)-Eukary 1883 ---------- (1)-Eukary 1893 ------ (1)-Eukary 1901 - (1)-Eukary 1916 - (1)-Eukary 1924 - (1)-Eukary 1937 - (1)-Eukary 1939 -- (1)-Eukary 1959 -------------------------------------- (1)-Eukary 1997 -------------------------------------------------- (1)-Eukary 2047 -------------------------------- (1)-Eukary 2087 --- (1)-Eukary 2093 -- (1)-Eukary 2114 ||| (1)-Eukary 2130 ---- (1)-Eukary 2136 ------ (1)-Eukary 2142 - (1)-Eukary 2153 ------ (1)-Eukary 2187 -- (1)-Eukary 2218 - (1)-Eukary 2237 - (1)-Eukary 2253 --- (1)-Eukary 2264 -------------------- (1)-Eukary 2285 ---- (1)-Eukary 2293 - (1)-Eukary 2328 - (1)-Eukary 2363 -- (1)-Eukary 2397 ------ (1)-Eukary 2420 - (1)-Eukary 2443 - (1)-Eukary 2448 ------------------- (1)-Eukary 2527 --- (1)-Eukary 2561 - (1)-Eukary 2577 - (1)-Eukary 2582 - (1)-Eukary 2657 - (1)-Eukary 2716 | (2)-Euglen 0 | (2)-Euglen 23 - (2)-Euglen 85 -- (2)-Euglen 88 - (2)-Euglen 103 --------------------------------------------- (2)-Euglen 148 - (2)-Euglen 156 --------- (2)-Euglen 173 -- (2)-Euglen 178 ------------------- (2)-Euglen 297 -- (2)-Euglen 303 --------- (2)-Euglen 316 -------- (2)-Euglen 324 --------- (2)-Euglen 345 --- (2)-Euglen 354 -- (2)-Euglen 360 - (2)-Euglen 371 - (2)-Euglen 375 - (2)-Euglen 378 - (2)-Euglen 380 --------------------------- (2)-Euglen 412 - (2)-Euglen 422 ---- (2)-Euglen 426 -- (2)-Euglen 438 ------ (2)-Euglen 462 ------------------ (2)-Euglen 491 - (2)-Euglen 494 - (2)-Euglen 499 - (2)-Euglen 507 -- (2)-Euglen 538 - (2)-Euglen 544 - (2)-Euglen 550 - (2)-Euglen 569 -- (2)-Euglen 581 - (2)-Euglen 585 - (2)-Euglen 606 ----- (2)-Euglen 612 - (2)-Euglen 618 | (2)-Euglen 633 | (2)-Euglen 639 | (2)-Euglen 643 -- (2)-Euglen 666 - (2)-Euglen 677 - (2)-Euglen 680 | (2)-Euglen 684 - (2)-Euglen 690 - (2)-Euglen 692 -- (2)-Euglen 698 --- (2)-Euglen 715 - (2)-Euglen 718 - (2)-Euglen 730 - (2)-Euglen 734 -------------------------------------- (2)-Euglen 772 ---------------------- (2)-Euglen 805 ------- (2)-Euglen 822 - (2)-Euglen 828 - (2)-Euglen 830 | (2)-Euglen 833 ----- (2)-Euglen 841 ------------- (2)-Euglen 854 -- (2)-Euglen 866 - (2)-Euglen 889 - (2)-Euglen 899 --- (2)-Euglen 907 - (2)-Euglen 913 --- (2)-Euglen 918 -| (2)-Euglen 926 | (2)-Euglen 931 - (2)-Euglen 942 - (2)-Euglen 958 | (2)-Euglen 988 - (2)-Euglen 990 | (2)-Euglen 993 - (2)-Euglen 1074 --------- (2)-Euglen 1086 - (2)-Euglen 1089 - (2)-Euglen 1097 - (2)-Euglen 1099 | (2)-Euglen 1105 --- (2)-Euglen 1116 - (2)-Euglen 1120 - (2)-Euglen 1123 - (2)-Euglen 1125 ---- (2)-Euglen 1131 |- (2)-Euglen 1142 ---- (2)-Euglen 1164 - (2)-Euglen 1165 ------ (2)-Euglen 1177 - (2)-Euglen 1183 -------------------------------------|----- (2)-Euglen 1226 -------------- (2)-Euglen 1243 - (2)-Euglen 1245 -- (2)-Euglen 1299 ----------- (2)-Euglen 1314 - (2)-Euglen 1320 - (2)-Euglen 1325 | (2)-Euglen 1355 - (2)-Euglen 1361 ------- (2)-Euglen 1371 | (2)-Euglen 1373 -- (2)-Euglen 1383 - (2)-Euglen 1387 - (2)-Euglen 1398 ---- (2)-Euglen 1404 - (2)-Euglen 1412 - (2)-Euglen 1415 - (2)-Euglen 1421 - (2)-Euglen 1427 --------------------- (2)-Euglen 1452 --- (2)-Euglen 1464 -- (2)-Euglen 1467 -- (2)-Euglen 1474 ---- (2)-Euglen 1479 -- (2)-Euglen 1483 -- (2)-Euglen 1487 ------------ (2)-Euglen 1499 --------------------------------- (2)-Euglen 1536 ------------ (2)-Euglen 1560 - (2)-Euglen 1565 | (2)-Euglen 1572 | (2)-Euglen 1575 - (2)-Euglen 1595 - (2)-Euglen 1626 - (2)-Euglen 1646 - (2)-Euglen 1675 ------ (2)-Euglen 1682 ------- (2)-Euglen 1704 --- (2)-Euglen 1709 | (2)-Euglen 1713 - (2)-Euglen 1721 ------ (2)-Euglen 1736 --- (2)-Euglen 1743 - (2)-Euglen 1752 - (2)-Euglen 1767 ------- (2)-Euglen 1777 --------- (2)-Euglen 1787 --- (2)-Euglen 1790 ----- (2)-Euglen 1802 ------------- (2)-Euglen 1821 -- (2)-Euglen 1824 | (2)-Euglen 1832 --- (2)-Euglen 1842 ---------- (2)-Euglen 1865 -- (2)-Euglen 1868 -- (2)-Euglen 1871 -- (2)-Euglen 1883 ---------- (2)-Euglen 1893 ------ (2)-Euglen 1901 - (2)-Euglen 1916 - (2)-Euglen 1924 - (2)-Euglen 1937 - (2)-Euglen 1939 -- (2)-Euglen 1959 -------------------------------------- (2)-Euglen 1997 -------------------------------------------------- (2)-Euglen 2047 -------------------------------- (2)-Euglen 2087 --- (2)-Euglen 2093 -- (2)-Euglen 2114 ||| (2)-Euglen 2130 ---- (2)-Euglen 2136 ------ (2)-Euglen 2142 - (2)-Euglen 2153 ------ (2)-Euglen 2187 -- (2)-Euglen 2218 - (2)-Euglen 2237 - (2)-Euglen 2253 --- (2)-Euglen 2264 -------------------- (2)-Euglen 2285 ---- (2)-Euglen 2293 - (2)-Euglen 2328 - (2)-Euglen 2363 -- (2)-Euglen 2397 ------ (2)-Euglen 2420 - (2)-Euglen 2443 - (2)-Euglen 2448 ------------------- (2)-Euglen 2527 --- (2)-Euglen 2561 - (2)-Euglen 2577 - (2)-Euglen 2582 - (2)-Euglen 2657 - (2)-Euglen 2716 | chl.A.long 0 |---------GUGACAUGAAGAG-UU(U-GA)UCCU|UGCUCAGGAUUAA chl.A.long 50 CGC-UGGCGGUAUGCAU--AACACAUGCAAGUUGAACG|GA--------- chl.A.long 100 ----cucguuu(ua------------------ua------)aaaugag-- chl.A.long 150 ----------------UU--AGU--AGCAGACGGGUGAGUAA-UAUGUGA chl.A.long 200 GA-AUCUAC-GUUU------------------------------------ chl.A.long 250 -------------------------------------------------A chl.A.long 300 GGU---------GGGGGAUAACUU------------------------AU chl.A.long 350 A(GAAA)UAU-UUGUUAAUACC-CCAU-AA-------------------- chl.A.long 400 ------------------uug-------(ugcua--)-------uaa--- chl.A.long 450 ---agua-----------------------AAA-------------(--- chl.A.long 500 -------auuu------)---------|----UUUGCCUAAACA-UGA|G chl.A.long 550 -CUUGCAU|-CUGAUUA-GUUUGUUGG-UU-GG(G-UAAUGG)-CUUACC chl.A.long 600 AA|GACUUUGAU|CAGUAGCUG|AUUU(GAGA)GAAUGGUCAGC|CACAC chl.A.long 650 UGGAA(UUGAGA-ACG)GAACAGA-C--UCC(UA-UG)GG-A--GGCAG- chl.A.long 700 CAGUGGGG-AAUUUUCCG-CAAU-GAGU-(-GAAA)-ACUU-GACGGA|G chl.A.long 750 CAAUACCGCGUGUAGGAAGAAGGCU(---GUAU-U)AG-UU--GUAAACU chl.A.long 800 UC|UUUU-UUCAAAAAAGAAUA--------(--------)--------AG chl.A.long 850 UGACG|UU-AUUU-GAAGAA-UAAGCAUC|GGCU-AAUU-CCGUG(CCA- chl.A.long 900 -GCAGCC|GCGGU---AA-)UACGGGG|GAUGCAAGUGUUAU-CCGGAAU chl.A.long 950 UAUUGGGC|GUAAAGGGUCAGGAGGUG|GUAUUAUGUG-|UUU-AAUGUU chl.A.long 1000 AAAUGUUAAAGC(------------------------------------- chl.A.long 1050 ---------------------------------UUA)ACUUUAU-AA-AG chl.A.long 1100 GCAUU--GAA-AAC-U|GUA-AU-A-CUAGAG-UA|UGGUA-----GAGG chl.A.long 1150 UAAAG|GGAAUUUCCAG-UGUAGCG(GUGAAA)UGCGUAAAUA---UUGG chl.A.long 1200 AAAGAACACCAAA---GGC(GAAG)GC|A|CUUUG-CUA|GGCCA--A-- chl.A.long 1250 -------------------------------------------------- chl.A.long 1300 ----------UACUGACAUU|GAG-AGACUAAAGCUAAGGUAGCAAACAG chl.A.long 1350 G(AUU-A-GAUAC)-CCUGGUAG-|UC-UUA-GCCGUAAACUAUGGAU-- chl.A.long 1400 --AC|UA|AGUU-AUGaagauucuguauuuauaugugu(--------uag chl.A.long 1450 au---)auau---------------------------------------- chl.A.long 1500 |-----------------auauagauauga-|ggaugCAUUUCU-AAAGU chl.A.long 1550 (UAAC)ACGU-UAAGUAUCC|C|GCCUGGGGAGUAUUCUU(GCAA)AAGU chl.A.long 1600 GAAACUCAAAGGAAUUGACGGGGGCCC-GCACA-------AGCGGU|GGA chl.A.long 1650 GCAUGUGGUUUAAUUCG-(AUGCAACA)CGAAAAACCUUACCAAGACUUG chl.A.long 1700 ACA----UG|-CU-AGA--GUa----aaugauua-----(uua-u-)uaa chl.A.long 1750 uc-aug---ua--a-----------uuaaa----------------aaa- chl.A.long 1800 ---------------|UCUAGGCA|C|AGGUGGUGCAUG|GCU|GUCGUC chl.A.long 1850 A|-G-CUCGU|AUC(GUGA)GAUGUAUGG(UUUAGU)CCUAUAACGAGCG chl.A.long 1900 CAACCCUUA|UCUUUA-G-UUAa--------------------------- chl.A.long 1950 -------------------------------------------------- chl.A.long 2000 -------------------------------------------------- chl.A.long 2050 -----------------------------(--auuug---)--------- chl.A.long 2100 |--UAUAUUAAAGAaACUGCUGUU(GACAA----)--------------- chl.A.long 2150 ---------AUCAGAGGAAGGAGAGGAUGACGUC-AA--GUCAUCAUGCC chl.A.long 2200 CUUUAUGUCUUGGGCUAC-ACACGUGCUACAAUGGU--UAAGACAAUUAG chl.A.long 2250 UU----GCAAACUU--------------------(----GUAA-)----- chl.A.long 2300 --------------AAGU-GAGCUAAUC-UA-U-AAACUUAAUCUAAGUU chl.A.long 2350 CGGAUUGUAGGC(--UGAAACUC)GUCUACAUGAAGUUGGAAUCGCU--- chl.A.long 2400 ---AGUAAU-CGCCGG(UC--AGCUAU)ACGGCGGUGAAUAU--GUU--- chl.A.long 2450 -----------------CUCGGGCCUUGUACACACCGCCCGUCACACCAA chl.A.long 2500 GGAAGUUAG-UUGUGUUUGAUAUUGUU---UUUUU-AACC-(-----uuu chl.A.long 2550 u------)-GG-GAA-AUG-AU-AAUU-AGGG-CCUGGCUGGUGACCGUG chl.A.long 2600 GUGAAGUCGUAACAAGGUAGCCGUACU(GGAA)GGUGCGGCUGGAAAAAU chl.A.long 2650 GUUU----|~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ chl.A.long 2700 ~~~~~~~~~~~~~~~~| chl.E.grac 0 |---------UGGAAAUGACGAG-UU(U-GA)UCCU|UGCUCAGGGUGAA chl.E.grac 50 CGC-UGGCGGUAUGCUU--AACACAUGCAAGUUGAACG|AA--------- chl.E.grac 100 ----auuacua(gc------------------aa------)uaguaau-- chl.E.grac 150 ----------------UU--AGU--GGCGGACGGGUGAGUAA-UAUGUAA chl.E.grac 200 GA-AUCUGC-GCUU------------------------------------ chl.E.grac 250 -------------------------------------------------G chl.E.grac 300 GGC---------GAGGAAUAACAG------------------------AU chl.E.grac 350 G(GAAA)CGU-UUGCUAAUGCC-UCAU-AA-------------------- chl.E.grac 400 ------------------uuu-------(acu----)-------aga--- chl.E.grac 450 ---ucuau---------------------gugagua-g---cu---(--- chl.E.grac 500 --aguu-aaag------)------ag-|-aauUUCGCCUAGGCA-UGA|G chl.E.grac 550 -CUUGCAU|-CUGAUUA-GCUUGUUGG-UG-AG(G-UAAAGG)-CUUACC chl.E.grac 600 AA|GGCGACGAU|CAGUAGCUG|AUUU(GAGA)GGAUGAUCAGC|CACAC chl.E.grac 650 UGGGA(UUGAGA-ACG)GAACAGA-C--UUC(UA-CG)GA-A--GGCAG- chl.E.grac 700 CAGUGAGG-AAUUUUCCG-CAAU-GGGC-(-GCAA)-GCCU-GACGGA|G chl.E.grac 750 CAAUACCGCGUGAAGGAAGACGGCC(---UUUG--)GG-UU--GAAAACC chl.E.grac 800 UC|UUUU-CUCAAAGAAGAAGA--------(--------)--------AA chl.E.grac 850 UGACG|GU-AUUU-GAGGAA-UAAGCAUC|GGCU-AAUU-CCGUG(CCA- chl.E.grac 900 -GCAGCC|GCGGU---AA-)UACGGGA|GAUGCGAGCGUUAU-CCGGAAU chl.E.grac 950 UAUUGGGC|GUAAAGAGUUUGUAGGCG|GUCAAGUGUG-|UUU-AAUGUU chl.E.grac 1000 AAAAGUCAAAGC(------------------------------------- chl.E.grac 1050 ---------------------------------UUA)ACUUUGG-AA-GG chl.E.grac 1100 GCAUU--AAA-AAC-U|GCU-AG-A-CUUGAG-UA|UGGUA-----GGGG chl.E.grac 1150 UGAAG|GGAAUUUCCAG-UGUAGCG(GUGAAA)UGCGUAGAGA---UUGG chl.E.grac 1200 AAAGAACACCAAU---GGC(GAAG)GC|A|CUUUU-CUA|GGCCA--A-- chl.E.grac 1250 -------------------------------------------------- chl.E.grac 1300 ----------UACUGACGCU|GAG-AAACGAAAGCUGAGGGAGCAAACAG chl.E.grac 1350 G(AUU-A-GAUAC)-CCUG-UAG-|UC-UUG-GCCGUAAACUAUGGAU-- chl.E.grac 1400 --AC|UA|AGUG-GUGC---------------------(--------uga chl.E.grac 1450 aagu-)-------------------------------------------- chl.E.grac 1500 |------------------------------|----GCACUGCU-GUAGU chl.E.grac 1550 (UAAC)ACGU-UAAGUAUCC|C|GCCUGGGGAGUACGCUU(GCAC)AAGU chl.E.grac 1600 GAAACUCAAAGGAAUUGACGGGGGCCC-GCACA-------AGCGGU|GGA chl.E.grac 1650 GCAUGUGGUUUAAUUCG-(AUGCAACA)CGAAGAACCUUACCAGGAUUUG chl.E.grac 1700 ACA---gga|uCU-AGG--a---------aguuu-----(GAA-A-)gaa chl.E.grac 1750 cg-caG---UA--CC---------(UUCG------)---------GGUA- chl.E.grac 1800 ---------------|UCUAGACA|C|AGGUGGUGCAUG|GCU|GUCGUC chl.E.grac 1850 A|-G-CUCGU|GUC(GUGA)GAUGUUGGG(UUAAGU)CCCGCAACGAGCG chl.E.grac 1900 CAACCCUUU|UUUUUA-A-UUAAC-------------------------- chl.E.grac 1950 -------------------------------------------------- chl.E.grac 2000 -------------------------------------------------- chl.E.grac 2050 -----------------------------(--gcuu----)--------- chl.E.grac 2100 |GUCA-UUUAGAAAUACUGCUGGU(U-AUU----)--------------- chl.E.grac 2150 ---------ACCGGAGGAAGGUGAGGACGACGUC-AA--GUCAUCAUGCC chl.E.grac 2200 CCUUAUAUCCUGGGCUAC-ACACGUGCUACAAUGGU--UAAGACAAUAAG chl.E.grac 2250 UU----GCAAUUUU--------------------(----GUGA-)----- chl.E.grac 2300 --------------AAAU-GAGCUAAUC-UU-a-AAACUUAGCCUAAGUU chl.E.grac 2350 CGGAUUGUAGGC(--UGAAACUC)GCCUACAUGAAGCCGGAAUCGCU--- chl.E.grac 2400 ---AGUAAU-CGCCGG(UC--AGCuAU)ACGGCGGUGAAUAC--GUU--- chl.E.grac 2450 -----------------CUCGGGCCUUGUACACACCGCCCGUCACACCAU chl.E.grac 2500 GGAAGUCGG-CUGUGCCCGAAGUUAUU---AUCUU-GCCU-(-----gaa chl.E.grac 2550 a------)-AG-AGG-GAA-AU-ACCU-AAGG-CCUGGCUGGUGACUGGG chl.E.grac 2600 GUGAAGUCGUAACAAGGUAGCCGUACU(GGAA)GGUGUGGCUGGAACAaC chl.E.grac 2650 UCC-----|~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ chl.E.grac 2700 ~~~~~~~~~~~~~~~~| (2)-Eukary 0 | (2)-Eukary 23 - (2)-Eukary 85 -- (2)-Eukary 88 - (2)-Eukary 103 --------------------------------------------- (2)-Eukary 148 - (2)-Eukary 156 --------- (2)-Eukary 173 -- (2)-Eukary 178 ------------------- (2)-Eukary 297 -- (2)-Eukary 303 --------- (2)-Eukary 316 -------- (2)-Eukary 324 --------- (2)-Eukary 345 --- (2)-Eukary 354 -- (2)-Eukary 360 - (2)-Eukary 371 - (2)-Eukary 375 - (2)-Eukary 378 - (2)-Eukary 380 --------------------------- (2)-Eukary 412 - (2)-Eukary 422 ---- (2)-Eukary 426 -- (2)-Eukary 438 ------ (2)-Eukary 462 ------------------ (2)-Eukary 491 - (2)-Eukary 494 - (2)-Eukary 499 - (2)-Eukary 507 -- (2)-Eukary 538 - (2)-Eukary 544 - (2)-Eukary 550 - (2)-Eukary 569 -- (2)-Eukary 581 - (2)-Eukary 585 - (2)-Eukary 606 ----- (2)-Eukary 612 - (2)-Eukary 618 | (2)-Eukary 633 | (2)-Eukary 639 | (2)-Eukary 643 -- (2)-Eukary 666 - (2)-Eukary 677 - (2)-Eukary 680 | (2)-Eukary 684 - (2)-Eukary 690 - (2)-Eukary 692 -- (2)-Eukary 698 --- (2)-Eukary 715 - (2)-Eukary 718 - (2)-Eukary 730 - (2)-Eukary 734 -------------------------------------- (2)-Eukary 772 ---------------------- (2)-Eukary 805 ------- (2)-Eukary 822 - (2)-Eukary 828 - (2)-Eukary 830 | (2)-Eukary 833 ----- (2)-Eukary 841 ------------- (2)-Eukary 854 -- (2)-Eukary 866 - (2)-Eukary 889 - (2)-Eukary 899 --- (2)-Eukary 907 - (2)-Eukary 913 --- (2)-Eukary 918 -| (2)-Eukary 926 | (2)-Eukary 931 - (2)-Eukary 942 - (2)-Eukary 958 | (2)-Eukary 988 - (2)-Eukary 990 | (2)-Eukary 993 - (2)-Eukary 1074 --------- (2)-Eukary 1086 - (2)-Eukary 1089 - (2)-Eukary 1097 - (2)-Eukary 1099 | (2)-Eukary 1105 --- (2)-Eukary 1116 - (2)-Eukary 1120 - (2)-Eukary 1123 - (2)-Eukary 1125 ---- (2)-Eukary 1131 |- (2)-Eukary 1142 ---- (2)-Eukary 1164 - (2)-Eukary 1165 ------ (2)-Eukary 1177 - (2)-Eukary 1183 -------------------------------------|----- (2)-Eukary 1226 -------------- (2)-Eukary 1243 - (2)-Eukary 1245 -- (2)-Eukary 1299 ----------- (2)-Eukary 1314 - (2)-Eukary 1320 - (2)-Eukary 1325 | (2)-Eukary 1355 - (2)-Eukary 1361 ------- (2)-Eukary 1371 | (2)-Eukary 1373 -- (2)-Eukary 1383 - (2)-Eukary 1387 - (2)-Eukary 1398 ---- (2)-Eukary 1404 - (2)-Eukary 1412 - (2)-Eukary 1415 - (2)-Eukary 1421 - (2)-Eukary 1427 --------------------- (2)-Eukary 1452 --- (2)-Eukary 1464 -- (2)-Eukary 1467 -- (2)-Eukary 1474 ---- (2)-Eukary 1479 -- (2)-Eukary 1483 -- (2)-Eukary 1487 ------------ (2)-Eukary 1499 --------------------------------- (2)-Eukary 1536 ------------ (2)-Eukary 1560 - (2)-Eukary 1565 | (2)-Eukary 1572 | (2)-Eukary 1575 - (2)-Eukary 1595 - (2)-Eukary 1626 - (2)-Eukary 1646 - (2)-Eukary 1675 ------ (2)-Eukary 1682 ------- (2)-Eukary 1704 --- (2)-Eukary 1709 | (2)-Eukary 1713 - (2)-Eukary 1721 ------ (2)-Eukary 1736 --- (2)-Eukary 1743 - (2)-Eukary 1752 - (2)-Eukary 1767 ------- (2)-Eukary 1777 --------- (2)-Eukary 1787 --- (2)-Eukary 1790 ----- (2)-Eukary 1802 ------------- (2)-Eukary 1821 -- (2)-Eukary 1824 | (2)-Eukary 1832 --- (2)-Eukary 1842 ---------- (2)-Eukary 1865 -- (2)-Eukary 1868 -- (2)-Eukary 1871 -- (2)-Eukary 1883 ---------- (2)-Eukary 1893 ------ (2)-Eukary 1901 - (2)-Eukary 1916 - (2)-Eukary 1924 - (2)-Eukary 1937 - (2)-Eukary 1939 -- (2)-Eukary 1959 -------------------------------------- (2)-Eukary 1997 -------------------------------------------------- (2)-Eukary 2047 -------------------------------- (2)-Eukary 2087 --- (2)-Eukary 2093 -- (2)-Eukary 2114 ||| (2)-Eukary 2130 ---- (2)-Eukary 2136 ------ (2)-Eukary 2142 - (2)-Eukary 2153 ------ (2)-Eukary 2187 -- (2)-Eukary 2218 - (2)-Eukary 2237 - (2)-Eukary 2253 --- (2)-Eukary 2264 -------------------- (2)-Eukary 2285 ---- (2)-Eukary 2293 - (2)-Eukary 2328 - (2)-Eukary 2363 -- (2)-Eukary 2397 ------ (2)-Eukary 2420 - (2)-Eukary 2443 - (2)-Eukary 2448 ------------------- (2)-Eukary 2527 --- (2)-Eukary 2561 - (2)-Eukary 2577 - (2)-Eukary 2582 - (2)-Eukary 2657 - (2)-Eukary 2716 | (3)-Alveol 0 | (3)-Alveol 23 - (3)-Alveol 85 -- (3)-Alveol 88 - (3)-Alveol 103 --------------------------------------------- (3)-Alveol 148 - (3)-Alveol 156 --------- (3)-Alveol 173 -- (3)-Alveol 178 ------------------- (3)-Alveol 297 -- (3)-Alveol 303 --------- (3)-Alveol 316 -------- (3)-Alveol 324 --------- (3)-Alveol 345 --- (3)-Alveol 354 -- (3)-Alveol 360 - (3)-Alveol 371 - (3)-Alveol 375 - (3)-Alveol 378 - (3)-Alveol 380 --------------------------- (3)-Alveol 412 - (3)-Alveol 422 ---- (3)-Alveol 426 -- (3)-Alveol 438 ------ (3)-Alveol 462 ------------------ (3)-Alveol 491 - (3)-Alveol 494 - (3)-Alveol 499 - (3)-Alveol 507 -- (3)-Alveol 538 - (3)-Alveol 544 - (3)-Alveol 550 - (3)-Alveol 569 -- (3)-Alveol 581 - (3)-Alveol 585 - (3)-Alveol 606 ----- (3)-Alveol 612 - (3)-Alveol 618 | (3)-Alveol 633 | (3)-Alveol 639 | (3)-Alveol 643 -- (3)-Alveol 666 - (3)-Alveol 677 - (3)-Alveol 680 | (3)-Alveol 684 - (3)-Alveol 690 - (3)-Alveol 692 -- (3)-Alveol 698 --- (3)-Alveol 715 - (3)-Alveol 718 - (3)-Alveol 730 - (3)-Alveol 734 -------------------------------------- (3)-Alveol 772 ---------------------- (3)-Alveol 805 ------- (3)-Alveol 822 - (3)-Alveol 828 - (3)-Alveol 830 | (3)-Alveol 833 ----- (3)-Alveol 841 ------------- (3)-Alveol 854 -- (3)-Alveol 866 - (3)-Alveol 889 - (3)-Alveol 899 --- (3)-Alveol 907 - (3)-Alveol 913 --- (3)-Alveol 918 -| (3)-Alveol 926 | (3)-Alveol 931 - (3)-Alveol 942 - (3)-Alveol 958 | (3)-Alveol 988 - (3)-Alveol 990 | (3)-Alveol 993 - (3)-Alveol 1074 --------- (3)-Alveol 1086 - (3)-Alveol 1089 - (3)-Alveol 1097 - (3)-Alveol 1099 | (3)-Alveol 1105 --- (3)-Alveol 1116 - (3)-Alveol 1120 - (3)-Alveol 1123 - (3)-Alveol 1125 ---- (3)-Alveol 1131 |- (3)-Alveol 1142 ---- (3)-Alveol 1164 - (3)-Alveol 1165 ------ (3)-Alveol 1177 - (3)-Alveol 1183 -------------------------------------|----- (3)-Alveol 1226 -------------- (3)-Alveol 1243 - (3)-Alveol 1245 -- (3)-Alveol 1299 ----------- (3)-Alveol 1314 - (3)-Alveol 1320 - (3)-Alveol 1325 | (3)-Alveol 1355 - (3)-Alveol 1361 ------- (3)-Alveol 1371 | (3)-Alveol 1373 -- (3)-Alveol 1383 - (3)-Alveol 1387 - (3)-Alveol 1398 ---- (3)-Alveol 1404 - (3)-Alveol 1412 - (3)-Alveol 1415 - (3)-Alveol 1421 - (3)-Alveol 1427 --------------------- (3)-Alveol 1452 --- (3)-Alveol 1464 -- (3)-Alveol 1467 -- (3)-Alveol 1474 ---- (3)-Alveol 1479 -- (3)-Alveol 1483 -- (3)-Alveol 1487 ------------ (3)-Alveol 1499 --------------------------------- (3)-Alveol 1536 ------------ (3)-Alveol 1560 - (3)-Alveol 1565 | (3)-Alveol 1572 | (3)-Alveol 1575 - (3)-Alveol 1595 - (3)-Alveol 1626 - (3)-Alveol 1646 - (3)-Alveol 1675 ------ (3)-Alveol 1682 ------- (3)-Alveol 1704 --- (3)-Alveol 1709 | (3)-Alveol 1713 - (3)-Alveol 1721 ------ (3)-Alveol 1736 --- (3)-Alveol 1743 - (3)-Alveol 1752 - (3)-Alveol 1767 ------- (3)-Alveol 1777 --------- (3)-Alveol 1787 --- (3)-Alveol 1790 ----- (3)-Alveol 1802 ------------- (3)-Alveol 1821 -- (3)-Alveol 1824 | (3)-Alveol 1832 --- (3)-Alveol 1842 ---------- (3)-Alveol 1865 -- (3)-Alveol 1868 -- (3)-Alveol 1871 -- (3)-Alveol 1883 ---------- (3)-Alveol 1893 ------ (3)-Alveol 1901 - (3)-Alveol 1916 - (3)-Alveol 1924 - (3)-Alveol 1937 - (3)-Alveol 1939 -- (3)-Alveol 1959 -------------------------------------- (3)-Alveol 1997 -------------------------------------------------- (3)-Alveol 2047 -------------------------------- (3)-Alveol 2087 --- (3)-Alveol 2093 -- (3)-Alveol 2114 ||| (3)-Alveol 2130 ---- (3)-Alveol 2136 ------ (3)-Alveol 2142 - (3)-Alveol 2153 ------ (3)-Alveol 2187 -- (3)-Alveol 2218 - (3)-Alveol 2237 - (3)-Alveol 2253 --- (3)-Alveol 2264 -------------------- (3)-Alveol 2285 ---- (3)-Alveol 2293 - (3)-Alveol 2328 - (3)-Alveol 2363 -- (3)-Alveol 2397 ------ (3)-Alveol 2420 - (3)-Alveol 2443 - (3)-Alveol 2448 ------------------- (3)-Alveol 2527 --- (3)-Alveol 2561 - (3)-Alveol 2577 - (3)-Alveol 2582 - (3)-Alveol 2657 - (3)-Alveol 2716 | pl.E.max.1 0 |~~~~~~~~~~~~~~~~~~~~~~~~~(~~~~)~~~~|~~~~~~~~~~~~~ pl.E.max.1 50 ~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~|~~~~~~~~~~~ pl.E.max.1 100 ~~~-~~~~~~~(~~------------------~~~~~~~~)~~~~~~~-- pl.E.max.1 150 -~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ pl.E.max.1 200 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ pl.E.max.1 250 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ pl.E.max.1 300 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ pl.E.max.1 350 ~(~~~~)~~~~~~~~~~~~~~~-~~~~-~~~~~~~~~~~~~~~~~~~~~~ pl.E.max.1 400 ~~~~~~~~----------~~~~~~~~~~(~~~~~~~)~~~~~~~~~~--- pl.E.max.1 450 ---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~--~~---(~~~ pl.E.max.1 500 ~~~~~~-~~~~------)~~~---~~-|-~~~~~~~~~~~~~~~~~~~|~ pl.E.max.1 550 ~~~~~~~~|~~~~~~~~~~~~~~~~~~-~~-~~(~~~~~~~~)-~~~~~~ pl.E.max.1 600 ~~|~~~~~~~~~|~~~~~~~~~|~~~~(~~~~)~~~~~~~~~~~|~~~~~ pl.E.max.1 650 ~~~~~(~~~~~~~~~~)~~~~~~~~~~~~~~(~~~~~)~~~~~~~~~~~~ pl.E.max.1 700 ~~~~~~~~-~~~~~~~~~~~~~~~~~~~~(~~~~~)~~~~~~~~~~~~|~ pl.E.max.1 750 ~~~~~~~~~~~~~~~~~~~~~~~~~(~~~~~~~~~)~~~~~~~~~~~~~~ pl.E.max.1 800 ~~|~~~~~~~~~~~~~~~~~~~~~~~~~~~(~~~~~~-~)~~~~~~~~~~ pl.E.max.1 850 ~~~~~|~~~~~~~-~~~~~~~~~~~~~~~|~~~~~~~~~~~~GUG(CCA- pl.E.max.1 900 -GCAGCA|GCGGU---AA-)UACGGGG|GAUACAAGCGUUAU-CCGGAAU pl.E.max.1 950 UACUGGGC|GUAAAGCGUAUGUAGGUG|G-uuuuaaua-|uau-uuuuau pl.E.max.1 1000 auaaaaaaaac-(------------------------------------- pl.E.max.1 1050 -------------------------------uauau)auuuguu-uu-ua pl.E.max.1 1100 auaaa--aaa--au-u|auu-aa-a-cuagag-uu|uguua-----gggg pl.E.max.1 1150 uaaaA|GGAAUUUUUUG-AGGAGUA(GUGAAA)UGCGAAGAUA---CAAA pl.E.max.1 1200 AAAGAAGACCAAA---AGC(GAAG)GC|A|UUUUA-CUG|GAGCA--G-- pl.E.max.1 1250 -------------------------------------------------- pl.E.max.1 1300 ----------UACUGACACU|GAU-AUACGAAAGUUAAGGUCGCGAAUGG pl.E.max.1 1350 G(AUU-A-GAUAC)-CCCAGUAG-|UC-UUA-ACUGUAAACUAUGGAU-- pl.E.max.1 1400 --AC|UC|GGAA-UAAAAUA------------------(--------uua pl.E.max.1 1450 uauua)-------------------------------------------- pl.E.max.1 1500 |------------------------------|-UAUCUUAUUCC-uUAGC pl.E.max.1 1550 (UAAC)GCGU-UAAGUAUCC|C|GCCUGAGUAGUACGCUC(GCAA)GAGU pl.E.max.1 1600 GAAACUCAAAGGAAUUGACGGGGGCUC-GCACA-------AGCGGU|GGA pl.E.max.1 1650 GCAUGUGGUUUAAUUCG-(AUGCAACA)CGAAGAACCUUACCAGAguuug pl.E.max.1 1700 aaa----ua|-uu-ugu--ua-----uuaaaaaauuaau(aau-u-)uuu pl.E.max.1 1750 ua-uaau-----------------(----------)-------------- pl.E.max.1 1800 ---------------|uacaaaUA|C|AGGAGGUGCAUG|GCU|GUCGUC pl.E.max.1 1850 A|-G-CUCGU|GUC(GUGA)GAUGUUGGG(UUAAGU)CCCGUAACGAGCG pl.E.max.1 1900 UAGCCCUUA|uuuaa----aguu----aac-------------------- pl.E.max.1 1950 -------------------------------------------------- pl.E.max.1 2000 -------------------------------------------------- pl.E.max.1 2050 -----------------------------(-uaucuuuaa)------aaa pl.E.max.1 2100 |cagccuauauuuauu---auaua(aaua-----)--------------- pl.E.max.1 2150 ---------agg--AGGAAGGAAUGGAAAACGUC-AA--GUCCUCAUGCC pl.E.max.1 2200 CUUUAUACUCUGGGCUAU-ACACGUGCUACAAUGGA--UGGUACAAUaaa pl.E.max.1 2250 au----uugauuug--auauuaaagaaaaaaauu(-uuuucuuu)aauuc pl.E.max.1 2300 uauuuguaaaaa--uagauauaaauaua-uuuu-aaaaacauuCUUAGUU pl.E.max.1 2350 CGGAACAUAAAU(--UGCAAUUU)AUUUAUGUGAAGCUGGAAUCGCU--- pl.E.max.1 2400 ---AGUAAU-CGCCGG(GC--AGCCUU)ACGGCGGUGAAUAA--GUC--- pl.E.max.1 2450 -----------------AUCGAGCCUUGUACACACCGCCCGUCACACCAU pl.E.max.1 2500 GGGAAuuaa-uuauuguugaaacuucu----u---------(-----cuu pl.E.max.1 2550 -------)---------aa-ga-aaau-aaau-aagaauuaauaaCUGGG pl.E.max.1 2600 GUGAAGUCGUAACAAGGUAGCCGUA~~(~~~~)~~~~~~~~~~~~~~~~~ pl.E.max.1 2650 ~~~~~~~~|~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ pl.E.max.1 2700 ~~~~~~~~~~~~~~~~| pl.E.max.2 0 |~~~~~~~~~~~~~~~~~~~~~~~~~(~~~~)~~~~|~~~~~~~~~~~~~ pl.E.max.2 50 ~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~|~~~~~~~~~~~ pl.E.max.2 100 ~~~-~~~~~~~(~~------------------~~~~~~~~)~~~~~~~-- pl.E.max.2 150 -~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ pl.E.max.2 200 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ pl.E.max.2 250 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ pl.E.max.2 300 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ pl.E.max.2 350 ~(~~~~)~~~~~~~~~~~~~~~-~~~~-~~~~~~~~~~~~~~~~~~~~~~ pl.E.max.2 400 ~~~~~~~~----------~~~~~~~~~~(~~~~~~~)~~~~~~~~~~--- pl.E.max.2 450 ---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~--~~---(~~~ pl.E.max.2 500 ~~~~~~-~~~~------)~~~---~~-|-~~~~~~~~~~~~~~~~~~~|~ pl.E.max.2 550 ~~~~~~~~|~~~~~~~~~~~~~~~~~~-~~-~~(~~~~~~~~)-~~~~~~ pl.E.max.2 600 ~~|~~~~~~~~~|~~~~~~~~~|~~~~(~~~~)~~~~~~~~~~~|~~~~~ pl.E.max.2 650 ~~~~~(~~~~~~~~~~)~~~~~~~~~~~~~~(~~~~~)~~~~~~~~~~~~ pl.E.max.2 700 ~~~~~~~~-~~~~~~~~~~~~~~~~~~~~(~~~~~)~~~~~~~~~~~~|~ pl.E.max.2 750 ~~~~~~~~~~~~~~~~~~~~~~~~~(~~~~~~~~~)~~~~~~~~~~~~~~ pl.E.max.2 800 ~~|~~~~~~~~~~~~~~~~~~~~~~~~~~~(~~~~~~-~)~~~~~~~~~~ pl.E.max.2 850 ~~~~~|~~~~~~~-~~~~~~~~~~~~~~~|~~~~~~~~~~~~GUG(CCA- pl.E.max.2 900 -GCAGCA|GCGGU---AA-)UACAGGG|GAUACAAGCGUUAU-CCGGAAU pl.E.max.2 950 UACUGGGC|GUAAAGCGUAUGCAGGUG|G-uuuuaaua-|uau-uuuuau pl.E.max.2 1000 auaaaaaaaac-(------------------------------------- pl.E.max.2 1050 -------------------------------uauau)auuuguu-uu-ua pl.E.max.2 1100 guaaa--aaa--gu-u|auu-aa-a-cuagag-uu|uguua-----gggg pl.E.max.2 1150 uaaaa|GGAGUUUUUUG-AGGAGUA(GUGAAA)UGCGAAGAUA---CAAA pl.E.max.2 1200 AAAGAAGACCAAA---AGC(GA--)GC|A|UUUUA-CUG|GAGCA--A-- pl.E.max.2 1250 -------------------------------------------------- pl.E.max.2 1300 ----------UACUGACACU|GAG-AUACGAAAGUUAAGGUCGCAAAUGG pl.E.max.2 1350 G(AUU-A-GAUAC)-CCCAGUAG-|UC-UUG-ACUGUAAACUAUGGAU-- pl.E.max.2 1400 --AC|UC|GGAA-UAAAAUA------------------(--------ugu pl.E.max.2 1450 auua-)-------------------------------------------- pl.E.max.2 1500 |------------------------------|-UAUCUUAUUCC-uUAGC pl.E.max.2 1550 (UAAC)GCGU-UAAGUAUCA|C|GCCUGAGUAGUACGCUC(GCAA)GAUU pl.E.max.2 1600 GAAACUC-------UUGACGGGGGCUC-GCACA-------GGCGGU|GGA pl.E.max.2 1650 GCAUGUGGUUUAGUUCG-(AUGUAAAA)CGAAGAACCUUGCCAGAguuug pl.E.max.2 1700 aaa----ua|-uu-ugu--u------uuuaaaaaauuaa(uaa-u-)uuu pl.E.max.2 1750 uu-auaau----------------(----------)-------------- pl.E.max.2 1800 ---------------|uacaaaUA|C|AGGAGGUGCAUG|GCU|GUCGUC pl.E.max.2 1850 A|-G-CUCGU|GUC(GUGA)GAUUUUGGG(UUAAGU)CACGUAACGAGCG pl.E.max.2 1900 UAGCCAUUA|uuuaa----aguua---ccu-------------------- pl.E.max.2 1950 -------------------------------------------------- pl.E.max.2 2000 -------------------------------------------------- pl.E.max.2 2050 -----------------------------(a-g-cuuuaa)------aaa pl.E.max.2 2100 |cagccuauauuuauu----auau(aaaua----)--------------- pl.E.max.2 2150 ---------agg--AGGAAGGAAUGGAAAACGUC-AG--GUCUUUAUGCC pl.E.max.2 2200 CUUUAUACUCUGGGCUAU-ACACGUGCUACAAUGGA--UGGUACAAUaaa pl.E.max.2 2250 au----uugauauu------agagaaaacaguuu(--uuucuuu)aauuc pl.E.max.2 2300 uauuuggaaaaa--uagauauaaauaua-uuuu-aaaaacauucuuaguu pl.E.max.2 2350 cgaaaCAUAAAU(--UGCAAUUU)AUUUAUUUGAAGCUGGAAUCGCU--- pl.E.max.2 2400 ---AGUAAC-CGCCGG(GC--AGUCUU)ACGGCGGUGAAUAA--GUC--- pl.E.max.2 2450 -----------------AUCGAGCCUUCUACACACCGCCCGUCACACCAU pl.E.max.2 2500 GGGAAuuaa-uuauuguugaaacuccu----u---------(-----uuu pl.E.max.2 2550 -------)---------aa-ga-acau-aaau-aagaauuaauaaCUGGG pl.E.max.2 2600 GUGAAGUCGUAACAAGGUAACCGUA~~(~~~~)~~~~~~~~~~~~~~~~~ pl.E.max.2 2650 ~~~~~~~~|~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ pl.E.max.2 2700 ~~~~~~~~~~~~~~~~| pl.E.melea 0 |~~~~~~~~~~~~~~~~~~~~~~~~~(~~~~)~~~~|~~~~~~~~~~~~~ pl.E.melea 50 ~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~|~~~~~~~~~~~ pl.E.melea 100 ~~~-~~~~~~~(~~------------------~~~~~~~~)~~~~~~~-- pl.E.melea 150 -~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ pl.E.melea 200 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ pl.E.melea 250 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ pl.E.melea 300 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ pl.E.melea 350 ~(~~~~)~~~~~~~~~~~~~~~-~~~~-~~~~~~~~~~~~~~~~~~~~~~ pl.E.melea 400 ~~~~~~~~----------~~~~~~~~~~(~~~~~~~)~~~~~~~~~~--- pl.E.melea 450 ---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~--~~---(~~~ pl.E.melea 500 ~~~~~~-~~~~------)~~~---~~-|-~~~~~~~~~~~~~~~~~~~|~ pl.E.melea 550 ~~~~~~~~|~~~~~~~~~~~~~~~~~~-~~-~~(~~~~~~~~)-~~~~~~ pl.E.melea 600 ~~|~~~~~~~~~|~~~~~~~~~|~~~~(~~~~)~~~~~~~~~~~|~~~~~ pl.E.melea 650 ~~~~~(~~~~~~~~~~)~~~~~~~~~~~~~~(~~~~~)~~~~~~~~~~~~ pl.E.melea 700 ~~~~~~~~-~~~~~~~~~~~~~~~~~~~~(~~~~~)~~~~~~~~~~~~|~ pl.E.melea 750 ~~~~~~~~~~~~~~~~~~~~~~~~~(~~~~~~~~~)~~~~~~~~~~~~~~ pl.E.melea 800 ~~|~~~~~~~~~~~~~~~~~~~~~~~~~~~(~~~~~~-~)~~~~~~~~~~ pl.E.melea 850 ~~~~~|~~~~~~~-~~~~~~~~~~~~~~~|~~~~~~~~~~~~GUG(CCA- pl.E.melea 900 -GCAGCC|GCGGU---AA-)UACGGGG|GAUACAAGCGUUAU-CCGGAAU pl.E.melea 950 UACUGGGC|GUAAAGCGUAUGUAGGUG|GUUUUAAUAU-|-au-uuuuau pl.E.melea 1000 auaaagaaaacu(------------------------------------- pl.E.melea 1050 --------------------------auauauuugu)uuuuuauuaa-aa pl.E.melea 1100 aauua--uua-aac-u-a-----------gag-uc|uguua-----gggg pl.E.melea 1150 uaaaA|GGAAUUUUUUG-AGGAGUA(GUGAAA)UGCGAAGAUA---CAAA pl.E.melea 1200 AAAGAAGACCAAA---AGC(GAAG)GC|A|UUUUA-CUG|GGGCA--G-- pl.E.melea 1250 -------------------------------------------------- pl.E.melea 1300 ----------UACUGACACU|GAG-AUACGAAAGUUAAGGUAGCGAAUGG pl.E.melea 1350 G(AUU-A-GAUAC)-CCCAGUAG-|UC-UUA-ACUGUAAACGAUGGAU-- pl.E.melea 1400 --AC|UC|GGAA-UUAAAUAU-----------------(---------aa pl.E.melea 1450 cua--)-------------------------------------------- pl.E.melea 1500 |------------------------------|AUAUUUAGUUCC-uUAGC pl.E.melea 1550 (UAAC)GCGU-UAAGUAUCC|C|GCCUGAGUAGUACGCUC(GCAA)GAGU pl.E.melea 1600 GAAACUCAAAGGAAUUGACGGGGGCUC-GCACA-------AGCGGU|GGA pl.E.melea 1650 GCAUGUGGUUUAAUUCG-(AUGUAACG)CGAAGAACCUUACCAGAgcuug pl.E.melea 1700 aga----ua|-ua-uau--g----uuuuaaaaau--uua(aua-a-)auu pl.E.melea 1750 uu-uau------------------(----------)----------aaa- pl.E.melea 1800 ---------------|uacaaaUA|C|AGGAGGUGCAUG|GCU|GUCGUC pl.E.melea 1850 A|-G-CUCGU|GUC(GUGA)GAUGUUGGG(UUAAGU)CCCGCAACGAGCG pl.E.melea 1900 UAGCCCUUA|uuuaa----aguu----aa--------------------- pl.E.melea 1950 -------------------------------------------------- pl.E.melea 2000 -------------------------------------------------- pl.E.melea 2050 -----------------------------(auaucuuuaa)------aaa pl.E.melea 2100 |cugccuauau---uuuuauauaa(aaaaua---)--------------- pl.E.melea 2150 ---------agg--AGGAAGGAAUGGAAAACGUC-AA--GUCCUCAUGCC pl.E.melea 2200 CUUUAUGCUCUGGGCUAU-ACACGUGCUACAAUGGA--UGGUACAAUaaa pl.E.melea 2250 uu----uuaaaaga-----------aaaaauuuu(uuucuuuuu)ucugu pl.E.melea 2300 uugaaaaaa-----uagauacaaauaua-uua--aaaaccauucUUAGUU pl.E.melea 2350 CGGAACAUAAAU(--UGCAAUUU)AUUUAUGUGAAGCUGGAAUCGCU--- pl.E.melea 2400 ---AGUAAU-CGCCGG(UC--AGCCUU)ACGGCGGUGAAUAA--GUC--- pl.E.melea 2450 -----------------AUCGAGCCUUGUACACACCGCCCGUCACACCAU pl.E.melea 2500 GGGAAuuaa-uuauuauugaaacuucu----g---------(-----cuu pl.E.melea 2550 -------)---------aa-ga-aaau-aaau-aagaauuaguaaCUGGG pl.E.melea 2600 GUGAAGUCGUAACAAGGUAACCGUA~~(~~~~)~~~~~~~~~~~~~~~~~ pl.E.melea 2650 ~~~~~~~~|~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ pl.E.melea 2700 ~~~~~~~~~~~~~~~~| pl.E.tenel 0 |~~~~~~~~~~~~~~~~~~~~~~~~~(~~~~)~~~~|~~~~~~~~~~~~~ pl.E.tenel 50 ~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~|~~~~~~~~~~~ pl.E.tenel 100 ~~~-~~~~~~~(~~------------------~~~~~~~~)~~~~~~~-- pl.E.tenel 150 -~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ pl.E.tenel 200 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ pl.E.tenel 250 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ pl.E.tenel 300 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ pl.E.tenel 350 ~(~~~~)~~~~~~~~~~~~~~~-~~~~-~~~~~~~~~~~~~~~~~~~~~~ pl.E.tenel 400 ~~~~~~~~----------~~~~~~~~~~(~~~~~~~)~~~~~~~~~~--- pl.E.tenel 450 ---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~--~~---(~~~ pl.E.tenel 500 ~~~~~~-~~~~------)~~~---~~-|-~~~~~~~~~~~~~~~~~~~|~ pl.E.tenel 550 ~~~~~~~~|~~~~~~~~~~~~~~~~~~-~~-~~(~~~~~~~~)-~~~~~~ pl.E.tenel 600 ~~|~~~~~~~~~|~~~~~~~~~|~~~~(~~~~)~~~~~~~~~~~|~~~~~ pl.E.tenel 650 ~~~~~(~~~~~~~~~~)~~~~~~~~~~~~~~(~~~~~)~~~~~~~~~~~~ pl.E.tenel 700 ~~~~~~~~-~~~~~~~~~~~~~~~~~~~~(~~~~~)~~~~~~~~~~~~|~ pl.E.tenel 750 ~~~~~~~~~~~~~~~~~~~~~~~~~(~~~~~~~~~)~~~~~~~~~~~~~~ pl.E.tenel 800 ~~|~~~~~~~~~~~~~~~~~~~~~~~~~~~(~~~~~~-~)~~~~~~~~~~ pl.E.tenel 850 ~~~~~|~~~~~~~-~~~~~~~~~~~~~~~|~~~~~~~~~~~~GUG(CCA- pl.E.tenel 900 -GCAGCC|GCGGU---AA-)UACGGGG|GAUACAAGCGUUAU-CCGGAAU pl.E.tenel 950 UACUGGGC|GUAAAGCGUAUGUAGGUG|Guuuuaauau-|auuuuuauau pl.E.tenel 1000 aaaaaaaacuug(------------------------------------- pl.E.tenel 1050 ---------------------------------aua)uuuguuu-uu-ag pl.E.tenel 1100 uaaaa--aaa-uua-u-uaa-ac-u---agag-uc|uguua-----gggg pl.E.tenel 1150 uaaaA|GGAAUUUUUUG-AGGAGUA(GUGAAA)UGCAAAGAUA---CAAA pl.E.tenel 1200 AAAGAAGACCAAA---AGC(GAAA)GC|A|UUUUA-CUA|GGACA--G-- pl.E.tenel 1250 ------------------------uuuauuu------------------- pl.E.tenel 1300 ----------UACUGACACU|GAG-AUACGAAAGUUAAGGUAGCGAAUGG pl.E.tenel 1350 G(AUU-A-GAUAC)-CCCAGUAG-|UC-UUA-ACUGUAAACGAUGGAU-- pl.E.tenel 1400 --AC|UC|GGAA-UAAUAUA------------------(--------uaa pl.E.tenel 1450 auaa-)-------------------------------------------- pl.E.tenel 1500 |------------------------------|-UAUUUUAUUCC-uUAGC pl.E.tenel 1550 (UAAC)GCGU-UAAGUAUCC|C|GCCUGAGUAGUACGCUC(GCAA)GAGU pl.E.tenel 1600 GAAACUUAAAGGAAUUGACGGGGGCUC-GCACA-------AGCGGU|GGA pl.E.tenel 1650 GCAUGUGGUUUAAUUCG-(AUGUAACG)CGAAGAACCUUACCAGAgcuug pl.E.tenel 1700 aaa----ua|-ua-ggu--u------uuuaaaaauuuaa(uaa-a-)uuu pl.E.tenel 1750 uu-auu------------------(----------)----------aaua pl.E.tenel 1800 uaa------------|ccaUC-UA|C|AGGUGGUGCAUG|GCU|GUCGUC pl.E.tenel 1850 A|-G-CUCGU|GUC(GUGA)GAUGUUGGG(UUAAGU)CCCGCAACGAGCG pl.E.tenel 1900 UAUCCCUUA|uuuaa----aguu----aa--------------------- pl.E.tenel 1950 -------------------------------------------------- pl.E.tenel 2000 -------------------------------------------------- pl.E.tenel 2050 -----------------------------(auaucuuuaa)------aaa pl.E.tenel 2100 |cugccuauau---uuuuuauaua(aaaua----)--------------- pl.E.tenel 2150 ---------agg--AGGAAGGAAUGGAAAACGUC-AA--GUCCUCAUGCC pl.E.tenel 2200 CUUUAUGCUCUGGGCUAU-ACACGUGCUACAAUGGA--UGAUACAAUaaa pl.E.tenel 2250 uu----uaa-------------uauaaagaaaaa(uuuuucuuu)uuuuu pl.E.tenel 2300 auuugaaaaaa---uaaauauaaauauacuua---aaUUCAUUCUUAGUU pl.E.tenel 2350 CGGAACAUAAAU(--UGCAAUUU)AUUUAUGUGAAGCUGGAAUCGCU--- pl.E.tenel 2400 ---AGUAAU-CGCCGG(UC--AGCCUU)ACGGCGGUGAAUAA--GUC--- pl.E.tenel 2450 -----------------AUCGAGCCUUGUACACACCGCCCGUCACACCAU pl.E.tenel 2500 GGAAAuuaa-uuauuauuaaaacuucu----g---------(-----uuu pl.E.tenel 2550 -------)---------aa-ga-aaau-aaau-aagaauuaguaaCUGGG pl.E.tenel 2600 GUGAAGUCGUAACAAGGUAACCGUA~~(~~~~)~~~~~~~~~~~~~~~~~ pl.E.tenel 2650 ~~~~~~~~|~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ pl.E.tenel 2700 ~~~~~~~~~~~~~~~~| pl.N.canin 0 |~~~~~~~~~~~~~~~~~~~~~~~~~(~~~~)~~~~|~~~~~~~~~~~~~ pl.N.canin 50 ~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~|~~~~~~~~~~~ pl.N.canin 100 ~~~-~~~~~~~(~~------------------~~~~~~~~)~~~~~~~-- pl.N.canin 150 -~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ pl.N.canin 200 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ pl.N.canin 250 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ pl.N.canin 300 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ pl.N.canin 350 ~(~~~~)~~~~~~~~~~~~~~~-~~~~-~~~~~~~~~~~~~~~~~~~~~~ pl.N.canin 400 ~~~~~~~~----------~~~~~~~~~~(~~~~~~~)~~~~~~~~~~--- pl.N.canin 450 ---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~--~~---(~~~ pl.N.canin 500 ~~~~~~-~~~~------)~~~---~~-|-~~~~~~~~~~~~~~~~~~~|~ pl.N.canin 550 ~~~~~~~~|~~~~~~~~~~~~~~~~~~-~~-~~(~~~~~~~~)-~~~~~~ pl.N.canin 600 ~~|~~~~~~~~~|~~~~~~~~~|~~~~(~~~~)~~~~~~~~~~~|~~~~~ pl.N.canin 650 ~~~~~(~~~~~~~~~~)~~~~~~~~~~~~~~(~~~~~)~~~~~~~~~~~~ pl.N.canin 700 ~~~~~~~~-~~~~~~~~~~~~~~~~~~~~(~~~~~)~~~~~~~~~~~~|~ pl.N.canin 750 ~~~~~~~~~~~~~~~~~~~~~~~~~(~~~~~~~~~)~~~~~~~~~~~~~~ pl.N.canin 800 ~~|~~~~~~~~~~~~~~~~~~~~~~~~~~~(~~~~~~-~)~~~~~~~~~~ pl.N.canin 850 ~~~~~|~~~~~~~-~~~~~~~~~~~~~~~|~~~~~~~~~~~~GUG(CCA- pl.N.canin 900 -GCAGCC|GCGGU---AA-)UACGGGG|GAUACAAGCGUUUU-CCAAAAU pl.N.canin 950 UACUGGGC|GUAAAGUGUAUGUAGGUG|Gauuaauaug-|uuc-uuacuu pl.N.canin 1000 aaagacuauuug(------------------------------------- pl.N.canin 1050 ---------------------------------aua)aauuuag-ga-aa pl.N.canin 1100 agaaa--gaa-aac-u-auu-aa-u-cuugag-uu|cgaua-----aggg pl.N.canin 1150 uaagA|GGAAUUUUUUG-AGGAGUA(GUGAAA)UGCGAAGAUA---CAAA pl.N.canin 1200 AAAGAAGAUCAAC---AGC(GAAA)GC|A|UCUUA-CUA|GGUCG--A-- pl.N.canin 1250 -------------------------------------------------- pl.N.canin 1300 ----------UACUGACACU|GAG-AUACGAAAGUUAAGGUAGCAAAUGG pl.N.canin 1350 G(AUU-A-GAUAC)-CCCAGUAG-|UC-UUA-ACUGUAAACAAUGGGU-- pl.N.canin 1400 --AC-UC|GGUA-CUGGA--------------------(aauauaaauac pl.N.canin 1450 auaaa)-------------------------------------------- pl.N.canin 1500 |------------------------------|---UUCAGUACC-cUAGC pl.N.canin 1550 (UAAC)GCGU-UAAGUAUCC|C|GCCUGAGUAGUACGCUC(GCAA)GGGU pl.N.canin 1600 GAAACUCAAAGGAAUUGACGGGGGCUC-GUACA-------AGCGGU|GGA pl.N.canin 1650 GCAUGUAAUUUAAUUCG-(AUGUAACG)CGAUAAACCUUACCAGAacuag pl.N.canin 1700 ac-----ua|-aa-uuu--a-uuuuaaauuauua-----(aua-u-)uaa pl.N.canin 1750 uu-aa-------------------(----------)----------AAA- pl.N.canin 1800 ---------------|aaaau-ua|c|aGGAGGUGCAUG|GCU|GUCGUC pl.N.canin 1850 A|-G-CUCGU|GUC(GUGA)GAUGUUGGG(UUAAGU)CCCGCUACGAGCG pl.N.canin 1900 CUACCCUUA|uuuaa----aguuu---uuu-------------------- pl.N.canin 1950 -------------------------------------------------- pl.N.canin 2000 -------------------------------------------------- pl.N.canin 2050 -----------------------------(auaucuuuaa)------aaa pl.N.canin 2100 |cggacuauauaaauuuuuagauu(aaauu----)--------------- pl.N.canin 2150 ---------agu--AGGAAGGAGAGGAAAACGUC-AA--GUCUUUAUGCC pl.N.canin 2200 CUUUAUGUUCUGGGCUAC-AUACGUGCUACAAUAGA--UGGUACAAUaau pl.N.canin 2250 uu----uuaaaaauaaauauaaauauauuaucaa(u-uuauuu-)uuaau pl.N.canin 2300 uuauuugugaa---aauagauguaauaa-uua--aaaACCAUCUCUAGUU pl.N.canin 2350 CGGAACAUAAAC(--UGCAAUUU)GUUUAUGUAAAGUUGGAAUCGCU--- pl.N.canin 2400 ---AGUAAU-CGCCGA(UC--AGCAUC)ACGGCGGUGAAUAA--GUC--- pl.N.canin 2450 -----------------UUCGAGCCUUGUACACACCGCCCGUCACGCCAC pl.N.canin 2500 GGAAAuuga-uuauuuuuuaaaacuuu----u---------(-----ggu pl.N.canin 2550 -------)---------aa-aa-ggau-aaau-aauaauaaauaaCUGGG pl.N.canin 2600 GUGAAGUCGUAACAAGGUAACCGUA~~(~~~~)~~~~~~~~~~~~~~~~~ pl.N.canin 2650 ~~~~~~~~|~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ pl.N.canin 2700 ~~~~~~~~~~~~~~~~| pl.T.gon.1 0 |---------AAAUUAUUACGAG-UU(U-GA)UCCU|GGCUCCGGAAGAA pl.T.gon.1 50 CGC-AAGAGAUGUGCUU--AACACAUGCUAAUUGAAUG|gu--------- pl.T.gon.1 100 ---------au(ua------------------au------)au------- pl.T.gon.1 150 ----------------au--CAU--AGUGUAAUAGUGAGUAA-UGUAUGA pl.T.gon.1 200 GA-AUUUAU-UUUU------------------------------------ pl.T.gon.1 250 -------------------------------------------------A pl.T.gon.1 300 GAA-----------UAUAAUAAAA------------------------AU pl.T.gon.1 350 U(UAAU)AAU-UU-AUAAUAAA-CGC------------------------ pl.T.gon.1 400 ------------------AAU-------(AGU----)-------GUU--- pl.T.gon.1 450 ---uuaaaa--------------------------G-----AU---(--- pl.T.gon.1 500 -------AAUU------)------AU-|-U-----GUCUAAAAA-AAA|G pl.T.gon.1 550 -CUCAUAU|-CUAAUUA-GCUAGUUGG-UG-AA(G-UAAUAG)UUUUACC pl.T.gon.1 600 AA|GGCGAAGAU|UAGUAGCUG|CCUU(GAGA)GGGGAAACAGC|CACAU pl.T.gon.1 650 AGAGA(UUGAAAUACA)GCUCUAA-C--UCC(UA-AG)GG-G--GGCAG- pl.T.gon.1 700 CAGUGGGG-AAUUUUCUGcCAAU-AAGC-(-GCAA)-GCUU-GACAGA|G pl.T.gon.1 750 CGUCAUCACAUGAAGGAGGAAGGCC(u--AUAA-a)GG-UU--GUAAACU pl.T.gon.1 800 UC|UUUU-Gcuuaaaaaaa-----------(-uaaua-c)---------- pl.T.gon.1 850 ugacg|-u-Uuaa-guuuAA-AAAGUAUC|GGCU-AACU-CCGUG(CCA- pl.T.gon.1 900 -GCAGCC|GCGGU---CA-)UACGGGG|GAUACAAGCGUUUU-CCAAAAU pl.T.gon.1 950 UACUGGGC|GUAAAGUGUAUGUAGGUG|GAUUGGUAUG-|UUC-UUCCUU pl.T.gon.1 1000 AAAUACUAUUUG(------------------------------------- pl.T.gon.1 1050 ---------------------------------AUA)AAUUUAG-AA-AA pl.T.gon.1 1100 AGGAA--GAA-AAC-U|AUU-AA-U-CUUGAG-UU|CGAUA-----AGGG pl.T.gon.1 1150 UAAGA|GGAAUUUUUUG-AGGAGUA(GUGAAA)UGCGAAGAUA---CAAA pl.T.gon.1 1200 AAAGAAGAUCAAC---AGC(GAAA)GC|A|UCUUA-CUG|GGUCG--A-- pl.T.gon.1 1250 -------------------------------------------------- pl.T.gon.1 1300 ----------UACUGACACU|GAG-AUACGAAAGUUAAGGUAGCAAAUGG pl.T.gon.1 1350 G(AUU-A-GAUAC)-CCCAGUAG-|UC-UUA-ACUGUAAACAAUGGAU-- pl.T.gon.1 1400 --AC|UC|GGUA-CUGGA--------------------(--gacauuaaa pl.T.gon.1 1450 uauau)-------------------------------------------- pl.T.gon.1 1500 |------------------------------|aaaUUCAGUACC-CUAGC pl.T.gon.1 1550 (UAAC)GCGU-UAAGUAUUC|C|GCCUGAGUAGUACGCUC(GCAA)GGGU pl.T.gon.1 1600 GAAACUCAAAGGAAUUGACGGGGGCUC-GUACA-------AGCGGU|GGA pl.T.gon.1 1650 GCACGUAAUUUAAUUCG-(AUGUAACG)CGAUAAACCUUACCAGAACUAG pl.T.gon.1 1700 AC-----UA|-AA-UUU--A-UUUUAAAUUAUUA-----(AUA-U-)UAA pl.T.gon.1 1750 UU-AAU------------------(----------)----------AAA- pl.T.gon.1 1800 ---------------|AAAUU-UA|C|AGGAGGUGCAUG|GCU|GUCGUC pl.T.gon.1 1850 A|-G-CUCGU|GUC(GUGA)GAUGUUGGG(UUAAGU)CCCGCUACGAGCG pl.T.gon.1 1900 CUACCCUUA|uuuaa----aguuu---uuu-------------------- pl.T.gon.1 1950 -------------------------------------------------- pl.T.gon.1 2000 -------------------------------------------------- pl.T.gon.1 2050 -----------------------------(auaucuuuaa)------aaa pl.T.gon.1 2100 |cagacuauauaaauuuuuguacu(aaauu----)--------------- pl.T.gon.1 2150 ---------agu--AGGAAGGAGAGGAAAACGUC-AA--GUCUUUAUGCC pl.T.gon.1 2200 CUUUAUGUUCUGGGCUAC-AUACGUGCUACAAUAGA--UGGUACAAUaau pl.T.gon.1 2250 uu----uuaaaaau------aaauacaauaucaa(uuuauuu--)uuaau pl.T.gon.1 2300 uuauuugugaa---aauaaauguaauaa-uug--aaaACCAUUUUUAGUU pl.T.gon.1 2350 CGGAACAUAAAC(--UGCAAUUU)GUUUAUGUAAAGUUGGAAUCGCU--- pl.T.gon.1 2400 ---AGUAAU-CGCCGG(UC--AGCAUU)ACGGCGGUGAAUAA--GUC--- pl.T.gon.1 2450 -----------------UUCGAGCCUUGUACACACCGCCCGUCACGCCAC pl.T.gon.1 2500 GGAAAuuga-uuauuuuuuaaaacuuu----u---------(-----gau pl.T.gon.1 2550 -------)---------aa-aa-ggau-aaau-aauaauaaauaaCUGGG pl.T.gon.1 2600 GUGAAGUCGUAACAAGGUAGCUGUACU(GGAA)GGUGCUGCUGGAU-AA- pl.T.gon.1 2650 ---UUU--|~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ pl.T.gon.1 2700 ~~~~~~~~~~~~~~~~| pl.T.gon.2 0 |---------AAAUUAUUACGAG-UU(U-GA)UCCU|GGCUCCGGAAGAA pl.T.gon.2 50 CGC-AAGAGAUGUGCUU--AACACAUGCUAAUUGAAUG|gu--------- pl.T.gon.2 100 ---------au(ua------------------au------)au------- pl.T.gon.2 150 ----------------au--CAU--AGUGUAAUAGUGAGUAA-UGUAUGA pl.T.gon.2 200 GA-AUUUAU-UUUU------------------------------------ pl.T.gon.2 250 -------------------------------------------------A pl.T.gon.2 300 GAA-----------UAUAAUAAAA------------------------AU pl.T.gon.2 350 U(UAAU)AAU-UU-AUAAUAAA-CGC------------------------ pl.T.gon.2 400 ------------------AAU-------(AGU----)-------GUU--- pl.T.gon.2 450 ---uuaaaa--------------------------G-----AU---(--- pl.T.gon.2 500 -------AAUU------)------AU-|-U-----GUCUAAAAA-AAA|G pl.T.gon.2 550 -CUCAUAU|-CUAAUUA-GCUAGUUGG-UG-AA(G-UAAUAG)UUUUACC pl.T.gon.2 600 AA|GGCGAAGAU|UAGUAGCUG|CCUU(GAGA)GGGGAAACAGC|CACAU pl.T.gon.2 650 AGAGA(UUGAAAUACA)GCUCUAA-C--UCC(UA-AG)GG-G--GGCAG- pl.T.gon.2 700 CAGUGGGG-AAUUUUCUG-CAAU-AAGC-(-GCAA)-GCUU-GACAGA|G pl.T.gon.2 750 CGUCAUCACAUGAAGGAGGAAGGCC(U--AUAA-A)GG-UU--GUAAACU pl.T.gon.2 800 UC|UUUU-GCUUAAaaaaa-----------(-uaaua-c)---------- pl.T.gon.2 850 ugacg|-u-UUAA-GUUUAA-AAAGUAUC|GGCU-AACU-CCGUG(CCA- pl.T.gon.2 900 -GCAGCC|GCGGU---AA-)UACGGGG|GAUACAAGCGUUUU-CCAAAAU pl.T.gon.2 950 UACUGGGC|GUAAAGUGUAUGUAGGUG|GAUUGGUAUG-|UUC-UUCCUU pl.T.gon.2 1000 AAAUACUAUUUG(------------------------------------- pl.T.gon.2 1050 ---------------------------------AUA)AAUUUAG-AA-AA pl.T.gon.2 1100 AGGAA--GAA-AAC-U|AUU-AA-U-CUUGAG-UU|CGAUA-----AGGG pl.T.gon.2 1150 UAAGA|GGAAUUUUUUG-AGGAGUA(GUGAAA)UGCGAAGAUA---CAAA pl.T.gon.2 1200 AAAGAAGAUCAAC---AGC(GAAA)GC|A|UCUUA-CUG|GGUCG--A-- pl.T.gon.2 1250 -------------------------------------------------- pl.T.gon.2 1300 ----------UACUGACACU|GAG-AUACGAAAGUUAAGGUAGCAAAUGG pl.T.gon.2 1350 G(AUU-A-GAUAC)-CCCAGUAG-|UC-UUA-ACUGUAAACAAUGGAU-- pl.T.gon.2 1400 --AC|UC|GGUA-CUGGA--------------------(--gacauuaaa pl.T.gon.2 1450 uauau)-------------------------------------------- pl.T.gon.2 1500 |------------------------------|aaaUUCAGUACC-CUAGC pl.T.gon.2 1550 (UAAC)GCGU-UAAGUAUUC|C|GCCUGAGUAGUACGCUC(GCAA)GGGU pl.T.gon.2 1600 GAAACUCAAAGGAAUUGACGGGGGCUC-GUACA-------AGCGGU|GGA pl.T.gon.2 1650 GCAUGUAAUUUAAUUCG-(AUGUAACG)CGAUAAACCUUACCAGAACUAG pl.T.gon.2 1700 AC-----UA|-AA-UUU--A-UUUUAAAUUAUUA-----(AUA-U-)UAA pl.T.gon.2 1750 UU-AAU------------------(----------)----------AAA- pl.T.gon.2 1800 ---------------|AAAUU-UA|C|AGGAGGUGCAUG|GCU|GUCGUC pl.T.gon.2 1850 A|-G-CUCGU|GUC(GUGA)GAUGUUGGG(UUAAGU)CCCGCUACGAGCG pl.T.gon.2 1900 CUACCCUUA|uuuaa----aguuu---uuu-------------------- pl.T.gon.2 1950 -------------------------------------------------- pl.T.gon.2 2000 -------------------------------------------------- pl.T.gon.2 2050 -----------------------------(auaucuuuaa)------aaa pl.T.gon.2 2100 |cagacuauauaaauuuuuguacu(aaauu----)--------------- pl.T.gon.2 2150 ---------agu--AGGAAGGAGAGGAAAACGUC-AA--GUCUUUAUGCC pl.T.gon.2 2200 CUUUAUGUUCUGGGCUAC-AUACGUGCUACAAUAGA--UGGUACAAUaau pl.T.gon.2 2250 uu----uuaaaaau------aaauacaauaucaa(u-uuauuu-)uuaau pl.T.gon.2 2300 uuauuugugaa---aauaaauguaauaa-uug--aaaACCAUUUUUAGUU pl.T.gon.2 2350 CGGAACAUAAAC(--UGCAAUUU)GUUUAUGUAAAGUUGGAAUCGCU--- pl.T.gon.2 2400 ---AGUAAU-CGCCGG(UC--AGCAUU)ACGGCGGUGAAUAA--GUC--- pl.T.gon.2 2450 -----------------UUCGAGCCUUGUACACACCGCCCGUCACGCCAC pl.T.gon.2 2500 GGAAAuuga-uuauuuuuuaaaacuuu----u---------(-----gau pl.T.gon.2 2550 -------)---------aa-aa-ggau-aaau-aauaauaaauaa~~~~~ pl.T.gon.2 2600 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ pl.T.gon.2 2650 ~~~~~~~~|~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ pl.T.gon.2 2700 ~~~~~~~~~~~~~~~~| pl.H.cates 0 |~~~~~~~~~~~~~~~~~~~~~~~~~(~~~~)~~~~|~~~~~~~~~~~~~ pl.H.cates 50 ~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~|~~~~~~~~~~~ pl.H.cates 100 ~~~-~~~~~~~(~~------------------~~~~~~~~)~~~~~~~-- pl.H.cates 150 -~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ pl.H.cates 200 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ pl.H.cates 250 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ pl.H.cates 300 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ pl.H.cates 350 ~(~~~~)~~~~~~~~~~~~~~~-~~~~-~~~~~~~~~~~~~~~~~~~~~~ pl.H.cates 400 ~~~~~~~~----------~~~~~~~~~~(~~~~~~~)~~~~~~~~~~--- pl.H.cates 450 ---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~--~~---(~~~ pl.H.cates 500 ~~~~~~-~~~~------)~~~---~~-|-~~~~~~~~~~~~~~~~~~~|~ pl.H.cates 550 ~~~~~~~~|~~~~~~~~~~~~~~~~~~-~~-~~(~~~~~~~~)-~~~~~~ pl.H.cates 600 ~~|~~~~~~~~~|~~~~~~~~~|~~~~(~~~~)~~~~~~~~~~~|~~~~~ pl.H.cates 650 ~~~~~(~~~~~~~~~~)~~~~~~~~~~~~~~(~~~~~)~~~~~~~~~~~~ pl.H.cates 700 ~~~~~~~~-~~~~~~~~~~~~~~~~~~~~(~~~~~)~~~~~~~~~~~~|~ pl.H.cates 750 ~~~~~~~~~~~~~~~~~~~~~~~~~(~~~~~~~~~)~~~~~~~~~~~~~~ pl.H.cates 800 ~~|~~~~~~~~~~~~~~~~~~~~~~~~~~~(~~~~~~-~)~~~~~~~~~~ pl.H.cates 850 ~~~~~|~~~~~~~-~~~~~~~~~~~~~~~|~~~~~~~~~~~~GUG(CCA- pl.H.cates 900 -GCAGCA|GCGGU---AA-)UACGAGA|GAUGCAAGCGUUAU-UCGGAAU pl.H.cates 950 UAUUGGGC|GUAAAGUGUGUGUAGGUG|Guuuguugua-|cuu-uaaacu pl.H.cates 1000 aaaaaauuaaau(------------------------------------- pl.H.cates 1050 -uuuaauaauuauaauuaaauaauuaucaaacuaag)agauugu-ua-aa pl.H.cates 1100 aauaa--aac-gaa-c-uuu-uu-g-gggagu-gg|uuuaa-----uacg pl.H.cates 1150 uugau-CCAAUAAGGAA-GAUUAAA(GUGAAA)ACUUUUUAUU---AGAG pl.H.cates 1200 CAU----------------------------------------------- pl.H.cates 1250 -------------------------------------------------- pl.H.cates 1300 ----------uuCUGACACU|GAG-ACACGAAAGCUAAGGUAGCAAAUGA pl.H.cates 1350 G(AUU-A-GAGAC)-CUCAGUCAg|UC-UUA-GCUGUAAAUUAUGAAA-- pl.H.cates 1400 --AC-UU|AAAA-AUAAU--------------------(-----uuuauu pl.H.cates 1450 auaaa)-------------------------------------------- pl.H.cates 1500 |------------------------------|---AUUAUUUUU-uaugc pl.H.cates 1550 -uaac-gcuu-caaguuuUC|C|GCCUGGGUAGUACAUUU(GAAA)AAAU pl.H.cates 1600 GAAACUUAAAGGAAUUGACGGGGAUCC-UUACA-------AGCGGU|GGG pl.H.cates 1650 GCAUGUGGUUUAAUUCG-(AUGCAACA)CGAAAAACCUUACCAAAAUUAG pl.H.cates 1700 AC-----UA|-----------------------------(------)--- pl.H.cates 1750 ------------------------(----------)-------------- pl.H.cates 1800 ---------------|------ua|c|aGGUGGUGCAUG|GCU|GUCGUC pl.H.cates 1850 A|-G-UUUGU|GCC(GUGA)GGCGUUGGA(UUUAGU)UCCAUAACAAACG pl.H.cates 1900 CUACCCUUU|uauaa------ua----uuu-------------------- pl.H.cates 1950 -------------------------------------------------- pl.H.cates 2000 -------------------------------------------------- pl.H.cates 2050 -----------------------------(auauauuua-)------uua pl.H.cates 2100 |uauacu-gcuaaauuauauuaau(aauuu----)--------------- pl.H.cates 2150 ---------ag---AGGAAGGAGAGGAAGACGUC-AA--GUCAUCAUGCU pl.H.cates 2200 CUUUAUAUUUUGGGCCGC-CCACAUGCCACAAAGAG--AAAUAUaAUaaa pl.H.cates 2250 au----aguaauau---aguuuuuauuguaaaau(-aaaaguu-)auuuu pl.H.cates 2300 aaaaauuuuuccuaguacggaaguuaga-uug--aaa------------- pl.H.cates 2350 ---uuucuaa--(----------)------GUAAAGCAGGAAUCGCU--- pl.H.cates 2400 ---AGUAAU-CGUUGG(UC--AGCUAU)ACAACGGUGAAUUA--UUG--- pl.H.cates 2450 -----------------CAAGGAUCUUGUACACACCGCCCGUCACAUCAG pl.H.cates 2500 GGAAAuuua-ggguuauaaaaauaauu----u---------(-----aua pl.H.cates 2550 -------)---------uu-au-uauu-auau-aguacuaaguaaCUAGG pl.H.cates 2600 GUGAAGUCGUAACAAGGUAACCGUA~~(~~~~)~~~~~~~~~~~~~~~~~ pl.H.cates 2650 ~~~~~~~~|~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ pl.H.cates 2700 ~~~~~~~~~~~~~~~~| pl.P.falci 0 |----------uuauauugcGAG-UU(U-GA)UCCU|AGCUCAGAAUUAA pl.P.falci 50 CGC-UAGAAAUAUACAU--UACACAUGCAAAUUA-AUG|A---------- pl.P.falci 100 ----------U(-A------------------AU------)A-------- pl.P.falci 150 -----------------U--CAU--AGUGUAUAGGUGAG-GA-UAUAUAA pl.P.falci 200 AU-UUUUAAUUUUA------------------------------------ pl.P.falci 250 -------------------------------------------------- pl.P.falci 300 AAU---------AGAUUAU--AAA------------------------UU pl.P.falci 350 U(UAUU)AAA-UA----AUAAU-CUAU-Aa-------------------- pl.P.falci 400 ------gc----------gca-------(aaaaua-)-------uau--- pl.P.falci 450 ---guac-----------------------uAUAUU-----AA---(--- pl.P.falci 500 --------AAA------)------UU-|-AAUAUUAUUUAAAAU-AAA|A pl.P.falci 550 -UUUAUAU|-UUGAUUA-ACUAGUUGG-UA-AU(U-UAAAAG)-ACUACC pl.P.falci 600 AA|GGUUAUUAU|CAAAAAUUG|GUUU(GAAA)GAAUGUACAAU|CACAU pl.P.falci 650 UAGGA(UUGAAAUAAA)GCCUAAA-U--UUU(UAUAA)AA-A--AUCAG- pl.P.falci 700 CAGUGAGG-AAUAUUUUA-CAAU-AAGU-(-GUAA)-GCUU-GAUAAA|G pl.P.falci 750 UAAUAUUUCUUUUAGGAAGACAGUA(UUAUUAAAA)UA-UU--GUAAACU pl.P.falci 800 UU|UUAU-UUUAUUuuuaAAuAu-------(--------)---------- pl.P.falci 850 ugau-|aa--aAA-UAAAAA-AUAGUAUU|UGCU-AUUU-CUGUG(CCA- pl.P.falci 900 -GCAGCA|GCGGU---AA-)UACAGAA|AAUGCAAGCGUUAU-UCAUUUU pl.P.falci 950 AUU-AGGC|GUAAAGCGUUUUAAGGUU|UUAUAUUAAU-|UUU-AUGUUU pl.P.falci 1000 AAAUAUUUAAAU(------------------------------------- pl.P.falci 1050 --------------------------------UAAA)UUUAAAA-UA-AA pl.P.falci 1100 UUAAU--AAA-UAA-U|AAU-AU-A-AUAGAG-UA|UUAUA-----AAAG pl.P.falci 1150 UAUUA|AGAAUUUUUUG-AGAAGUA(GUGAAA)UACAAUGAUA---CAAA pl.P.falci 1200 AAAGAAUAUCAAA---GGC(GGAA)GC|A|UAAUA-CUA|UAUAA--U-- pl.P.falci 1250 -------------------------------------------------- pl.P.falci 1300 ----------UACUGACACU|UAA-AAACGAAAGCUAAGGUAGCAAAUAG pl.P.falci 1350 G(AUU-A-GAUAC)-CCUAGUAG-|UC-UUA-GCUGUAAACUAUGAAU-- pl.P.falci 1400 --AU|UU|UAUA-UUUAU--------------------(-------AUUU pl.P.falci 1450 U----)-------------------------------------------- pl.P.falci 1500 |------------------------------|---AUAAAUAUA-AUAAC pl.P.falci 1550 (UAAC)GUGA-UAAAUAUUC|C|GCCUGAGUAGUAUAUUC(GCAA)GAAU pl.P.falci 1600 GAAAUUCAAAGGAAUUGACGGGAGCUU-AUACA-------AGUGGU|GGA pl.P.falci 1650 ACAUGUGGCUUAAUUCG-(AUGCAACA)CGAUAAACCUUACCAAAAUUUA pl.P.falci 1700 ACA----AU|-AU-UUU--UA------AUAUUAA-----(GAA-A-)UUA pl.P.falci 1750 AU-AU------------------u(uuaau-----)a------------- pl.P.falci 1800 ---------------|AAAUA-UA|U|AGGUAGUGCAUG|GCU|GUCGUC pl.P.falci 1850 A|-G-UUCGU|GCU(GUGA)AGUGUUAAU(UUUAGU)AUUAUAACGAACG pl.P.falci 1900 UAACCUUUU|------------------------auaaaa---------- pl.P.falci 1950 -------------------------------------------------- pl.P.falci 2000 -------------------------------------------------- pl.P.falci 2050 -----------------------------(----------)--------- pl.P.falci 2100 |-------------aaaauuuuua(uaa------)--------------- pl.P.falci 2150 ----------uaaa-uaauaAUAAAGAUUACGUC-AA--GUCAUUAUGCU pl.P.falci 2200 CCUUAUAUUUUGGGCUGC-UCACGUGUUACAUAAAA--UAUUACAAUAUU pl.P.falci 2250 UU---------AUU--------------------(-auauguua)----- pl.P.falci 2300 --------------AAU-----AUAAUA-AUUA-AAAUAUAUUUAUAGUU pl.P.falci 2350 CAGAUUAUAAAU(--UGAAACUC)AUUUAUAUAAAGAUGGAAUCACU--- pl.P.falci 2400 ---AGUAAU-CGCUAA(UC--AGAAUU)AUAGCGGUGAAUAA--GUU--- pl.P.falci 2450 -----------------CUUAAGCUUUGUACACACCGCCCGUCACAUCUA pl.P.falci 2500 AAAAGUAUc-auauuauauaaaaauuauugu----------(-----uaa pl.P.falci 2550 -------)-------------a-uaauaauau-auaauuAUAUAAUUUAG pl.P.falci 2600 AUGAAGUCGUAACAAGGUAGCCGUACU(GGAA)GGUGCGGCUGGAUAAUA pl.P.falci 2650 AAAUAA--|auu~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ pl.P.falci 2700 ~~~~~~~~~~~~~~~~| pl.P.vivax 0 |~~~~~~~~~~~~~~~~~~~~~~~~~(~~~~)~~~~|~~~~~~~~~~~~~ pl.P.vivax 50 ~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~|~~~~~~~~~~~ pl.P.vivax 100 ~~~-~~~~~~~(~~------------------~~~~~~~~)~~~~~~~-- pl.P.vivax 150 -~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ pl.P.vivax 200 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ pl.P.vivax 250 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ pl.P.vivax 300 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ pl.P.vivax 350 ~(~~~~)~~~~~~~~~~~~~~~-~~~~-~~~~~~~~~~~~~~~~~~~~~~ pl.P.vivax 400 ~~~~~~~~----------~~~~~~~~~~(~~~~~~~)~~~~~~~~~~--- pl.P.vivax 450 ---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~--~~---(~~~ pl.P.vivax 500 ~~~~~~-~~~~------)~~~---~~-|-~~~~~~~~~~~~~~~~~~~|~ pl.P.vivax 550 ~~~~~~~~|~~~~~~~~~~~~~~~~~~-~~-~~(~~~~~~~~)-~~~~~~ pl.P.vivax 600 ~~|~~~~~~~~~|~~~~~~~~~|~~~~~~~~~~~~~~~~~~~~~|~~~~~ pl.P.vivax 650 ~~~~~(~~~~~~~~~~)~~~~~~~~~~~~~~(~~~~~)~~~~~~~~~~~~ pl.P.vivax 700 ~~~~~~~~-~~~~~~~~~~~~~~~~~~~~(~~~~~)~~~~~~~~~~~~|~ pl.P.vivax 750 ~~~~~~~~~~~~~~~~~~~~~~~~~(~~~~~~~~~)~~~~~~~~~~~~~~ pl.P.vivax 800 ~~|~~~~~~~~~~~~~~~~~~~~~~~~~~~(~~~~~~-~)~~~~~~~~~~ pl.P.vivax 850 ~~~~~|~~~~~~~-~~~~~~~~~~~~~~~|~~~~~~~~~~~~GUG(CCA- pl.P.vivax 900 -GCAGCA|GCGGU---AA-)UACAGAA|AAUGCAAGCGUUAU-UCCCUUU pl.P.vivax 950 AUU-AGGC|GUAAAGCGUUUUAAGGUU|UUAUAUUAAU-|UUU-AUUUUA pl.P.vivax 1000 AAAUAUUUAAUU(------------------------------------- pl.P.vivax 1050 --------------------------------AAAA)UUUAAAA-AA-AA pl.P.vivax 1100 --AAU--AAA-UAA-U|AAU-AU-A-AUAGAG-UA|UUAUU-----AAAG pl.P.vivax 1150 UAUUA|AGAAUUUUUUG-AGAAGUA(GUGAAA)UACAAUGAUA---CAAA pl.P.vivax 1200 AAGGAAUACCAAA---AGC(GAAA)GC|A|UAAUA-CUA|AAUAA--U-- pl.P.vivax 1250 -------------------------------------------------- pl.P.vivax 1300 ----------UACUGACACU|UAA-AAACGAAAGCUAAGGUAGCAAAUAG pl.P.vivax 1350 G(AUU-A-GAUAC)-CCUAGUAG-|UC-UUA-GCUGUAAACUAUGAAU-- pl.P.vivax 1400 --AU|UU|UAUA-UUUAU--------------------(-------AUU- pl.P.vivax 1450 auau-)-------------------------------------------- pl.P.vivax 1500 |------------------------------|---AUAAAUAUA-AUAAC pl.P.vivax 1550 (uaac)guaa-aAAAUAUUC|C|GCCUGAGUAGUAUAUUC(GCAA)GAAU pl.P.vivax 1600 UAAAUUCAAAGGAAUUGACGGGAGCUU-AUACA-------AGUGGU|GGA pl.P.vivax 1650 ACAUGUGGCUUAAUUCG-(AUGCAACA)CGAUAAACCUUACCAAAAUUUA pl.P.vivax 1700 ACA----AU|-AU-UUU--UA------AUAUUAA-----(GAA-A-)UUA pl.P.vivax 1750 AU-AG------------------u(uuaau-----)a------------- pl.P.vivax 1800 ---------------|AAAUA-UA|U|AGGUAGUGCAUG|GCU|GUCGUC pl.P.vivax 1850 A|-G-UUCGU|GCU(GUGA)AGUAUUAAU(UUCAGU)AUUAUAACGAACG pl.P.vivax 1900 UAACCUUUU|auagaa------------------aaauaauuuu------ pl.P.vivax 1950 -------------------------------------------------- pl.P.vivax 2000 -------------------------------------------------- pl.P.vivax 2050 -----------------------------(----------)--------- pl.P.vivax 2100 |-------uauaauauauuauuaa(uaa------)--------------- pl.P.vivax 2150 ----------uaaauauauaAAAAAGAUUACGUC-AA--GUCAUUAUGCU pl.P.vivax 2200 CCUUAUAUUUUGGGCCGC-UCACGUGUUACAUAAAA--UAUUACAAUAUA pl.P.vivax 2250 uu---------UAU------------------ua(----uaua-)--ua- pl.P.vivax 2300 --------------AAU-----AUAA-U-AUUUAAAAUAUAUUUAUAGUU pl.P.vivax 2350 CAGAUUAUAAAU(--UGAAACUC)AUUUAUAUGAAGAUGGAAUCACU--- pl.P.vivax 2400 ---AGUAAU-CGCUAA(UU--AGAAUU)AUAGCGGUGAAUAA--GUU--- pl.P.vivax 2450 -----------------CUUAAGCUUUGUACACACCGCCCGUCACAUCUG pl.P.vivax 2500 AAAAAUAUu-auauuauauaaaaauuauugu----------(-----uaa pl.P.vivax 2550 -------)-------------a-uaauaauau-auaaaaAUAUAAUUUAG pl.P.vivax 2600 AUGAAGUCGUAACAAGGUAACCGUA~~(~~~~)~~~~~~~~~~~~~~~~~ pl.P.vivax 2650 ~~~~~~~~|~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ pl.P.vivax 2700 ~~~~~~~~~~~~~~~~| pl.Bab.big 0 |~~~~~~~~~~~~~~~~~~~~~~~~~(~~~~)~~~~|~~~~~~~~~~~~~ pl.Bab.big 50 ~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~|~~~~~~~~~~~ pl.Bab.big 100 ~~~-~~~~~~~(~~------------------~~~~~~~~)~~~~~~~-- pl.Bab.big 150 -~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ pl.Bab.big 200 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ pl.Bab.big 250 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ pl.Bab.big 300 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ pl.Bab.big 350 ~(~~~~)~~~~~~~~~~~~~~~-~~~~-~~~~~~~~~~~~~~~~~~~~~~ pl.Bab.big 400 ~~~~~~~~----------~~~~~~~~~~(~~~~~~~)~~~~~~~~~~--- pl.Bab.big 450 ---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~--~~---(~~~ pl.Bab.big 500 ~~~~~~-~~~~------)~~~---~~-|-~~~~~~~~~~~~~~~~~~~|~ pl.Bab.big 550 ~~~~~~~~|~~~~~~~~~~~~~~~~~~-~~-~~(~~~~~~~~)-~~~~~~ pl.Bab.big 600 ~~|~~~~~~~~~|~~~~~~~~~|~~~~(~~~~)~~~~~~~~~~~|~~~~~ pl.Bab.big 650 ~~~~~(~~~~~~~~~~)~~~~~~~~~~~~~~(~~~~~)~~~~~~~~~~~~ pl.Bab.big 700 ~~~~~~~~-~~~~~~~~~~~~~~~~~~~~(~~~~~)~~~~~~~~~~~~|~ pl.Bab.big 750 ~~~~~~~~~~~~~~~~~~~~~~~~~(~~~~~~~~~)~~~~~~~~~~~~~~ pl.Bab.big 800 ~~|~~~~~~~~~~~~~~~~~~~~~~~~~~~(~~~~~~-~)~~~~~~~~~~ pl.Bab.big 850 ~~~~~|~~~~~~~-~~~~~~~~~~~~~~~|~~~~~~~~~~~~GUG(CCA- pl.Bab.big 900 -GCAGCA|GCGGU---AA-)UACAGAG|GAUAUAAGCGUUAU-UCAUAAU pl.Bab.big 950 UAUUGGGC|AUAAAGCAUCCUUAGAUG|GUUUAUUGUA-|UUA-AAGUAG pl.Bab.big 1000 AAAU-UUAAAAA(------------------------------------- pl.Bab.big 1050 -------------------------------uaaua)UUUUUAA-ac-au pl.Bab.big 1100 uauau-uuAA-uAU-U|AAU-Agaacuuugag-aa|uaaaa-----cAAG pl.Bab.big 1150 UUUAA|GGAAUUUUUUG-AGUAAUG(GUGAAA)UAUUAUUUCUAUACAUU pl.Bab.big 1200 AAAGAAGGCCAUG---AAC(GAAA)GU|G|UUAAA-CUA|AUAUA--U-- pl.Bab.big 1250 -------------------------------------------------- pl.Bab.big 1300 ----------GUCUGACAUU|GAU-GGAUGAAAGCUAAAGGAGCAAAUGG pl.Bab.big 1350 G(AUU-A-GAUAC)-CCCAGUAG-|UU-UUA-GCUGUAAAUGAUGAAU-- pl.Bab.big 1400 --AU|U-|AAAA-UUUAG---------------aaaaa(---------uu pl.Bab.big 1450 auu--)uuuuu--------------------------------------- pl.Bab.big 1500 |------------------------------|---UUAGAUUUA-A-aGU pl.Bab.big 1550 (UAAU)GCGU-AAAAUAUUC|C|GCCUGAAUAGUAUGCUC(GCAA)GAGU pl.Bab.big 1600 CAAAUUCAAAGGAACUGACGGGAACUU-AUACA-------AGUGAU|GAG pl.Bab.big 1650 CUAUGUUAUUUAAUUUG-(AUGCAGCC)CAAAAAAUCUUACCAAUAUUUG pl.Bab.big 1700 ACA----UA|-AU-Uaa--au------auuuuuc-----(uuu-ac)gga pl.Bab.big 1750 aa-au-------------------(uuuaa-----)-------------- pl.Bab.big 1800 ---------------|UUAAUCUU|A|AGGUGGUGCAUG|GUU|GUCGUC pl.Bab.big 1850 A|-G-CUAGU|GCU(GUGA)AGUAAUUAA(AUUAUU)UUAA-AACUAGCG pl.Bab.big 1900 UAACCCUUA|---------------------------------------- pl.Bab.big 1950 -------------------------------------------------- pl.Bab.big 2000 -------------------------------------------------- pl.Bab.big 2050 -----------------------------(----------)--------- pl.Bab.big 2100 |----------------uuuuaau(auau-----)--------------- pl.Bab.big 2150 ---------auauaau-uaaACAAGGACGAUGUC-AA--AUCUUUAUGCC pl.Bab.big 2200 CCUUAUGUAUUGGGCUAU-UAGCGUGGCGCAACGAU--AAAAACAAAUGU pl.Bab.big 2250 AA----aaaauauu---------uauuaaauuuu(----auga-)aaauu pl.Bab.big 2300 uuauaua-------uau---UAUUA--A-AACU-AAAUUUUAUCUCAGUA pl.Bab.big 2350 CGACAUAUAAAU(--UGAAAUCU)AUUUAUAUUUAGUAGUAACCACU--- pl.Bab.big 2400 ---AGUAAU-CGUUAG(UC--AUAUAU)AUAACGGUGAAUAU--AUA--- pl.Bab.big 2450 -----------------AUUAAGUUUUGUACACACCGCCCGUCGCAUCCU pl.Bab.big 2500 GAAAauaaa-uacgauacaaguuauu---------------(--uu-aua pl.Bab.big 2550 -------)------------ag-uaacaaauu-uuugauuuguGAUUAGG pl.Bab.big 2600 AUGAAGUCGUAACAAGGUAACCGUA~~(~~~~)~~~~~~~~~~~~~~~~~ pl.Bab.big 2650 ~~~~~~~~|~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ pl.Bab.big 2700 ~~~~~~~~~~~~~~~~| pl.B.bov.1 0 |~~~~~~~~~~~~~~~~~~~GAG-UU(U-GA)UCCU|GGCUCAGAAUGAA pl.B.bov.1 50 CGC-UUAAGACGUACUUUUAACACAUGCuAAUUAAAUU|UA--------- pl.B.bov.1 100 aaa-uauuaaa(-a------------------uu------)uuuaaua-- pl.B.bov.1 150 --uuauu---------UAA-AUU--AGUGUAGAGGUGAGUAA-UGAAUAG pl.B.bov.1 200 AA-CUAAAAUUGUA------------------------------------ pl.B.bov.1 250 -------------------------------------------------- pl.B.bov.1 300 AAU---------CGAGGAUAA---------------------------cu pl.B.bov.1 350 a(uaag)ugu-gc----auuuu-augu-gu----guuuauacuaauuc-- pl.B.bov.1 400 ----------------------------(-------)------------- pl.B.bov.1 450 -------------ucuuuaagugc------uaaaaa----------(cgu pl.B.bov.1 500 acaauu-aaaa------)---------|-UUUUuAUUUACAAAU-UAA|U pl.B.bov.1 550 -UCUAUUU|-UUGAUUA-GCUAUUUAA-UA-UU(A-AAAAAU)-AAUAUU pl.B.bov.1 600 AA|GGUGAAGAU|CAAUAACUG|GCCU(GAGA)GGGUUUACAGU|CACAU pl.B.bov.1 650 CAGAA(UUGAGAUAAA)AUCUGAA-U--UUC(UA-UA)GA-GagAGCAG- pl.B.bov.1 700 CAGUGGGG-AAUAUUCUA-CAAU-UAGU-(-GAAA)-ACUA-GAUAGA|G pl.B.bov.1 750 UGACGUCGUGUGAAAAAGAUGAAAU(AAAAUGUAA)AU-UUcuguaaa-u pl.B.bov.1 800 aa|uUCU-aaAAcaug--------------(--------)---------- pl.B.bov.1 850 ugau-|c--gaaU-UauaaG-AAAAUAUC|GGCA-AACU-CUGUG(CCA- pl.B.bov.1 900 -GCAGCC|GC-GU---AA-)UACAGAG|GAUAUAAGCGUUAU-UCGCAUU pl.B.bov.1 950 UAUUGGGC|AUAAAGCAUCCUUAGAUG|GUUUAUUAUA-|UUA-UUUUAA pl.B.bov.1 1000 AAAU-UUAAAAA(------------------------------------- pl.B.bov.1 1050 -------------------------------uaaua)UUUUUAA-ac-au pl.B.bov.1 1100 uaaua-uuAA-gAU-U|AAU-AA-ACUUAGAG-GG|UAAAA-----UAAG pl.B.bov.1 1150 UUUAA|GGAAUUUUUUG-AGUAAUG(GUGAAA)UAUGAUUUCUAUACAUU pl.B.bov.1 1200 AAAGAAGGCCAAA---AAU(GAAA)GU|A|UUAAA-CUG|GUUUA--U-- pl.B.bov.1 1250 -------------------------------------------------- pl.B.bov.1 1300 ----------UUCUGACAUU|GGA-GGAUGAAAGCUAAAGUAGCGAAUGG pl.B.bov.1 1350 G(AUU-A-GAUAC)-CCCAGUAG-|UU-UUA-GCCGUAAAUUAUGAAU-- pl.B.bov.1 1400 --AU|U-|AAAA-UUUAG----------------aaau(---------aa pl.B.bov.1 1450 u----)auuu---------------------------------------- pl.B.bov.1 1500 |------------------------------|---UUAAAUUUA-A-aGU pl.B.bov.1 1550 (UAAU)ACGU-UAAAUAUUC|C|GCCUGAAGAGUACACUC(GCAA)GAGU pl.B.bov.1 1600 CAAAUUCAAAGGAACUGACGGGAACUU-AUACA-------AGUGAU|GAG pl.B.bov.1 1650 CUAUGUUGUUUAAUUUG-(AUGCAGCC)CAAAAAAUCUUACCAAUAUUUA pl.B.bov.1 1700 ACA----UA|-AU-UUA--AA-auaaauuuuuau-----(uaa-a-)aua pl.B.bov.1 1750 aa-aau------------------(guuaa-----)-------------- pl.B.bov.1 1800 ---------------|UUAAUCUU|A|AGGUGGUGCAUG|GUU|GUCGUC pl.B.bov.1 1850 A|-G-CUAGU|GCU(GUGA)AGUaaauca(uaaaau)auaa-AACUAGCG pl.B.bov.1 1900 GAACCCUUA|u--------------------------------------- pl.B.bov.1 1950 -------------------------------------------------- pl.B.bov.1 2000 -------------------------------------------------- pl.B.bov.1 2050 -----------------------------(----------)--------- pl.B.bov.1 2100 |-----------------cuaugu(cuau-----)--------------- pl.B.bov.1 2150 ---------auauaguauaAAUAAGGACGAUGUC-AA--AUCUUUAUGCC pl.B.bov.1 2200 CCUUAUGUAUUGGGCUAU-UAGCGUGGCGCAAUGAU--GAAUACAAGUGU pl.B.bov.1 2250 AG----aaaauauu---------uauuaaacuuu(----uuaa-)aaagu pl.B.bov.1 2300 uuauaaa-------uau---gauucaaA-UGU--AAAUUUCAUCUCAGUA pl.B.bov.1 2350 CGAUAUAUAAAU(--UGAAAUUU)AUUUAUAUAGAGUAGUAACCACU--- pl.B.bov.1 2400 ---AGUAAU-CGUUAG(UC--AUAUAU)AUAACGGUGAAUGA--AUA--- pl.B.bov.1 2450 -----------------AUUAAGUUUUGUACACACCGCCCGUCGCAUCCU pl.B.bov.1 2500 GAAAaugga-gugaauuuaaauuauu---------------(--ua-aau pl.B.bov.1 2550 -------)------------aa-uaauaaaua-uucaauucguGAUUAGG pl.B.bov.1 2600 AUGAAGUCGUAACAAGGUAACCCU~~~(~~~~)~~~~~~~~~~~~~~~~~ pl.B.bov.1 2650 ~~~~~~~-|~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ pl.B.bov.1 2700 ~~~~~~~~~~~~~~~~| pl.B.bov.2 0 |~~~~~~~~~~~~~~~~~~~~~~~~~(~~~~)~~~~|~~~~~~~~~~~~~ pl.B.bov.2 50 ~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~|~~~~~~~~~~~ pl.B.bov.2 100 ~~~-~~~~~~~(~~------------------~~~~~~~~)~~~~~~~-- pl.B.bov.2 150 -~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ pl.B.bov.2 200 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ pl.B.bov.2 250 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ pl.B.bov.2 300 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ pl.B.bov.2 350 ~(~~~~)~~~~~~~~~~~~~~~-~~~~-~~~~~~~~~~~~~~~~~~~~~~ pl.B.bov.2 400 ~~~~~~~~----------~~~~~~~~~~(~~~~~~~)~~~~~~~~~~--- pl.B.bov.2 450 ---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~--~~---(~~~ pl.B.bov.2 500 ~~~~~~-~~~~------)~~~---~~-|-~~~~~~~~~~~~~~~~~~~|~ pl.B.bov.2 550 ~~~~~~~~|~~~~~~~~~~~~~~~~~~-~~-~~(~~~~~~~~)-~~~~~~ pl.B.bov.2 600 ~~|~~~~~~~~~|~~~~~~~~~|~~~~(~~~~)~~~~~~~~~~~|~~~~~ pl.B.bov.2 650 ~~~~~(~~~~~~~~~~)~~~~~~~~~~~~~~(~~~~~)~~~~~~~~~~~~ pl.B.bov.2 700 ~~~~~~~~-~~~~~~~~~~~~~~~~~~~~(~~~~~)~~~~~~~~~~~~|~ pl.B.bov.2 750 ~~~~~~~~~~~~~~~~~~~~~~~~~(~~~~~~~~~)~~~~~~~~~~~~~~ pl.B.bov.2 800 ~~|~~~~~~~~~~~~~~~~~~~~~~~~~~~(~~~~~~-~)~~~~~~~~~~ pl.B.bov.2 850 ~~~~~|~~~~~~~-~~~~~~~~~~~~~~~|~~~~~~~~~~~~GUG(CCA- pl.B.bov.2 900 -GCAGCC|GCGGU---AA-)UACAGAG|GAUAUAAGCGUUAU-UCGCAUU pl.B.bov.2 950 UAUUGGGC|AUAAAGCAUCCUUAGAUG|GUUUAUUAUA-|UUA-UUUUAA pl.B.bov.2 1000 AAAU-UUAAAAA(------------------------------------- pl.B.bov.2 1050 -------------------------------uaaua)UUUUUAA-ac-au pl.B.bov.2 1100 uaaua-uuAA-gAU-U|AAU-AA-ACUUAGAG-GG|UAAAA-----UAAG pl.B.bov.2 1150 UUUAA|GGAAUUUUUUG-AGUAAUG(GUGAAA)UAUGAUUUCUAUACAUU pl.B.bov.2 1200 AAAGAAGGCCAAA---AAU(GAAA)GU|A|UUAAA-CUG|GUUUA--C-- pl.B.bov.2 1250 -------------------------------------------------- pl.B.bov.2 1300 ----------UUCUGACAUU|GGA-GGAUGAAAGCUAAAGUAGCGAAUGG pl.B.bov.2 1350 G(AUU-A-GAUAC)-CCCAGUAG-|UU-UUA-GCCGUAAAUUAUGAAU-- pl.B.bov.2 1400 --AU|U-|AAAA-UUUAG----------------aaau(---------aa pl.B.bov.2 1450 u----)auuu---------------------------------------- pl.B.bov.2 1500 |------------------------------|---UUAAAUUUA-A-aGU pl.B.bov.2 1550 (UAAU)ACGU-UAAAUAUUC|C|GCCUGAAGAGUACACUC(GCAA)GAGU pl.B.bov.2 1600 CAAAUUCAAAGGAACUGACGGGAACUU-AUACA-------AGUGAU|GAG pl.B.bov.2 1650 CUAUGUUGUUUAAUUUG-(AUGCAGCC)CAAAAAAUCUUACCAAUAUUUA pl.B.bov.2 1700 ACA----UA|-AU-UUA--AA-auaaguuuuuau-----(uaa-a-)aua pl.B.bov.2 1750 aa-aau------------------(guuaa-----)-------------- pl.B.bov.2 1800 ---------------|UUAAUCUU|A|AGGUGGUGCAUG|GUU|GUCGUC pl.B.bov.2 1850 A|-G-CUAGU|GCU(GUGA)AGUaaauca(uaaaau)guaa-AACUAGCG pl.B.bov.2 1900 GAACCCUUA|u--------------------------------------- pl.B.bov.2 1950 -------------------------------------------------- pl.B.bov.2 2000 -------------------------------------------------- pl.B.bov.2 2050 -----------------------------(----------)--------- pl.B.bov.2 2100 |-----------------cuaugu(cuau-----)--------------- pl.B.bov.2 2150 ---------auauaguauaAAUAAGGACGAUGUC-AA--AUCUUUAUGCC pl.B.bov.2 2200 CCUUAUGUAUUGGGCUAU-UAGCGUGGCGCAAUGAU--GAAUACAAGUGU pl.B.bov.2 2250 AG----aaaauauu---------uauuaaacuuu(----uuaa-)aaagc pl.B.bov.2 2300 uuauaaa-------uau---gauucaaA-UGU--AAAUUUCAUCUCAGUA pl.B.bov.2 2350 CGAUAUAUAAAU(--UGAAAUUU)AUUUAUAUAGAGUAGUAACCACU--- pl.B.bov.2 2400 ---AGUAAU-CGUUAG(UC--AUAUAU)AUAACGGUGAAUGA--AUA--- pl.B.bov.2 2450 -----------------AUUAAGUUUUGUACACACCGCCCGUCGCAUCCU pl.B.bov.2 2500 GAAAaugga-gugaauuuaaauuauu---------------(--ua-aau pl.B.bov.2 2550 -------)------------aa-uaauaaaua-uucaauucguGAUUAGG pl.B.bov.2 2600 AUGAAGUCGUAACAAGGUAACCGUA~~(~~~~)~~~~~~~~~~~~~~~~~ pl.B.bov.2 2650 ~~~~~~~~|~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ pl.B.bov.2 2700 ~~~~~~~~~~~~~~~~| (3)-Chlora 0 | (3)-Chlora 23 - (3)-Chlora 85 -- (3)-Chlora 88 - (3)-Chlora 103 --------------------------------------------- (3)-Chlora 148 - (3)-Chlora 156 --------- (3)-Chlora 173 -- (3)-Chlora 178 ------------------- (3)-Chlora 297 -- (3)-Chlora 303 --------- (3)-Chlora 316 -------- (3)-Chlora 324 --------- (3)-Chlora 345 --- (3)-Chlora 354 -- (3)-Chlora 360 - (3)-Chlora 371 - (3)-Chlora 375 - (3)-Chlora 378 - (3)-Chlora 380 --------------------------- (3)-Chlora 412 - (3)-Chlora 422 ---- (3)-Chlora 426 -- (3)-Chlora 438 ------ (3)-Chlora 462 ------------------ (3)-Chlora 491 - (3)-Chlora 494 - (3)-Chlora 499 - (3)-Chlora 507 -- (3)-Chlora 538 - (3)-Chlora 544 - (3)-Chlora 550 - (3)-Chlora 569 -- (3)-Chlora 581 - (3)-Chlora 585 - (3)-Chlora 606 ----- (3)-Chlora 612 - (3)-Chlora 618 | (3)-Chlora 633 | (3)-Chlora 639 | (3)-Chlora 643 -- (3)-Chlora 666 - (3)-Chlora 677 - (3)-Chlora 680 | (3)-Chlora 684 - (3)-Chlora 690 - (3)-Chlora 692 -- (3)-Chlora 698 --- (3)-Chlora 715 - (3)-Chlora 718 - (3)-Chlora 730 - (3)-Chlora 734 -------------------------------------- (3)-Chlora 772 ---------------------- (3)-Chlora 805 ------- (3)-Chlora 822 - (3)-Chlora 828 - (3)-Chlora 830 | (3)-Chlora 833 ----- (3)-Chlora 841 ------------- (3)-Chlora 854 -- (3)-Chlora 866 - (3)-Chlora 889 - (3)-Chlora 899 --- (3)-Chlora 907 - (3)-Chlora 913 --- (3)-Chlora 918 -| (3)-Chlora 926 | (3)-Chlora 931 - (3)-Chlora 942 - (3)-Chlora 958 | (3)-Chlora 988 - (3)-Chlora 990 | (3)-Chlora 993 - (3)-Chlora 1074 --------- (3)-Chlora 1086 - (3)-Chlora 1089 - (3)-Chlora 1097 - (3)-Chlora 1099 | (3)-Chlora 1105 --- (3)-Chlora 1116 - (3)-Chlora 1120 - (3)-Chlora 1123 - (3)-Chlora 1125 ---- (3)-Chlora 1131 |- (3)-Chlora 1142 ---- (3)-Chlora 1164 - (3)-Chlora 1165 ------ (3)-Chlora 1177 - (3)-Chlora 1183 -------------------------------------|----- (3)-Chlora 1226 -------------- (3)-Chlora 1243 - (3)-Chlora 1245 -- (3)-Chlora 1299 ----------- (3)-Chlora 1314 - (3)-Chlora 1320 - (3)-Chlora 1325 | (3)-Chlora 1355 - (3)-Chlora 1361 ------- (3)-Chlora 1371 | (3)-Chlora 1373 -- (3)-Chlora 1383 - (3)-Chlora 1387 - (3)-Chlora 1398 ---- (3)-Chlora 1404 - (3)-Chlora 1412 - (3)-Chlora 1415 - (3)-Chlora 1421 - (3)-Chlora 1427 --------------------- (3)-Chlora 1452 --- (3)-Chlora 1464 -- (3)-Chlora 1467 -- (3)-Chlora 1474 ---- (3)-Chlora 1479 -- (3)-Chlora 1483 -- (3)-Chlora 1487 ------------ (3)-Chlora 1499 --------------------------------- (3)-Chlora 1536 ------------ (3)-Chlora 1560 - (3)-Chlora 1565 | (3)-Chlora 1572 | (3)-Chlora 1575 - (3)-Chlora 1595 - (3)-Chlora 1626 - (3)-Chlora 1646 - (3)-Chlora 1675 ------ (3)-Chlora 1682 ------- (3)-Chlora 1704 --- (3)-Chlora 1709 | (3)-Chlora 1713 - (3)-Chlora 1721 ------ (3)-Chlora 1736 --- (3)-Chlora 1743 - (3)-Chlora 1752 - (3)-Chlora 1767 ------- (3)-Chlora 1777 --------- (3)-Chlora 1787 --- (3)-Chlora 1790 ----- (3)-Chlora 1802 ------------- (3)-Chlora 1821 -- (3)-Chlora 1824 | (3)-Chlora 1832 --- (3)-Chlora 1842 ---------- (3)-Chlora 1865 -- (3)-Chlora 1868 -- (3)-Chlora 1871 -- (3)-Chlora 1883 ---------- (3)-Chlora 1893 ------ (3)-Chlora 1901 - (3)-Chlora 1916 - (3)-Chlora 1924 - (3)-Chlora 1937 - (3)-Chlora 1939 -- (3)-Chlora 1959 -------------------------------------- (3)-Chlora 1997 -------------------------------------------------- (3)-Chlora 2047 -------------------------------- (3)-Chlora 2087 --- (3)-Chlora 2093 -- (3)-Chlora 2114 ||| (3)-Chlora 2130 ---- (3)-Chlora 2136 ------ (3)-Chlora 2142 - (3)-Chlora 2153 ------ (3)-Chlora 2187 -- (3)-Chlora 2218 - (3)-Chlora 2237 - (3)-Chlora 2253 --- (3)-Chlora 2264 -------------------- (3)-Chlora 2285 ---- (3)-Chlora 2293 - (3)-Chlora 2328 - (3)-Chlora 2363 -- (3)-Chlora 2397 ------ (3)-Chlora 2420 - (3)-Chlora 2443 - (3)-Chlora 2448 ------------------- (3)-Chlora 2527 --- (3)-Chlora 2561 - (3)-Chlora 2577 - (3)-Chlora 2582 - (3)-Chlora 2657 - (3)-Chlora 2716 | chl.Chl.re 0 |---------nnnnGGAUCCGAGUUU(U-GA)UCCU|GGCUCAGGAUGAA chl.Chl.re 50 CGC-UGGCGGUAUGCU---GACACAUGCAAGUCGAACG|AAA-------- chl.Chl.re 100 --------aga(uu------------------uaa-----)ucu------ chl.Chl.re 150 ----------------UUU-AGU--GGCGCACGGGUGAGUAA-CGCGUAA chl.Chl.re 200 GA-AUCUCC-CUCU------------------------------------ chl.Chl.re 250 -------------------------------------------------A chl.Chl.re 300 GGU---------AAAGGGUAACAA------------------------UU chl.Chl.re 350 G(GAAA)CGG-UUGCUAAUACU-UUAU-AU-------------------- chl.Chl.re 400 ------------------GCU-------(GAGA---)-------AGU--- chl.Chl.re 450 ---GAAAU----------------------GAUgug-ua-------(--- chl.Chl.re 500 -----g-cag-------)------ua-|-cgcAUUGCCUAGUGA-UGA|G chl.Chl.re 550 -CUUGCGU|-CUGAUUA-GCCUGUUGG-UA-AG(A-UAAUAG)-CUUACC chl.Chl.re 600 AA|AGCUAUAAU|CAGUAGCUG|GUCU(GAGA)GGAUGAACAGC|CACAC chl.Chl.re 650 CGGAA(CUUAGACACG)GUCCGGA-C--UCC(UA-CG)GG-A--GGCAG- chl.Chl.re 700 CAGUGAGG-AAUUUUCCG-CAAU-GGGC-(-GAAA)-GCCU-GACGGA|G chl.Chl.re 750 CAAUACCGCGUGGAGGAUGAAAGCC(---UAUG--)GG-UU--GUAAACU chl.Chl.re 800 CC|UUUU-CUUAGAAAAGAAG---------(---UUc--)---------- chl.Chl.re 850 UGAcG|GU-AUCU-AAAGAA-UAAGCAUC|GGCU-AACU-CCGUG(CCA- chl.Chl.re 900 -GCAGCC|GCGGU---AA-)UACGGGG|GAUGCAAGCGUUAU-CCGGAAU chl.Chl.re 950 UAUUGGGU|GUAAAGCGUCUGUAGGUU|GCUUACUUAAG|UCA-GUUGUU chl.Chl.re 1000 AAAUUUCAGAAC(------------------------------------- chl.Chl.re 1050 ---------------------------------UCA)AUUUUGA-UAAAG chl.Chl.re 1100 GCAAC--UGA-AAC-U|AAU-AA-G-CUAGAG-UC|GAGGA-----GAGG chl.Chl.re 1150 CAGAA|GGAACUCCGAG-UGUAGCG(NUGAAA)UGCGUAGAUA---UUCG chl.Chl.re 1200 GAAGAACACCGAC---GGC(GAAA)GC|A|UUCUG-CUG|GGCUU--G-- chl.Chl.re 1250 -------------------------------------------------- chl.Chl.re 1300 ----------UACUGACACU|GAG-AGACGAAAGCGAGGGGAGAGAAUGG chl.Chl.re 1350 G(AUU-A-GAUAC)-CCCAGUAU-|UC-CUC-GCCGUAAACGAUGGAU-- chl.Chl.re 1400 --AU|UA|GGUA-UUAGAU-------------------(--------cuu chl.Chl.re 1450 uaua-)-------------------------------------------- chl.Chl.re 1500 |------------------------------|--AUUUAGUACU-GAAGC chl.Chl.re 1550 (UAAC)GCAU-UAAAUAUCC|C|ACCUNGGGAGUAUGCUC(GCAA)GAGU chl.Chl.re 1600 GAAACUUAAAGGAAUUGACGGGGGCCC-GCACA-------AGCGGU|GGA chl.Chl.re 1650 GCAUGUGGUUUAAUUCG-(AUGCAACG)CGAAGAACCUUACCAGGACAUG chl.Chl.re 1700 ACU----AC|-AU-CUA--UA------CCUCUUU-----(GAA-A-)GAA chl.Chl.re 1750 GA-GAU------------------(ucua------)-------------- chl.Chl.re 1800 ---------------|AGGAU-GC|C|AGGUGGUGCAUG|GCU|GUCGUC chl.Chl.re 1850 A|-G-CUCGU|GCC(GUGA)GGUGUUGGG(UUAAGU)CCCGCAACGAGCG chl.Chl.re 1900 CAACCCUUG|UUUUUA-G-UU----------------------------- chl.Chl.re 1950 -------------------------------------------------- chl.Chl.re 2000 -------------------------------------------------- chl.Chl.re 2050 -----------------------------(--auuu----)--------- chl.Chl.re 2100 |----UUCUAGAAAUACUGCCGGU(GAUAA----)--------------- chl.Chl.re 2150 ---------ACCGGAGGAAGGUGAGGAUGACGUC-AA--GUCAUCAUGCC chl.Chl.re 2200 CCUUAAGUUCUGGGCUAC-ACACGUGCUACAACGGU--UAAGACAAUGAG chl.Chl.re 2250 AU----GCAAAACU--------------------(----GCAA-)----- chl.Chl.re 2300 --------------AGAU-GAGCCAACC-U-CAGAAACUUAAUCUCAGUU chl.Chl.re 2350 CGAAUUGUAGGC(--UGAAACUC)GCCUACAUGAAGUUGGAAUCGCU--- chl.Chl.re 2400 ---AGUAAU-CGCUGG(UC--AGCUAC)ACAGCGGUGAAUAC--GUU--- chl.Chl.re 2450 -----------------CCCGGGCCUUGUACACACCGCCCGUCACACCAC chl.Chl.re 2500 GGAAAUUGG-CUACACCCAAAGCUAUU---ACCUU-AACC-(--aa-aua chl.Chl.re 2550 ca-----)-GG-AGA-GGG-GU-AUCU-AAGG-UGGAGUUAAUAACUGGG chl.Chl.re 2600 GUGAAGUCGACnnnnnnnnnnnnnnnn(nnnn)nnnnnnnnnnnnnnnnn chl.Chl.re 2650 nnnnnn--|~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ chl.Chl.re 2700 ~~~~~~~~~~~~~~~~| chl.Ch.240 0 |---------nnnnGGAUCCGAG-UU(U-GA)UCCU|GGCUCAGGAUGAA chl.Ch.240 50 CGC-UGGCGGUAUGCCU--GACACAUGCAAGUCGAACG|AAA-------- chl.Ch.240 100 --------aga(uu------------------uuu-----)ucu------ chl.Ch.240 150 ----------------UUU-AGU--GGCGCACGGGUGAGUAA-CGCGUAA chl.Ch.240 200 GA-AUUUGC-CUUU------------------------------------ chl.Ch.240 250 -------------------------------------------------A chl.Ch.240 300 GGU---------AGAGAAUAACAA------------------------UU chl.Ch.240 350 G(GAAA)CGG-UUGCUAAUACU-CUAU-AU-------------------- chl.Ch.240 400 ------------------GCU-------(GGGA---)-------AGU--- chl.Ch.240 450 ---GAAAU----------------------AAUgug-ug-------(--- chl.Ch.240 500 ---uaa-cuau------)------ua-|-cacUUUGCCUAAAGA-GAA|G chl.Ch.240 550 -CUUGCGU|-CUGAUUA-GCCUGUUGG-UA-AG(A-UAAUAG)-CUUACC chl.Ch.240 600 AA|AGCUAUUAU|CAGUAGCUG|GUCU(GAGA)GGACAAACAGC|CACAC chl.Ch.240 650 CGGAA(CUUAGAUACG)GUCCGGA-C--UCC(UA-CG)GG-A--GGCAG- chl.Ch.240 700 CAGUGAGG-AAUUUUCCG-CAAU-GGGC-(-GAAA)-GCCU-GACGGA|G chl.Ch.240 750 CAAUACCGCGUGGAGGAUUAAAGCC(---CAUG--)GG-UU--GUAAACU chl.Ch.240 800 CC|UUUU-CUUAGAGGAGAAG---------(---GUc--)---------- chl.Ch.240 850 UGAcG|GU-AUCU-AAAGAA-UAAGCAUC|GGCU-AACU-CCGUG(CCA- chl.Ch.240 900 -GCAGCC|GCGGU---AA-)UACGGGG|GAUGCAAGCGUUAU-CCGGAAU chl.Ch.240 950 UAUUGGGU|GUAAAGCGUCUGUAGGUU|GCUUAUUUAAG|UCA-GUUGUU chl.Ch.240 1000 AAAUAUUAGGAC(------------------------------------- chl.Ch.240 1050 ---------------------------------UCA)AUCUUGA-AA-CA chl.Ch.240 1100 GCAAC--UGA-AAC-U|AUU-AA-G-CUAGAG-UU|GAGUA-----GAGG chl.Ch.240 1150 CAGAA|GGAACUCCGAG-UGUAGUG(GUGAAA)UGCGUAGAUA---UUCG chl.Ch.240 1200 GAAGAACACCGAA---GGC(GAAA)GC|A|UUCUG-CUG|GGCUA--U-- chl.Ch.240 1250 -------------------------------------------------- chl.Ch.240 1300 ----------UACUGACACU|GAG-AGACGAAAGCGAGGGGAGAGAAUGG chl.Ch.240 1350 G(AUU-A-GAUAC)-CCCAGUAU-|UC-CUC-GCCGUAAACGAUGGAU-- chl.Ch.240 1400 --AU|UA|GAUA-UUAGGUaa-----------------(--------uag chl.Ch.240 1450 aa---)-------------------------------------------- chl.Ch.240 1500 |-----------------------------u|ugAUCUAGUA-U-CGAAC chl.Ch.240 1550 (UAAC)GCGU-UAAAUAUCC|C|ACCUGGGGAGUAUGCUC(GCAA)GAGU chl.Ch.240 1600 GAAACUUAAAGGAAUUGACGGGG-CCC-GCACA-------AGCGGU|GGA chl.Ch.240 1650 GCAUGUGGUUUAAUUCG-(AUGCUACG)CGAAGAACCUUACCAGGACUUG chl.Ch.240 1700 ACU----AC|-AU-CUA--UA------CCUCUUU-----(GAA-A-)GAA chl.Ch.240 1750 GA-GAA------------------(ucuua-----)-------------- chl.Ch.240 1800 ---------------|AGGAU-GC|C|AGGUGGUGCAUG|GCU|GUCGUC chl.Ch.240 1850 A|-G-CUCGU|GCC(GUGA)GGUGUUGGG(UUAAGU)CCCGCAACGAGCG chl.Ch.240 1900 CAACCCUUG|UUCUUA-G-UU----------------------------- chl.Ch.240 1950 -------------------------------------------------- chl.Ch.240 2000 -------------------------------------------------- chl.Ch.240 2050 -----------------------------(--aaau----)--------- chl.Ch.240 2100 |----UUCUAAGAUUACUGCCGGU(GAUAA----)--------------- chl.Ch.240 2150 ---------ACCGGAGGAAGGUGAGGAUGACGUC-AA--GUCAUCAUGCC chl.Ch.240 2200 CCUUAAGUUCUGGGCUAC-ACACGUGCUACAACGGU--UAACACAAUGAG chl.Ch.240 2250 CU----GCAAUCUC--------------------(----GUAA-)----- chl.Ch.240 2300 --------------GAAA-GAGCUAACC-U-CAGAAAUUUAACCUCAGUU chl.Ch.240 2350 CUAAUUGUAAGC(--UGAAACUC)GCUUACAUGAAGCUGGAAUCGCU--- chl.Ch.240 2400 ---AGUAAU-CGCUGG(UC--AGCUAU)ACAGCGGUGAAUAC--GUU--- chl.Ch.240 2450 -----------------UCCGGGCCUUGUACACACCGCCCGUCACACCAC chl.Ch.240 2500 GGAAAUUAG-CUACACCCAAAGCUAUU---UACCUUAACC-(---u-aua chl.Ch.240 2550 u------)-GG-AGA-GGG-GU-AUCU-AAGG-UGGAGUUAAUAACUGGG chl.Ch.240 2600 GUGAAGUCGACnnnnnnnnnnnnnnnn(nnnn)nnnnnnnnnnnnnnnnn chl.Ch.240 2650 nnnnnn--|~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ chl.Ch.240 2700 ~~~~~~~~~~~~~~~~| chl.Ch.242 0 |---------nnnnGGAUCCGAG-UU(U-GA)UCCU|GGCUCAGGAUGAA chl.Ch.242 50 CGC-UGGCGGUAUGCCU--GACACAUGCAAGUCGAACG|AGA-------- chl.Ch.242 100 -------aaac(uu------------------u-------)guuu----- chl.Ch.242 150 ----------------UCU-AGU--GGCGCACGGGUGAGUAA-CGCGUAA chl.Ch.242 200 GA-AUCUAC-CUUU------------------------------------ chl.Ch.242 250 -------------------------------------------------A chl.Ch.242 300 GGU---------AGAGGAUAACAA------------------------UU chl.Ch.242 350 G(GAAA)CGA-UUGCUAAUACU-CUAU-AA-------------------- chl.Ch.242 400 ------------------GCU-------(GAGA---)-------AGU--- chl.Ch.242 450 ---GAAAU----------------------GAUaua-u--------(--- chl.Ch.242 500 -------uuau------)-------a-|-uauAUUGCCUAGAGA-UGA|G chl.Ch.242 550 -CUUGCGU|-CUGAUUA-GCCUGUUGG-UA-GG(G-UAAAAG)-CUUACC chl.Ch.242 600 AA|AGCUAUAAU|CAGUAGCUG|GUCU(GAGA)GGAUAGACAGC|CACAC chl.Ch.242 650 CGGAA(CUUAGAUACG)GUCCGGA-C--UCC(UA-CG)GG-A--GGCAG- chl.Ch.242 700 CAGUGAGG-AAUUUUCCG-CAAU-GGGC-(-GAAA)-GCCU-GACGGA|G chl.Ch.242 750 CAAUACCGCGUGGAGGAUGAAAGCC(---UAUG--)GG-UU--GUAAACU chl.Ch.242 800 CC|UUUU-CUUAGAGAAGAAG---------(---UUc--)---------- chl.Ch.242 850 UGAcG|GU-AUCU-AAAGAA-UAAGCAUC|GGCU-AACU-CCGUG(CCA- chl.Ch.242 900 -GCAGCC|GCGGU---AA-)UACGGGG|GAUGCAAGCGUUAU-CCGGAAU chl.Ch.242 950 UAUUGGGU|GUAAAGCGUCUGUAGGUU|GCUUACUUAAG|UCA-GUUGUU chl.Ch.242 1000 AAAUUUCAGAAC(------------------------------------- chl.Ch.242 1050 ---------------------------------UCA)AUUUUGA-UACCA chl.Ch.242 1100 GCAAC--UGA-AAC-U|AAU-AA-G-CUAGAG-UC|AAGUA-----GAGG chl.Ch.242 1150 UAGAA|GGAACUCCGAG-UGUAGCG(GUGAAA)UGCGUAGAUA---UUCG chl.Ch.242 1200 GAAGAACACCGAU---GGC(GAAA)GC|A|UUCUG-CUG|GACUU--G-- chl.Ch.242 1250 -------------------------------------------------- chl.Ch.242 1300 ----------UACUGACACU|GAG-AGACGAAAGCGAGGGGAGAGAAUGG chl.Ch.242 1350 G(AUU-A-GAUAC)-CCCAGUAU-|UC-CUC-GCCGUAAACGAUGGAU-- chl.Ch.242 1400 --AU|UA|GGUA-UUAGGUa------------------(--------aaa chl.Ch.242 1450 u----)-------------------------------------------- chl.Ch.242 1500 |------------------------------|-UAUUUAGUACU-GAAGC chl.Ch.242 1550 (UAAC)GCGU-UAAAUAUCC|C|ACCUGGGGAGUAUGCUC(GCAA)GAGU chl.Ch.242 1600 GAAACUUAAAGGAAUUGACGGGGGCCC-GCACA-------AGCGGU|GGA chl.Ch.242 1650 GCAUGUGGUUUAAUUCG-(AUGCAACG)CGAAGAACCUUACCAGGACUCG chl.Ch.242 1700 ACU----AC|-AU-CUA--UC------GCUCUUU-----(GAA-A-)GAA chl.Ch.242 1750 GA-GAU------------------(uguua-----)-------------- chl.Ch.242 1800 ---------------|AGGAU-GC|C|AGGUGGUGCAUG|GCU|GUCGUC chl.Ch.242 1850 A|-G-CUCGU|GCC(GUGA)GGUGUUGGG(UUAAGU)CCCGCAACGAGCG chl.Ch.242 1900 CAACCCUUG|UUUUUA-G-UU----------------------------- chl.Ch.242 1950 -------------------------------------------------- chl.Ch.242 2000 -------------------------------------------------- chl.Ch.242 2050 -----------------------------(--auuu----)--------- chl.Ch.242 2100 |----CUCUAAAAGUACUGCCGGU(GACAA----)--------------- chl.Ch.242 2150 ---------ACCGGAGGAAGGUGAGGAUGACGUC-AA--GUCAUCAUGCC chl.Ch.242 2200 CCUUAAGUUCUGGGCUAC-ACACGUGCUACAACGAU--UAAGACAAUGAG chl.Ch.242 2250 AU----GCAAUACU--------------------(----GCAA-)----- chl.Ch.242 2300 --------------AGAG-GAGCUAACC-U-CAGAAACUUAAUCUCAGUU chl.Ch.242 2350 CGAAUUGUAGGC(--UGAAACUC)GCCUACAUGAAGUUGGAAUCGCU--- chl.Ch.242 2400 ---AGUAAU-CGCUGG(UC--AGCUAC)ACAGCGGUGAAUAC--GUU--- chl.Ch.242 2450 -----------------CCCGGGCCUUGUACACACCGCCCGUCACACCAC chl.Ch.242 2500 GGAAAUUGG-CUACACCCAAAGCUAUU---ACCUU-AACC-(--aa-auu chl.Ch.242 2550 ua-----)-GG-AGA-GGG-GU-AUCU-AAGG-UGGAGUUAAUAACUGGG chl.Ch.242 2600 GUGAAGUCGACnnnnnnnnnnnnnnnn(nnnn)nnnnnnnnnnnnnnnnn chl.Ch.242 2650 nnnnnn--|~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ chl.Ch.242 2700 ~~~~~~~~~~~~~~~~| (3)-Crypto 0 | (3)-Crypto 23 - (3)-Crypto 85 -- (3)-Crypto 88 - (3)-Crypto 103 --------------------------------------------- (3)-Crypto 148 - (3)-Crypto 156 --------- (3)-Crypto 173 -- (3)-Crypto 178 ------------------- (3)-Crypto 297 -- (3)-Crypto 303 --------- (3)-Crypto 316 -------- (3)-Crypto 324 --------- (3)-Crypto 345 --- (3)-Crypto 354 -- (3)-Crypto 360 - (3)-Crypto 371 - (3)-Crypto 375 - (3)-Crypto 378 - (3)-Crypto 380 --------------------------- (3)-Crypto 412 - (3)-Crypto 422 ---- (3)-Crypto 426 -- (3)-Crypto 438 ------ (3)-Crypto 462 ------------------ (3)-Crypto 491 - (3)-Crypto 494 - (3)-Crypto 499 - (3)-Crypto 507 -- (3)-Crypto 538 - (3)-Crypto 544 - (3)-Crypto 550 - (3)-Crypto 569 -- (3)-Crypto 581 - (3)-Crypto 585 - (3)-Crypto 606 ----- (3)-Crypto 612 - (3)-Crypto 618 | (3)-Crypto 633 | (3)-Crypto 639 | (3)-Crypto 643 -- (3)-Crypto 666 - (3)-Crypto 677 - (3)-Crypto 680 | (3)-Crypto 684 - (3)-Crypto 690 - (3)-Crypto 692 -- (3)-Crypto 698 --- (3)-Crypto 715 - (3)-Crypto 718 - (3)-Crypto 730 - (3)-Crypto 734 -------------------------------------- (3)-Crypto 772 ---------------------- (3)-Crypto 805 ------- (3)-Crypto 822 - (3)-Crypto 828 - (3)-Crypto 830 | (3)-Crypto 833 ----- (3)-Crypto 841 ------------- (3)-Crypto 854 -- (3)-Crypto 866 - (3)-Crypto 889 - (3)-Crypto 899 --- (3)-Crypto 907 - (3)-Crypto 913 --- (3)-Crypto 918 -| (3)-Crypto 926 | (3)-Crypto 931 - (3)-Crypto 942 - (3)-Crypto 958 | (3)-Crypto 988 - (3)-Crypto 990 | (3)-Crypto 993 - (3)-Crypto 1074 --------- (3)-Crypto 1086 - (3)-Crypto 1089 - (3)-Crypto 1097 - (3)-Crypto 1099 | (3)-Crypto 1105 --- (3)-Crypto 1116 - (3)-Crypto 1120 - (3)-Crypto 1123 - (3)-Crypto 1125 ---- (3)-Crypto 1131 |- (3)-Crypto 1142 ---- (3)-Crypto 1164 - (3)-Crypto 1165 ------ (3)-Crypto 1177 - (3)-Crypto 1183 -------------------------------------|----- (3)-Crypto 1226 -------------- (3)-Crypto 1243 - (3)-Crypto 1245 -- (3)-Crypto 1299 ----------- (3)-Crypto 1314 - (3)-Crypto 1320 - (3)-Crypto 1325 | (3)-Crypto 1355 - (3)-Crypto 1361 ------- (3)-Crypto 1371 | (3)-Crypto 1373 -- (3)-Crypto 1383 - (3)-Crypto 1387 - (3)-Crypto 1398 ---- (3)-Crypto 1404 - (3)-Crypto 1412 - (3)-Crypto 1415 - (3)-Crypto 1421 - (3)-Crypto 1427 --------------------- (3)-Crypto 1452 --- (3)-Crypto 1464 -- (3)-Crypto 1467 -- (3)-Crypto 1474 ---- (3)-Crypto 1479 -- (3)-Crypto 1483 -- (3)-Crypto 1487 ------------ (3)-Crypto 1499 --------------------------------- (3)-Crypto 1536 ------------ (3)-Crypto 1560 - (3)-Crypto 1565 | (3)-Crypto 1572 | (3)-Crypto 1575 - (3)-Crypto 1595 - (3)-Crypto 1626 - (3)-Crypto 1646 - (3)-Crypto 1675 ------ (3)-Crypto 1682 ------- (3)-Crypto 1704 --- (3)-Crypto 1709 | (3)-Crypto 1713 - (3)-Crypto 1721 ------ (3)-Crypto 1736 --- (3)-Crypto 1743 - (3)-Crypto 1752 - (3)-Crypto 1767 ------- (3)-Crypto 1777 --------- (3)-Crypto 1787 --- (3)-Crypto 1790 ----- (3)-Crypto 1802 ------------- (3)-Crypto 1821 -- (3)-Crypto 1824 | (3)-Crypto 1832 --- (3)-Crypto 1842 ---------- (3)-Crypto 1865 -- (3)-Crypto 1868 -- (3)-Crypto 1871 -- (3)-Crypto 1883 ---------- (3)-Crypto 1893 ------ (3)-Crypto 1901 - (3)-Crypto 1916 - (3)-Crypto 1924 - (3)-Crypto 1937 - (3)-Crypto 1939 -- (3)-Crypto 1959 -------------------------------------- (3)-Crypto 1997 -------------------------------------------------- (3)-Crypto 2047 -------------------------------- (3)-Crypto 2087 --- (3)-Crypto 2093 -- (3)-Crypto 2114 ||| (3)-Crypto 2130 ---- (3)-Crypto 2136 ------ (3)-Crypto 2142 - (3)-Crypto 2153 ------ (3)-Crypto 2187 -- (3)-Crypto 2218 - (3)-Crypto 2237 - (3)-Crypto 2253 --- (3)-Crypto 2264 -------------------- (3)-Crypto 2285 ---- (3)-Crypto 2293 - (3)-Crypto 2328 - (3)-Crypto 2363 -- (3)-Crypto 2397 ------ (3)-Crypto 2420 - (3)-Crypto 2443 - (3)-Crypto 2448 ------------------- (3)-Crypto 2527 --- (3)-Crypto 2561 - (3)-Crypto 2577 - (3)-Crypto 2582 - (3)-Crypto 2657 - (3)-Crypto 2716 | chl.Cry.sp 0 |---------AAAUCAUGGAGAG-UU(U-GA)UCCU|GGCUCAGGAUGAA chl.Cry.sp 50 CGC-UGGCGGUAUGCUU--AACACAUGCAAGUCGUACG|AA--------- chl.Cry.sp 100 -------aguu(uu------------------u-------)aacu----- chl.Cry.sp 150 ----------------UU--AGU--GGCGGACGGGUGAGUAA-CACGUGA chl.Cry.sp 200 GA-AUCUAC-CCUU------------------------------------ chl.Cry.sp 250 ----------------------------------------------aggA chl.Cry.sp 300 GGA---------GGGGGAUAACAG------------------------CU chl.Cry.sp 350 G(GAAA)CGG-CUGCUAAUACU-CCAU-AU-------------------- chl.Cry.sp 400 ------------------GCU-------(GAAG---)-------AGU--- chl.Cry.sp 450 ---GAAA-----------------------GG--------------(--- chl.Cry.sp 500 -----g-aaa-------)---------|-----CCaCCUAAGGA-AGA|G chl.Cry.sp 550 -CUCGCGU|-CUGAUUA-GCUAGUUGG-UA-GG(G-UAAGGG)-CCUACC chl.Cry.sp 600 AA|GGCGACGAU|CAGUAGCUG|GUUU(GAGA)GGACGAUCAGC|CACAC chl.Cry.sp 650 UGGGA(CUGAGACACG)GCCCAGA-C--UCC(UA-CG)GG-A--GGCAG- chl.Cry.sp 700 CAGUGGGG-AAUUUUCCG-CAAU-GGGC-(-GCAA)-GCCU-GACGGA|G chl.Cry.sp 750 CAAUACCGCGUGAGGGAUGAAGGCC(---UGUG--)GG-UU--GUAAACC chl.Cry.sp 800 UC|UUUU-CUCAAGGAAGAAGU--------(--------)--------UC chl.Cry.sp 850 UGACG|GU-ACUU-GAGGAA-UAAGCAUC|GGCU-AACU-CUGUG(CCA- chl.Cry.sp 900 -GCAGCC|GCGGU---AA-)UACAGAG|GAUGCAAGCGUUAU-CCGGAAU chl.Cry.sp 950 UACUGGGC|AUAAAGCGUCUGUAGGUU|GUUUAGUAAG-|UCU-GCUGUU chl.Cry.sp 1000 AAAGACUAGGGC(------------------------------------- chl.Cry.sp 1050 ---------------------------------UUA)ACCCUAG-AA-AA chl.Cry.sp 1100 GCAGU--GGA-AAC-U|GCU-AG-A-CUUGAG-UG|UGGUA-----GAGG chl.Cry.sp 1150 UAGAG|GGAAUUCCUAG-UGUAGCG(GUGAAA)UGCGUAGAUA---UUAG chl.Cry.sp 1200 GAAGAACACCAAU---GGC(GAAA)GC|A|CUUUA-CUG|GGCCA--U-- chl.Cry.sp 1250 -------------------------------------------------- chl.Cry.sp 1300 ----------AACUGACACU|GAG-AGACGACAGCUAGGGGAGCAAAUGG chl.Cry.sp 1350 G(AUU-A-GAUAC)-CCCAGUAG-|UC-CUA-GCCGUAAACUAUGGAU-- chl.Cry.sp 1400 --AC|UA|GAUG-UUGUACG------------------(-------uauu chl.Cry.sp 1450 aacc-)-------------------------------------------- chl.Cry.sp 1500 |------------------------------|-CGUACAGUAUC-GUAGC chl.Cry.sp 1550 (UAAG)GCGU-UAAGUAUCC|C|GCCUGGGAAGUACGCUC(GCAA)GAGU chl.Cry.sp 1600 GAAACUCAAAGGAAUUGACGGGGGCCC-GCACA-------AGCGGU|GGA chl.Cry.sp 1650 GUAUGUGGUUUAAUUCG-(AUGCAACG)CGAAGAACCUUACCAGGGUUUG chl.Cry.sp 1700 ACA----UG|-UC-ACA--AA------UUUUCUU-----(GAA-A-)AAG chl.Cry.sp 1750 AA-AAG---UG--CC---------(UUCG------)---------GGAA- chl.Cry.sp 1800 ---------------|UGUGAACA|C|AGGUGGUGCAUG|GCU|GUCGUC chl.Cry.sp 1850 A|-G-CUCGU|GUC(GUGA)GAUGUUGGG(UUAAGU)CCCGCAACGAGCG chl.Cry.sp 1900 UAACCCUUG|UUUUUA-G-UUGCCa-uca--------------------- chl.Cry.sp 1950 -------------------------------------------------- chl.Cry.sp 2000 -------------------------------------------------- chl.Cry.sp 2050 -----------------------------(-uuaagu---)-------ug chl.Cry.sp 2100 |GGCACUUUAAAAAGACUGCCGGU(GAUAA----)--------------- chl.Cry.sp 2150 ---------ACCGGAGGAAGGUGAGGACGACGUC-AA--GUCAGCAUGCC chl.Cry.sp 2200 CCUUACACUCUGGGCUAC-ACACGUACUACAAUGGU--CGAGACAAAAAG chl.Cry.sp 2250 UC----GCAAACUU--------------------(----GUGA-)----- chl.Cry.sp 2300 --------------AAGU-AAGCUAAUC-UUAU-AAACUCGAUCUCAGUU chl.Cry.sp 2350 CGGAUUGCAGGC(--UGCAACUC)GCCUGCAUGAAGUUGGAAUCGCU--- chl.Cry.sp 2400 ---AGUAAU-CGCCGG(UC--AGCUAU)ACGGCGGUGAAUCC--GUU--- chl.Cry.sp 2450 -----------------CCCGGGCCUUGUACACACCGCCCGUCACACCAU chl.Cry.sp 2500 GGAAGCUAG-UCAUACCCAAAGUCGUU---ACCUU-AACC-(-----auu chl.Cry.sp 2550 c------)-GG-AGG-GGG-GC-GCCU-AAGG-UAGGGUUAGUGACUGGG chl.Cry.sp 2600 GUGAAGUCGUAACAAGGUAGCCGUACU(GGAA)GGUGCGGCUGGAUCACC chl.Cry.sp 2650 UCCUUA--|~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ chl.Cry.sp 2700 ~~~~~~~~~~~~~~~~| chl.G.th.1 0 |------uggAAAUCAUGGAGAG-UU(U-GA)UCCU|GGCUCAGGAUGAA chl.G.th.1 50 CGC-UGGCGGUAUGCUU--AACACAUGCAAGUCGUACG|AA--------- chl.G.th.1 100 --------agu(uu------------------uu------)aacu----- chl.G.th.1 150 ----------------UU--AGU--GGCGGACGGGUGAGUAA-CACGUGA chl.G.th.1 200 GA-AUCUAC-CCUU------------------------------------ chl.G.th.1 250 -------------------------------------------------A chl.G.th.1 300 GGA---------GGAGGAUAACAG------------------------CU chl.G.th.1 350 G(GAAA)CGG-CUGCUAAUACU-CCAU-AU-------------------- chl.G.th.1 400 ------------------GCU-------(GAAG---)-------AGU--- chl.G.th.1 450 ---GAAA-----------------------GG--------------(--- chl.G.th.1 500 -----g-aaa-------)---------|----CCA-CCUAAGGA-AGA|G chl.G.th.1 550 -CUCGCGU|-CUGAUUA-GCUAGUUGG-UA-GG(G-UAAGGG)-CCUACC chl.G.th.1 600 AA|GGCGACGAU|CAGUAGCUG|GUUU(GAGA)GGACGAUCAGC|CACAC chl.G.th.1 650 UGGGA(CUGAGACACG)GCCCAGA-C--UCC(UA-CG)GG-A--GGCAG- chl.G.th.1 700 CAGUGGGG-AAUUUUCCG-CAAU-GGGC-(-Gcaa)-GCCU-GACGGA|G chl.G.th.1 750 CAAUACCGCGUGAGGGAUGAAGGCC(---UGUG--)GG-UU--GUAAACC chl.G.th.1 800 UC|UUUU-CUCAAGGAAGAAGU--------(--------)--------UC chl.G.th.1 850 UGACG|GU-ACUU-GAGGAA-UAAGCAUC|GGCU-AACU-CUGUG(CCA- chl.G.th.1 900 -GCAGCC|GCGGU---AA-)UACAGAG|GAUGCAAGCGUUAU-CCGGAAU chl.G.th.1 950 UACUGGGC|AUAAAGCGUCUGUAGGUU|GUUUAGUAAG-|UCU-GCUGUU chl.G.th.1 1000 AAAGACUAGGGC(------------------------------------- chl.G.th.1 1050 ---------------------------------UUA)ACCCUAG-AA-AA chl.G.th.1 1100 GCAGU--GGA-AAC-U|GCU-AG-A-CUUGAG-UG|UGGUA-----GAGG chl.G.th.1 1150 UAGAG|GGAAUUCCUAG-UGUAGCG(GUGAAA)UGCGUAGAUA---UUAG chl.G.th.1 1200 GAAGAACACCAAU---GGC(GAAA)GC|A|CUUUA-CUG|GGCCA--U-- chl.G.th.1 1250 -------------------------------------------------- chl.G.th.1 1300 ----------AACUGACACU|GAG-AGACGACAGCUAGGGGAGCAAAUGG chl.G.th.1 1350 G(AUU-A-GAUAC)-CCCAGUAG-|UC-CUA-GCCGUAAACUAUGGAU-- chl.G.th.1 1400 --AC|UA|GAUG-UUGUACG------------------(-------uauu chl.G.th.1 1450 aacc-)-------------------------------------------- chl.G.th.1 1500 |------------------------------|-CGUACAGUAUC-GUAGC chl.G.th.1 1550 (UAAG)GCGU-UAAGUAUCC|C|GCCUGGGAAGUACGCUC(GCAA)GAGU chl.G.th.1 1600 GAAACUCAAAGGAAUUGACGGGGGCCC-GCACA-------AGCGGU|GGA chl.G.th.1 1650 GUAUGUGGUUUAAUUCG-(AUGCAACG)CGAAGAACCUUACCAGGGUUUG chl.G.th.1 1700 ACA----UG|-UC-ACA--AA------UUUUCUU-----(GAA-A-)AAG chl.G.th.1 1750 AA-AAG---UG--CC---------(UUCG------)---------GGAA- chl.G.th.1 1800 ---------------|UGUGAACA|C|AGGUGGUGCAUG|GCU|GUCGUC chl.G.th.1 1850 A|-G-CUCGU|GUC(GUGA)GAUGUUGGG(UUAAGU)CCCGCAACGAGCG chl.G.th.1 1900 UAACCCUUG|UUUUUA-G-UUGCCA-Uca--------------------- chl.G.th.1 1950 -------------------------------------------------- chl.G.th.1 2000 -------------------------------------------------- chl.G.th.1 2050 -----------------------------(-uuaagu---)-------ug chl.G.th.1 2100 |GGCACUUUAAAAAGACUGCCGGU(GAUAA----)--------------- chl.G.th.1 2150 ---------ACCGGAGGAAGGUGAGGACGACGUC-AA--GUCAGCAUGCC chl.G.th.1 2200 CCUUACACUCUGGGCUAC-ACACGUACUACAAUGGU--CGAGACAAAAAG chl.G.th.1 2250 UC----GCAAACUU--------------------(----GUGA-)----- chl.G.th.1 2300 --------------AAGU-AAGCUAAUC-UUAU-AAACUCGAUCUCAGUU chl.G.th.1 2350 CGGAUUGCAGGC(--UGCAACUC)GCCUGCAUGAAGUUGGAAUCGCU--- chl.G.th.1 2400 ---AGUAAU-CGCCGG(UC--AGCUAU)ACGGCGGUGAAUCC--GUU--- chl.G.th.1 2450 -----------------CCCGGGCCUUGUACACACCGCCCGUCACACCAU chl.G.th.1 2500 GGAAGCUAG-UCAUACCCAAAGUCGUU---ACCUU-AACC-(-----auu chl.G.th.1 2550 c------)-GG-AGG-GGG-GC-GCCU-AAGG-UAGGGUUAGUGACUGGG chl.G.th.1 2600 GUGAAGUCGUAACAAGGUAGCCGUACU(GGAA)GGUGCGGCUGGAUCACC chl.G.th.1 2650 UCCUU---|~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ chl.G.th.1 2700 ~~~~~~~~~~~~~~~~| chl.G.th.2 0 |-------ggAAAUCAUGGAGAG-UU(U-GA)UCCU|GGCUCAGGAUGAA chl.G.th.2 50 CGC-UGGCGGUAUGCUU--AACACAUGCAAGUCGUACG|AA--------- chl.G.th.2 100 --------agu(uu------------------uu------)aacu----- chl.G.th.2 150 ----------------UU--AGU--GGCGGACGGGUGAGUAA-CACGUGA chl.G.th.2 200 GA-AUCUAC-CCUU------------------------------------ chl.G.th.2 250 -------------------------------------------------A chl.G.th.2 300 GGA---------GGAGGAUAACAG------------------------CU chl.G.th.2 350 G(GAAA)CGG-CUGCUAAUACU-CCAU-AU-------------------- chl.G.th.2 400 ------------------GCU-------(GAAG---)-------AGU--- chl.G.th.2 450 ---GAAA-----------------------GG--------------(--- chl.G.th.2 500 -----g-aaa-------)---------|----CCA-CCUAAGGA-AGA|G chl.G.th.2 550 -CUCGCGU|-CUGAUUA-GCUAGUUGG-UA-GG(G-UAAGGG)-CCUACC chl.G.th.2 600 AA|GGCGACGAU|CAGUAGCUG|GUUU(GAGA)GGACGAUCAGC|CACAC chl.G.th.2 650 UGGGA(CUGAGACACG)GCCCAGA-C--UCC(UA-CG)GG-A--GGCAG- chl.G.th.2 700 CAGUGGGG-AAUUUUCCG-CAAU-GGGC-(-Gcaa)-GCCU-GACGGA|G chl.G.th.2 750 CAAUACCGCGUGAGGGAUGAAGGCC(---UGUG--)GG-UU--GUAAACC chl.G.th.2 800 UC|UUUU-CUCAAGGAAGAAGU--------(--------)--------UC chl.G.th.2 850 UGACG|GU-ACUU-GAGGAA-UAAGCAUC|GGCU-AACU-CUGUG(CCA- chl.G.th.2 900 -GCAGCC|GCGGU---AA-)UACAGAG|GAUGCAAGCGUUAU-CCGGAAU chl.G.th.2 950 UACUGGGC|AUAAAGCGUCUGUAGGUU|GUUUAGUAAG-|UCU-GCUGUU chl.G.th.2 1000 AAAGACUAGGGC(------------------------------------- chl.G.th.2 1050 ---------------------------------UCA)ACCCUAG-AA-AA chl.G.th.2 1100 GCAGU--GGA-AAC-U|GCU-AG-A-CUUGAG-UG|UGGUA-----GAGG chl.G.th.2 1150 UAGAG|GGAAUUCCUAG-UGUAGCG(GUGAAA)UGCGUAGAUA---UUAG chl.G.th.2 1200 GAAGAACACCAAU---GGC(GAAA)GC|A|CUUUA-CUG|GGCCA--U-- chl.G.th.2 1250 -------------------------------------------------- chl.G.th.2 1300 ----------AACUGACACU|GAG-AGACGACAGCUAGGGGAGCAAAUGG chl.G.th.2 1350 G(AUU-A-GAUAC)-CCCAGUAG-|UC-CUA-GCCGUAAACUAUGGAU-- chl.G.th.2 1400 --AC|UA|GAUG-UUGUACG------------------(-------uauu chl.G.th.2 1450 aacc-)-------------------------------------------- chl.G.th.2 1500 |------------------------------|-CGUACAGUAUC-GUAGC chl.G.th.2 1550 (UAAG)GCGU-UAAGUAUCC|C|GCCUGGGAAGUACGCUC(GCAA)GAGU chl.G.th.2 1600 GAAACUCAAAGGAAUUGACGGGGGCCC-GCACA-------AGCGGU|GGA chl.G.th.2 1650 GUAUGUGGUUUAAUUCG-(AUGCAACG)CGAAGAACCUUACCAGGGUUUG chl.G.th.2 1700 ACA----UG|-UC-ACA--AA------UUUUCUU-----(GAA-A-)AAG chl.G.th.2 1750 AA-AAG---UG--CC---------(UUCG------)---------GGAA- chl.G.th.2 1800 ---------------|UGUGAACA|C|AGGUGGUGCAUG|GCU|GUCGUC chl.G.th.2 1850 A|-G-CUCGU|GUC(GUGA)GAUGUUGGG(UUAAGU)CCCGCAACGAGCG chl.G.th.2 1900 UAACCCUUG|UUUUUA-G-UUGCCA-Uca--------------------- chl.G.th.2 1950 -------------------------------------------------- chl.G.th.2 2000 -------------------------------------------------- chl.G.th.2 2050 -----------------------------(-uuaagu---)-------ug chl.G.th.2 2100 |GGCACUUUAAAAAGACUGCCGGU(GAUAA----)--------------- chl.G.th.2 2150 ---------ACCGGAGGAAGGUGAGGACGACGUC-AA--GUCAGCAUGCC chl.G.th.2 2200 CCUUACACUCUGGGCUAC-ACACGUACUACAAUGGU--CGAGACAAAAAG chl.G.th.2 2250 UC----GCAAACUU--------------------(----GUGA-)----- chl.G.th.2 2300 --------------AAGU-AAGCUAAUC-UUAU-AAACUCGAUCUCAGUU chl.G.th.2 2350 CGGAUUGCAGGC(--UGCAACUC)GCCUGCAUGAAGUUGGAAUCGCU--- chl.G.th.2 2400 ---AGUAAU-CGCCGG(UC--AGCUAU)ACGGCGGUGAAUCC--GUU--- chl.G.th.2 2450 -----------------CCCGGGCCUUGUACACACCGCCCGUCACACCAU chl.G.th.2 2500 GGAAGCUAG-UCAUACCCAAAGUCGUU---ACCUU-AACC-(-----auu chl.G.th.2 2550 c------)-GG-AGG-GGG-GC-GCCU-AAGG-UAGGGUUAGUGACUGGG chl.G.th.2 2600 GUGAAGUCGUAACAAGGUAGCCGUACU(GGAA)GGUGCGGCUGGAUCACC chl.G.th.2 2650 UCCUUA--|~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ chl.G.th.2 2700 ~~~~~~~~~~~~~~~~| chl.P.sali 0 |---------auAUCAUGGAGAG-UU(U-GA)UCCU|GGCUCAGGAUGAA chl.P.sali 50 CGC-UGGCGGUAUGCUU--AACACAUGCAAGUUGCACG|AG--------- chl.P.sali 100 --------agu(uu------------------uu------)aacu----- chl.P.sali 150 ----------------CU--AGU--AGCGGACGGGUGAGUAA-CACGUGA chl.P.sali 200 GA-AUCUGC-CCUU------------------------------------ chl.P.sali 250 -------------------------------------------------A chl.P.sali 300 GGA---------GGAGGAUAACAG------------------------CU chl.P.sali 350 G(GAAA)CGG-CUGCUAAUACU-CCAU-AU-------------------- chl.P.sali 400 ------------------GCU-------(GAAA---)-------AGU--- chl.P.sali 450 ---GAAA-----------------------GGA-------------(--- chl.P.sali 500 -----u-uua-------)---------|----UCUGCCUAAGGA-GGA|G chl.P.sali 550 -CUCGCGU|-CUGAUUA-GCUAGUUGG-UG-AG(A-UAAAAG)-CUCACC chl.P.sali 600 AA|GGCGACGAU|CAGUAGCUG|GUUU(GAGA)GGACGAUCAGC|CACAC chl.P.sali 650 UGGGA(CUGAGACACG)GCCCAGA-C--UCC(UA-CG)GG-A--GGCAG- chl.P.sali 700 CAGUGGGG-AAUUUUCCG-CAAU-GGGC-(-GAAA)-G-CU-GACGGA|G chl.P.sali 750 CAAUACCGCGUGAGGGAUGAAAGCC(---UGUG--)GG-UU--GUAAACC chl.P.sali 800 UC|UUUU-CUCAAGGAAGAAGU--------(--------)--------UC chl.P.sali 850 UGACG|GU-ACUU-GAGGAA-UAAGCAUC|GGCU-AACU-CUGUG(CCA- chl.P.sali 900 -GCAGCC|GCGGU---AA-)UACAGAG|GAUGCAAGCGUUAU-CCGGAAU chl.P.sali 950 CACUGGGC|AUAAAGCGUCUGUAGGUU|GUUUGGUAAG-|UCU-GCUGUU chl.P.sali 1000 AAAUACUAGGGC(------------------------------------- chl.P.sali 1050 ---------------------------------UUA)ACCCUAG-GC-CA chl.P.sali 1100 GCAGU--GGA-AAC-U|CUG-AG-C-AUUGAG-UA|UGGUA-----GAGG chl.P.sali 1150 UAGAG|GGAAUUCCUAG-UGUAGCG(GUGAAA)UGCGUAGAUA---UUAG chl.P.sali 1200 GAAGAACACCAAU---GGC(GAAA)AC|G|CUCUA-CUG|GGCCA--U-- chl.P.sali 1250 -------------------------------------------------- chl.P.sali 1300 ----------AACUGACACU|CAG-AGACGACAGCUAGGGGAGCAAAUGG chl.P.sali 1350 G(AUU-A-GAUAC)-CCCAGUAG-|UC-CUA-GCCGUAAACGAUGGAU-- chl.P.sali 1400 --AC|UA|GGUG-UUGCACG------------------(-------uauu chl.P.sali 1450 aacc-)-------------------------------------------- chl.P.sali 1500 |------------------------------|-CGUGCAGUAUC-GUAGC chl.P.sali 1550 (UAAG)GCGU-UAAGUAUCC|C|GCCUGGGAAGUACGCUC(GCAA)GAGU chl.P.sali 1600 GAAACUCAAAGGAAUUGACGGGGGCCC-GCACA-------AGCGGU|GGA chl.P.sali 1650 GUAUGUGGUUUAAUUCG-(AUGCAACG)CGAAGAACCUUACCAGGGCUUG chl.P.sali 1700 ACA----UG|-UC-ACG--AA------UCUUUCC-----(GAA-A-)AGA chl.P.sali 1750 AA-GAG---UG--CC---------(UUCG------)---------GGAA- chl.P.sali 1800 ---------------|CGUGAACA|C|AGGUGGUGCAUG|GCU|GUCGUC chl.P.sali 1850 A|-G-CUCGU|GUC(GUGA)GAUGUUGGG(UUAAGU)CCCGCAACGAGCG chl.P.sali 1900 UAACCCUUG|UUUUUA-G-UUGCCA-Uca--------------------- chl.P.sali 1950 -------------------------------------------------- chl.P.sali 2000 -------------------------------------------------- chl.P.sali 2050 -----------------------------(-uuuagu---)-------ug chl.P.sali 2100 |GGCACUUUAAAGAGACUGCCGGU(GAUAA----)--------------- chl.P.sali 2150 ---------ACCGGAGGAAGGUGAGGACGACGUC-AA--GUCAGCAUGCC chl.P.sali 2200 CCUUACGCCCUGGGCUAC-ACACGUACUACAAUGGU--CGAGACAAAGAG chl.P.sali 2250 CU----GCAAGUCU--------------------(----GCAA-)----- chl.P.sali 2300 --------------AGCA-AAGCUAAUC-UCAU-AAACUCGGUCUCAGUU chl.P.sali 2350 CGGAUUGCAGGC(--UGCAACUC)GCCUGCAUGAAGGUGGAAUCGCU--- chl.P.sali 2400 ---AGUAAU-CGCCGG(UC--AGCAAU)ACGGCGGUGAAUC---GUU--- chl.P.sali 2450 -----------------CCCGGGCCUUGUACACACCGCCCGUCACACCAU chl.P.sali 2500 GGAAGCUAG-CCACACCCAAAGUCGUU---ACCUU-AACC-(-----auu chl.P.sali 2550 u------)-GG-AGG-GGG-GC-GCCU-AAGG-UAGGGUUAGUGACUGGG chl.P.sali 2600 GUGAAGUCGUAACAAGGUAGCCGUACU(GGAA)GGUGCGGCUGGAUCACC chl.P.sali 2650 UCCUUU--|~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ chl.P.sali 2700 ~~~~~~~~~~~~~~~~| (3)-Glauco 0 | (3)-Glauco 23 - (3)-Glauco 85 -- (3)-Glauco 88 - (3)-Glauco 103 --------------------------------------------- (3)-Glauco 148 - (3)-Glauco 156 --------- (3)-Glauco 173 -- (3)-Glauco 178 ------------------- (3)-Glauco 297 -- (3)-Glauco 303 --------- (3)-Glauco 316 -------- (3)-Glauco 324 --------- (3)-Glauco 345 --- (3)-Glauco 354 -- (3)-Glauco 360 - (3)-Glauco 371 - (3)-Glauco 375 - (3)-Glauco 378 - (3)-Glauco 380 --------------------------- (3)-Glauco 412 - (3)-Glauco 422 ---- (3)-Glauco 426 -- (3)-Glauco 438 ------ (3)-Glauco 462 ------------------ (3)-Glauco 491 - (3)-Glauco 494 - (3)-Glauco 499 - (3)-Glauco 507 -- (3)-Glauco 538 - (3)-Glauco 544 - (3)-Glauco 550 - (3)-Glauco 569 -- (3)-Glauco 581 - (3)-Glauco 585 - (3)-Glauco 606 ----- (3)-Glauco 612 - (3)-Glauco 618 | (3)-Glauco 633 | (3)-Glauco 639 | (3)-Glauco 643 -- (3)-Glauco 666 - (3)-Glauco 677 - (3)-Glauco 680 | (3)-Glauco 684 - (3)-Glauco 690 - (3)-Glauco 692 -- (3)-Glauco 698 --- (3)-Glauco 715 - (3)-Glauco 718 - (3)-Glauco 730 - (3)-Glauco 734 -------------------------------------- (3)-Glauco 772 ---------------------- (3)-Glauco 805 ------- (3)-Glauco 822 - (3)-Glauco 828 - (3)-Glauco 830 | (3)-Glauco 833 ----- (3)-Glauco 841 ------------- (3)-Glauco 854 -- (3)-Glauco 866 - (3)-Glauco 889 - (3)-Glauco 899 --- (3)-Glauco 907 - (3)-Glauco 913 --- (3)-Glauco 918 -| (3)-Glauco 926 | (3)-Glauco 931 - (3)-Glauco 942 - (3)-Glauco 958 | (3)-Glauco 988 - (3)-Glauco 990 | (3)-Glauco 993 - (3)-Glauco 1074 --------- (3)-Glauco 1086 - (3)-Glauco 1089 - (3)-Glauco 1097 - (3)-Glauco 1099 | (3)-Glauco 1105 --- (3)-Glauco 1116 - (3)-Glauco 1120 - (3)-Glauco 1123 - (3)-Glauco 1125 ---- (3)-Glauco 1131 |- (3)-Glauco 1142 ---- (3)-Glauco 1164 - (3)-Glauco 1165 ------ (3)-Glauco 1177 - (3)-Glauco 1183 -------------------------------------|----- (3)-Glauco 1226 -------------- (3)-Glauco 1243 - (3)-Glauco 1245 -- (3)-Glauco 1299 ----------- (3)-Glauco 1314 - (3)-Glauco 1320 - (3)-Glauco 1325 | (3)-Glauco 1355 - (3)-Glauco 1361 ------- (3)-Glauco 1371 | (3)-Glauco 1373 -- (3)-Glauco 1383 - (3)-Glauco 1387 - (3)-Glauco 1398 ---- (3)-Glauco 1404 - (3)-Glauco 1412 - (3)-Glauco 1415 - (3)-Glauco 1421 - (3)-Glauco 1427 --------------------- (3)-Glauco 1452 --- (3)-Glauco 1464 -- (3)-Glauco 1467 -- (3)-Glauco 1474 ---- (3)-Glauco 1479 -- (3)-Glauco 1483 -- (3)-Glauco 1487 ------------ (3)-Glauco 1499 --------------------------------- (3)-Glauco 1536 ------------ (3)-Glauco 1560 - (3)-Glauco 1565 | (3)-Glauco 1572 | (3)-Glauco 1575 - (3)-Glauco 1595 - (3)-Glauco 1626 - (3)-Glauco 1646 - (3)-Glauco 1675 ------ (3)-Glauco 1682 ------- (3)-Glauco 1704 --- (3)-Glauco 1709 | (3)-Glauco 1713 - (3)-Glauco 1721 ------ (3)-Glauco 1736 --- (3)-Glauco 1743 - (3)-Glauco 1752 - (3)-Glauco 1767 ------- (3)-Glauco 1777 --------- (3)-Glauco 1787 --- (3)-Glauco 1790 ----- (3)-Glauco 1802 ------------- (3)-Glauco 1821 -- (3)-Glauco 1824 | (3)-Glauco 1832 --- (3)-Glauco 1842 ---------- (3)-Glauco 1865 -- (3)-Glauco 1868 -- (3)-Glauco 1871 -- (3)-Glauco 1883 ---------- (3)-Glauco 1893 ------ (3)-Glauco 1901 - (3)-Glauco 1916 - (3)-Glauco 1924 - (3)-Glauco 1937 - (3)-Glauco 1939 -- (3)-Glauco 1959 -------------------------------------- (3)-Glauco 1997 -------------------------------------------------- (3)-Glauco 2047 -------------------------------- (3)-Glauco 2087 --- (3)-Glauco 2093 -- (3)-Glauco 2114 ||| (3)-Glauco 2130 ---- (3)-Glauco 2136 ------ (3)-Glauco 2142 - (3)-Glauco 2153 ------ (3)-Glauco 2187 -- (3)-Glauco 2218 - (3)-Glauco 2237 - (3)-Glauco 2253 --- (3)-Glauco 2264 -------------------- (3)-Glauco 2285 ---- (3)-Glauco 2293 - (3)-Glauco 2328 - (3)-Glauco 2363 -- (3)-Glauco 2397 ------ (3)-Glauco 2420 - (3)-Glauco 2443 - (3)-Glauco 2448 ------------------- (3)-Glauco 2527 --- (3)-Glauco 2561 - (3)-Glauco 2577 - (3)-Glauco 2582 - (3)-Glauco 2657 - (3)-Glauco 2716 | Cya.par.cy 0 |~~~~~~~~~~UACCAUGGAGAG-UU(U-GA)UCCU|GGCUCAGGAUGAA Cya.par.cy 50 CGC-UGGCGGUAUGCUU--AACACAUGCAAGUCGAACG|AAG-------- Cya.par.cy 100 --------auc(gc------------------aa------)gau------ Cya.par.cy 150 ----------------CUU-AGU--GGCGGACGGGUGAGUAA-CGCGUGA Cya.par.cy 200 GA-AUCUAC-CCUU------------------------------------ Cya.par.cy 250 -------------------------------------------------A Cya.par.cy 300 GGA---------GGGGGACAACAG------------------------UU Cya.par.cy 350 G(GAAA)CGA-CUGCUAAUACC-CCAU-AU-------------------- Cya.par.cy 400 ------------------gcca------(uucg---)------uggu--- Cya.par.cy 450 ---GAAA-----------------------AGA-------------(--- Cya.par.cy 500 -------guaa------)---------|----UCUGCCUGAGGA-AGA|G Cya.par.cy 550 -CUCGCGU|-CUGAUUA-GCUAGUUGG-UG-GG(G-UAAAGG)-CCUACC Cya.par.cy 600 AA|GGCGACGAU|CAGUAGCUG|GUCU(GAGA)GGAUGAUCAGC|CACAC Cya.par.cy 650 UGGGA(CUGAGAUACG)GCCCAGA-C--UCC(UA-CG)GG-A--GGCAG- Cya.par.cy 700 CAGUGGGG-AAUUUUCCG-CAAU-GGGC-(-GAAA)-GCCU-GACGGA|G Cya.par.cy 750 CAAUACCGCGUGAGGGAAGACGGCC(---UGUG--)GG-UU--GUAAACC Cya.par.cy 800 UC|UUUU-CUUAGGGAAGAAUca-------(--------)---------A Cya.par.cy 850 UGACG|GU-ACCU-AAGGAA-UAAGCAUC|GGCU-AACU-CCGUG(CCA- Cya.par.cy 900 -GCAGCC|GCGGU---AA-)UACGGAG|GAUGCAAGCGUUAU-CCGGAAU Cya.par.cy 950 CAUUGGGC|GUAAAGAGUUCGUAGGUG|GCUAAGCAAG-|UCU-GUUGUU Cya.par.cy 1000 AAAGGCUGGGGC(------------------------------------- Cya.par.cy 1050 ---------------------------------UUA)ACCCCAA-AA-AG Cya.par.cy 1100 GCAAU--GGA-AAC-U|GUU-UG-G-CUUGAG-UA|CGGUA-----GGGG Cya.par.cy 1150 CAGAG|GGAAUUCCUGG-UGUAGCG(GUGAAA)UGCGUAGAUA---UCAG Cya.par.cy 1200 GAAGAACACCGAU---GGC(GAAA)GC|A|CUCUG-CUG|GGCCG--U-- Cya.par.cy 1250 -------------------------------------------------- Cya.par.cy 1300 ----------UACUGACACU|GAG-GAACGAAAGCUAGGGUAGCAAAUGG Cya.par.cy 1350 G(AUU-A-GAUAC)-CCCAGUAG-|UC-CUA-GCCGUAAACUAUGGAU-- Cya.par.cy 1400 --AC|UA|GGUG-UUGUGCG------------------(-------uauc Cya.par.cy 1450 gacc-)-------------------------------------------- Cya.par.cy 1500 |------------------------------|-CGUACAGUACC-GUAGC Cya.par.cy 1550 (UAAC)GCGU-UAAGUAUCC|C|GCCUGGGGAGUACGCUC(GCAA)GAGU Cya.par.cy 1600 GAAACUCAAAGGAAUUGACGGGGGCCC-GCACA-------AGCGGU|GGA Cya.par.cy 1650 GUAUGUGGUUUAAUUCG-(AUGCAACG)CGAAGAACCUUACCAGGGUUUG Cya.par.cy 1700 ACA----UG|-UC-GCG--AA------UUUUCUU-----(GAA-A-)GAG Cya.par.cy 1750 AA-AAG---UG--CC---------(UUCG------)---------GGAA- Cya.par.cy 1800 ---------------|CGCGAACA|C|AGGUGGUGCAUG|GCU|GUCGUC Cya.par.cy 1850 A|-G-CUCGU|GUC(GUGA)GAUGUUGGG(UUAAGU)CCCGCAACGAGCG Cya.par.cy 1900 CAACCCUCG|UUUUUA-G-UUGCC-auca--------------------- Cya.par.cy 1950 -------------------------------------------------- Cya.par.cy 2000 -------------------------------------------------- Cya.par.cy 2050 -----------------------------(--uucagu--)-------ug Cya.par.cy 2100 |GGCACUCUAAAGAGACUGCCGGU(GACAA----)--------------- Cya.par.cy 2150 ---------GCCGGAGGAAGGUGGGGAUGACGUC-AA--GUCAGCAUGCC Cya.par.cy 2200 CCUUAUACCCUGGGCUAC-ACACGUACUACAAUGGU--CGGGACAAUAGG Cya.par.cy 2250 UU----GCCAACUU--------------------(----GCGA-)----- Cya.par.cy 2300 --------------AAGU-GAGCUAAUC-CG-UUAAACCCGGCCUCAGUU Cya.par.cy 2350 CAGAUUGCAGGC(--UGCAACUC)GCCUGCAUGAAGGUGGAAUCGCU--- Cya.par.cy 2400 ---AGUAAU-CGCCGG(UC--AGCUAU)ACGGCGGUGAAUUC--GUU--- Cya.par.cy 2450 -----------------CCCGGGCCUUGUACACACCGCCCGUCACACCAC Cya.par.cy 2500 GGGAGUCGG-CCAUGCCCGAAGUCGUU---ACCCU-AACC-(---a-uuu Cya.par.cy 2550 c------)-GG-AGG-GGG-AU-GCCU-AAGG-CAGGGCUGGUGACUGGG Cya.par.cy 2600 GUGAAGUCGUAACAAGGUAGCCGUACU(GGAA)GGUGCGGCUGGAUCACC Cya.par.cy 2650 UCCUUU--|~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ Cya.par.cy 2700 ~~~~~~~~~~~~~~~~| chl.C.para 0 |---------GUGCUGCAGAGAG-UU(U-GA)UCCU|GGCUCAGGAUGAA chl.C.para 50 CGC-UGGCGGUAUGCUU--AACACAUGCAAGUCGAACG|AAG-------- chl.C.para 100 --------auc(gc------------------aa------)gau------ chl.C.para 150 ----------------CUU-AGU--GGCGGACGGGUGAGUAA-CGCGUGA chl.C.para 200 GA-AUCUAC-CCUU------------------------------------ chl.C.para 250 -------------------------------------------------A chl.C.para 300 GGA---------GGGGGACAACAG------------------------UU chl.C.para 350 G(GAAA)CGA-CUGCUAAUACC-CCAU-AU-------------------- chl.C.para 400 ------------------GCCauuuaa-(GUAAaa-)uuaaauuGGU--- chl.C.para 450 ---GAAA-----------------------AGA-------------(--- chl.C.para 500 -------guaa------)---------|----UCUGCCUGAGGA-ANA|G chl.C.para 550 -CUCGCGU|-CUGAUUA-GCUAGUUGG-UG-GG(G-UAAAGG)-CCUACC chl.C.para 600 AA|GGCGACGAU|CAGUAGCUG|GUCU(GAGA)GGAUGAUCAGC|CACAC chl.C.para 650 UGGGA(CUGAGAUACG)GCCCAGA-C--UCC(UA-CG)GG-A--GGCAG- chl.C.para 700 CAGUGGGG-AAUUUUCCG-CAAU-GGGC-(-GAAA)-G-CU-GACGGA|G chl.C.para 750 CAAUACCGCGUGAGGGAAGAAGGCC(---UGUG--)GG-UU--GUAAACC chl.C.para 800 UC|UUUU-CUUAGGGAAGAAU---------(---Aaa--)---------- chl.C.para 850 UGAcG|GU-ACCU-AAGGAA-UAAGCAUC|GGCU-AACU-CCGUG(CCA- chl.C.para 900 -GCAGCC|GCGGU---AA-)UACGGAG|GAUGCAAGCGUUAU-CCGGAAU chl.C.para 950 CAUUGGGC|GUAAAGAGUUCGUAGGUG|GCUAAGCAAG-|UCU-GUUGUU chl.C.para 1000 AAAGGCUGGGGC(------------------------------------- chl.C.para 1050 ---------------------------------UUA)ACCCCAA-AA-AG chl.C.para 1100 GCAAU--GGA-AAC-U|GUU-UG-G-CUCGAG-UA|CGGUA-----GGGG chl.C.para 1150 CAGAG|GGAAUUCCUGG-UGUAGCG(GUGAAA)UGCGUAGAUA---UCAG chl.C.para 1200 GAAGAACACCGAU---GGC(GAAA)GC|A|CUCUG-CUG|GGCCG--U-- chl.C.para 1250 -------------------------------------------------- chl.C.para 1300 ----------AACUGACACU|GAG-GAACGAAAGCUAGGGUAGCAAAUGG chl.C.para 1350 G(AUU-A-GAUAC)-CCCAGUAG-|UC-CUA-GCCGUAAACUAUGGAU-- chl.C.para 1400 --AC|UA|GGUG-UUGUGCG------------------(-------uauc chl.C.para 1450 gacc-)-------------------------------------------- chl.C.para 1500 |------------------------------|-CGUACAGUACC-GUAGC chl.C.para 1550 (UAAC)GCGU-UAAGUAUCC|C|GCCUGGGGAGUACGCUC(GCAA)GAGU chl.C.para 1600 GAAACUCAAAGGAAUUGACGGGGGCCC-GCACA-------AGCGGU|GGA chl.C.para 1650 GUAUGUGGUUUAAUUCG-(AUGCAACG)CGAAGAACCUUACCAGGGUUUG chl.C.para 1700 ACA----UG|-UC-GCG--AA------UUUUCUU-----(GAA-A-)GAG chl.C.para 1750 AA-AAG---UG--C----------(uucg------)---------GGAA- chl.C.para 1800 ---------------|CGCGAACA|C|AGGUGGUGCAUG|GCU|GUCGUC chl.C.para 1850 A|-G-CUCGU|GUC(GUGA)GAUGUUGGG(UUAAGU)CCCGCAACGAGCG chl.C.para 1900 CAACCCUCG|UUUUUA-G-UUGCC-agca--------------------- chl.C.para 1950 -------------------------------------------------- chl.C.para 2000 -------------------------------------------------- chl.C.para 2050 -----------------------------(--uuaagu--)-------ug chl.C.para 2100 |GGCACUCUAAAGAGACUGCCGGU(GACAA----)--------------- chl.C.para 2150 ---------GCCGGAGGAAGGUGGGGAUGACGUC-AA--GUCAGCAUGCC chl.C.para 2200 CCUUAUACCCUGGGCUAC-ACACGUACUACAAUGGU--CGGGACAAUAGG chl.C.para 2250 UU----GCCAACUU--------------------(----GCGA-)----- chl.C.para 2300 --------------AAGU-GAGCUAAUC-C-NUUAAACCCGGCCUCAGUU chl.C.para 2350 CAGAUUGCAGGC(--UGCAACUC)GCCUGCAUGAAGGUGGAAUCGCU--- chl.C.para 2400 ---AGUAAU-CGCCGG(UC--AGCUAU)ACGGCGGUGAAUCC--GUU--- chl.C.para 2450 -----------------CCCGGGCCUUGUACACACCGCCCGUCACACCAC chl.C.para 2500 GGGAGUCGG-CCAUGCC-GAAGUCGUU---ACCCU-AACC-(---a-uuu chl.C.para 2550 c------)-GG-AGG-GGG-AU-GCCU-AAGG-CAGGGCUGGUGACUGGG chl.C.para 2600 GUGAAGUCGUAACAAGGUAGCCGUACU(GGAA)GGUGUGGCUGGAUCACC chl.C.para 2650 UCCUUG--|~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ chl.C.para 2700 ~~~~~~~~~~~~~~~~| chl.G.nost 0 |---------GUGCUGCAGAGAG-UU(U-GA)UCCU|GGCUCAGGAUGAA chl.G.nost 50 CGC-UGGCGGUAUGCUU--AACACAUGCAAGUCGAACG|GAG-------- chl.G.nost 100 --------auc(ga------------------aa------)gau------ chl.G.nost 150 ----------------CUU-AGU--GGCGGACGGGUGAGUAA-CGCGUGA chl.G.nost 200 GA-ANCUGC-CUCU------------------------------------ chl.G.nost 250 -------------------------------------------------A chl.G.nost 300 GGA---------GGGGGACAACAGgaagagaacaauaggacucuuuucGC chl.G.nost 350 C(GAAA)GGU-CUGCUAAUACC-CCAU-AU-------------------- chl.G.nost 400 ------------------GCC-------(GUAA---)-------GGU--- chl.G.nost 450 ---GAAA-----------------------GGAUU-----------(--- chl.G.nost 500 -------ucu-------)---------|--AAUCUGCCUGGAGA-AGA|G chl.G.nost 550 -CUCGCGU|-CUGAUUA-GCUAGUUGG-UA-AG(G-UAACGG)-CUUACC chl.G.nost 600 AA|GGCGACGAU|CAGUAGCUG|GUCU(GAGA)GGAUGACCAGC|CACAC chl.G.nost 650 UGGGA(CUGAGAUACG)GCCCAGA-C--UCC(UA-CG)GG-A--GGCAG- chl.G.nost 700 CAGUGGGG-AAUUUUCCG-CAAU-GGGC-(-GAAA)-G-CU-GACGGA|G chl.G.nost 750 CAAUACCGCGUGAGGGAAGAAGGCC(---UGUG--)GG-UU--GUAAACC chl.G.nost 800 UC|UUUU-CUCAGGGAAGAAG---------(---Aua--)---------- chl.G.nost 850 UGACG|GU-ACCU-GAGGAA-UAAGCAUC|GGCU-AACU-CCGUG(CCA- chl.G.nost 900 -GCAGCC|GCGGU---AA-)UACGGAG|GAUGCAAGCGUUAU-CCGGAAU chl.G.nost 950 UAUUGGGC|GUAAAGAGUUCGUAGGUG|GUUUAAUAAG-|UCU-GUUGUU chl.G.nost 1000 AAAGAUUGGGGC(------------------------------------- chl.G.nost 1050 ---------------------------------UUA)ACCCCAA-AC-AG chl.G.nost 1100 GCAAU--GGA-AAC-U|GUU-AG-G-CUUGAG-UA|CGGUA-----GGGG chl.G.nost 1150 UAGAG|GGAAUUCCCGG-UGUAGCG(GUGAAA)UGCGUAGAUA---UCGG chl.G.nost 1200 GAAGAACACCAAU---GGC(GAAA)GC|A|CUCUG-CUG|GGCCG--U-- chl.G.nost 1250 -------------------------------------------------- chl.G.nost 1300 ----------UACUGACACU|GAG-GAACGAAAGCUAGGGGAGCAAAUGG chl.G.nost 1350 G(AUU-A-GAUAC)-CCCAGUAG-|UC-CUA-GCUGUAAACGAUGGAU-- chl.G.nost 1400 --AC|UA|GGUG-UUGUACG------------------(-------uauc chl.G.nost 1450 gacc-)-------------------------------------------- chl.G.nost 1500 |------------------------------|-CGUACAGUACU-GUACG chl.G.nost 1550 (UAAC)GCGU-UAAGUAUCC|C|GCCUGGGGAGUACGCUC(GCAA)GAGU chl.G.nost 1600 GAAACUCAAAGGAAUUGACGGGGGCCC-GCACA-------AGCGGU|GGA chl.G.nost 1650 GCAUGUGGUUUAAUUCG-(AUGCAACG)CGAAGAACCUUACCAGGAUUUG chl.G.nost 1700 ACA----UG|-UC-GCG--AA------UUUUCUU-----(GAA-A-)AAG chl.G.nost 1750 AA-AAG---UG--CC---------(uucg------)---------GGAG- chl.G.nost 1800 ---------------|CGCGAACA|C|AGGUGGUGCAUG|GCU|GUCGUC chl.G.nost 1850 A|-G-CUCGU|GUC(GUGA)GAUGUUGGG(UUAAGU)CCCGCAACGAGCG chl.G.nost 1900 CAACCCUUG|UUUUUA-G-UUGCC-agca--------------------- chl.G.nost 1950 -------------------------------------------------- chl.G.nost 2000 -------------------------------------------------- chl.G.nost 2050 -----------------------------(--uucagu--)-------ug chl.G.nost 2100 |GGUACUCUAAAGAAACUGCCGGU(GACAA----)--------------- chl.G.nost 2150 ---------GCCGGAGGAAGGGAGGGAUGACGUC-AA--GUCAGCAUGCC chl.G.nost 2200 CCUUAUAUCCUGGGCUAC-ACACGUGCUACAAUGGC--CGGGACAAAAGG chl.G.nost 2250 UC----GCGAACUU--------------------(----GUGA-)----- chl.G.nost 2300 --------------AAGU-AAGCCAAUC-CUAU-AAACCCGGUCUCAGUU chl.G.nost 2350 CGGAUUGCAGGC(--UGCAACUC)GCCUGCAUGAAGGUGGAAUCGCU--- chl.G.nost 2400 ---AGUAAU-CGCCGG(UC--AGCUAU)ACGGCGGUGAAUCC--GUU--- chl.G.nost 2450 -----------------CCCGGGCCUUGUACACACCGCCCGUCACACCAU chl.G.nost 2500 GGGAGUUGG-CCACGCC-GAAGUCGUU---ACCCU-AACU-(---u-uuu chl.G.nost 2550 u------)-AG-AGG-GGG-AC-GCCG-nnnn-nnGGGCUGGUGACUGGG chl.G.nost 2600 GUGAAGUCGUAACAAGGUAGCCGUACU(GGAA)GGUGUGGUUGGAUCACC chl.G.nost 2650 UCCUUG--|GAUCCGUG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ chl.G.nost 2700 ~~~~~~~~~~~~~~~~| chl.G.vacu 0 |---------GUGCUGCAGAGAG-UU(UCGA)UCCU|GGCUCAGGAUGAA chl.G.vacu 50 CGC-UGGCGGUAUGCUU--AACACAUGCAAGUCGUACG|GAA-------- chl.G.vacu 100 --------guu(gu------------------caa-----)aac------ chl.G.vacu 150 ----------------UUU-AGU--GGCGGACGGGUGAGAAC-AACAUAA chl.G.vacu 200 GA-AUCUGC-UUUU------------------------------------ chl.G.vacu 250 -------------------------------------------------A chl.G.vacu 300 GGA---------AGAGGAUAACAA------------------------UC chl.G.vacu 350 G(GAAA)CGA-UUGCUAAUACU-CUAU-GU-------------------- chl.G.vacu 400 ------------------GCU-------(GUAA---)-------AGU--- chl.G.vacu 450 ---GAAA-----------------------GGA-------------(--- chl.G.vacu 500 -----g-caa-------)---------|----UCCGCCUGAAAU-AGA|G chl.G.vacu 550 -CUUGUGU|CCUGAUUA-GCUAGUUGG-UA-GG(G-UAAGAG)-CCUACC chl.G.vacu 600 AA|GGCGACGAU|CAGUAGCUG|GUCU(GAGA)GGACGAUCAGC|CACAC chl.G.vacu 650 UGGGA(CUGAGACACG)GCCCAGA-C--UCC(UA-CG)GG-A--GGCAG- chl.G.vacu 700 CAGUGGGG-AAUUUUCCG-CAAU-GGGC-(-GAAA)-GCCU-GACGGA|G chl.G.vacu 750 CAAUACCGCGUGAGGGAAGAAGGUC(---UCUG--)GA-UU--GUAAACC chl.G.vacu 800 UC|UUUU-GUUGGGAAAGAA----------(---UUU--)---------- chl.G.vacu 850 UGAcG|GU-ACCC-AACGAA-UAAGCAUC|GGCU-AACU-CCGUG(CCA- chl.G.vacu 900 -GCAGCC|GCGGU---AA-)UACGGAG|GAUGCAAGCGUUAU-CCGGAAU chl.G.vacu 950 CAUUGGGC|GUAAAGCGUCUGUAGGUG|GUUUUUUAAG-|UCU-AUUGUU chl.G.vacu 1000 AAAUAUUAAGGC(------------------------------------- chl.G.vacu 1050 ---------------------------------UUA)ACCUUGA-UU-CA chl.G.vacu 1100 GCAUU--GGA-AAC-U|GUU-AA-A-CUAGAG-UA|UGGUA-----AAGG chl.G.vacu 1150 UAGAA|GGAAUUUCCAG-UGUAGCG(GUGAAA)UGCGUAGAUA---UUGG chl.G.vacu 1200 GAAGAACACCAGU---GGC(GAAA)GC|G|UUCUA-CUA|GACCA--U-- chl.G.vacu 1250 -------------------------------------------------- chl.G.vacu 1300 ----------AACUGACACU|GAG-AGACGAAAGCUAAGGUAGCAAAUGG chl.G.vacu 1350 G(AUU-A-GAUAC)-CCCAGUAG-|UC-UUA-GCCGUAAACGAUGGAU-- chl.G.vacu 1400 --AC|UA|GAUG-UUGUGCA------------------(-------cuau chl.G.vacu 1450 uaagu)-------------------------------------------- chl.G.vacu 1500 |------------------------------|-UGUAUAGUAUC-GUAGC chl.G.vacu 1550 (UAAC)GCGU-UAAGUAUCC|C|GCCUGGGAAGUAUGCUC(GCAA)GAGU chl.G.vacu 1600 GAAACUCAAAGGAAUUGACGGGGGCCC-GCACA-------AGCGGU|GGA chl.G.vacu 1650 GCAUGUGGUUUAAUUCG-(AUGCAACG)CGAAGAACCUUACCAAAAUUUG chl.G.vacu 1700 ACA----UA|-UC-GUG--AAU----UUUUAGUU-----(GAA-A-)GAU chl.G.vacu 1750 GA-GAAg--UG--CC---------(uuag------)---------GGAA- chl.G.vacu 1800 ---------------|CACGAAUA|C|AGGUGGUGCAUG|GCU|GUCGUC chl.G.vacu 1850 A|-G-CUCGU|GUC(GUGA)GAUGUUGGG(UUAAGU)CCCGCAACGAGCG chl.G.vacu 1900 UAACCCUUG|UCUUUA-G-UUGCC-auca--------------------- chl.G.vacu 1950 -------------------------------------------------- chl.G.vacu 2000 -------------------------------------------------- chl.G.vacu 2050 -----------------------------(--uuuagu--)-------ug chl.G.vacu 2100 |GGAACUCUAAAGAGACUGCUGGU(GACAA----)--------------- chl.G.vacu 2150 ---------ACCGGAGGAAGGUAAGGAUGACGUC-AA--GUCAGCAUGCC chl.G.vacu 2200 CCUUACAUUUUGGGCUAC-ACACGUGCUACAAUGGU--UGGGACAAAGAG chl.G.vacu 2250 CU----GCAAACCU--------------------(----GCGA-)----- chl.G.vacu 2300 --------------AGGU-UAGCGAAUC-UCGU-AAACCUAGCCUAAGUU chl.G.vacu 2350 CAGAUCGUAGGC(--UGCAACUC)GCCUACGUGAAGAUGGAAUCGCU--- chl.G.vacu 2400 ---AGUAAU-CGCCGA(UC--AGCUAU)ACGGCGGUGAAUCC--GUU--- chl.G.vacu 2450 -----------------CCCGGGCCUUGUACACACCGCCCGUCACACNAU chl.G.vacu 2500 GGAAGUCAA-CUACGCCCAAAGGUUAU---UUUCUUAACC-(-----gua chl.G.vacu 2550 a------)--G-AGA-GAG-GU-ACCU-AAGG-CAGAGUUGGUAACUAGG chl.G.vacu 2600 GUGAAGUCGUAACAAGGUAGCCGUACU(GGAA)GGUGUGGCUGGAUCACC chl.G.vacu 2650 UCCUUG--|GAUCCGUG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ chl.G.vacu 2700 ~~~~~~~~~~~~~~~~| chl.G.witt 0 |---------GUGCUGCAGAGAG-UU(U-GA)UCCU|GGCUCAGGAUGAA chl.G.witt 50 CGC-UGGCGGUAUGCUU--AACACAUGCAAGUCGAACG|AAA-------- chl.G.witt 100 --------auu(ga------------------aa------)aau------ chl.G.witt 150 ----------------UUU-AGU--GGCGAACGGGUGAGUAA-CGCGUGA chl.G.witt 200 GA-AUCUGC-CUCA------------------------------------ chl.G.witt 250 -------------------------------------------------A chl.G.witt 300 GGA---------GGAGGAUAACAGuaggaaugcaaguuccuugu----GU chl.G.witt 350 C(GAAA)GAU-CUGCUAAUACU-CCGU-AU-------------------- chl.G.witt 400 ------------------GCC-------(GAAA---)-------GGU--- chl.G.witt 450 ---GAAA-----------------------GGAUUG-A--------(--- chl.G.witt 500 -------uuu-------)------uc-|--AAUCUGCCUAGAGA-AGA|G chl.G.witt 550 -CUCGCGU|-CUGAUUA-GCUAGUUGG-UA-AG(G-UAAUGG)-CUUACC chl.G.witt 600 AA|GGCGAUGAU|CAGUAGCUG|GUCU(GAGA)GGAUGAUCAGC|CACAC chl.G.witt 650 UGGGA(CUGAGAUACG)GCCCAGA-C--UCC(UA-CG)GG-A--GGCAG- chl.G.witt 700 CAGUGGGG-AAUUUUCCG-CAAU-GGGC-(-GAAA)-G-CU-GACGGA|G chl.G.witt 750 CAAUACCGCGUGAGGGAUGAAGGCC(---UUUG--)GG-UU--GUAAACC chl.G.witt 800 UC|UUUU-CUCAAGGAAGAAA---------(---Uaa-a)---------- chl.G.witt 850 UGACG|GU-ACUU-GAGGAA-UAAGCAUC|GGCU-AACU-CCGUG(CCA- chl.G.witt 900 -GCAGCC|GCGGU---AA-)UACGGGG|GAUGCAAGCGUUAU-CCGGAAU chl.G.witt 950 UAUUGGGC|GUAAAGGGUUCGUAGGUG|GUUUAACAAG-|UCU-GUUGUU chl.G.witt 1000 AAAGGCUAGGGC(------------------------------------- chl.G.witt 1050 ---------------------------------UUA)ACCUUAG-AA-AA chl.G.witt 1100 GCAAU--GGA-AAC-U|GUU-AG-A-CUAGAG-UA|UGGUA-----GGGG chl.G.witt 1150 CAAAG|GGAAUUCUCAG-UGUAGCG(GUGAAA)UGCGUAGAUA---UUGG chl.G.witt 1200 GAAGAACACCAAA---AGC(GAAA)GC|A|CUUUG-CUG|GGCCA--U-- chl.G.witt 1250 -------------------------------------------------- chl.G.witt 1300 ----------AACUGACACU|GAG-GAACGAAAGCUAGGGGAGCAAAUGG chl.G.witt 1350 G(AUU-A-GAUAC)-CCCAGUAG-|UC-CUA-GCCGUAAACGAUGGAU-- chl.G.witt 1400 --AC|UA|GGUG-UUGUACG------------------(-------uauu chl.G.witt 1450 gacc-)-------------------------------------------- chl.G.witt 1500 |------------------------------|-CGUACAGUACU-GUAGC chl.G.witt 1550 (UAAC)GCGU-UAAGUAUCC|C|GCCUGGGAAGUACGCUC(GCAA)GAGU chl.G.witt 1600 GAAACUCAAAGGAAUUGACGGGGGCCC-GCACA-------AGCG-U|GGA chl.G.witt 1650 GCAUGUGGUUUAAUUCG-(AUGCAACG)CGAAGAACCUUACCAGGGUUUG chl.G.witt 1700 ACA----UG|-UC-GCG--AA------UUUUCUU-----(GAA-A-)AAG chl.G.witt 1750 AA-AAG---UG--CC---------(uucg------)---------GGAG- chl.G.witt 1800 ---------------|CGCGAACA|C|AGGUGGUGCAUG|GCU|GUCGUC chl.G.witt 1850 A|-G-CUCGU|GUC(GUGA)GAUGUUGGG(UUAAGU)CCCGCAACGAGCG chl.G.witt 1900 CAACCCUUG|UUUUUA-G-UUGCC-auca--------------------- chl.G.witt 1950 -------------------------------------------------- chl.G.witt 2000 -------------------------------------------------- chl.G.witt 2050 -----------------------------(--uuaagu--)-------ug chl.G.witt 2100 |GGCACUCUAAAGAGACUGCCGGU(GAUAA----)--------------- chl.G.witt 2150 ---------GCCGGAGGAAGGUAAGGAUGACGUC-AA--GUCAGCAUGCC chl.G.witt 2200 CCUUAUAUCCUGGGCUAC-ACACGUGCUACAAUGGU--UAAGACAAUAGG chl.G.witt 2250 UU----GCAAGCUU--------------------(----GUAA-)----- chl.G.witt 2300 --------------AAGU-AAGCUAAUC-CUUU-AAACUUAAUCUCAGUU chl.G.witt 2350 CAGAUUGUAGGC(--UGCAACUC)GCCUACAUGAAGGUGGAAUCGCU--- chl.G.witt 2400 ---AGUAAU-CGCCGG(UC--AGCUAU)ACGGCGGUGAAUUC--GUU--- chl.G.witt 2450 -----------------CCCGGGCCUUGUACACACCGCCCGUCACACCAU chl.G.witt 2500 GGGAGUCGG-CCAUGCCC-AAGUCGUU---ACCUU-AACC-(---u-auu chl.G.witt 2550 u------)-GG-AGG-GGG-AU-GCCG-AAnn-nnnnnUCGGUGACUGGG chl.G.witt 2600 GUGAAGUCGUAACAAGGUAGCCGUACU(GGAA)GGUGUGGUUGGAUCACC chl.G.witt 2650 UCCUUG--|~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ chl.G.witt 2700 ~~~~~~~~~~~~~~~~| (3)-Haptop 0 | (3)-Haptop 23 - (3)-Haptop 85 -- (3)-Haptop 88 - (3)-Haptop 103 --------------------------------------------- (3)-Haptop 148 - (3)-Haptop 156 --------- (3)-Haptop 173 -- (3)-Haptop 178 ------------------- (3)-Haptop 297 -- (3)-Haptop 303 --------- (3)-Haptop 316 -------- (3)-Haptop 324 --------- (3)-Haptop 345 --- (3)-Haptop 354 -- (3)-Haptop 360 - (3)-Haptop 371 - (3)-Haptop 375 - (3)-Haptop 378 - (3)-Haptop 380 --------------------------- (3)-Haptop 412 - (3)-Haptop 422 ---- (3)-Haptop 426 -- (3)-Haptop 438 ------ (3)-Haptop 462 ------------------ (3)-Haptop 491 - (3)-Haptop 494 - (3)-Haptop 499 - (3)-Haptop 507 -- (3)-Haptop 538 - (3)-Haptop 544 - (3)-Haptop 550 - (3)-Haptop 569 -- (3)-Haptop 581 - (3)-Haptop 585 - (3)-Haptop 606 ----- (3)-Haptop 612 - (3)-Haptop 618 | (3)-Haptop 633 | (3)-Haptop 639 | (3)-Haptop 643 -- (3)-Haptop 666 - (3)-Haptop 677 - (3)-Haptop 680 | (3)-Haptop 684 - (3)-Haptop 690 - (3)-Haptop 692 -- (3)-Haptop 698 --- (3)-Haptop 715 - (3)-Haptop 718 - (3)-Haptop 730 - (3)-Haptop 734 -------------------------------------- (3)-Haptop 772 ---------------------- (3)-Haptop 805 ------- (3)-Haptop 822 - (3)-Haptop 828 - (3)-Haptop 830 | (3)-Haptop 833 ----- (3)-Haptop 841 ------------- (3)-Haptop 854 -- (3)-Haptop 866 - (3)-Haptop 889 - (3)-Haptop 899 --- (3)-Haptop 907 - (3)-Haptop 913 --- (3)-Haptop 918 -| (3)-Haptop 926 | (3)-Haptop 931 - (3)-Haptop 942 - (3)-Haptop 958 | (3)-Haptop 988 - (3)-Haptop 990 | (3)-Haptop 993 - (3)-Haptop 1074 --------- (3)-Haptop 1086 - (3)-Haptop 1089 - (3)-Haptop 1097 - (3)-Haptop 1099 | (3)-Haptop 1105 --- (3)-Haptop 1116 - (3)-Haptop 1120 - (3)-Haptop 1123 - (3)-Haptop 1125 ---- (3)-Haptop 1131 |- (3)-Haptop 1142 ---- (3)-Haptop 1164 - (3)-Haptop 1165 ------ (3)-Haptop 1177 - (3)-Haptop 1183 -------------------------------------|----- (3)-Haptop 1226 -------------- (3)-Haptop 1243 - (3)-Haptop 1245 -- (3)-Haptop 1299 ----------- (3)-Haptop 1314 - (3)-Haptop 1320 - (3)-Haptop 1325 | (3)-Haptop 1355 - (3)-Haptop 1361 ------- (3)-Haptop 1371 | (3)-Haptop 1373 -- (3)-Haptop 1383 - (3)-Haptop 1387 - (3)-Haptop 1398 ---- (3)-Haptop 1404 - (3)-Haptop 1412 - (3)-Haptop 1415 - (3)-Haptop 1421 - (3)-Haptop 1427 --------------------- (3)-Haptop 1452 --- (3)-Haptop 1464 -- (3)-Haptop 1467 -- (3)-Haptop 1474 ---- (3)-Haptop 1479 -- (3)-Haptop 1483 -- (3)-Haptop 1487 ------------ (3)-Haptop 1499 --------------------------------- (3)-Haptop 1536 ------------ (3)-Haptop 1560 - (3)-Haptop 1565 | (3)-Haptop 1572 | (3)-Haptop 1575 - (3)-Haptop 1595 - (3)-Haptop 1626 - (3)-Haptop 1646 - (3)-Haptop 1675 ------ (3)-Haptop 1682 ------- (3)-Haptop 1704 --- (3)-Haptop 1709 | (3)-Haptop 1713 - (3)-Haptop 1721 ------ (3)-Haptop 1736 --- (3)-Haptop 1743 - (3)-Haptop 1752 - (3)-Haptop 1767 ------- (3)-Haptop 1777 --------- (3)-Haptop 1787 --- (3)-Haptop 1790 ----- (3)-Haptop 1802 ------------- (3)-Haptop 1821 -- (3)-Haptop 1824 | (3)-Haptop 1832 --- (3)-Haptop 1842 ---------- (3)-Haptop 1865 -- (3)-Haptop 1868 -- (3)-Haptop 1871 -- (3)-Haptop 1883 ---------- (3)-Haptop 1893 ------ (3)-Haptop 1901 - (3)-Haptop 1916 - (3)-Haptop 1924 - (3)-Haptop 1937 - (3)-Haptop 1939 -- (3)-Haptop 1959 -------------------------------------- (3)-Haptop 1997 -------------------------------------------------- (3)-Haptop 2047 -------------------------------- (3)-Haptop 2087 --- (3)-Haptop 2093 -- (3)-Haptop 2114 ||| (3)-Haptop 2130 ---- (3)-Haptop 2136 ------ (3)-Haptop 2142 - (3)-Haptop 2153 ------ (3)-Haptop 2187 -- (3)-Haptop 2218 - (3)-Haptop 2237 - (3)-Haptop 2253 --- (3)-Haptop 2264 -------------------- (3)-Haptop 2285 ---- (3)-Haptop 2293 - (3)-Haptop 2328 - (3)-Haptop 2363 -- (3)-Haptop 2397 ------ (3)-Haptop 2420 - (3)-Haptop 2443 - (3)-Haptop 2448 ------------------- (3)-Haptop 2527 --- (3)-Haptop 2561 - (3)-Haptop 2577 - (3)-Haptop 2582 - (3)-Haptop 2657 - (3)-Haptop 2716 | chl.E.huxl 0 |-----------CAAGCUUAGAG-UU(U-GA)UCCU|GGCUCAGGAUGAA chl.E.huxl 50 CGC-UGGCGGUAUGCUU--AACACAUGCAAGUCGAACG|AGA-------- chl.E.huxl 100 --------guu(uu------------------u-------)aac------ chl.E.huxl 150 ----------------UCU-AGU--GGCGAACGGGUGAGUAA-UACGUGA chl.E.huxl 200 GA-AUCUGC-CCUU------------------------------------ chl.E.huxl 250 -------------------------------------------------A chl.E.huxl 300 GGA---------GAAGAAUAACUA------------------------CU chl.E.huxl 350 G(GAAA)CGG-UAGCUAAGUCU-UCAU-AU-------------------- chl.E.huxl 400 ------------------GCC-------(gaga---)-------GGU--- chl.E.huxl 450 ---GAAAU----------------------AGU-------------(--- chl.E.huxl 500 -------UUCA------)---------|----ACUGCCUAAGGA-UGA|G chl.E.huxl 550 -CUCACGC|-CUGAUUA-GCUUGUUGG-UG-AG(G-UAACGG)-CUUACC chl.E.huxl 600 AA|GGCCACGAU|CAGUAGCUG|GUUU(GAGA)GAACGAUCAGC|CACAC chl.E.huxl 650 UGGGA(CUGAGACACG)GCCCAGA-C--UCC(UC-CG)GG-A--GGCAG- chl.E.huxl 700 CAGUGAGG-AAUUUUCCG-CAAU-GGGC-(-GAAA)-G-CU-GACGGA|G chl.E.huxl 750 CAAUACCGCGUGAGGGAUGAAGGAU(---UUUG--)GU-CU--GUAAACC chl.E.huxl 800 UC|UUUU-CUCAAGAAAGAAG---------(---UUC--)---------- chl.E.huxl 850 UGACG|GU-ACUU-GAGGAA-UAAGCAUC|GGCU-AACU-CCGUG(CCA- chl.E.huxl 900 -GCAGCC|GCGGU---AA-)UACGGGG|GAUGCAAGCGUUAU-CCGGAAU chl.E.huxl 950 CAUUGGGC|GUAAAGCGCCUGUAGGUU|GUUUAGUAAG-|UCU-GUUGUU chl.E.huxl 1000 AAAGACCAGGGC(------------------------------------- chl.E.huxl 1050 ---------------------------------UUA)ACCCUGG-GA-AA chl.E.huxl 1100 GCAAU--GGA-AAC-U|ACU-AG-A-CUUGAG-UA|UGGCA-----GGGG chl.E.huxl 1150 UAGAG|GGAAUUUCUAG-UGUAGCG(GUGAAA)UGCGUAGAUA---UUAG chl.E.huxl 1200 AAAGAACACCGGC---GGC(GAAA)GC|G|CUCUA-CUG|GACCA--U-- chl.E.huxl 1250 -------------------------------------------------- chl.E.huxl 1300 ----------UACUGACACU|CAG-AGGCGAAAGCUAGGGGAGCAAAAGG chl.E.huxl 1350 G(AUU-A-GAUAC)-CCCUGUAG-|UC-CUA-GCCGUAAACGAUGGAU-- chl.E.huxl 1400 --AC|UA|GAUG-UUGCGC-------------------(--------aau chl.E.huxl 1450 uu---)-------------------------------------------- chl.E.huxl 1500 |------------------------------|--GUGCAGUAUC-UUAGC chl.E.huxl 1550 (UAAC)GCGU-UAAGUAUCC|C|GCCUGGGGAGUACGCUC(GCAA)GGGU chl.E.huxl 1600 GAAACUCAAAGGAAUUGACGGGGGCCC-GCACA-------AGCGGU|GGA chl.E.huxl 1650 GCAUGUGGUUUAAUUCG-(AUGCAACG)CGAAGAACCUUACCAGGGCUUG chl.E.huxl 1700 ACA----UA|-CU-ACA--AA------UCUUUUC-----(GAA-AC)GA- chl.E.huxl 1750 AA-GAG---UG--CC---------(UUCG------)---------GGAA- chl.E.huxl 1800 ---------------|UGUAGAUA|C|AGGUGGUGCAUG|GCU|GUCGUC chl.E.huxl 1850 A|-G-CUCGU|GUC(GUGA)GAUGUUGGG(UUAAGU)CCCGCAACGAGCG chl.E.huxl 1900 CAACCCUCA|UUUUUA-G-UUGCC-AAU---------------------- chl.E.huxl 1950 -------------------------------------------------- chl.E.huxl 2000 -------------------------------------------------- chl.E.huxl 2050 -----------------------------(--uuauu---)--------G chl.E.huxl 2100 |GGAUUUCUAGAGAGACUGCCGGU(GACAA----)--------------- chl.E.huxl 2150 ---------ACCGGAGGAAGGUGAGGAUGACGUC-AA--GUCAGCAUGCC chl.E.huxl 2200 CCUUAUGCCCUGGGCCAC-ACACGUGCUACAAUGGC--GAAGACAAAGAG chl.E.huxl 2250 UC----GCAAACCU--------------------(----GCGA-)----- chl.E.huxl 2300 --------------AGGC-UAGCUAAUC-UCGU-AAACUUCGUCUAAGUU chl.E.huxl 2350 CGGAUUGUAGGC(--UGCAACUC)GCCUGCAUGAAGUUGGAAUCGCU--- chl.E.huxl 2400 ---AGUAAU-CGCUGG(UC--AGCUAU)ACAGCGGUGAAUUC--GUU--- chl.E.huxl 2450 -----------------CCCGGGCCUUGUACACACCGCCCGUCACACCAU chl.E.huxl 2500 GGGAGCUGG-UCAUACCCAAUAUCGUU---aGCCU-AACC-(---a-uuc chl.E.huxl 2550 g------)-GG-AGG-GCG-GC-GCUU-AAGG-UAGGGCUAGUGACUGGG chl.E.huxl 2600 GUGAAGUCGUAACAAGGUAGCCGUACU(GGAA)GGUGCGGCUGGAUCACC chl.E.huxl 2650 UCCUUU--|~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ chl.E.huxl 2700 ~~~~~~~~~~~~~~~~| chl.Iso.sp 0 |---------UGCCUGCAGAGAG-UU(Y-GA)UCCU|GGCUCAGGAUGAA chl.Iso.sp 50 CGC-UGGCGGUAUGCUU--AACACAUGCAAGUCGAACG|AGA-------- chl.Iso.sp 100 --------guu(uu------------------u-------)aac------ chl.Iso.sp 150 ----------------UCU-AGU--GGCGAACGGGUGMGUAA-YACGUGA chl.Iso.sp 200 GA-AUCUGC-CCUU------------------------------------ chl.Iso.sp 250 -------------------------------------------------A chl.Iso.sp 300 GGA---------AAAGAAUAACUG------------------------CU chl.Iso.sp 350 G(GAAA)CGG-UAGCUAAGUCU-UUAU-AU-------------------- chl.Iso.sp 400 ------------------GCC-------(GAGA---)-------GGU--- chl.Iso.sp 450 ---GAAAU----------------------AGU-------------(--- chl.Iso.sp 500 -------ucau------)---------|----ACUGCCUAAGGA-UGA|G chl.Iso.sp 550 -CUCACGC|-CUGAUUA-GCUUGUUGG-UA-AG(G-UAAUGG)-CUUACC chl.Iso.sp 600 AA|GGCCACGAU|CAGUAGCUG|GUUU(GAGA)GAACGAMCAGC|CACAC chl.Iso.sp 650 UGGGA(CUGAGACACG)GCCCAGA-C--UCC(UC-CG)GG-A--GGCAG- chl.Iso.sp 700 CAGUGAGG-AAUUUUCCG-CAAU-GGGC-(-GAAA)-GCCU-GACGGA|G chl.Iso.sp 750 CAAUACCGCGUGAGGGAUGAAGUAU(---CUUG--)GU-AU--GUAAACC chl.Iso.sp 800 UC|UUUU-CUCAAGAAAGAAG---------(---UUc--)---------- chl.Iso.sp 850 UGAcG|GU-ACUU-GAGGAA-UAAGCAUC|GGCU-AACU-CCGUG(CCA- chl.Iso.sp 900 -GCAGCC|GCGGU---AA-)UACGGGG|GAUGCAAGCGUUAU-UCGGAAU chl.Iso.sp 950 UAUUGGGC|GUAAAGCGCCUGUAGGUU|GUUUAGUAAG-|UCC-GUUGUU chl.Iso.sp 1000 AAAUACUAGGGC(------------------------------------- chl.Iso.sp 1050 ---------------------------------UUA)ACCCUGG-GA-AA chl.Iso.sp 1100 GCAAU--AGA-AAC-U|ACU-AG-A-CUUGAG-UA|UGGCA-----GGGG chl.Iso.sp 1150 UAGAG|GGAAUUUCUAG-UGUAGCG(GUGAAA)UGCGUAGAUA---UUAG chl.Iso.sp 1200 AAAGAACACCGGC---GGC(GAAA)GC|G|CUCUA-CUG|GACCA--U-- chl.Iso.sp 1250 -------------------------------------------------- chl.Iso.sp 1300 ----------UACUGACACU|GAG-AGGCGAAAGCUAGGGUAGCAAAAGG chl.Iso.sp 1350 G(AUU-A-GAUAC)-CCCUGUAG-|UC-CUA-GCCGUAAACGGUGGAU-- chl.Iso.sp 1400 --AC|UA|GGUG-UUGUGC-------------------(--------aaa chl.Iso.sp 1450 uu---)-------------------------------------------- chl.Iso.sp 1500 |------------------------------|--GUACAGUAUC-UUAGC chl.Iso.sp 1550 (UAAC)GCGU-UAAGUAUCC|C|GCCUGGGGAGUACGCUC(GCAA)GGGU chl.Iso.sp 1600 GAAACUCAAAGGAAUUGACGGGGGCCC-GCACA-------AGCGGU|GGA chl.Iso.sp 1650 GCAUGUGGUUUAAUUCG-(AUGCAACG)CGAAGAACCUUACCAGGGCUUG chl.Iso.sp 1700 ACA----UA|-CU-GCA--GA------UCUUCUA-----(GAA-A-)CAG chl.Iso.sp 1750 AA-GAG---UA--CC---------(uucg------)---------GGAA- chl.Iso.sp 1800 ---------------|UGUAGAUA|C|AGGUGGUGCAUG|GCU|GUCGUC chl.Iso.sp 1850 A|-G-CUCGU|GUC(GUGA)GAUGUUGGG(UUAAGU)CCCGCAACGAGCG chl.Iso.sp 1900 CAACCCUCG|UUUUUA-G-UUGCC-------------------------- chl.Iso.sp 1950 -------------------------------------------------- chl.Iso.sp 2000 -------------------------------------------------- chl.Iso.sp 2050 -----------------------------(aauuuauug-)--------- chl.Iso.sp 2100 |GGUUUUCUAGAAAGACUGCCGGU(GACAA----)--------------- chl.Iso.sp 2150 ---------ACCGGAGGAAGGUGAGGAUGACGUC-AA--GUCAGCAUGCC chl.Iso.sp 2200 CCUUAUGUCCUGGGCCAC-ACACGUGCUACAAUGGC--GGAGACAAAGAG chl.Iso.sp 2250 UC----GCAAACCU--------------------(----GCGA-)----- chl.Iso.sp 2300 --------------AGGU-UAGCUAAUC-U-CAUAAACUUCGUCUAAGUU chl.Iso.sp 2350 CGGAUUGUAGGC(--UGCAACUC)GCCUGCAUGAAGUUGGAAUCGCU--- chl.Iso.sp 2400 ---AGUAAU-CGCUGG(UC--AGCUAU)ACAGCGGUGAAUUC--GUU--- chl.Iso.sp 2450 -----------------CCCGGGCCUUGUACACACCGCCCGUCACACCAU chl.Iso.sp 2500 GGGAGCUGG-UCAUACCCAAUAUCGUU---AGUCU-AACC-(-----auu chl.Iso.sp 2550 c------)-GG-GGG-ACG-GC-GCUU-AAGG-UAGGGCUAGUGACUGGG chl.Iso.sp 2600 GUGAAGUCGUAACAAGGUAGCCGUACU(GGAA)GGUGNGGNUGGAUCACC chl.Iso.sp 2650 UCCUUG--|~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ chl.Iso.sp 2700 ~~~~~~~~~~~~~~~~| pl.O.neapo 0 |-uuauuugaauaccauggaGAG-UU(U-GA)UCCU|GGCUCAGGAUGAA pl.O.neapo 50 CGC-UGGCGGUAUGCUU--AACACAUGCAAGUCGGACG|AG--------- pl.O.neapo 100 -------aguu(uu------------------u-------)aacu----- pl.O.neapo 150 ----------------YU--AGU--GGCGAACGGGUGCGUAA-UACGUGA pl.O.neapo 200 GA-AUCUGC-CCUU------------------------------------ pl.O.neapo 250 -------------------------------------------------A pl.O.neapo 300 GGA---------GGGGAAUAACUG------------------------UU pl.O.neapo 350 G(GAAA)CGR-CAGCUAAAUCC-CCAU-AU-------------------- pl.O.neapo 400 ------------------GCC-------(gaga---)-------GGU--- pl.O.neapo 450 ---GAAAA----------------------AGU-------------(--- pl.O.neapo 500 -------uuac------)---------|----ACUGCCUAAGGA-UGA|G pl.O.neapo 550 -CUCGCGC|-CUGAUUA-GCUUGUUGG-UA-AG(G-UAACGG)-CUUACC pl.O.neapo 600 AA|GGCCACGAU|CAGUAGCUG|GUUU(GAGA)GAAUGAUCAGC|CACAC pl.O.neapo 650 UGGGA(CUGAGACACG)GCCCAGA-C--UCC(UC-CG)GG-A--GGCAG- pl.O.neapo 700 CAGUGAGG-AAUUUUCCG-CAAU-GGGC-(-GAAA)-GCCU-GACGGA|G pl.O.neapo 750 CAAUACCGCGUGAGGGAUGAAGGAU(---UUUG--)GU-CU--GUAAACC pl.O.neapo 800 UC|UUUU-CUCAAGAAAGAAGU--------(--------)--------uc pl.O.neapo 850 UGACG|GU-ACUU-GAGGAA-UAAGCAUC|GGCU-AACU-CCGUG(CCA- pl.O.neapo 900 -GCAGCC|GCGGU---AA-)UACGGGG|GAUGCAAGCGUUAU-CCGGAAU pl.O.neapo 950 CAUUGGGC|GUAAAGCGCCUGUAGGUU|GUCUAAUAAG-|UCU-GUUGUU pl.O.neapo 1000 AAAGACUAGGGC(------------------------------------- pl.O.neapo 1050 ---------------------------------UUA)ACCCUGG-GA-AA pl.O.neapo 1100 GCGAU--GGA-AAC-U|AAU-AG-G-CUUGAG-UA|UGGUA-----GGGG pl.O.neapo 1150 UAGAG|GGAAUUUCUAG-UGUAGCG(GUGAAA)UGCGUAGAUA---UUAG pl.O.neapo 1200 AAAGAACACCGGU---GGC(GAAA)GC|G|CUCUA-CUG|GGCCA--U-- pl.O.neapo 1250 -------------------------------------------------- pl.O.neapo 1300 ----------UACUGACACU|GAG-AGGCGAAAGCUAGGGGAGCAAAAGG pl.O.neapo 1350 G(AUU-A-GAUAC)-CCCUGUAG-|UC-CUA-GCCGUAAACGAUGGAU-- pl.O.neapo 1400 --AC|UA|GGUG-UUGUA--------------------(--------uua pl.O.neapo 1450 uug--)-------------------------------------------- pl.O.neapo 1500 -------------------------------|---UACAGUAUC-GUAGC pl.O.neapo 1550 (UAAC)GCGU-UAAGUAUCC|C|GCCUGGGGAGUACGCUC(GCAA)GGGU pl.O.neapo 1600 GAAACUCAAAGGAAUUGACGGGGGCCC-GCACA-------AGCGGU|GGA pl.O.neapo 1650 GCAUGUGGUUUAAUUCG-(AUGCAACG)CGAAGAACCUUACCAGGGCUUG pl.O.neapo 1700 ACA----UA|-CU-ACA--GA------UCUUUUU-----(GAG-A-)CGA pl.O.neapo 1750 AA-GAG---UG--CC---------(UUYG------)---------GGAA- pl.O.neapo 1800 ---------------|UGUAGAUA|C|AGGUGGUGCAUG|GCU|GUCGUC pl.O.neapo 1850 A|-G-CUCGU|GUC(GUGA)GAUGUUGGG(UUAAGU)CCCGCAACGAGCG pl.O.neapo 1900 CAACCCUCG|UUUUUA-G-UUGCC-------------------------- pl.O.neapo 1950 -------------------------------------------------- pl.O.neapo 2000 -------------------------------------------------- pl.O.neapo 2050 -----------------------------(aauuuauug-)--------- pl.O.neapo 2100 |GGAUCUCUAGAGAGACUGCCGGU(GAUAA----)--------------- pl.O.neapo 2150 ---------ACCGGAGGAAGGUGAGGAUGACGUC-AA--GUCAGCAUGCC pl.O.neapo 2200 CCUUAUGUCCUGGGCCAC-ACACGUGCUACAAUGAC--AAAGACAAAGAG pl.O.neapo 2250 UC----GCAAAUUC--------------------(----GCGA-)----- pl.O.neapo 2300 --------------GAAC-UAGCUAAUC-UCAU-AAACUUUGUCCAAGUU pl.O.neapo 2350 CGGAUUGUAGGC(--UGCAACUC)GCCUACAUGAAGUUGGAAUCGCU--- pl.O.neapo 2400 ---AGUAAU-CGCUGG(UC--AG-CAU)ACAGCGGUGAAUUC--GUU--- pl.O.neapo 2450 -----------------CCCGGGCCUUGUACACACCGCCCGUCACACCAU pl.O.neapo 2500 GGGAGCUGG-UCAUACCCAACACCGUU---AGUCU-AACC-(-----auu pl.O.neapo 2550 u------)-GG-AGG-ACG-AC-GUCU-AAGG-UAGGGCUAGUGACUGGG pl.O.neapo 2600 GUGAAGUCGUAACAAGGUAGCCGUACU(GGAA)GGUGCGGCUGGAUCACC pl.O.neapo 2650 UCCUAUaa|~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ pl.O.neapo 2700 ~~~~~~~~~~~~~~~~| chl.Ochros 0 |---------UGCCUGCAGAGAG-UU(Y-GA)UCCU|GGCUCAGGAUGAA chl.Ochros 50 CGC-UGGCGGUAUGCUU--AACACAUGCAAGUCGAACG|AG--------- chl.Ochros 100 -------aguu(uu------------------u-------)aacu----- chl.Ochros 150 ----------------CU--AGU--GGCGAACGGGUGCGUAA-UACGUGA chl.Ochros 200 GA-AUCUGC-CCUU------------------------------------ chl.Ochros 250 -------------------------------------------------A chl.Ochros 300 GGA---------GGGGAAUAACUG------------------------UU chl.Ochros 350 G(GAAA)CGA-CAGCUAAAUCC-CCAU-AU-------------------- chl.Ochros 400 ------------------GCC-------(gaga---)-------GGU--- chl.Ochros 450 ---GAAAU----------------------AGU-------------(--- chl.Ochros 500 -------uuau------)---------|----ACUGCCUAAGGA-UGA|G chl.Ochros 550 -CUCGCGC|-CUGAUUA-GCUUGUUGG-UA-AG(G-UAAUGG)-CUUACC chl.Ochros 600 AA|GGCCACGAU|CAGUAGCUG|GUUU(GAGA)GAAUGAUCAGC|CACAC chl.Ochros 650 UGGGA(CUGAGACACG)GCCCAGA-C--UCC(UC-CG)GG-A--GGCAG- chl.Ochros 700 CAGUGAGG-AAUUUUCCG-CAAU-GGGC-(-GAAA)-GCCU-GACGGA|G chl.Ochros 750 CAAUACCGCGUGAGGGAUGAAGGAU(---UUUG--)GU-CU--GUAAACC chl.Ochros 800 UC|UUUU-CUCAAGAAAGAAGU--------(--------)--------uc chl.Ochros 850 UGACG|GU-ACUU-GAGGAA-UAAGCAUC|GGCU-AACU-CCGUG(CCA- chl.Ochros 900 -GCAGCC|GCGGU---AA-)UACGGGG|GAUGCAAGCGUUAU-CCGGAAU chl.Ochros 950 CAUUGGGC|GUAAAGCGCCUGUAGGUU|GUCUAAUAAG-|UCU-GUUGUU chl.Ochros 1000 AAAGACUAGGGC(------------------------------------- chl.Ochros 1050 ---------------------------------UUA)ACCCUGG-GA-AA chl.Ochros 1100 GCGAU--GGA-AAC-U|ACU-AG-G-CUUGAG-UA|UGGUA-----GGGG chl.Ochros 1150 UAGAG|GGAAUUUCUAG-UGUAGCG(GUGAAA)UGCGUAGAUA---UUAG chl.Ochros 1200 AAAGAACACCGGU---GGC(GAAA)GC|G|CUCUA-CUG|GGCCA--U-- chl.Ochros 1250 -------------------------------------------------- chl.Ochros 1300 ----------UACUGACACU|GAG-AGGCGAAAGCUAGGGGAGCAAAAGG chl.Ochros 1350 G(AUU-A-GAUAC)-CCCUGUAG-|UC-CUA-GCCGUAAACGAUGGAU-- chl.Ochros 1400 --AC|UA|GGUG-UUGUA--------------------(--------uya chl.Ochros 1450 uua--)-------------------------------------------- chl.Ochros 1500 |------------------------------|---UACAGUAUC-GUAGC chl.Ochros 1550 (UAAC)GCGU-UAAGUAUCC|C|GCCUGGGGAGUACGCUC(GCAA)GGGU chl.Ochros 1600 GAAACUCAAAGGAAUUGACGGGGGCCC-GCACA-------AGCGGU|GGA chl.Ochros 1650 GCAUGUGGUUUAAUUCG-(AUGCAACG)CGAAGAACCUUACCAGGGCUUG chl.Ochros 1700 ACA----UA|-CU-ACA--AA------UCUUUUU-----(GAG-A-)CGA chl.Ochros 1750 AA-GAG---UG--CC---------(UUCG------)---------GGAA- chl.Ochros 1800 ---------------|UGUAGAUA|C|AGGUGGUGCAUG|GCU|GUCGUC chl.Ochros 1850 A|-G-CUCGU|GUC(GUGA)GAUGUUGGG(UUAAGU)CCCGCAACGAGCG chl.Ochros 1900 CAACCCUCG|UUUUUA-G-UUGCC-------------------------- chl.Ochros 1950 -------------------------------------------------- chl.Ochros 2000 -------------------------------------------------- chl.Ochros 2050 -----------------------------(aauuuauug-)--------- chl.Ochros 2100 |GGAUUUCUAGAGAGACUGCCGGU(GAUAA----)--------------- chl.Ochros 2150 ---------ACCGGAGGAAGGUGAGGAUGACGUC-AA--GUCAGCAUGCC chl.Ochros 2200 CCUUAUGCCCUGGGCCAC-ACACGUGCUACAAUGAC--AAAGACAAAGAG chl.Ochros 2250 UC----GCAAAUUC--------------------(----GCGA-)----- chl.Ochros 2300 --------------GAAC-UAGCUAAUC-UCAU-AAACUUUGUCCAAGUU chl.Ochros 2350 CGGAUUGUAGGC(--UGCAACUC)GCCUACAUGAAGUUGGAAUCGCU--- chl.Ochros 2400 ---AGUAAU-CGCUGG(UC--AG-CAU)ACAGCGGUGAAUUC--GUU--- chl.Ochros 2450 -----------------CCCGGGCCUUGUACACACCGCCCGUCACACCAU chl.Ochros 2500 GGGAGCUGG-UCAUACCCAACACCGUU---AGUCU-AACC-(-----auu chl.Ochros 2550 u------)-GG-AGG-ACG-GC-GUCU-AAGG-UAGGGCUAGUGACUGGG chl.Ochros 2600 GUGAAGUCGUAACAAGGUAGCCGUACU(GGAA)GGUGNGGNUGGAUCACC chl.Ochros 2650 UCCUUG--|~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ chl.Ochros 2700 ~~~~~~~~~~~~~~~~| (3)-Rhodop 0 | (3)-Rhodop 23 - (3)-Rhodop 85 -- (3)-Rhodop 88 - (3)-Rhodop 103 --------------------------------------------- (3)-Rhodop 148 - (3)-Rhodop 156 --------- (3)-Rhodop 173 -- (3)-Rhodop 178 ------------------- (3)-Rhodop 297 -- (3)-Rhodop 303 --------- (3)-Rhodop 316 -------- (3)-Rhodop 324 --------- (3)-Rhodop 345 --- (3)-Rhodop 354 -- (3)-Rhodop 360 - (3)-Rhodop 371 - (3)-Rhodop 375 - (3)-Rhodop 378 - (3)-Rhodop 380 --------------------------- (3)-Rhodop 412 - (3)-Rhodop 422 ---- (3)-Rhodop 426 -- (3)-Rhodop 438 ------ (3)-Rhodop 462 ------------------ (3)-Rhodop 491 - (3)-Rhodop 494 - (3)-Rhodop 499 - (3)-Rhodop 507 -- (3)-Rhodop 538 - (3)-Rhodop 544 - (3)-Rhodop 550 - (3)-Rhodop 569 -- (3)-Rhodop 581 - (3)-Rhodop 585 - (3)-Rhodop 606 ----- (3)-Rhodop 612 - (3)-Rhodop 618 | (3)-Rhodop 633 | (3)-Rhodop 639 | (3)-Rhodop 643 -- (3)-Rhodop 666 - (3)-Rhodop 677 - (3)-Rhodop 680 | (3)-Rhodop 684 - (3)-Rhodop 690 - (3)-Rhodop 692 -- (3)-Rhodop 698 --- (3)-Rhodop 715 - (3)-Rhodop 718 - (3)-Rhodop 730 - (3)-Rhodop 734 -------------------------------------- (3)-Rhodop 772 ---------------------- (3)-Rhodop 805 ------- (3)-Rhodop 822 - (3)-Rhodop 828 - (3)-Rhodop 830 | (3)-Rhodop 833 ----- (3)-Rhodop 841 ------------- (3)-Rhodop 854 -- (3)-Rhodop 866 - (3)-Rhodop 889 - (3)-Rhodop 899 --- (3)-Rhodop 907 - (3)-Rhodop 913 --- (3)-Rhodop 918 -| (3)-Rhodop 926 | (3)-Rhodop 931 - (3)-Rhodop 942 - (3)-Rhodop 958 | (3)-Rhodop 988 - (3)-Rhodop 990 | (3)-Rhodop 993 - (3)-Rhodop 1074 --------- (3)-Rhodop 1086 - (3)-Rhodop 1089 - (3)-Rhodop 1097 - (3)-Rhodop 1099 | (3)-Rhodop 1105 --- (3)-Rhodop 1116 - (3)-Rhodop 1120 - (3)-Rhodop 1123 - (3)-Rhodop 1125 ---- (3)-Rhodop 1131 |- (3)-Rhodop 1142 ---- (3)-Rhodop 1164 - (3)-Rhodop 1165 ------ (3)-Rhodop 1177 - (3)-Rhodop 1183 -------------------------------------|----- (3)-Rhodop 1226 -------------- (3)-Rhodop 1243 - (3)-Rhodop 1245 -- (3)-Rhodop 1299 ----------- (3)-Rhodop 1314 - (3)-Rhodop 1320 - (3)-Rhodop 1325 | (3)-Rhodop 1355 - (3)-Rhodop 1361 ------- (3)-Rhodop 1371 | (3)-Rhodop 1373 -- (3)-Rhodop 1383 - (3)-Rhodop 1387 - (3)-Rhodop 1398 ---- (3)-Rhodop 1404 - (3)-Rhodop 1412 - (3)-Rhodop 1415 - (3)-Rhodop 1421 - (3)-Rhodop 1427 --------------------- (3)-Rhodop 1452 --- (3)-Rhodop 1464 -- (3)-Rhodop 1467 -- (3)-Rhodop 1474 ---- (3)-Rhodop 1479 -- (3)-Rhodop 1483 -- (3)-Rhodop 1487 ------------ (3)-Rhodop 1499 --------------------------------- (3)-Rhodop 1536 ------------ (3)-Rhodop 1560 - (3)-Rhodop 1565 | (3)-Rhodop 1572 | (3)-Rhodop 1575 - (3)-Rhodop 1595 - (3)-Rhodop 1626 - (3)-Rhodop 1646 - (3)-Rhodop 1675 ------ (3)-Rhodop 1682 ------- (3)-Rhodop 1704 --- (3)-Rhodop 1709 | (3)-Rhodop 1713 - (3)-Rhodop 1721 ------ (3)-Rhodop 1736 --- (3)-Rhodop 1743 - (3)-Rhodop 1752 - (3)-Rhodop 1767 ------- (3)-Rhodop 1777 --------- (3)-Rhodop 1787 --- (3)-Rhodop 1790 ----- (3)-Rhodop 1802 ------------- (3)-Rhodop 1821 -- (3)-Rhodop 1824 | (3)-Rhodop 1832 --- (3)-Rhodop 1842 ---------- (3)-Rhodop 1865 -- (3)-Rhodop 1868 -- (3)-Rhodop 1871 -- (3)-Rhodop 1883 ---------- (3)-Rhodop 1893 ------ (3)-Rhodop 1901 - (3)-Rhodop 1916 - (3)-Rhodop 1924 - (3)-Rhodop 1937 - (3)-Rhodop 1939 -- (3)-Rhodop 1959 -------------------------------------- (3)-Rhodop 1997 -------------------------------------------------- (3)-Rhodop 2047 -------------------------------- (3)-Rhodop 2087 --- (3)-Rhodop 2093 -- (3)-Rhodop 2114 ||| (3)-Rhodop 2130 ---- (3)-Rhodop 2136 ------ (3)-Rhodop 2142 - (3)-Rhodop 2153 ------ (3)-Rhodop 2187 -- (3)-Rhodop 2218 - (3)-Rhodop 2237 - (3)-Rhodop 2253 --- (3)-Rhodop 2264 -------------------- (3)-Rhodop 2285 ---- (3)-Rhodop 2293 - (3)-Rhodop 2328 - (3)-Rhodop 2363 -- (3)-Rhodop 2397 ------ (3)-Rhodop 2420 - (3)-Rhodop 2443 - (3)-Rhodop 2448 ------------------- (3)-Rhodop 2527 --- (3)-Rhodop 2561 - (3)-Rhodop 2577 - (3)-Rhodop 2582 - (3)-Rhodop 2657 - (3)-Rhodop 2716 | chl.P.pu.1 0 |---------AUACCACGGAGAG-UU(U-GA)UCCU|GGCUCAGGAUGAA chl.P.pu.1 50 CGC-UGGCGGUAUGCUU--AACACAUGCAAGUCGAACG|AA--------- chl.P.pu.1 100 --------agu(uu------------------guaaaa--)acu------ chl.P.pu.1 150 ----------------UU--AGU--GGCGGACGGGUGAGUAA-CACGUGA chl.P.pu.1 200 GA-AUCUAC-CUUU------------------------------------ chl.P.pu.1 250 -------------------------------------------------A chl.P.pu.1 300 GGA---------AAGGCAUAACAG------------------------UU chl.P.pu.1 350 G(GAAA)CGA-CUGCUAAAGCC-UCAU-AU-------------------- chl.P.pu.1 400 ------------------GCU-------(gcaa---)-------AGU--- chl.P.pu.1 450 ---GAAAA----------------------AGA-------------(--- chl.P.pu.1 500 -------GAAA------)---------|----UCUGCCUAAAGA-UGA|G chl.P.pu.1 550 -CUCGCGC|-CUGAUUA-GCUAGUUGG-UA-AG(G-UAACUG)-CUUACC chl.P.pu.1 600 AA|GGCAACGAU|CAGUAGCUG|GUUU(GAGA)GGACGACCAGC|CACAC chl.P.pu.1 650 UGGGA(CUGAGACACG)GCCCAGA-C--UCC(UA-CG)GG-A--GGCAG- chl.P.pu.1 700 CAGUGGGG-AAUUUUCCG-CAAU-GGGC-(-GAAA)-GCCU-GACGGA|G chl.P.pu.1 750 CAAUACCGCGUGAGGGAUGAAGGCU(---CGUG--)GG-UU--GUAAACC chl.P.pu.1 800 UC|UUUU-CUUAGGGAAGAAGA--------(--------)--------UC chl.P.pu.1 850 UGACG|GU-ACCU-AAAGAA-UAAGCAUC|GGCU-AACU-CCGUG(CCA- chl.P.pu.1 900 -GCAGCC|GCGGU---AA-)UACGGAG|GAUGCAAGCGUUAU-CCGGAAU chl.P.pu.1 950 CACUGGGC|GUAAAGCGUCUGUAGGUU|GCUUAAUAAG-|UCU-GCUGUU chl.P.pu.1 1000 AAAGAUUGGGGC-------------------------------------- chl.P.pu.1 1050 ---------------------------------UUA)ACCCCAA-AG-CA chl.P.pu.1 1100 GCAGU--GGA-AAC-U|GUU-AA-G-CUAGAG-UA|UGGUA-----AGGG chl.P.pu.1 1150 UAAAG|GGAAUUCCCAG-UGUAGCG(GUGAAA)UGCGUAGAUA---UUGG chl.P.pu.1 1200 GAAGAACACCAGA---GGC(GAAA)GC|G|CUUUA-CUA|GACCA--U-- chl.P.pu.1 1250 -------------------------------------------------- chl.P.pu.1 1300 ----------UGCUGACACU|CAG-AGACGAAAGCUAGGGGAGCGAAUGG chl.P.pu.1 1350 G(AUU-A-GAUAC)-CCCAGUAG-|UC-CUA-GCCGUAAACGAUGGAU-- chl.P.pu.1 1400 --AC|UA|GAUG-UUGCGCG------------------(-------uauu chl.P.pu.1 1450 gacc-)-------------------------------------------- chl.P.pu.1 1500 |------------------------------|-CGUGCAGUAUC-GUAGC chl.P.pu.1 1550 (UAAC)GCGU-UAAGUAUCC|C|GCCUGGGGAGUACGCUC(GCAA)GAGU chl.P.pu.1 1600 GAAACUCAAAGGAAUUGACGGGGGCCC-GCACA-------AGCGGU|GGA chl.P.pu.1 1650 GCAUGUGGUUUAAUUCG-(AUGCAACG)CGAAGAACCUUACCAGGACUUG chl.P.pu.1 1700 ACA----UG|-UC-GCA--AA------UUUUCUU-----(GAA-A-)AAG chl.P.pu.1 1750 GA-AAG---UG--CC---------(UUAG------)---------GGAA- chl.P.pu.1 1800 ---------------|UGCGAACA|C|AGGUGGUGCAUG|GCU|GUCGUC chl.P.pu.1 1850 A|-G-CUCGU|GUC(GUGA)GAUGUUGGG(UUAAGU)CCCGCAACGAGCG chl.P.pu.1 1900 CAACCCUUG|UCUUUA-G-UUGCCA-UCA--------------------- chl.P.pu.1 1950 -------------------------------------------------- chl.P.pu.1 2000 -------------------------------------------------- chl.P.pu.1 2050 -----------------------------(--uuuagu--)-------UG chl.P.pu.1 2100 |GGCACUCUAAAGAGACUGCCGGU(GACAA----)--------------- chl.P.pu.1 2150 ---------GCCGGAGGAAGGUGAGGAUGACGUC-AA--GUCAGCAUGCC chl.P.pu.1 2200 CCUUAUGUCCUGGGCUAC-ACACGUGCUACAAUGGU--CGCGACAAAGAG chl.P.pu.1 2250 UU----GCAAACUU--------------------(----GCAA-)----- chl.P.pu.1 2300 --------------AAGC-UAGCUAAUC-UCGU-AAACGCGGCCUCAGUU chl.P.pu.1 2350 CGGAUUGCAGGC(--UGCAACUC)GCCUGCAUGAAGGUGGAAUCGCU--- chl.P.pu.1 2400 ---AGUAAU-CGCCGG(UC--AGCUAC)ACGGCGGUGAAUCC--GUU--- chl.P.pu.1 2450 -----------------CCCGGGCCUUGUACACACCGCCCGUCACACCAU chl.P.pu.1 2500 GGGAGCUGG-CCACGCCCGAAGUCGUU---ACCCU-AACC-(-----uuu chl.P.pu.1 2550 u------)-GG-AGG-GGG-GC-GCCU-AAGG-UAGGGCUAGUGACUGGG chl.P.pu.1 2600 GUGAAGUCGUAACAAGGUAGCCGUACU(GGAA)GGUGCGGCUGGAUCACC chl.P.pu.1 2650 UCCUUU--|~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ chl.P.pu.1 2700 ~~~~~~~~~~~~~~~~| chl.P.pu.A 0 |---uacuggaUACCACGGAGAG-UU(U-GA)UCCU|GGCUCAGGAUGAA chl.P.pu.A 50 CGC-UGGCGGUAUGCUU--AACACAUGCAAGUCGAACG|AA--------- chl.P.pu.A 100 ------aguuu(gu------------------aa------)aaacu---- chl.P.pu.A 150 ----------------UU--AGU--GGCGGACGGGUGAGUAA-CACGUGA chl.P.pu.A 200 GA-AUCUAC-CUUU------------------------------------ chl.P.pu.A 250 -------------------------------------------------A chl.P.pu.A 300 GGA---------AAGGCAUAACAG------------------------UU chl.P.pu.A 350 G(GAAA)CGA-CUGCUAAAGCC-UCAU-AU-------------------- chl.P.pu.A 400 ------------------GCU-------(GCAA---)-------AGU--- chl.P.pu.A 450 ---GAAAA----------------------aga-------------(--- chl.P.pu.A 500 -------gaaa------)---------|----UCUGCCUAAAGA-UGA|G chl.P.pu.A 550 -CUCGCGC|-CUGAUUA-GCUAGUUGG-UA-AG(G-UAACUG)-CUUACC chl.P.pu.A 600 AA|GGCAACGAU|CAGUAGCUG|GUUU(GAGA)GGACGACCAGC|CACAC chl.P.pu.A 650 UGGGA(CUGAGACACG)GCCCAGA-C--UCC(UA-CG)GG-A--GGCAG- chl.P.pu.A 700 CAGUGGGG-AAUUUUCCG-CAAU-GGGC-(-GAAA)-GCCU-GACGGA|G chl.P.pu.A 750 CAAUACCGCGUGAGGGAUGAAGGCU(---CGUG--)GG-UU--GUAAACC chl.P.pu.A 800 UC|UUUU-CUUAGGGAAGAAGA--------(--------)--------UC chl.P.pu.A 850 UGACG|GU-ACCU-AAAGAA-UAAGCAUC|GGCU-AACU-CCGUG(CCA- chl.P.pu.A 900 -GCAGCC|GCGGU---AA-)UACGGAG|GAUGCAAGCGUUAU-CCGGAAU chl.P.pu.A 950 CACUGGGC|GUAAAGCGUCUGUAGGUU|GCUUAAUAAG-|UCU-GCUGUU chl.P.pu.A 1000 AAAGAUUGGGGC(------------------------------------- chl.P.pu.A 1050 ---------------------------------UUA)ACCCCAA-ag-cA chl.P.pu.A 1100 GCAGU--GGA-AAC-U|GUU-AA-G-CUAGAG-UA|UGGUA-----AGGG chl.P.pu.A 1150 UAAAG|GGAAUUC~~~~~~~~~~~~(~~~~~~)~~~~~~~~~~~~~~~~~ chl.P.pu.A 1200 ~~~~~~~~~~~~~~~~~~~(~~~~)~~|~|~~~~~~~~~|~~~~~~~~~~ chl.P.pu.A 1250 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ chl.P.pu.A 1300 ~~~~~~~~~~~~~~~~~~~~|~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ chl.P.pu.A 1350 ~(~~~~~-~~~~~)-~~~~~~~~-|~~-~~~~~~~~~~~~~~~~~~~~~~ chl.P.pu.A 1400 ~~~~|~~|~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~(-------~~~~ chl.P.pu.A 1450 ~~~~-)~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-- chl.P.pu.A 1500 |~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~|~~~~~~~~~~~~~~~~~~ chl.P.pu.A 1550 (~~~~)~~~~~~~~~~~~~~|~|~~~~~~~~~~~~~~~~~(~~~~)~~~~ chl.P.pu.A 1600 ~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~-------~~~~~~|~~~ chl.P.pu.A 1650 ~~~~~~~~~~~~~~~~~-(~~~~~~~~)~~~~~~~~~~~~~~~~~~~~~~ chl.P.pu.A 1700 ~~~~~~~~~|~~~~~~~--~~~----~~~~~~~~-----(~~~~~-)~~~ chl.P.pu.A 1750 ~~~~~~~~~~~--~~~~~~~~~~~(~~~~~-----)~~~~~~~~~~~~~- chl.P.pu.A 1800 -------------~-|~~~~~~~~|~|~~~~~~~~~~~~|~~~|~~~~~~ chl.P.pu.A 1850 ~|-~~~~~~~|~~~(~~~~)~~~~~~~~~(~~~~~~)~~~~~~~~~~~~~ chl.P.pu.A 1900 ~~~~~~~~~|~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ chl.P.pu.A 1950 ~~~~~~~~~~~~~~~~~~~~---------~---------~~~~~~~~~~~ chl.P.pu.A 2000 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ chl.P.pu.A 2050 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~(~~~~~~~~~~)~~~~--~~~ chl.P.pu.A 2100 |~~~~~~~~~~~~~~~~~~~~~~~(~~~~~~~~~)--------~~----~ chl.P.pu.A 2150 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~ chl.P.pu.A 2200 ~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ chl.P.pu.A 2250 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~--~(--~~~~~~-)~~~~~ chl.P.pu.A 2300 ~~~~~~~~------~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~ chl.P.pu.A 2350 ~~~~~~~~~~~~(--~~~~~~~~)~~~~~~~~~~~~~~~~~~~~~~~~~~ chl.P.pu.A 2400 ~~~~~~~~~~~~~~~~~(~~~~~~~~~)~~~~~~~~~~~~~~~~~~~~~~ chl.P.pu.A 2450 ~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ chl.P.pu.A 2500 ~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~(~~~~-~~~ chl.P.pu.A 2550 ~~~~~~~)~~~~~~~-~~~-~~-~~~~-~~~~~~~~~~~~~~~~~~~~~~ chl.P.pu.A 2600 ~~~~~~~~~~~~~~~~~~~~~~~~~~~(~~~~)~~~~~~~~~~~~~~~~~ chl.P.pu.A 2650 ~~~~~~~~|~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ chl.P.pu.A 2700 ~~~~~~~~~~~~~~~~| chl.P.pu.B 0 |---uacuggaUACCACGGAGAG-UU(U-GA)UCCU|GGCUCAGGAUGAA chl.P.pu.B 50 CGC-UGGCGGUAUGCUU--AACACAUGCAAGUCGAACG|AA--------- chl.P.pu.B 100 ------aguuu(gu------------------aa------)gaacu---- chl.P.pu.B 150 ----------------UU--AGU--GGCGGACGGGUGAGUAA-CACGUGA chl.P.pu.B 200 GA-AUCUAC-CUUU------------------------------------ chl.P.pu.B 250 -------------------------------------------------A chl.P.pu.B 300 GGA---------AAGGCAUAACAG------------------------UU chl.P.pu.B 350 G(GAAA)CGA-CUGCUAAAGCC-UUAU-AU-------------------- chl.P.pu.B 400 ------------------GCU-------(GCAA---)-------AGU--- chl.P.pu.B 450 ---GAAAA----------------------aga-------------(--- chl.P.pu.B 500 -------gaaa------)---------|----UCUGCCUGAAGA-UGA|G chl.P.pu.B 550 -CUCGCGC|-CUGAUUA-GCUAGUUGG-UA-AG(G-UAACUG)-CUUACC chl.P.pu.B 600 AA|GGCAACGAU|CAGUAGCUG|GUUU(GAGA)GGACGACCAGC|CACAC chl.P.pu.B 650 UGGGA(CUGAGACACG)GCCCAGA-C--UCC(UA-CG)GG-A--GGCAG- chl.P.pu.B 700 CAGUGGGG-AAUUUUCCG-CAAU-GGGC-(-GAAA)-GCCU-GACGGA|G chl.P.pu.B 750 CAAUACCGCGUGAGGGAUGAAGGCC(---CGUG--)GG-UU--GUAAACC chl.P.pu.B 800 UC|UUUU-CUUAGGGAAGAAGA--------(--------)--------UC chl.P.pu.B 850 UGACG|GU-ACCU-AAGGAA-UAAGCAUC|GGCU-AACU-CCGUA(CCA- chl.P.pu.B 900 -GCAGCC|GCGGU---AA-)UACGGAG|AAUGCAAGCGUUAU-CCGGAAU chl.P.pu.B 950 CACUGGGC|GUAAAGCGUCUGUAGGUU|GCUUAAUAAG-|UCU-GCUGUU chl.P.pu.B 1000 AAAGAUUGGGGC(------------------------------------- chl.P.pu.B 1050 ---------------------------------UCA)ACCCCAA-AG-ca chl.P.pu.B 1100 GCAGU--GGA-AAC-U|GUU-AA-G-CUAGAG-UA|UGGUA-----AGGG chl.P.pu.B 1150 UAAAG|GGAAUUC~~~~~~~~~~~~(~~~~~~)~~~~~~~~~~~~~~~~~ chl.P.pu.B 1200 ~~~~~~~~~~~~~~~~~~~(~~~~)~~|~|~~~~~~~~~|~~~~~~~~~~ chl.P.pu.B 1250 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ chl.P.pu.B 1300 ~~~~~~~~~~~~~~~~~~~~|~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ chl.P.pu.B 1350 ~(~~~~~-~~~~~)-~~~~~~~~-|~~-~~~~~~~~~~~~~~~~~~~~~~ chl.P.pu.B 1400 ~~~~|~~|~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~(-------~~~~ chl.P.pu.B 1450 ~~~~-)~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-- chl.P.pu.B 1500 |~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~|~~~~~~~~~~~~~~~~~~ chl.P.pu.B 1550 (~~~~)~~~~~~~~~~~~~~|~|~~~~~~~~~~~~~~~~~(~~~~)~~~~ chl.P.pu.B 1600 ~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~-------~~~~~~|~~~ chl.P.pu.B 1650 ~~~~~~~~~~~~~~~~~-(~~~~~~~~)~~~~~~~~~~~~~~~~~~~~~~ chl.P.pu.B 1700 ~~~~~~~~~|~~~~~~~--~~~----~~~~~~~~-----(~~~~~-)~~~ chl.P.pu.B 1750 ~~~~~~~~~~~--~~~~~~~~~~~(~~~~~-----)~~~~~~~~~~~~~- chl.P.pu.B 1800 -------------~-|~~~~~~~~|~|~~~~~~~~~~~~|~~~|~~~~~~ chl.P.pu.B 1850 ~|-~~~~~~~|~~~(~~~~)~~~~~~~~~(~~~~~~)~~~~~~~~~~~~~ chl.P.pu.B 1900 ~~~~~~~~~|~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ chl.P.pu.B 1950 ~~~~~~~~~~~~~~~~~~~~---------~---------~~~~~~~~~~~ chl.P.pu.B 2000 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ chl.P.pu.B 2050 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~(~~~~~~~~~~)~~~~--~~~ chl.P.pu.B 2100 |~~~~~~~~~~~~~~~~~~~~~~~(~~~~~~~~~)--------~~----~ chl.P.pu.B 2150 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~ chl.P.pu.B 2200 ~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ chl.P.pu.B 2250 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~--~(--~~~~~~-)~~~~~ chl.P.pu.B 2300 ~~~~~~~~------~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~ chl.P.pu.B 2350 ~~~~~~~~~~~~(--~~~~~~~~)~~~~~~~~~~~~~~~~~~~~~~~~~~ chl.P.pu.B 2400 ~~~~~~~~~~~~~~~~~(~~~~~~~~~)~~~~~~~~~~~~~~~~~~~~~~ chl.P.pu.B 2450 ~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ chl.P.pu.B 2500 ~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~(~~~~-~~~ chl.P.pu.B 2550 ~~~~~~~)~~~~~~~-~~~-~~-~~~~-~~~~~~~~~~~~~~~~~~~~~~ chl.P.pu.B 2600 ~~~~~~~~~~~~~~~~~~~~~~~~~~~(~~~~)~~~~~~~~~~~~~~~~~ chl.P.pu.B 2650 ~~~~~~~~|~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ chl.P.pu.B 2700 ~~~~~~~~~~~~~~~~| chl.C.cald 0 |~~~~~~~~~~UAUAAUGGAGAG-UU(U-GA)UCCU|GGCUCAGGAUUAA chl.C.cald 50 CGC-UGGCGGUAUGCCU--AACACAUGCAAGUCGUACG|AG--------- chl.C.cald 100 --------aau(uu------------------u-------)auu------ chl.C.cald 150 ----------------CU--AGU--GGCGGACGGGUGAGUAA-CACGUGA chl.C.cald 200 GA-AUCUAC-CUCU------------------------------------ chl.C.cald 250 -------------------------------------------------A chl.C.cald 300 GGA---------GGGGGAUAACAG------------------------UU chl.C.cald 350 G(GAAA)CGA-UUGCUAAAACC-CCAU-AU-------------------- chl.C.cald 400 ------------------GCCA------(uuau---)------UGGU--- chl.C.cald 450 ---GAAAA----------------------aga-------------(--- chl.C.cald 500 -------uuua------)---------|----UCUGCCUGGAGA-UGA|G chl.C.cald 550 -CUCGCGG|-CUGAUUA-GCUAGUUGG-UA-GG(G-UAAUGG)-CUUACC chl.C.cald 600 AA|GGCAACGAU|CAGUAGCUG|GUCU(UAGA)GGAUGAUCAGC|CACAC chl.C.cald 650 UGGAA(CUGAGAUACG)GUCCAGA-C--UCC(UA-CG)GG-A--GGCAG- chl.C.cald 700 CAGUGGGG-AAUUUUCCA-CAAU-GGGC-(-GAAA)-GCCU-GAUGGA|G chl.C.cald 750 CAAUACCGUGUGAGGGAUGAAGGCC(---UGUG--)GG-UU--GUAAACC chl.C.cald 800 UC|UUUU-UUCAGGAAAGAAAC--------(--------)--------UU chl.C.cald 850 UGACG|GU-ACCU-GAAGAA-UAAGCAUC|GGCU-AACU-CCGUG(CCA- chl.C.cald 900 -GCAGCC|GCGGU---AA-)UACGGAG|GAUGCAAGCGUUAU-CCGGAAU chl.C.cald 950 CACUGGGC|GUAAAGCGUCUGUAGGUG|GUUUAUCAAG-|UCU-GCUGUU chl.C.cald 1000 AAAGCUUGAGGC(------------------------------------- chl.C.cald 1050 ---------------------------------UUA)ACCUCAA-AA-AA chl.C.cald 1100 GCAGU--GGA-AAC-U|GAU-AG-A-CUAGAG-AA|UGGUA-----GGGG chl.C.cald 1150 CAGAG|AGAAUUCUCAG-UGUAGCG(GUGAAA)UGCGUAGAUA---UUGA chl.C.cald 1200 GAAGAAUACCGAU---AGC(GAAG)GC|G|CUCUG-CUG|GGCCA--U-- chl.C.cald 1250 -------------------------------------------------- chl.C.cald 1300 ----------UACUGACACU|CAG-AGACGAAAGCUAGGGGAGCAAAUGG chl.C.cald 1350 G(AUU-A-GAUAC)-CCCAGUAG-|UC-CUA-GCCGUAAACUAUGGAU-- chl.C.cald 1400 --AC|UA|GAUG-UUGuguga-----------------(--------gua chl.C.cald 1450 aaa--)-------------------------------------------- chl.C.cald 1500 |------------------------------|uuguGCAGUAUC-GAAGC chl.C.cald 1550 (UAAC)GCGU-UAAGUAUCC|C|GCCUGGGAAGUACGCUC(GCAA)GAGU chl.C.cald 1600 GAAACUCAAAGGAAUUGACGGGGACCC-GCACA-------AGCG-U|GGA chl.C.cald 1650 GCAUGUGGUUUAAUUCG-(AUGCAACG)CGAAGAACCUUACCAGGACUUG chl.C.cald 1700 ACA----UG|-UU-ACU--AA------UUUCCUU-----(GAA-A-)GAG chl.C.cald 1750 GA-AAG---UG--CC---------(UUUG------)---------GGAA- chl.C.cald 1800 ---------------|AGUAAACA|C|AGGUGGUGCAUG|GCU|GUCGUC chl.C.cald 1850 A|-G-CUCGU|GUC(GUGA)GAUGUUGGG(UUAAGU)CCCGCAACGAGCG chl.C.cald 1900 CAACCCUUG|UCUUUA-G-UUACCA-UCA--------------------- chl.C.cald 1950 -------------------------------------------------- chl.C.cald 2000 -------------------------------------------------- chl.C.cald 2050 -----------------------------(--uuaagu--)-------UG chl.C.cald 2100 |GGGACUCUAAAGAGACUGCCGGU(GAUAA----)--------------- chl.C.cald 2150 ---------ACCGGAGGAAGGUAAGGAUGAGGUC-AA--GUCAUCAUGCC chl.C.cald 2200 CCUUAUGUCCUGGGCUAC-ACACGUGCUACAAUGGU--UAGGACAAUAAG chl.C.cald 2250 UC----GCAAAUUC--------------------(----GUGA-)----- chl.C.cald 2300 --------------GAAC-UAGCUAAUC-UUAU-AAACCUAAUCUCAGUA chl.C.cald 2350 CGGAUUGUAGGC(--UGCAACUC)GCCUACAUGAAGACGGAAUCGCU--- chl.C.cald 2400 ---AGUAAU-CGCUGG(UC--AGCUAC)ACAGCGGUGAAUAC--GUU--- chl.C.cald 2450 -----------------CCCGGGUCUUGUACACACCGCCCGUCACACCAU chl.C.cald 2500 GGGAGCUGG-CCAUGUCCGAAAUCAUU---ACUCU-AACC-(---u-uaa chl.C.cald 2550 u------)-GG-AGG-AGG-AU-GCUU-AAGG-CAGGGCUAGUGACUGGG chl.C.cald 2600 GUGAAGUCGUAACAAGGUAGCCGUACU(GGAA)GGUGCGGCUGGAUUACC chl.C.cald 2650 UCCUUU--|~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ chl.C.cald 2700 ~~~~~~~~~~~~~~~~| Chl.Cya.ca 0 |---------AUAUUAUUGAGAG-UU(U-GA)UCCU|GGCUCAGGAUGAA Chl.Cya.ca 50 CGC-UGGCGGUAUGCUU--AACACAUGCAAGUCGUACG|AA--------- Chl.Cya.ca 100 --------aac(uu------------------uaau----)guu------ Chl.Cya.ca 150 ----------------UU--AGU--GGCGAACGGGUGAGUAA-CACGUGA Chl.Cya.ca 200 GA-AUUUGC-CCUU------------------------------------ Chl.Cya.ca 250 -------------------------------------------------A Chl.Cya.ca 300 GGA---------AGAGAAUAACGA------------------------UU Chl.Cya.ca 350 G(GAAA)CGA-UCGCUAAUACU-CUAU-AU-------------------- Chl.Cya.ca 400 ------------------CUCUAAGU--(uuua---)--AUUUAGAU--- Chl.Cya.ca 450 ---GAAAAagauuagauuuguacauuguguagau------------(--- Chl.Cya.ca 500 --------uua------)---------|---AUCUGCCUAAGGA-GAA|G Chl.Cya.ca 550 -CUCGCGG|-CUGAUUA-GCUAGUUGG-UA-AG(G-UAAAUG)-CUUACC Chl.Cya.ca 600 AA|GGCUAUGAU|CAGUAGCUG|GUCU(AAGA)GGACGAUCAGC|CACAC Chl.Cya.ca 650 UGGGA(CUGAGACACG)GCCCAGA-C--UCC(UA-CG)GG-A--GGCAG- Chl.Cya.ca 700 CAGUGGGG-AAUUUUCUG-CAAU-GGGC-(-GCAA)-GCCU-GACAGA|G Chl.Cya.ca 750 CAAUACCGCGUGAAGGAAGAAGGCC(---UUAG--)GG-UU--GUAAACU Chl.Cya.ca 800 UC|UUUU-GUUAGGGAAGAAAU--------(--------)--------UU Chl.Cya.ca 850 UGACG|GU-ACCU-AAAGAA-UAAGCAUC|GGCU-AACU-CCGUG(CCA- Chl.Cya.ca 900 -GCAGCC|GCGGU---AA-)UACGGGG|GAUGCAAGCGUUAU-CCGGAAU Chl.Cya.ca 950 UAUUGGGC|GUAAAGCGUUUGUAGGUG|GUUUAGCAAG-|UCU-GUUGUU Chl.Cya.ca 1000 AAAUCUUGAGGC(------------------------------------- Chl.Cya.ca 1050 ---------------------------------UUA)ACUUCAA-AC-AA Chl.Cya.ca 1100 GCAAG--AGA-AAC-U|GCU-AG-A-CUAGAG-UG|UGGUG-----GAGG Chl.Cya.ca 1150 CAGAG|GGAAUUUCCAG-UGUAGCG(GUGAAA)UGCGUAGAUA---UUGG Chl.Cya.ca 1200 AAAGAACACCAGA---AGC(GAAA)GC|G|CUUUG-CUA|UACCA--A-- Chl.Cya.ca 1250 -------------------------------------------------- Chl.Cya.ca 1300 ----------AACUGACACU|GAG-AAACGAAAGCUAGGGGAGCAAAUGG Chl.Cya.ca 1350 G(AUU-A-GAUAC)-CCCAGUAG-|UC-CUA-GCUGUAAACUAUGGAU-- Chl.Cya.ca 1400 --AC|UA|GAUG-UUGCGUAA-----------------(---------aa Chl.Cya.ca 1450 ga---)-------------------------------------------- Chl.Cya.ca 1500 |------------------------------|UUAUGCAGUGUC-AUAGC Chl.Cya.ca 1550 (UAAC)GCGU-UAAGUAUCC|C|GCCUGGGAAGUACGCUC(GCAA)GAGU Chl.Cya.ca 1600 GAAACUCAAAGGAAUUGACGGGGGCCC-GCACA-------AGCGGU|GGA Chl.Cya.ca 1650 GCAUGUGGUUUAAUUCG-(AUGCAACG)CGAAGAACCUUACCAAAGCUUG Chl.Cya.ca 1700 ACA----UG|-UU-GCG--AA------UUUCUU------(uaa-uc)-AA Chl.Cya.ca 1750 GA-AAG---UA--CC---------(UUUU------)---------GGAA- Chl.Cya.ca 1800 ---------------|CGCAAACA|C|AGGUGGUGCAUG|GCU|GUCGUC Chl.Cya.ca 1850 A|-G-CUCGU|GUC(GUGA)GAUGUUGGG(UUAAGU)CCCGCAACGAGCG Chl.Cya.ca 1900 CAACCCUUG|UUUUUA-G-UUGCCA-CCA--------------------- Chl.Cya.ca 1950 -------------------------------------------------- Chl.Cya.ca 2000 -------------------------------------------------- Chl.Cya.ca 2050 -----------------------------(--uuaagu--)-------UG Chl.Cya.ca 2100 |GGAACUUUAAAAAGACUGCCAGU(GACAA----)--------------- Chl.Cya.ca 2150 ---------GCUGGAGGAAGGUGAGGACGACGUC-AA--GUCAUCAUGCC Chl.Cya.ca 2200 CCUUAUGCUUUGGGCUAC-ACACGUGCUACAAUGAC--UAAGACAACGAG Chl.Cya.ca 2250 UC----GCAAAGUU--------------------(----GUGA-)----- Chl.Cya.ca 2300 --------------AACC-UAGCUAAUC-UCUU-AAACUUAGUCUCAGUU Chl.Cya.ca 2350 CAGAUUGUAGGC(--UGAAACUC)GCCUACAUGAAGACGGAAUCGCU--- Chl.Cya.ca 2400 ---AGUAAU-CGCCGG(UC--AGCCAC)ACGGCGGUGAAUUU--GUU--- Chl.Cya.ca 2450 -----------------CCCGGGCCUUGUACACACCGCCCGUCACACCAU Chl.Cya.ca 2500 GGAAGCUGA-UUGUGCCCGAAGUCGUU--uuuucu---cca(---u-aac Chl.Cya.ca 2550 aa-----)ugg-uag-uAA-GC-GCCU-AAGG-CAAAAUUAGUGACUGGG Chl.Cya.ca 2600 GUGAAGUCGUAACAAGGUAGCCGUACU(GGAA)GGUGCGGCUGGAUUACC Chl.Cya.ca 2650 UCCUUU--|~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ Chl.Cya.ca 2700 ~~~~~~~~~~~~~~~~| chl.Ant.sp 0 |~~~~~~~~~~~ACUACGGAGAG-UU(U-GA)UCCU|GGCUCAGGAUGAA chl.Ant.sp 50 CGC-UGGCGGUAUGCCU--AACACAUGCAAGUUGAACG|AA--------- chl.Ant.sp 100 --------agc(uu------------------cg------)gcu------ chl.Ant.sp 150 ----------------UU--AGU--AGCGGACGGGUGAGUAA-UACAUGA chl.Ant.sp 200 GA-AUCUGC-AUUU------------------------------------ chl.Ant.sp 250 -------------------------------------------------A chl.Ant.sp 300 GGA---------GGGGAAUAACAA------------------------UU chl.Ant.sp 350 G(GAAA)CGA-UUGCUAAUGCC-CCAU-AU-------------------- chl.Ant.sp 400 ------------------GCU-------(UUAG---)-------AGU--- chl.Ant.sp 450 ---GAAAU----------------------GA--------------(--- chl.Ant.sp 500 -------uuuu------)---------|-----UCGCCUGAAUA-UGA|G chl.Ant.sp 550 -CUCAUGC|-CUGAUUA-GCUAGUUGG-UA-GG(G-UAAAGG)-CCUACC chl.Ant.sp 600 AA|GGCGACGAU|CAGUAGCUG|GUUU(GAGA)GGAUGAUCAGC|CACAC chl.Ant.sp 650 UGGAA(CUGAGACACG)GUCCAGA-C--UUC(UA-CG)GA-A--GGCAG- chl.Ant.sp 700 CAGUGGGG-AAUUUUCCG-CAAU-GGGC-(-GAAA)-G-CU-GACGGA|G chl.Ant.sp 750 CAAUACCGCGUGAGGGAUGAAUGCC(---UAUG--)GG-UU--GUAAACC chl.Ant.sp 800 UC|UUUU-AUUAGGGAAGAAUU--------(--------)---------A chl.Ant.sp 850 UGACG|GU-ACCU-AAUGAA-UAAGCAUC|GGCU-AACU-CCGUG(CCA- chl.Ant.sp 900 -GCAGCC|GCGGU---AA-)UACGGGG|GAUGCAAGCGUUAU-CCGGAAU chl.Ant.sp 950 CAUUGGGC|GUAAAGAGUCUGUAGGUU|GCUUAAUAAG-|UCU-GCUGUU chl.Ant.sp 1000 AAAUAUUAGAGC(------------------------------------- chl.Ant.sp 1050 ---------------------------------UCA)ACUUUAA-GC-AA chl.Ant.sp 1100 GCAGU--AGA-AAC-U|AUU-AA-G-CUAGAG-UA|UGAUA-----GGGG chl.Ant.sp 1150 UAGAG|GGAAUUCCCAG-UGUAGCG(GUGAAA)UGCGUAGAUA---UUGG chl.Ant.sp 1200 GAAGAACACCAGA---AGC(GAAA)-C|G|CUCUA-CUG|GGCCA--U-- chl.Ant.sp 1250 -------------------------------------------------- chl.Ant.sp 1300 ----------UACUGACACU|GAG-AGACGAAAGCUAGGGGAGCAAAUGG chl.Ant.sp 1350 G(AUU-A-GAUAC)-CCCAGUAG-|UC-CUA-GCCGUAAACGAUGGAU-- chl.Ant.sp 1400 --AC|UA|GAUG-UUGCACG------------------(-------uauc chl.Ant.sp 1450 gauc-)-------------------------------------------- chl.Ant.sp 1500 |------------------------------|-CGUGCAGUAUC-GUAGC chl.Ant.sp 1550 (UAAC)GCGU-UAAGUAUCC|C|GCCUGGGAAGUACGCUC(GCAA)GAGU chl.Ant.sp 1600 GAAACUCAAAGGAAUUGACGGGGCCCC-GCACA-------AGCG-U|GGA chl.Ant.sp 1650 GCAUGUGGUUUAAUUCG-(AUGCAACA)CGAAGAACCUUACCAGAACUUG chl.Ant.sp 1700 ACA----UA|-UC-GCA--AA------UUUUUAU-----(GAG-A-)AUA chl.Ant.sp 1750 AA-AAG---UG--CU---------(UUCG------)---------AGAA- chl.Ant.sp 1800 ---------------|UGCGAAUA|C|AGGUGGUGCAUG|GCU|GUCGUC chl.Ant.sp 1850 A|-G-CUCGU|GUC(GUGA)GAUGUUGGG(UUAAGU)CCCGCAACGAGCG chl.Ant.sp 1900 CAACCCUUG|UUUUUA-U-UUGCCA-UCA--------------------- chl.Ant.sp 1950 -------------------------------------------------- chl.Ant.sp 2000 -------------------------------------------------- chl.Ant.sp 2050 -----------------------------(--uuuagu--)-------UG chl.Ant.sp 2100 |GGUACUUUAAAAAGACUGCCGGU(GACAA----)--------------- chl.Ant.sp 2150 ---------ACCGGAGGAAGGUGAGGAUGACGUC-AA--GUCAGCAUGCC chl.Ant.sp 2200 CCUUAUGUUCUGGGCUAC-ACACGUGCUACAAUGGU--UAUGACAAAAAG chl.Ant.sp 2250 UC----GCAAACUU--------------------(----GUGA-)----- chl.Ant.sp 2300 --------------AAGU-AAGCUAAUC-UUAU-AAACAUAGCCUCAGUU chl.Ant.sp 2350 CGGAUUGCAGGC(--UGAAACUC)GCCUGCAUGAAGGUGGAAUCGCU--- chl.Ant.sp 2400 ---AGUAAU-CGCCGG(UC--AGCUAU)ACGGCGGUGAAUCC--GUU--- chl.Ant.sp 2450 -----------------CCCGGGCCUUGUACACACCGCCCGUCACACCAU chl.Ant.sp 2500 GGGAGCUGG-CCAUGCCCAAAGUUGUU---ACCCU-AUCC-(---u-uuu chl.Ant.sp 2550 ua-----)--G-AGG-GGU-UC-ACCU-AAGG-UUGGGCUAGUGACUGGG chl.Ant.sp 2600 GUGAAGUCGUAACAAGGUAGCCGUACU(GGAA)GGUGCGGCUGGAUCACC chl.Ant.sp 2650 UCCUUAU-|~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ chl.Ant.sp 2700 ~~~~~~~~~~~~~~~~| chl.C.cris 0 |---------AUACAACGGAGAG-UU(U-GA)UCCU|GGCUCAGGAUGAA chl.C.cris 50 CGC-UGGCGGUAUGCCU--AACACAUGCAAGUUGAACG|AA--------- chl.C.cris 100 --------agu(ua------------------au------)gcu------ chl.C.cris 150 ----------------UU--AGU--AGCGGACGGGUGAGUAA-UACAUAA chl.C.cris 200 GA-AUCUGC-CUUG------------------------------------ chl.C.cris 250 -------------------------------------------------A chl.C.cris 300 GGA---------GGGGAAUAACAA------------------------UU chl.C.cris 350 G(GAAA)CGA-UUGCUAAUGCC-CCAU-AU-------------------- chl.C.cris 400 ------------------GCC-------(uucag--)-------aGU--- chl.C.cris 450 ---GAAAC----------------------AGA-------------(--- chl.C.cris 500 -------GAAA------)---------|----UCUGCCUUAAGA-UGA|G chl.C.cris 550 -CUUAUGC|-CUGAUUA-GCUAGUUGG-UA-AA(U-UAAAAG)-CUUACC chl.C.cris 600 AA|GGCGACGAU|CAGUAGCUG|GUUU(GAGA)GGAUGAUCAGC|CACAC chl.C.cris 650 UGGAA(CUGAGACACG)GUCCAGA-C--UUC(UA-CG)GA-A--GGCAG- chl.C.cris 700 CAGUGGGG-AAUUUUCCG-CAAU-GGGC-(-GAAA)-GC-U-GACGGA|G chl.C.cris 750 CAAUACCGCGUGAGGGAAGAAUGCC(---UGUG--)GG-UU--GUAAACC chl.C.cris 800 UC|UUUU-AUCAGGAAAGAAGU--------(--------)--------UA chl.C.cris 850 UGACG|GU-ACCU-GAUGAA-UAAGCAUC|GGCU-AACU-CCGUG(CCA- chl.C.cris 900 -GCAGCC|GCGGU---AA-)UACGGGG|GAUGCAAGUGUUAU-CCGGAAU chl.C.cris 950 CACUGGGC|GUAAAGCGUCUGUAGGUG|GUUUAGUAAG-|UCU-GUUGUU chl.C.cris 1000 AAAUAUUGGGGC(------------------------------------- chl.C.cris 1050 ---------------------------------UCA)ACCUUAA-GC-AA chl.C.cris 1100 GCAAU--GGA-AAC-U|ACU-AG-A-CUAGAG-UA|UGGUA-----UGGG chl.C.cris 1150 UAAAG|GGAAUUCCCAG-UGUAGCG(GUGAAA)UGCGUAGAUA---UUGG chl.C.cris 1200 GAAGAACACCAGC---AGC(GAAA)-C|G|CUUUA-CUA|GGCUA--U-- chl.C.cris 1250 -------------------------------------------------- chl.C.cris 1300 ----------CACUGACACU|CAG-AGACGAAAGCUAGGGUAGCGAAUGG chl.C.cris 1350 G(AUU-A-GAUAC)-CCCAGUAG-|UC-CUA-GCUGUAAACGAUGGAU-- chl.C.cris 1400 --AC|UA|GAUG-UUGCGCG------------------(-------uauc chl.C.cris 1450 gauc-)-------------------------------------------- chl.C.cris 1500 |------------------------------|-CGUGCAGUAUC-GUAGC chl.C.cris 1550 (UAAC)GCGU-UAAGUAUCC|C|GCCUGGGAAGUACGCUC(GCAA)GGAU chl.C.cris 1600 GAAACUCAAAGGAAUUGACGGGGGCCC-GCACA-------AGCGGU|GGA chl.C.cris 1650 GCAUGUGGUUUAAUUCG-(AUGCAACA)CGAAGAACCUUACCAGUGCGUG chl.C.cris 1700 ACA----UG|-UC-ACG--AA------UUUUUAC-----(GAA-A-)UUA chl.C.cris 1750 AA-AG----UG--CC---------(UUCG------)---------GGAA- chl.C.cris 1800 ---------------|CGUGAACA|C|AGGUGGUGCAUG|GCU|GUCGUC chl.C.cris 1850 A|-G-CUCGU|GUC(GUGA)GAUGUUGGG(UUAAGU)CCCGCAACGAGCG chl.C.cris 1900 CAACCCUUG|UUUUUA-G-UUGCCA-UCA--------------------- chl.C.cris 1950 -------------------------------------------------- chl.C.cris 2000 -------------------------------------------------- chl.C.cris 2050 -----------------------------(--uuuagu--)-------UG chl.C.cris 2100 |GGCACUCUAAAGAGACUGCCGGU(GACAA----)--------------- chl.C.cris 2150 ---------GCCGGAGGAAGGUAAGGAUGACGUC-AA--GUCAGCAUGCC chl.C.cris 2200 CCUUAAGCUCUGGGCUAC-ACACGUGCUACAAUGGU--UGUGACAAAGAG chl.C.cris 2250 UC----GCAAAUCU--------------------(----GUGA-)----- chl.C.cris 2300 --------------AGAU-AAGCUAAUC-UCAU-AAACGCAGCCUCAGUU chl.C.cris 2350 CGGAUUGUAGGC(--UGAAACUC)GCCUACAUGAAGGUGGAAUCGCU--- chl.C.cris 2400 ---AGUAAU-CGCCGG(UC--AGCUAU)ACGGCGGUGAAUCC--GUU--- chl.C.cris 2450 -----------------CCCGGGCCUUGUACACACCGCCCGUCACACCAU chl.C.cris 2500 GGAAGCUGG-CUAUACCCGAAGUCGUU---ACUCC-AACC-(--uu-uau chl.C.cris 2550 gga----)-GG-AGG-GCG-CC-UAAG-G----UAGAGCUAGUGACUGGG chl.C.cris 2600 GUGAAGUCGUAACAAGGUAGCCGUACU(GGAA)GGUGCGGCUGGAUCACC chl.C.cris 2650 UCCUUA--|~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ chl.C.cris 2700 ~~~~~~~~~~~~~~~~| chl.P.palm 0 |---------ACACCAUGGAGAG-UU(U-GA)UCCU|GGCUCAGGAUGAA chl.P.palm 50 CGC-UGGCGGUAUGCUU--AACACAUGCAAGUCGAACG|AA--------- chl.P.palm 100 --------ggu(uu------------------u-------)acc------ chl.P.palm 150 ----------------UU--AGU--GGCGGACGGGUGAGUAA-CACGUGA chl.P.palm 200 GA-AUCUAC-CCUU------------------------------------ chl.P.palm 250 -------------------------------------------------G chl.P.palm 300 GGA---------GGGGAAUAACAG------------------------UU chl.P.palm 350 G(GAAA)CGA-UUGCUAAUGCC-CCAU-Aa-------------------- chl.P.palm 400 ------------------GCU-------(GAAA---)-------AGU--- chl.P.palm 450 ---AAAAu----------------------GA--------------(--- chl.P.palm 500 -------uuuu------)---------|-----UCGCCCAGGGA-UGA|G chl.P.palm 550 -CUCGCGC|-CUGAUUA-GCUAGUUGG-UA-AG(A-UAAAAG)-CUUACC chl.P.palm 600 AA|GGCAACGAU|CAGUAGCUG|GUUU(GAGA)GGACGAUCAGC|CACAC chl.P.palm 650 UGGGA(CUGAGACACG)GCCCAGA-C--UUC(UA-CG)GG-A--GGCAG- chl.P.palm 700 CAGUGGGG-AAUUUUCCG-CAAU-GGGC-(-GAAA)-GC-U-GACGGA|G chl.P.palm 750 CAAUACCGCGUGAGGGAAGAAUGCC(---CGUG--)CG-UU--GUAAACC chl.P.palm 800 UC|UUUU-CUUAGGGAAGAAGC--------(--------)--------UC chl.P.palm 850 UGACG|GU-ACCU-AAAGAA-UAAGCAUC|GGCU-AACU-CCGUG(CCA- chl.P.palm 900 -GCAGCC|GCGGU---AA-)UACGGAG|GAUGCAAGCGUUAU-CCGGAAU chl.P.palm 950 CACUGGGC|GUAAAGUGU-AGUAGGUG|GCUUAUAAAG-|UCC-GCUGUU chl.P.palm 1000 AAAUCUUAGGGC(------------------------------------- chl.P.palm 1050 ---------------------------------UCA)ACCCUAA-GC-CA chl.P.palm 1100 GCAGU--AGA-AAC-U|UCU-AG-G-CUAGAG-UA|UGGUA-----GGGG chl.P.palm 1150 CAGAG|GGAAUUCCCAG-UGUAGCG(GUGAAA)UGCGUAGAUA---UUGG chl.P.palm 1200 GAAGAACACCAGA---GGC(GAAA)GC|G|CUCUG-CUA|GGCCA--U-- chl.P.palm 1250 -------------------------------------------------- chl.P.palm 1300 ----------UACUGACACU|CAG-AGACGAAAGCUAGGGGAGCAAAUGG chl.P.palm 1350 G(AUU-A-GAUAC)-CCCAGUAG-|UC-CUA-GCCGUAAACGAUGGAU-- chl.P.palm 1400 --AC|UA|GAUG-UUGCGCG------------------(-------uauc chl.P.palm 1450 gauc-)-------------------------------------------- chl.P.palm 1500 |------------------------------|-CGUGCAGUAUC-GUAGC chl.P.palm 1550 (UAAC)GCGU-UAAGUAUCC|C|GCCUGGGGAGUAUGCUC(GCAA)GAGU chl.P.palm 1600 GAAACUCAAAGGAAUUGACGGGGGCCC-GCACA-------AGCG-U|GGA chl.P.palm 1650 GCAUGUGGUUUAAUUCG-(AUGCAACG)CGAAGAACCUUACCAGAGCUUG chl.P.palm 1700 ACA----UG|-UC-ACG--AA------UUUUUUC-----(GAG-A-)GAA chl.P.palm 1750 AA-AAG---UG--CC---------(UUAG------)---------GGAA- chl.P.palm 1800 ---------------|CGUGAACA|C|AGGUGGUGCAUG|GCU|GUCGUC chl.P.palm 1850 A|-G-CUCGU|GUC(GUGA)GAUGUUGGG(UUAAGU)CCCGCAACGAGCG chl.P.palm 1900 CAACCCUUG|UCUUUA-G-UUGCCA-UCA--------------------- chl.P.palm 1950 -------------------------------------------------- chl.P.palm 2000 -------------------------------------------------- chl.P.palm 2050 -----------------------------(--uuuagu--)-------UG chl.P.palm 2100 |GGCACUCUAGAGAGACUGCCGGU(GACAA----)--------------- chl.P.palm 2150 ---------ACCGGAGGAAGGUAAGGAUGACGUC-AA--GUCAGCAUGCC chl.P.palm 2200 CCUUACGCUCUGGGCUAC-ACACGUGCUACAAUGGU--CGCGACAAAGAG chl.P.palm 2250 UU----GCCAGUCU--------------------(----GCAA-)----- chl.P.palm 2300 --------------AGAC-GCGCUAAUC-UCAU-AAACGUGGCCUCAGUU chl.P.palm 2350 CGGAUUGUAGGC(--UGAAACUC)GCCUACAUGAAGGUGGAAUCGCU--- chl.P.palm 2400 ---AGUAAU-CGCCGG(UC--AGCUAC)ACGGCGGUGAAUCC--GUU--- chl.P.palm 2450 -----------------CCCGGGCCUUGUACACACCGCCCGUCACACCAC chl.P.palm 2500 GGAAGCUGG-CCACGCCCAAAGUCGUU---ACCCU-AACC-(-----uuu chl.P.palm 2550 u------)-GG-AGG-GGG-GC-GCCU-AAGG-CAGGGCUAGUGACUGGG chl.P.palm 2600 GUGAAGUCGUAACAAGGUAGCCGUACU(GGAA)GGUGCGGCUGGAUCACC chl.P.palm 2650 UCCUUU--|~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ chl.P.palm 2700 ~~~~~~~~~~~~~~~~| (3)-Viridi 0 | (3)-Viridi 23 - (3)-Viridi 85 -- (3)-Viridi 88 - (3)-Viridi 103 --------------------------------------------- (3)-Viridi 148 - (3)-Viridi 156 --------- (3)-Viridi 173 -- (3)-Viridi 178 ------------------- (3)-Viridi 297 -- (3)-Viridi 303 --------- (3)-Viridi 316 -------- (3)-Viridi 324 --------- (3)-Viridi 345 --- (3)-Viridi 354 -- (3)-Viridi 360 - (3)-Viridi 371 - (3)-Viridi 375 - (3)-Viridi 378 - (3)-Viridi 380 --------------------------- (3)-Viridi 412 - (3)-Viridi 422 ---- (3)-Viridi 426 -- (3)-Viridi 438 ------ (3)-Viridi 462 ------------------ (3)-Viridi 491 - (3)-Viridi 494 - (3)-Viridi 499 - (3)-Viridi 507 -- (3)-Viridi 538 - (3)-Viridi 544 - (3)-Viridi 550 - (3)-Viridi 569 -- (3)-Viridi 581 - (3)-Viridi 585 - (3)-Viridi 606 ----- (3)-Viridi 612 - (3)-Viridi 618 | (3)-Viridi 633 | (3)-Viridi 639 | (3)-Viridi 643 -- (3)-Viridi 666 - (3)-Viridi 677 - (3)-Viridi 680 | (3)-Viridi 684 - (3)-Viridi 690 - (3)-Viridi 692 -- (3)-Viridi 698 --- (3)-Viridi 715 - (3)-Viridi 718 - (3)-Viridi 730 - (3)-Viridi 734 -------------------------------------- (3)-Viridi 772 ---------------------- (3)-Viridi 805 ------- (3)-Viridi 822 - (3)-Viridi 828 - (3)-Viridi 830 | (3)-Viridi 833 ----- (3)-Viridi 841 ------------- (3)-Viridi 854 -- (3)-Viridi 866 - (3)-Viridi 889 - (3)-Viridi 899 --- (3)-Viridi 907 - (3)-Viridi 913 --- (3)-Viridi 918 -| (3)-Viridi 926 | (3)-Viridi 931 - (3)-Viridi 942 - (3)-Viridi 958 | (3)-Viridi 988 - (3)-Viridi 990 | (3)-Viridi 993 - (3)-Viridi 1074 --------- (3)-Viridi 1086 - (3)-Viridi 1089 - (3)-Viridi 1097 - (3)-Viridi 1099 | (3)-Viridi 1105 --- (3)-Viridi 1116 - (3)-Viridi 1120 - (3)-Viridi 1123 - (3)-Viridi 1125 ---- (3)-Viridi 1131 |- (3)-Viridi 1142 ---- (3)-Viridi 1164 - (3)-Viridi 1165 ------ (3)-Viridi 1177 - (3)-Viridi 1183 -------------------------------------|----- (3)-Viridi 1226 -------------- (3)-Viridi 1243 - (3)-Viridi 1245 -- (3)-Viridi 1299 ----------- (3)-Viridi 1314 - (3)-Viridi 1320 - (3)-Viridi 1325 | (3)-Viridi 1355 - (3)-Viridi 1361 ------- (3)-Viridi 1371 | (3)-Viridi 1373 -- (3)-Viridi 1383 - (3)-Viridi 1387 - (3)-Viridi 1398 ---- (3)-Viridi 1404 - (3)-Viridi 1412 - (3)-Viridi 1415 - (3)-Viridi 1421 - (3)-Viridi 1427 --------------------- (3)-Viridi 1452 --- (3)-Viridi 1464 -- (3)-Viridi 1467 -- (3)-Viridi 1474 ---- (3)-Viridi 1479 -- (3)-Viridi 1483 -- (3)-Viridi 1487 ------------ (3)-Viridi 1499 --------------------------------- (3)-Viridi 1536 ------------ (3)-Viridi 1560 - (3)-Viridi 1565 | (3)-Viridi 1572 | (3)-Viridi 1575 - (3)-Viridi 1595 - (3)-Viridi 1626 - (3)-Viridi 1646 - (3)-Viridi 1675 ------ (3)-Viridi 1682 ------- (3)-Viridi 1704 --- (3)-Viridi 1709 | (3)-Viridi 1713 - (3)-Viridi 1721 ------ (3)-Viridi 1736 --- (3)-Viridi 1743 - (3)-Viridi 1752 - (3)-Viridi 1767 ------- (3)-Viridi 1777 --------- (3)-Viridi 1787 --- (3)-Viridi 1790 ----- (3)-Viridi 1802 ------------- (3)-Viridi 1821 -- (3)-Viridi 1824 | (3)-Viridi 1832 --- (3)-Viridi 1842 ---------- (3)-Viridi 1865 -- (3)-Viridi 1868 -- (3)-Viridi 1871 -- (3)-Viridi 1883 ---------- (3)-Viridi 1893 ------ (3)-Viridi 1901 - (3)-Viridi 1916 - (3)-Viridi 1924 - (3)-Viridi 1937 - (3)-Viridi 1939 -- (3)-Viridi 1959 -------------------------------------- (3)-Viridi 1997 -------------------------------------------------- (3)-Viridi 2047 -------------------------------- (3)-Viridi 2087 --- (3)-Viridi 2093 -- (3)-Viridi 2114 ||| (3)-Viridi 2130 ---- (3)-Viridi 2136 ------ (3)-Viridi 2142 - (3)-Viridi 2153 ------ (3)-Viridi 2187 -- (3)-Viridi 2218 - (3)-Viridi 2237 - (3)-Viridi 2253 --- (3)-Viridi 2264 -------------------- (3)-Viridi 2285 ---- (3)-Viridi 2293 - (3)-Viridi 2328 - (3)-Viridi 2363 -- (3)-Viridi 2397 ------ (3)-Viridi 2420 - (3)-Viridi 2443 - (3)-Viridi 2448 ------------------- (3)-Viridi 2527 --- (3)-Viridi 2561 - (3)-Viridi 2577 - (3)-Viridi 2582 - (3)-Viridi 2657 - (3)-Viridi 2716 | (4)-Chloro 0 | (4)-Chloro 23 - (4)-Chloro 85 -- (4)-Chloro 88 - (4)-Chloro 103 --------------------------------------------- (4)-Chloro 148 - (4)-Chloro 156 --------- (4)-Chloro 173 -- (4)-Chloro 178 ------------------- (4)-Chloro 297 -- (4)-Chloro 303 --------- (4)-Chloro 316 -------- (4)-Chloro 324 --------- (4)-Chloro 345 --- (4)-Chloro 354 -- (4)-Chloro 360 - (4)-Chloro 371 - (4)-Chloro 375 - (4)-Chloro 378 - (4)-Chloro 380 --------------------------- (4)-Chloro 412 - (4)-Chloro 422 ---- (4)-Chloro 426 -- (4)-Chloro 438 ------ (4)-Chloro 462 ------------------ (4)-Chloro 491 - (4)-Chloro 494 - (4)-Chloro 499 - (4)-Chloro 507 -- (4)-Chloro 538 - (4)-Chloro 544 - (4)-Chloro 550 - (4)-Chloro 569 -- (4)-Chloro 581 - (4)-Chloro 585 - (4)-Chloro 606 ----- (4)-Chloro 612 - (4)-Chloro 618 | (4)-Chloro 633 | (4)-Chloro 639 | (4)-Chloro 643 -- (4)-Chloro 666 - (4)-Chloro 677 - (4)-Chloro 680 | (4)-Chloro 684 - (4)-Chloro 690 - (4)-Chloro 692 -- (4)-Chloro 698 --- (4)-Chloro 715 - (4)-Chloro 718 - (4)-Chloro 730 - (4)-Chloro 734 -------------------------------------- (4)-Chloro 772 ---------------------- (4)-Chloro 805 ------- (4)-Chloro 822 - (4)-Chloro 828 - (4)-Chloro 830 | (4)-Chloro 833 ----- (4)-Chloro 841 ------------- (4)-Chloro 854 -- (4)-Chloro 866 - (4)-Chloro 889 - (4)-Chloro 899 --- (4)-Chloro 907 - (4)-Chloro 913 --- (4)-Chloro 918 -| (4)-Chloro 926 | (4)-Chloro 931 - (4)-Chloro 942 - (4)-Chloro 958 | (4)-Chloro 988 - (4)-Chloro 990 | (4)-Chloro 993 - (4)-Chloro 1074 --------- (4)-Chloro 1086 - (4)-Chloro 1089 - (4)-Chloro 1097 - (4)-Chloro 1099 | (4)-Chloro 1105 --- (4)-Chloro 1116 - (4)-Chloro 1120 - (4)-Chloro 1123 - (4)-Chloro 1125 ---- (4)-Chloro 1131 |- (4)-Chloro 1142 ---- (4)-Chloro 1164 - (4)-Chloro 1165 ------ (4)-Chloro 1177 - (4)-Chloro 1183 -------------------------------------|----- (4)-Chloro 1226 -------------- (4)-Chloro 1243 - (4)-Chloro 1245 -- (4)-Chloro 1299 ----------- (4)-Chloro 1314 - (4)-Chloro 1320 - (4)-Chloro 1325 | (4)-Chloro 1355 - (4)-Chloro 1361 ------- (4)-Chloro 1371 | (4)-Chloro 1373 -- (4)-Chloro 1383 - (4)-Chloro 1387 - (4)-Chloro 1398 ---- (4)-Chloro 1404 - (4)-Chloro 1412 - (4)-Chloro 1415 - (4)-Chloro 1421 - (4)-Chloro 1427 --------------------- (4)-Chloro 1452 --- (4)-Chloro 1464 -- (4)-Chloro 1467 -- (4)-Chloro 1474 ---- (4)-Chloro 1479 -- (4)-Chloro 1483 -- (4)-Chloro 1487 ------------ (4)-Chloro 1499 --------------------------------- (4)-Chloro 1536 ------------ (4)-Chloro 1560 - (4)-Chloro 1565 | (4)-Chloro 1572 | (4)-Chloro 1575 - (4)-Chloro 1595 - (4)-Chloro 1626 - (4)-Chloro 1646 - (4)-Chloro 1675 ------ (4)-Chloro 1682 ------- (4)-Chloro 1704 --- (4)-Chloro 1709 | (4)-Chloro 1713 - (4)-Chloro 1721 ------ (4)-Chloro 1736 --- (4)-Chloro 1743 - (4)-Chloro 1752 - (4)-Chloro 1767 ------- (4)-Chloro 1777 --------- (4)-Chloro 1787 --- (4)-Chloro 1790 ----- (4)-Chloro 1802 ------------- (4)-Chloro 1821 -- (4)-Chloro 1824 | (4)-Chloro 1832 --- (4)-Chloro 1842 ---------- (4)-Chloro 1865 -- (4)-Chloro 1868 -- (4)-Chloro 1871 -- (4)-Chloro 1883 ---------- (4)-Chloro 1893 ------ (4)-Chloro 1901 - (4)-Chloro 1916 - (4)-Chloro 1924 - (4)-Chloro 1937 - (4)-Chloro 1939 -- (4)-Chloro 1959 -------------------------------------- (4)-Chloro 1997 -------------------------------------------------- (4)-Chloro 2047 -------------------------------- (4)-Chloro 2087 --- (4)-Chloro 2093 -- (4)-Chloro 2114 ||| (4)-Chloro 2130 ---- (4)-Chloro 2136 ------ (4)-Chloro 2142 - (4)-Chloro 2153 ------ (4)-Chloro 2187 -- (4)-Chloro 2218 - (4)-Chloro 2237 - (4)-Chloro 2253 --- (4)-Chloro 2264 -------------------- (4)-Chloro 2285 ---- (4)-Chloro 2293 - (4)-Chloro 2328 - (4)-Chloro 2363 -- (4)-Chloro 2397 ------ (4)-Chloro 2420 - (4)-Chloro 2443 - (4)-Chloro 2448 ------------------- (4)-Chloro 2527 --- (4)-Chloro 2561 - (4)-Chloro 2577 - (4)-Chloro 2582 - (4)-Chloro 2657 - (4)-Chloro 2716 | chl.C.elli 0 |~~~~~~~~~~UUUCAUGGAGAG-UU(UCGA)UCCU|GGCUCAGGAUGAA chl.C.elli 50 CGC-UGGCGGCAUGCUU--AACACAUGCAAGUCGAACG|GA---gguuug chl.C.elli 100 cuu-uuuuuaa(gc------------------uuagg---)uuaaaaa-- chl.C.elli 150 -aaaguaaauuc----UU--AGU--GGCGGACGGGUGAGUAA-CGCGUAA chl.C.elli 200 GA-ACCUAC-CUUU------------------------------------ chl.C.elli 250 -------------------------------------------------A chl.C.elli 300 GGC---------GGGGGACAACAA------------------------CU chl.C.elli 350 G(GAAA)CGG-UUGCUAAUACC-CCAU-AA-------------------- chl.C.elli 400 ------------------GCU-------(GAGG---)-------AGU--- chl.C.elli 450 ---AAAA-----------------------ggaa------------(--- chl.C.elli 500 -----u-acua------)---------|---UUCUGUCUAAAGA-UGG|G chl.C.elli 550 -CUUGCGU|-CUGAUUA-GCUUGUUGG-UG-AG(G-UAAUUG)-CUUACC chl.C.elli 600 AA|GGCAACGAU|CAGUAGCUG|GUCU(GAGA)GGAUGAUCAGC|CACAC chl.C.elli 650 UGGGA(CUGAGACACG)GCCCAGA-C--UUC(UA-CG)GA-A--GGCAG- chl.C.elli 700 CAGUGAGG-AAUUUUCCG-CAAU-GGGC-(-GAAA)-GC-U-GACGGA|G chl.C.elli 750 CAAUGCCGCGUGGAGGAUGACAGCC(---UGUG--)GG-UC--GUAAACU chl.C.elli 800 CC|UUUU-CUCAGAGAAGAAGU--------(--------)--------UC chl.C.elli 850 UGACG|GU-AUCU-GAGGAA-UAAGCAUC|GGCU-AACU-CCGUG(CCA- chl.C.elli 900 -GCAGCC|GCGGU---AA-)GACGGAG|GAUGCAAGCGUUAU-CCGGAAU chl.C.elli 950 GAUUGGGC|GUAAAGCGUCUGUAGGUG|GUUUAUUAAG-|UCU-ACUGUU chl.C.elli 1000 AAAGAUCAGGGC(------------------------------------- chl.C.elli 1050 ---------------------------------UUA)ACCCUGA-GU-CG chl.C.elli 1100 GCAGU--AGA-AAC-U|AAU-GA-G-CUUGAG-UA|CGGUA-----GGGG chl.C.elli 1150 CAGAG|GGAAUUCCGGG-UGUAGCG(GUGAAA)UGCGUAGAGA---UCGG chl.C.elli 1200 GAAGAACACCAAU---GGC(GAAA)G-|A|CUCUG-CUG|GGCCG--A-- chl.C.elli 1250 -------------------------------------------------- chl.C.elli 1300 ----------AACUGACACU|CAG-AGACGAAAGCUAGGGGAGCGAAUGG chl.C.elli 1350 G(AUU-A-GAUAC)-CCCAGUAG-|UC-CUA-GCCGUAAACGAUGGAU-- chl.C.elli 1400 --AC|UA|AGUG-CUGUGCGA-----------------(--------cuc chl.C.elli 1450 aaa--)-------------------------------------------- chl.C.elli 1500 |------------------------------|ACGUCCAGUACU-GUAGC chl.C.elli 1550 (UAAC)GCGU-GAAGUAUCC|C|GCCUGGGGAGUAUGCUC(GCAA)GAGU chl.C.elli 1600 GAAACUCAAAGGAAUUGACGGGGGCCC-GCACA-------AGCGGU|GGA chl.C.elli 1650 GCAUGUGGUUUAAUUCG-(AUGCAACG)CGAAGAACCUUACCAGGGCUUG chl.C.elli 1700 ACA----UG|-CC-AUU--UA------AUCUCUU-----(GAA-A-)AAG chl.C.elli 1750 AG-AUuuugaa--acuugug----(cuuug-----)----cacaaguug- chl.C.elli 1800 ---------------|GGUGGACA|C|AGGUGGUGCAUG|GCU|GUCGUC chl.C.elli 1850 A|-G-CUCGU|GUC(GUGA)GAUGUUGGG(UUAAGU)CCCGCAACGAGCG chl.C.elli 1900 CAACCCUUG|UUUUUA-G-UUGCU-------------------------- chl.C.elli 1950 -------------------------------------------------- chl.C.elli 2000 --------------------uuuaaaauauacaauuuaaaaggaaugcga chl.C.elli 2050 agcauaacuucgcauacuuuaguauguga(----------)--------- chl.C.elli 2100 |AGGAAACUACAAAGACUGCCGGU(GAUAA----)--------------- chl.C.elli 2150 ---------GCCGGAGGAAGGUGAGGAUGACGUC-AA--GUCAGCAUGCC chl.C.elli 2200 CCUUAUGCCCUGGGCGAC-ACACGUGCUACAAUGGC--CAGGACAAUGAG chl.C.elli 2250 AU----GCUACCUC--------------------(----GCGA-)----- chl.C.elli 2300 --------------GAGC-AAGCUAACC-UCAA-AAACCUGGUCUCAGUU chl.C.elli 2350 CGGAUUGCAGGC(--UGCAACUC)GCCUGCAUGAAGUCGGAAUCGCU--- chl.C.elli 2400 ---AGUAAU-CGCUGG(UC--AGCCAU)ACAGCGGUGAAUAC--GUU--- chl.C.elli 2450 -----------------CCCGGGCCUUGUACACACCGCCCGUCACACUAC chl.C.elli 2500 CAGAGUCGG-CUUGGCCCAAAGUCGUA---ACUCU-AACC-(-----uuc chl.C.elli 2550 g------)-GG-AAG-AGA-GC-GCCU-AAGG-CAGG-CUGGUAAUGAGA chl.C.elli 2600 GUGAAGUCGUAACAAGGUAGCCGUACU(GGAA)GGUGCGGCUGGAUCACC chl.C.elli 2650 UCCUUA--|~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ chl.C.elli 2700 ~~~~~~~~~~~~~~~~| chl.C.mira 0 |---------UGCCUGCAGAGAG-UU(Y-GA)UCCU|GGCUCAGGAUGAA chl.C.mira 50 CGC-UGGCGGCAUGCUU--AACACAUGCAAGUCGAACG|GA--gauuuua chl.C.mira 100 ugu-uuuaaaa(cu------------------ug------)uuuuaaa-- chl.C.mira 150 -acauaaaauc-----UU--AGU--GGCGGACGGGUGAGGAA-CGCGUAA chl.C.mira 200 GA-ACCUAC-CUUU------------------------------------ chl.C.mira 250 -------------------------------------------------A chl.C.mira 300 GGG---------GAGGGACAACAA------------------------CU chl.C.mira 350 G(GAAA)CGG-UUGCUAAUACC-UCAU-AU-------------------- chl.C.mira 400 ------------------GCU-------(GAGG---)-------AGU--- chl.C.mira 450 ---AAAA-----------------------GGGuua-ua--aa---(--- chl.C.mira 500 ---ucu-acga------)uuu---au-|-uauUCCGCCUAAAGA-UGG|G chl.C.mira 550 -CUUGCGU|-CUGAUUA-GCUUGUUGG-UG-GG(G-UAAUUG)-CUUACC chl.C.mira 600 AA|GGCGACGAU|CAGUAGCUG|GUCU(GAGA)GGAUGAUCAGC|CACAC chl.C.mira 650 UGGGA(CUGAGACACG)GCCCAGA-C--UCC(UA-CG)GG-A--GGCAG- chl.C.mira 700 CAGURAGG-AAUUUUCCG-CAAU-GGGC-(-GAAA)-GCCU-GACGGA|G chl.C.mira 750 CAAUGCCGCGUGGAGGAUGACAGCC(---UGUG--)GG-UC--GUAAACU chl.C.mira 800 CC|UUUU-CUCAGAAAAGAAGA--------(--------)--------UC chl.C.mira 850 UGACG|GU-AUCU-GAGGAA-UAAGCAUC|GGCU-AACU-CCGUG(CCA- chl.C.mira 900 -GCAGCC|GCGGU---AA-)UACGGAG|GAUGCAAGCGUUAU-CCGGAAU chl.C.mira 950 GAUUGGGC|GUAAAGCGUCUGUAGGUG|GUUUAUUAAG-|UCU-ACUGUU chl.C.mira 1000 AAAGAUCAGGGC(------------------------------------- chl.C.mira 1050 ---------------------------------UUA)ACCCUGA-GC-CG chl.C.mira 1100 GCAGU--GGA-AAC-U|AAU-AA-G-CUUGAG-UA|CGGUA-----GGGG chl.C.mira 1150 CAGAG|GGAAUUCCCGG-UGUAGCG(GUGAAA)UGCGUAGAGA---UCGG chl.C.mira 1200 GAAGAACACCAAU---GGC(GAAA)GC|A|CUCUG-CUG|GGCCG--A-- chl.C.mira 1250 -------------------------------------------------- chl.C.mira 1300 ----------AACUGACACU|GAG-AGACGAAAGCUAGGGGAGCGAAUGG chl.C.mira 1350 G(AUU-A-GAUAC)-CCCAGUAG-|UC-CUA-GCCGUAAACGAUGGAU-- chl.C.mira 1400 --AC|UA|AGUG-CUGUGCG------------------(-------acuc chl.C.mira 1450 aaac-)-------------------------------------------- chl.C.mira 1500 |------------------------------|-CGUCCAGUACU-GUAGC chl.C.mira 1550 (UAAC)GCGU-GAAGUAUCC|C|GCCUGGGGAGUAUGCUC(GCAA)GGGU chl.C.mira 1600 GAAACUCAAAGGAAUUGACGGGGGCCC-GCACA-------AGCGGU|GGA chl.C.mira 1650 GCAUGUGGYUUAAUUCG-(AUGCAACG)CGAAGAACCUUACCAGGGCUUG chl.C.mira 1700 ACA----UG|-CC-AUU--UA------GUCUUUU-----(GAA-A-)AAA chl.C.mira 1750 AG-ACaguauu--ucuaaccauc-(uuua------)-gaugguuagauu- chl.C.mira 1800 ---------------|GGUGGACA|C|AGGUGGUGCAUG|GCU|GUCGUC chl.C.mira 1850 A|-G-CUCGU|GUC(GUGA)GAUGUUGGG(UUAAGU)CCCGCAACGAGCG chl.C.mira 1900 CAACCCUUG|UCUUUA-C-UUGCCA-U----------------------- chl.C.mira 1950 -------------------------------------------------- chl.C.mira 2000 ------uacuuuuaucagcgaaguaguuauaaaucaacuagcuugucgau chl.C.mira 2050 uuauuuaagcuuugcucguuuaguguguu(----------)--------- chl.C.mira 2100 |GGGAAAUUAGAGAGACUGCCGGU(GAGAA----)--------------- chl.C.mira 2150 ---------GCCGGRGGAAGGUGAGGAUGACGUC-AA--GUCAGCAUGCC chl.C.mira 2200 CCUUAUGCCCUGGGCGAC-ACACGUGCUACAAUGGC--CGGGACAAUGAG chl.C.mira 2250 AU----GCAACCUC--------------------(----GCGA-)----- chl.C.mira 2300 --------------GAGC-AAGCUAACC-UCAA-AAACCCGGUCUCAGUU chl.C.mira 2350 CGGAUUGCAGGC(--UGCAACUC)GCCUGCAUGAAGUCGGAAUCGCU--- chl.C.mira 2400 ---AGUAAU-CGCUGG(UC--AGCCAU)ACAGCGGUGAAUAC--GUU--- chl.C.mira 2450 -----------------CCCGGGCCUUGUACACACCGCCCGUCACACCAU chl.C.mira 2500 GGGAGCUGG-CUAUGCCCAAAGUCGUU---ACCCC-AACCu(cggc-gua chl.C.mira 2550 agcag--)aGG-AGG-GGG-AU-GCCU-AAGG-CAGAGCUAGUGACUGGG chl.C.mira 2600 GUGAAGUCGUAACAAGGUAGCCGUACU(GGAA)GGUGNGGNUGGAUCACC chl.C.mira 2650 UCCUUG--|~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ chl.C.mira 2700 ~~~~~~~~~~~~~~~~| chl.C.prot 0 |---------UGCCUGCAGAGAG-UU(Y-GA)UCCU|GGCUCAGGAUAAA chl.C.prot 50 CGC-UGGCGGCAUGCUU--AACACAUGCAAGUUGUACG|AA-------gg chl.C.prot 100 uau-uuuuucu(cu------------------cg------)ggaaaag-- chl.C.prot 150 -auauAC---------UG--AGU--GGCGGACGGGUGAGUAA-CACGUAA chl.C.prot 200 GA-ACCUAC-CUUU------------------------------------ chl.C.prot 250 -------------------------------------------------U chl.C.prot 300 GGA---------AAGGGACAACUA------------------------UU chl.C.prot 350 G(GAAA)CGA-UAGCUAAUACC-UUAU-AU-------------------- chl.C.prot 400 -------u----------GCU-------(GAGA---)-------AGU--- chl.C.prot 450 ---GAAA-----------------------AAU-------------(--- chl.C.prot 500 -------gaaa------)---------|----AUUGCCAAGAGA-UGG|G chl.C.prot 550 -CUUGCGC|-CUGAUUA-GCUAGUUGG-UG-UG(G-UAAAGG)-CAUACC chl.C.prot 600 AA|GGCAAUGAU|CAGUAGCUG|UUCU(GAGA)GGAUGAUCAGC|CACAC chl.C.prot 650 UGGGA(CUGAGACACG)GCCCAGA-C--UCC(UA-CG)GG-A--GGCAG- chl.C.prot 700 CAGUGAGG-AAUUUUCCG-CAAU-GGGC-(-GAAA)-GCCU-GACGGA|G chl.C.prot 750 CAAUGCCGCGUGAAGGAUGAAGGCC(---UAUG--)GG-UU--GUAAACU chl.C.prot 800 UC|UUUU-CUCAGAAAAGAAUU--------(--------)---------A chl.C.prot 850 UGACG|GU-AUCU-GAGGAA-UAAGCAUC|GGCU-AACU-CUGUG(CCA- chl.C.prot 900 -GCAGCC|GCGGU---AA-)GACAGAG|GAUGCAAGCGUUAU-CCGGAAU chl.C.prot 950 GAUUGGGC|GUAAAGCGUCUGUAGGUU|GUUUAAAAAG-|UAU-UCUGUC chl.C.prot 1000 AAAGAUUAGGGC(------------------------------------- chl.C.prot 1050 ---------------------------------UUA)ACCCUAG-AU-AG chl.C.prot 1100 GCAGA--AUA-AAC-U|UUU-AA-G-CUAGAG-UU|UGGUA-----GAGG chl.C.prot 1150 CAGAG|GGAAUUCCCGG-UGGAGCG(GUGAAA)UGCGUAGAUA---UCGG chl.C.prot 1200 GAGGAACACCAAA---GGC(GAAG)GC|A|CUCUG-CUG|GGCCA--A-- chl.C.prot 1250 -------------------------------------------------- chl.C.prot 1300 ----------UACUAACACU|GAG-AGACGAAAGCGAGGGGAGCAAAUGG chl.C.prot 1350 G(AUU-A-GAUAC)-CCCAGUAG-|UC-CUC-GCCGUAAACAAUGGAA-- chl.C.prot 1400 --AC|UA|GGUG-UUGGGUG-----------------u(-------auaa chl.C.prot 1450 aaau-)-------------------------------------------- chl.C.prot 1500 |------------------------------|-CAUUCAGUAUC-GUAGC chl.C.prot 1550 (UAAC)GCAU-UAAGUUUCC|C|GCCUGGGGAGUAUGCUC(GCAA)GAGU chl.C.prot 1600 GAAACUCAAAGGAAUUGACGGGAACCC-GCACA-------AUUGGU|GGG chl.C.prot 1650 GUACGUGGUUUAAUUCG-(AUGCAACG)CGARGAACCUUACCAGGAUUUG chl.C.prot 1700 ACA----UG|-UC-ACU--ug------uuucuuca----acuuacuacuu chl.C.prot 1750 aauugg---uu--uuaa----gcg(gaaa------)ca-----uuaaaa- chl.C.prot 1800 ---------------|AGUGAACA|C|AGGUGGUGCAUG|GCU|GUCGUC chl.C.prot 1850 A|-G-CUCGU|GUC(UUGA)GAUGUUGGG(UUAAGU)CCCGCAACGAGCG chl.C.prot 1900 CAACCCUUU|UUUUGA-A-UUGCUU-G----------------------- chl.C.prot 1950 -------------------------------------------------- chl.C.prot 2000 -------------------------------------------------- chl.C.prot 2050 ------gcgcuuuuaaacgcuuuuagaga(----------)--------- chl.C.prot 2100 |GGAAA-UUCAAAAUACUGCCGGU(GACAA----)--------------- chl.C.prot 2150 ---------GCCGGAGGAAGGUGAGGAUGACGUC-AA--GUCAGCAUGCC chl.C.prot 2200 CCUUAUAUCCUGGGCGAC-ACACGUGCUACAAUGGC--CGGAACAAAGAG chl.C.prot 2250 AA----GCGACCCC--------------------(----GCGA-)----- chl.C.prot 2300 --------------GGAC-AAGCUAACC-UCAA-AAAUCCGGUCUCAGUU chl.C.prot 2350 CGGAUUGCAGGC(--UGCAACUC)GCCUGCAUGAAGUUGGAAUCAAU--- chl.C.prot 2400 ---AGUAAU-CGCAGG(UC--AGCCAC)ACUGCGGUGAAUAC--GUU--- chl.C.prot 2450 -----------------UCCGGGUUUUGCACACACCGCCCGUCACACCAC chl.C.prot 2500 GGAAAUUGG-CUACGCCCGAAGUCAUU---ACUCU-AACCa(---u-cua chl.C.prot 2550 a------)uGG-AGG-GGG-AU-GCCU-AAGG-CGGGGCUAGUGACUGGG chl.C.prot 2600 GUGAAGUCGUAACAAGGUAGCCGUACU(GGAA)GGUGNGGNUGGAUCACC chl.C.prot 2650 UCCUUG--|~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ chl.C.prot 2700 ~~~~~~~~~~~~~~~~| chl.C.sa.1 0 |---------nnnnnnnnnnnnn-nn(n-nn)nnnn|nnnnCAGGUUGAA chl.C.sa.1 50 CGC-UGGCGUCAUGCUU--AACACAUGCAAGUCGAACG|AGaauuucuaa chl.C.sa.1 100 aaa-uuuaagc(uu------------------cg------)guuuaaa-- chl.C.sa.1 150 -guuuuaguucu-u--UU--AGU--GGCGGACGGGUGAGUAA-CGCGUAA chl.C.sa.1 200 GA-ACCUAC-CUUA------------------------------------ chl.C.sa.1 250 -------------------------------------------------U chl.C.sa.1 300 GGU---------GAGGGAUACCAA------------------------CU chl.C.sa.1 350 G(GAAA)CGG-UUGCUAAUACC-UCAU-AU-------------------- chl.C.sa.1 400 ------------------GCU-------(GAGA---)-------AGU--- chl.C.sa.1 450 ---AAAA-----------------------GGUGU-----------(--- chl.C.sa.1 500 --------ACU------)---------|--ACAUCGCCAUAAGA-GGG|G chl.C.sa.1 550 -CUUGCGU|-CUGAUUA-GUUAGUUGG-UG-GG(G-UAAAUG)-CUUACC chl.C.sa.1 600 AA|GACUAUGAU|CAGUAGUUG|GUCU(GAGA)GGAUGAUCAGC|CACAC chl.C.sa.1 650 UGGGA(CUGAGACACG)GCCCAGA-C--UCC(UA-CG)GG-A--GGCAG- chl.C.sa.1 700 CAGUGAGG-AAUUUUCCG-CAAU-GGGC-(-GAAA)-GCCU-GACGGA|G chl.C.sa.1 750 CAAUGUCGCGUGGAGGAAGAAGGCC(---CGUG--)GG-UC--GUAAACU chl.C.sa.1 800 CC|UUUU-GUCAAAGAAGAAAA--------(--------)--------UA chl.C.sa.1 850 UGACG|GU-AUUU-GACGAA-UAAGCAUC|GGCU-AACU-CCGUG(CCA- chl.C.sa.1 900 -GCAGCC|GCGGU---AA-)UACGGGG|GAUGCAAGCGUUAU-CCGGAAU chl.C.sa.1 950 UAUUGGGC|GUAAAGGGUCCUGAGGUG|GCUAGCCAAG-|UCU-AUUGUG chl.C.sa.1 1000 AAAUAUCAGGGC(------------------------------------- chl.C.sa.1 1050 ---------------------------------UUA)ACCCUGA-AC-AU chl.C.sa.1 1100 GCGGU--GGA-AAC-U|GGA-AA-G-CUUGAG-UA|CAGUA-----GGGG chl.C.sa.1 1150 CGGAG|GGAAUUUCCGG-UGGAGCG(GUGAAA)UGCAUAGAUA---UCGG chl.C.sa.1 1200 GAAGAACACCAAC---GGC(GAAA)GC|A|CUCCG-CUG|GGCUG--A-- chl.C.sa.1 1250 -------------------------------------------------- chl.C.sa.1 1300 ----------UACUGACACU|GAC-AGACGAAAGCUAGGGUAGCGAAAGG chl.C.sa.1 1350 G(AUU-A-GAUAC)-CCCUGUAG-|UC-CUA-GCCGUAAACGAUGGAC-- chl.C.sa.1 1400 --AC|UA|ACUA-UUGAAUGA-----------------(-------aauc chl.C.sa.1 1450 aaa--)-------------------------------------------- chl.C.sa.1 1500 |------------------------------|uCGUACAGUGGU-GAAGC chl.C.sa.1 1550 (UAAC)GCGA-UAAGUGUCC|C|GCCUGGGGAGUAUGCUC(GCAA)GGGU chl.C.sa.1 1600 GAAACUCAAAGGAAUUGACGGGGGCCC-GCACA-------AGCGGU|GGA chl.C.sa.1 1650 GCAUGUGGUUUAAUUCG-(AUGCAACG)CGAAGAACCUUACCAGGGCUUG chl.C.sa.1 1700 ACA----UU|-UU-ACU--UU------CCUUUUU-----(GAA-A-)AAA chl.C.sa.1 1750 AG-GGu-guac--uacuu------(uucg------)------aaguaga- chl.C.sa.1 1800 ---------------|GGUAUAAA|C|AGGUGGUGCAUG|GCU|GUCGUC chl.C.sa.1 1850 A|-G-CUCGU|GCC(GUGA)GGUGUCGGG(UUAAGU)CCUUUAACGAGCG chl.C.sa.1 1900 CAACCCUUG|UCUUUA-G-UUGAGU-Cugu-------------------- chl.C.sa.1 1950 -------------------------------------------------- chl.C.sa.1 2000 -------------------------------------------------- chl.C.sa.1 2050 ---------------cuuuuauaaagaua(----------)------gua chl.C.sa.1 2100 |UCCAAACUAGAGAGACUGCCGGU(GAUAA----)--------------- chl.C.sa.1 2150 ---------GCCGGAGGAAGGAGAGGAUGACGUC-AA--GUCAGCAUGCC chl.C.sa.1 2200 CCUUACGUCCUGGGCUAC-ACACGUGCUACAAUGGC--CGGGACAAAGAG chl.C.sa.1 2250 AU----GCAACCCU--------------------(----GCGA-)----- chl.C.sa.1 2300 --------------AGGU-AAGCUAACC-UCAA-AAACCCGGUCUCAGUU chl.C.sa.1 2350 CGGAUUGCAGGC(--UGCAACUC)GCCUGCAUGAAGUCGGAAUCGCU--- chl.C.sa.1 2400 ---AGUAAA-CGCUGG(UC--AGA-AU)ACAGCGUUGAAUAUU-GUU--- chl.C.sa.1 2450 -----------------CCCGGGCCUUGUACACACCGCCCGUCACAUUCG chl.C.sa.1 2500 GGGAAUUGG-GUUGGUUCGAAAUCAUU---AUCUU-AACCu(-----uuu chl.C.sa.1 2550 -------)aGG-AGA-GAG-GU-GCUU-ACAG-CCGGUCUAGUGACUCAA chl.C.sa.1 2600 AUGAAGUCGUAACAAGGUAGCCGUACU(GGAA)GGUGCnnnnnnnnnnnn chl.C.sa.1 2650 nnnnnn--|~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ chl.C.sa.1 2700 ~~~~~~~~~~~~~~~~| chl.C.sa.2 0 |---------nnnnnnnnnnnnn-nn(n-nn)nnnn|nnnnCAGGAUGAA chl.C.sa.2 50 CGC-UGGCGGCAUGCUU--AACACAUGCAAGUCGAACG|GA-gguuuaau chl.C.sa.2 100 uuu-uuuaagc(uu------------------ag------)guuuaaa-- chl.C.sa.2 150 -aaaaauuaaau-uucUU--AGU--GGCGGACGGGUGAGUAA-CGCGUAA chl.C.sa.2 200 GA-ACCUAC-CUUU------------------------------------ chl.C.sa.2 250 -------------------------------------------------A chl.C.sa.2 300 GGA---------GGGGGACAACAA------------------------CU chl.C.sa.2 350 G(GAAA)CGG-UUGCUAAUACC-CCAU-AA-------------------- chl.C.sa.2 400 ------------------GCU-------(GAGG---)-------AGU--- chl.C.sa.2 450 ---AAAA-----------------------GGAAU-----------(--- chl.C.sa.2 500 --------AGU------)---------|--AUUCUGCCUAAAGA-UGG|G chl.C.sa.2 550 -CUUGCGU|-CUGAUUA-GCUAGUUGG-UG-GG(G-UAAUUG)-CCUACC chl.C.sa.2 600 AA|GGCAACGAU|CAGUAGCUG|GUCU(GAGA)GGAUGAUCAGC|CACAC chl.C.sa.2 650 UGGGA(CUGAGACACG)GCCCAGA-C--UUC(UA-CG)GA-A--GGCAG- chl.C.sa.2 700 CAGUGAGG-AAUUUUCCG-CAAU-GGGC-(-GAAA)-GCCU-GACGGA|G chl.C.sa.2 750 CAAUGCCGCGUGGAGGAUGACAGCC(---UGUG--)GG-UC--GUAAACU chl.C.sa.2 800 CC|UUUU-CUCAGAGAAGAAGU--------(--------)--------UC chl.C.sa.2 850 UGACG|GU-AUCU-GAGGAA-UAAGCAUC|GGCU-AACU-CCGUG(CCA- chl.C.sa.2 900 -GCAGCC|GCGGU---AA-)GACGGAG|GAUGCAAGCGUUAU-CCGGAAU chl.C.sa.2 950 GAUUGGGC|GUAAAGCGUCUGUAGGUG|GUUCAUUAAG-|UCU-ACUGUU chl.C.sa.2 1000 AAAGAUCAGGGC(------------------------------------- chl.C.sa.2 1050 ---------------------------------UUA)ACCCUGA-GU-CG chl.C.sa.2 1100 GCAGU--AGA-AAC-U|AAU-GA-G-CUUGAG-UA|CGGUA-----GGGG chl.C.sa.2 1150 CAGAG|GGAAUUCCCGG-UGUAGCG(GUGAAA)UGCGUAGAGA---UCGG chl.C.sa.2 1200 GAAGAACACCAAU---GGC(GAAA)GC|A|CUCUG-CUG|GGCCG--A-- chl.C.sa.2 1250 -------------------------------------------------- chl.C.sa.2 1300 ----------AACUGACACU|CAG-AGACGAAAGCUAGGGGAGCGAAUGG chl.C.sa.2 1350 G(AUU-A-GAUAC)-CCCAGUAG-|UC-CUA-GCCGUAAACGAUGGAU-- chl.C.sa.2 1400 --AC|UA|AGUG-CUGUGCG------------------(-------acuc chl.C.sa.2 1450 aaaa-)-------------------------------------------- chl.C.sa.2 1500 |------------------------------|-CGUCCAGUACU-GUAGC chl.C.sa.2 1550 (UAAC)GCGU-GAAGUAUCC|C|GCCUGGGGAGUAUGCUC(GCAA)GAGU chl.C.sa.2 1600 GAAACUCAAAGGAAUUGACGGGGGCCC-GCACA-------AGCGGU|GGA chl.C.sa.2 1650 GCAUGUGGUUUAAUUCG-(AUGCAACG)CGAAGAACCUUACCAGGGCUUG chl.C.sa.2 1700 ACA----UG|-CC-AUU--U-------AACUCU------(GAA-A-)AAG chl.C.sa.2 1750 AGGUUu---ua--cuagaaccc--(uuuu------)--ggguuuuuaga- chl.C.sa.2 1800 ---------------|GGUGGACA|C|AGGUGGUGCAUG|GCU|GUCGUC chl.C.sa.2 1850 A|-G-CUCGU|GUC(GUGA)GAUGUUGGG(UUAAGU)CCCGCAACGAGCG chl.C.sa.2 1900 CAACCCUUG|UUUUUA-G-UUGCUU-U---cuaaguagaaauaaccucag chl.C.sa.2 1950 cuuuaucacgucgcuugauuacucuuuggucuuuaccuacacggcccuug chl.C.sa.2 2000 cucauuagcccuugcuaaugaguaaagccuuugguaaagacgcagaagac chl.C.sa.2 2050 uuuuuuucugcguacgcuacgauauguca(----------)--------- chl.C.sa.2 2100 |AGGAAACUAGAAAGACUGCCGGU(GAUAA----)--------------- chl.C.sa.2 2150 ---------GCCGGAGGAAGGUGAGGAUGACGUC-AA--GUCAGCAUGCC chl.C.sa.2 2200 CCUUAUGCCCUGGGCGAC-ACACGUGCUACAAUGGU--UAGGACAAUGAG chl.C.sa.2 2250 AU----GCUACCUC--------------------(----GCGA-)----- chl.C.sa.2 2300 --------------GAGC-AAGCUAACC-UCAA-AAACCUAAUCUCAGUU chl.C.sa.2 2350 CGGAUUGCAGGC(--UGCAACUC)GCCUGCAUGAAGUUGGAAUCGCU--- chl.C.sa.2 2400 ---AGUAAU-CGCUGG(UC--AGCCAU)ACAGCGGUGAAUAC--GUU--- chl.C.sa.2 2450 -----------------CCCGGGCCUUGUACACACCGCCCGUCACACCAG chl.C.sa.2 2500 AGUAGUUGG-CUUGGCCCAAAGUCGUA---ACUCU-AACC-(---c-gca chl.C.sa.2 2550 a------)-GG-GCG-AGA-GC-GGCU-AAGG-CAGGGCUGGUAAUGAGA chl.C.sa.2 2600 GUGAAGUCGUAACAAGGUAGCCGUACU(GGAA)GGUGCnnnnnnnnnnnn chl.C.sa.2 2650 nnnnnn--|~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ chl.C.sa.2 2700 ~~~~~~~~~~~~~~~~| chl.C.soro 0 |---------UGCCUGCAGAGAG-UU(Y-GA)UCCU|GGCUCAGGAUGAA chl.C.soro 50 CGC-UGGCGGCAUGCUU--AACACAUGCAAGUCGUACG|AA--------- chl.C.soro 100 ugc-aaugagg(cu------------------ug------)cuucauu-- chl.C.soro 150 -guaa-----------UG--AGU--GGCGGACGGGUGAGUAA-CACGUAA chl.C.soro 200 GA-ACCUAC-CUUU------------------------------------ chl.C.soro 250 -------------------------------------------------U chl.C.soro 300 GGA---------GAGGGACAACCA------------------------UU chl.C.soro 350 G(GAAA)CGA-UGGCUAAUACC-UCGU-AU-------------------- chl.C.soro 400 -------U----------GCU-------(GAGA---)-------AGU--- chl.C.soro 450 ---GAAA-----------------------GAU-------------(--- chl.C.soro 500 -------GAAA------)---------|----AUCGCCAAGAGA-UGG|G chl.C.soro 550 -CUUGCGG|-CUGAUUA-GCUUGUUGG-UG-AG(G-UAAUGG)-CUUACC chl.C.soro 600 AA|GGCAAUGAU|CAGUAGCUG|GUCU(GAGA)GGAUGAUCAGC|CACAC chl.C.soro 650 UGGGA(CUGAGACACG)GCCCAGA-C--UCC(UA-CG)GG-A--GGCAG- chl.C.soro 700 CAGUGAGG-AAUUUUCCG-CAAU-GGGC-(-GAAA)-GCCU-GACGGA|G chl.C.soro 750 CAAUGCCGCGUGAAGGAUGAAGGCC(---UAUG--)GG-UU--GUAAACU chl.C.soro 800 UC|UUUU-CUCAGAGAAGAAUU--------(--------)---------U chl.C.soro 850 UGACG|GU-AUCU-GAGGAA-UAAGCAUC|GGCU-AACU-CUGUG(CCA- chl.C.soro 900 -GCAGCC|GCGGU---AA-)GACAGAG|GAUGCAAGCGUUAU-CCGGAAU chl.C.soro 950 GAUUGGGC|GUAAAGCGUCUGUAGGUG|GCUUCAAAAG-|UCU-CCUGUC chl.C.soro 1000 AAAGAUCAGGGC(------------------------------------- chl.C.soro 1050 ---------------------------------UUA)ACCCUGG-GC-CG chl.C.soro 1100 GCAGG--AGA-AAC-U|CUG-AG-G-CUAGAG-UU|UGGUA-----GGGG chl.C.soro 1150 CAGAG|GGAAUUCCCGG-UGGAGCG(GUGAAA)UGCGUAGAGM---UCGG chl.C.soro 1200 GAGGAACACCAAA---GGC(GAAA)GC|A|CUCUG-CUG|GGCCA--U-- chl.C.soro 1250 -------------------------------------------------- chl.C.soro 1300 ----------AACUGACACU|GAG-AGACGAAAGCGAGGGGAGCAAAAGG chl.C.soro 1350 G(AUU-A-GAUAC)-CCCUGUAG-|UC-CUC-GCCGUAAACGAUGGAU-- chl.C.soro 1400 --AC|UA|GAUG-UUGGAUA------------------(-------gguu chl.C.soro 1450 aaag-)-------------------------------------------- chl.C.soro 1500 |------------------------------|-CAUUCAGUAUC-GGAGC chl.C.soro 1550 (UAAC)GCGU-GAAGUAUCC|C|GCCUGGGGAGUAUGCUC(GCAA)GAGU chl.C.soro 1600 GAAACUCAAAGGAAUUGACGGGGGCCC-GCACA-------AGCGGU|GGA chl.C.soro 1650 GCAUGUGGUUUAAUUCG-(AUGCAACG)CGAAGAACCUUACCAGGACUUG chl.C.soro 1700 ACA----UG|-CC-ACU--U-------UUUCCCU-----(GAA-A-)GGG chl.C.soro 1750 GA-AGu------------------(uccag-----)-------------- chl.C.soro 1800 ---------------|AGUGGRCA|C|AGGUGGUGCAUG|GCU|GUCGUC chl.C.soro 1850 A|-G-CUCGU|GUC(UUGA)GAUGUUGGG(UUAAGU)CCCGCAACGAGCG chl.C.soro 1900 CAACCCUUG|UUUUGA-A-UUGCC-------------------------- chl.C.soro 1950 -------------------------------------------------- chl.C.soro 2000 -------------------------------------------------- chl.C.soro 2050 -----------------------------(--aguuau--)--------- chl.C.soro 2100 |GGGAAAUUCAAAAGACUGCCGGU(GACAA----)--------------- chl.C.soro 2150 ---------GCCGGAGGAAGGUGAGGAUGACGUC-AA--GUCAGCAUGCC chl.C.soro 2200 CCUUACGUCCUGGGCGAC-ACACGUGCUACAAUGGC--CGGGACAAAGAG chl.C.soro 2250 AU----GCAAACCC--------------------(----GCGA-)----- chl.C.soro 2300 --------------GGGC-UAGCCAACC-UCAA-AAACCCGGUCUCAGUU chl.C.soro 2350 CGGAUUGCAGGC(--UGCAACUC)GCCUGCAUGAAGUCGGAAUCGCU--- chl.C.soro 2400 ---AGUAAU-CGCAGG(UC--AGCCAU)ACUGCGGUGAAUAC--GUU--- chl.C.soro 2450 -----------------CCCGGGCCUUGUACACACCGCCCGUCACACCAU chl.C.soro 2500 GGGAGCUGG-CUAUGCCCAAAGUCGUU---ACUCC-AACCC(-----uug chl.C.soro 2550 u------)-GG-AGG-GGG-AC-GCCU-AAGG-CAGGGCUAGUGACUGGG chl.C.soro 2600 GUGAAGUCGUAACAAGGUAGCCGUACU(GGAA)GGUGNGGNUGGAUCACC chl.C.soro 2650 UCCUUG--|~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ chl.C.soro 2700 ~~~~~~~~~~~~~~~~| chl.C.vu.1 0 |---------UGCCUGCAGAGAG-UU(Y-GA)UCCU|GGCUCAGGAUGAA chl.C.vu.1 50 CGC-UGGCGGCAUGCUU--AACACAUGCAAGUCGUACG|CA--------- chl.C.vu.1 100 ugc-aauuugg(cu------------------ug------)ccagauu-- chl.C.vu.1 150 -gcga-----------UG--AGU--GGCGGACGGGUGAGUAA-CACGUAA chl.C.vu.1 200 GA-ACCUAC-CUUU------------------------------------ chl.C.vu.1 250 -------------------------------------------------U chl.C.vu.1 300 GGA---------GAGGGAUAACCA------------------------UU chl.C.vu.1 350 G(GAAA)CGA-UGGCUAAUACC-UCGU-AU-------------------- chl.C.vu.1 400 -------u----------GCU-------(GAGA---)-------AGU--- chl.C.vu.1 450 ---GAAA-----------------------gau-------------(--- chl.C.vu.1 500 -------gaaa------)---------|----AUCGCCAAUAGA-UGG|G chl.C.vu.1 550 -CUUGCGG|-CUGAUUA-GCUUGUUGG-UG-AG(G-UAAUGG)-CUUACC chl.C.vu.1 600 AA|GGCAAUGAU|CAGUAGCUG|GUCU(GAGA)GGAUGAUCAGC|CACAC chl.C.vu.1 650 UGGGA(CUGAGACACG)GCCCAGA-C--UCC(UA-CG)GG-A--GGCAG- chl.C.vu.1 700 CAGUGAGG-AAUUUUCCG-CAAU-GGGC-(-GACA)-GCCU-GACGGA|G chl.C.vu.1 750 CAAUGCCGCGUGAAGGAUGAAGGCC(---UAUG--)GG-UU--GUAAACU chl.C.vu.1 800 UC|UUUU-CUCAGAGAAGAAGC--------(--------)--------aU chl.C.vu.1 850 UGACG|GU-AUCU-GAGGAA-UAAGCAUC|GGCU-AACU-CUGUG(CCA- chl.C.vu.1 900 -GCAGCC|GCGGU---AA-)GACAGAG|GAUGCAAGCGUUAU-CCGGAAU chl.C.vu.1 950 GAUUGGGC|GUAAAGCGUCUGUAGGUG|GCUUAAAAAG-|UCU-CCUGUC chl.C.vu.1 1000 AAAGAUCAGGGC(------------------------------------- chl.C.vu.1 1050 ---------------------------------UUA)ACCCUGG-GC-CG chl.C.vu.1 1100 GCAGG--AGA-AAC-U|CUU-AG-G-CUAGAG-UU|UGGUA-----GGGG chl.C.vu.1 1150 CAGAG|GGAAUUCCCGG-UGGAGCG(GUGAAA)UGCGUAGAGA---UCGG chl.C.vu.1 1200 GAGGAACACCAAA---GGC(GAAA)GC|A|CUCUG-CUG|GGCCA--U-- chl.C.vu.1 1250 -------------------------------------------------- chl.C.vu.1 1300 ----------AACUGACACU|GAG-AGACGAAAGCGAGGGGAGCAAAAGG chl.C.vu.1 1350 G(AUU-A-GAUAC)-CCCUGUAG-|UC-CUC-GCCGUAAACGAUGGAU-- chl.C.vu.1 1400 --AC|UA|GAUG-UUGGGUAG-----------------(-------guua chl.C.vu.1 1450 aa---)-------------------------------------------- chl.C.vu.1 1500 |------------------------------|UCACUCAGUAUC-GUAGC chl.C.vu.1 1550 (UAAC)GCGU-GAAGUAUCC|C|GCCUGGGGAGUAUGCUC(GCAA)GAGU chl.C.vu.1 1600 GAAACUCAAAGGAAUUGACGGGGGCCC-GCACA-------AGCGGU|GGA chl.C.vu.1 1650 GCAUGUGGUUUAAUUCG-(AUGCAACG)CGAAGAACCUUACCAGGACUUG chl.C.vu.1 1700 ACA----UG|-CC-ACU--U-------UUUCCCU-----(GAA-A-)GGG chl.C.vu.1 1750 GA-AG----u--------------(ucca------)------------g- chl.C.vu.1 1800 ---------------|AGUGGACA|C|AGGUGGUGCAUG|GCU|GUCGUC chl.C.vu.1 1850 A|-G-CUCGU|GUC(UUGA)GAUGUUGGG(UUAAGU)CCCGCAACGAGCG chl.C.vu.1 1900 CAACCCUUG|UUUUGA-A-UUGCC-------------------------- chl.C.vu.1 1950 -------------------------------------------------- chl.C.vu.1 2000 -------------------------------------------------- chl.C.vu.1 2050 -----------------------------(--aguaau--)--------- chl.C.vu.1 2100 |GGGAAAUUCAAAAGACUGCCGGU(GACAA----)--------------- chl.C.vu.1 2150 ---------GCCGGAGGAAGGUGAGGAUGACGUC-AA--GUCAGCAUGCC chl.C.vu.1 2200 CCUUACGUCCUGGGCGAC-ACACGUGCUACAAUGGC--CGGGACAAAGAG chl.C.vu.1 2250 AU----GCAAACCC--------------------(----GCGA-)----- chl.C.vu.1 2300 --------------GGGC-UAGCCAACC-UCAA-AAACCCGGUCUCAGUU chl.C.vu.1 2350 CGGAUUGCAGGC(--UGCAACUC)GCCUGCAUGAAGUCGGAAUCGCU--- chl.C.vu.1 2400 ---AGUAAU-CGCAGG(UC--AGCCAU)ACUGCGGUGAAUAC--GUU--- chl.C.vu.1 2450 -----------------CCCGGGCCUUGUACACACCGCCCGUCACACCAU chl.C.vu.1 2500 GGGAGCUGG-CUAUGCCCAAAGUCGUU---ACCCC-AACCu(-----uuu chl.C.vu.1 2550 -------)aGG-AGG-GGG-AC-GCCU-AAGG-CAGAGCUAGUGACUAGG chl.C.vu.1 2600 GUGAAGUCGUAACAAGGUAGCCGUACU(GGAA)GGUGWGGYUGGAUCACC chl.C.vu.1 2650 UCCUUG--|~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ chl.C.vu.1 2700 ~~~~~~~~~~~~~~~~| chl.C.vu.2 0 |---------nnnnnnnnnnnnn-nn(n-nn)nnnn|nnnnCAGGAUGAA chl.C.vu.2 50 CGC-UGGCGGCAUGCUU--AACACAUGCAAGUCGUACG|CA--------- chl.C.vu.2 100 ugc-aauuugg(cu------------------ug------)ccagauu-- chl.C.vu.2 150 -gcga-----------UG--AGU--GGCGCACGGGUGAGUAA-CACGUAA chl.C.vu.2 200 GA-ACCUAC-CUUU------------------------------------ chl.C.vu.2 250 -------------------------------------------------U chl.C.vu.2 300 GGA---------GAGGGAUAACCA------------------------UU chl.C.vu.2 350 G(GAAA)CGA-UGGCUAAUACC-UCGU-AU-------------------- chl.C.vu.2 400 -------u----------GCU-------(GAGA---)-------AGU--- chl.C.vu.2 450 ---GAAA-----------------------GAU-------------(--- chl.C.vu.2 500 -------gaaa------)---------|----AUCGCCAAUAGA-UGG|G chl.C.vu.2 550 -CUUGCGG|-CUGAUUA-GCUUGUUGG-UG-AG(G-UAAUGG)-CUUACC chl.C.vu.2 600 AA|GGCAAUGAU|CAGUAGCUG|GUCU(GAGA)GGAUGAUCAGC|CACAC chl.C.vu.2 650 UGGGA(CUGAGACACG)GCCCAGA-C--UCC(UA-CG)GG-A--GGCAG- chl.C.vu.2 700 CAGUGAGG-AAUUUUCCG-CAAU-GGGC-(-GACA)-GCCU-GACGGA|G chl.C.vu.2 750 CAAUGCCGCGUGAAGGAUGAAGGCC(---UAUG--)GG-UU--GUAAACU chl.C.vu.2 800 UC|UUUU-CUCAGAGAAGAAGC--------(--------)--------AU chl.C.vu.2 850 UGACG|GU-AUCU-GAGGAA-UAAGCAUC|GGCU-AACU-CUGUG(CCA- chl.C.vu.2 900 -GCAGCC|GCGGU---AA-)GACAGAG|GAUGCAAGCGUUAU-CCGGAAU chl.C.vu.2 950 GAUUGGGC|GUAAAGCGUCUGUAGGUG|GCUUAAAAAG-|UCU-CCUGUC chl.C.vu.2 1000 AAAGAUCAGGGC(------------------------------------- chl.C.vu.2 1050 ---------------------------------UUA)ACCCUGG-GC-CG chl.C.vu.2 1100 GCAGG--AGA-AAC-U|UUU-AG-G-CUAGAG-UU|UGGUA-----GGGG chl.C.vu.2 1150 CAGAG|GGAAUUCCCGG-UGGAGCG(GUGAAA)UGCGUAGAGA---UCGG chl.C.vu.2 1200 GAGGAACACCAAA---GGC(GAAA)GC|A|CUCUG-CUG|GGCCA--U-- chl.C.vu.2 1250 -------------------------------------------------- chl.C.vu.2 1300 ----------AACUGACACU|GAG-AGACGAAAGCGAGGGGAGCAAAAGG chl.C.vu.2 1350 G(AUU-A-GAUAC)-CCCUGUAG-|UC-CUC-GCCGUAAACGAUGGAU-- chl.C.vu.2 1400 --AC|UA|GAUG-UUGGGUa------------------(-------gguu chl.C.vu.2 1450 aaau-)-------------------------------------------- chl.C.vu.2 1500 |------------------------------|-CACUCAGUAUC-GUAGC chl.C.vu.2 1550 (UAAC)GCGU-GAAGUAUCC|C|GCCUGGGGAGUAUGCUC(GCAA)GAGU chl.C.vu.2 1600 GAAACUCAAAGGAAUUGACGGGGGCCC-GCACA-------AGCGGU|GGA chl.C.vu.2 1650 GCAUGUGGUUUAAUUCG-(AUGCAACG)CGAAGAACCUUACCAGGACUUG chl.C.vu.2 1700 ACA----UG|-CC-ACU--U-------UUUCCCU-----(GAA-A-)GGG chl.C.vu.2 1750 GA-AGU------------------(ucgag-----)-------------- chl.C.vu.2 1800 ---------------|AGUGGACA|C|AGGUGGUGCAUG|GCU|GUCGUC chl.C.vu.2 1850 A|-G-CUCGU|GUC(UUGA)GAUGUUGGG(UUAAGU)CCCGCAACGAGCG chl.C.vu.2 1900 CAACCCUUG|UUUUGA-A-UUGCCA-G----------------------- chl.C.vu.2 1950 -------------------------------------------------- chl.C.vu.2 2000 -------------------------------------------------- chl.C.vu.2 2050 -----------------------------(--uaaug---)--------- chl.C.vu.2 2100 |GGAAA-UUCAAAAGACUGCCGGU(GACAA----)--------------- chl.C.vu.2 2150 ---------GCCGGAGGAAGGUGAGGAUGACGUC-AA--GUCAGCAUGCC chl.C.vu.2 2200 CCUUACGUCCUGGGCGAC-ACACGUGCUACAAUGGC--CGGGACAAAGAG chl.C.vu.2 2250 AU----GCAAACCC--------------------(----GCGA-)----- chl.C.vu.2 2300 --------------GGGC-UAGCCAACC-UCAA-AAACCCGGUCUCAGUU chl.C.vu.2 2350 CGGAUUGCAGGC(--UGCAACUC)GCCUGCAUGAAGUCGGAAUCGCU--- chl.C.vu.2 2400 ---AGUAAU-CGCAGG(UC--AGCCAU)ACUGCGGUGAAUAC--GUU--- chl.C.vu.2 2450 -----------------CCCGGGCCUUGUACACACCGCCCGUCACACCAU chl.C.vu.2 2500 GGGAGCUGG-CUAUGCCCAAAGUCGUU---ACCCC-AACC-(---u-uuu chl.C.vu.2 2550 a------)-GG-AGG-GGG-AC-GCCU-AAGG-CAGAGCUAGUGACUAGG chl.C.vu.2 2600 GUGAAGUCGUAACAAGGUAGCCGUACU(GGAA)GGUGCnnnnnnnnnnnn chl.C.vu.2 2650 nnnnnn--|~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ chl.C.vu.2 2700 ~~~~~~~~~~~~~~~~| chl.C.vu.3 0 |----aaaaauuuucauggaGAG-UU(U-GA)UCCU|GGCUCAGGAUGAA chl.C.vu.3 50 CGC-UGGCGGCAUGCUU--AACACAUGCAAGUCGUACG|CA--------- chl.C.vu.3 100 ugc-aauuugg(cu------------------ug------)ccagauu-- chl.C.vu.3 150 -gcga-----------UG--AGU--GGCGGACGGGUGAGUAA-CACGUAA chl.C.vu.3 200 GA-ACCUAC-CUUU------------------------------------ chl.C.vu.3 250 -------------------------------------------------U chl.C.vu.3 300 GGA---------GAGGGAUAACCA------------------------UU chl.C.vu.3 350 G(GAAA)CGA-UGGCUAAUACC-UCGU-AU-------------------- chl.C.vu.3 400 -------u----------GCU-------(GAGA---)-------AGU--- chl.C.vu.3 450 ---GAAA-----------------------GAU-------------(--- chl.C.vu.3 500 -------gaaa------)---------|----AUCGCCAAUAGA-UGG|G chl.C.vu.3 550 -CUUGCGG|-CUGAUUA-GCUUGUUGG-UG-AG(G-UAAUGG)-CUUACC chl.C.vu.3 600 AA|GGCAAUGAU|CAGUAGCUG|GUCU(GAGA)GGAUGAUCAGC|CACAC chl.C.vu.3 650 UGGGA(CUGAGACACG)GCCCAGA-C--UCC(UA-CG)GG-A--GGCAG- chl.C.vu.3 700 CAGUGAGG-AAUUUUCCG-CAAU-GGGC-(-GACA)-GCCU-GACGGA|G chl.C.vu.3 750 CAAUGCCGCGUGAAGGAUGAAGGCC(---UAUG--)GG-UU--GUAAACU chl.C.vu.3 800 UC|UUUU-CUCAGAGAAGAAGC--------(--------)--------AU chl.C.vu.3 850 UGACG|GU-AUCU-GAGGAA-UAAGCAUC|GGCU-AACU-CUGUG(CCA- chl.C.vu.3 900 -GCAGCC|GCGGU---AA-)GACAGAG|GAUGCAAGCGUUAU-CCGGAAU chl.C.vu.3 950 GAUUGGGC|GUAAAGCGUCUGUAGGUG|GCUUAAAAAG-|UCU-CCUGUC chl.C.vu.3 1000 AAAGAUCAGGGC(------------------------------------- chl.C.vu.3 1050 ---------------------------------UUA)ACCCUGG-GC-CG chl.C.vu.3 1100 GCAGG--AGA-AAC-U|CUU-AG-G-CUAGAG-UU|UGGUA-----GGGG chl.C.vu.3 1150 CAGAG|GGAAUUCCCGG-UGGAGCG(GUGAAA)UGCGUAGAGA---UCGG chl.C.vu.3 1200 GAGGAACACCAAA---GGC(GAAA)GC|A|CUCUG-CUG|GGCCA--U-- chl.C.vu.3 1250 -------------------------------------------------- chl.C.vu.3 1300 ----------AACUGACACU|GAG-AGACGAAAGCGAGGGGAGCAAAAGG chl.C.vu.3 1350 G(AUU-A-GAUAC)-CCCUGUAG-|UC-CUC-GCCGUAAACGAUGGAU-- chl.C.vu.3 1400 --AC|UA|GAUG-UUGGGUa------------------(-------gguu chl.C.vu.3 1450 aaau-)-------------------------------------------- chl.C.vu.3 1500 |------------------------------|-CACUCAGUAUC-GUAGC chl.C.vu.3 1550 (UAAC)GCGU-GAAGUAUCC|C|GCCUGGGGAGUAUGCUC(GCAA)GAGU chl.C.vu.3 1600 GAAACUCAAAGGAAUUGACGGGGGCCC-GCACA-------AGCGGU|GGA chl.C.vu.3 1650 GCAUGUGGUUUAAUUCG-(AUGCAACG)CGAAGAACCUUACCAGGACUUG chl.C.vu.3 1700 ACA----UG|-CC-ACU--U-------UUUCCCU-----(GAA-A-)GGG chl.C.vu.3 1750 GA-AGU------------------(uccag-----)-------------- chl.C.vu.3 1800 ---------------|AGUGGACA|C|AGGUGGUGCAUG|GCU|GUCGUC chl.C.vu.3 1850 A|-G-CUCGU|GUC(UUGA)GAUGUUGGG(UUAAGU)CCCGCAACGAGCG chl.C.vu.3 1900 CAACCCUUG|UUUUGA-A-UUGCCA-G----------------------- chl.C.vu.3 1950 -------------------------------------------------- chl.C.vu.3 2000 -------------------------------------------------- chl.C.vu.3 2050 -----------------------------(--uaaug---)--------- chl.C.vu.3 2100 |GGAAA-UUCAAAAGACUGCCGGU(GACAA----)--------------- chl.C.vu.3 2150 ---------GCCGGAGGAAGGUGAGGAUGACGUC-AA--GUCAGCAUGCC chl.C.vu.3 2200 CCUUACGUCCUGGGCGAC-ACACGUGCUACAAUGGC--CGGGACAAAGAG chl.C.vu.3 2250 AU----GCAAACCC--------------------(----GCGA-)----- chl.C.vu.3 2300 --------------GGGC-UAGCCAACC-UCAA-AAACCCGGUCUCAGUU chl.C.vu.3 2350 CGGAUUGCAGGC(--UGCAACUC)GCCUGCAUGAAGUCGGAAUCGCU--- chl.C.vu.3 2400 ---AGUAAU-CGCAGG(UC--AGCCAU)ACUGCGGUGAAUAC--GUU--- chl.C.vu.3 2450 -----------------CCCGGGCCUUGUACACACCGCCCGUCACACCAU chl.C.vu.3 2500 GGGAGCUGG-CUAUGCCCAAAGUCGUU---ACCCC-AACCu(---u-uua chl.C.vu.3 2550 -------)-GG-AGG-GGG-AC-GCCU-AAGG-CAGAGCUAGUGACUAGG chl.C.vu.3 2600 GUGAAGUCGUAACAAGGUAGCCGUACU(GGAA)GGUGCGGCUGGAACACC chl.C.vu.3 2650 U-------|~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ chl.C.vu.3 2700 ~~~~~~~~~~~~~~~~| chl.N.euca 0 |~~~~~~~~~~~~UCACGGAGAG-UU(U-GA)UCCU|GGCUCAGGAUGAA chl.N.euca 50 CGC-UGGCGGCAUGCUU--AACACAUGCAAGUCGAACG|AA-------ca chl.N.euca 100 uaa-aauugug(cu------------------ug------)cauaauu-- chl.N.euca 150 -uuauac---------UG--AGU--GGCGGACGGGUGAGUAA-CACGUAA chl.N.euca 200 GA-ACCUAC-CUUU------------------------------------ chl.N.euca 250 -------------------------------------------------U chl.N.euca 300 GGC---------GAGGGACAACCA------------------------UU chl.N.euca 350 G(GAAA)CGAAUGGCUAAUACC-UCAU-AU-------------------- chl.N.euca 400 -------u----------ACU-------(GAGA---)-------AGU--- chl.N.euca 450 ---GAAA-----------------------gau-------------(--- chl.N.euca 500 -----g-aaua------)---------|----AUCACCAAGAGA-UGG|G chl.N.euca 550 -CUU--GU|-CUGAUCA-GCUUGUUGG-UA-AG(G-UAAUGG)-CUUACC chl.N.euca 600 AA|GGCAACGAU|CAGUAGCUG|GUCU(GAGA)GGAUGAUCAGC|CACAC chl.N.euca 650 UGGGA(CUGAGACACG)GCCCAGA-C--UCA(UA-CG)GGaA--GGCAGG chl.N.euca 700 CAGUGAGG-AAUUUUCCG-CAAUGGGGC-(GGAAA)-GCCGUGACGGA|G chl.N.euca 750 CAAUGCCGCGUGAAGGAUGAAUGCC(---UAUG--)GGUUG--GUAAACU chl.N.euca 800 UC|UUUU-CUCAGAGAAGAAUu--------(--------)---------U chl.N.euca 850 UGACG|GU-AUCU-GAGGAA-UAAGCAUC|GGCU-AACU-CUGUG(CCA- chl.N.euca 900 -GCAGCC|GCGGU---AA-)GACAGAG|GAUCGAAGCGUUAU-CCGGAUU chl.N.euca 950 GAUUGGGC|GUAAAGCGUCUGUAGGUG|GUUUAUCCAG-|UCU-UCUGUC chl.N.euca 1000 AAAG-UCAGGGC(------------------------------------- chl.N.euca 1050 ---------------------------------UUA)ACCUUGG-AU-AG chl.N.euca 1100 GCAGG--AGA-AAC-U|AAU-AG-A-CUAGAG-UU|CGGUA-----GGGG chl.N.euca 1150 CAGAG|GGAAUUCCCGG-UGGAGCG(GUGAAA)UGCGUAGAGA---U-CG chl.N.euca 1200 GA-GAACACCAAA---GGC(GAAA)GC|A|CUUCUgCUG|GGCCG--C-- chl.N.euca 1250 -------------------------------------------------- chl.N.euca 1300 ----------GACUGACACU|GAG-AGACGAAAGCGAGGGGAGCAAAUGG chl.N.euca 1350 G(AUU-A-GAUAC)-CCCAGUAG-|UC-UC--GCCGUAAACGAUGGAU-- chl.N.euca 1400 --AC|UA|GGUG-UUGGGUG------------------(--------aua chl.N.euca 1450 uua--)-------------------------------------------- chl.N.euca 1500 |------------------------------|-CAUUCAGUACC-GUAGC chl.N.euca 1550 (UAAC)GCGU-GAAGUAUCC|C|GCCUGGGGAGUAUGCUC(GCAA)GCGU chl.N.euca 1600 GAAACUCAAAGGAAUUGACGGGGGCCC-GCACA-------AGCG-U|GGA chl.N.euca 1650 GCAUGUGGUUUAAUUCG-(AUGCAACG)CGAAGAACCUUACCAGGGCUUG chl.N.euca 1700 ACA----UG|-CC-ACU--U-------UUUUCUU-----(GAA-A-)AAG chl.N.euca 1750 AA-AGU------------------(uccg------)-------------- chl.N.euca 1800 ---------------|AGUGGACA|C|AGGUGGUGCAUG|GCU|GUCGUC chl.N.euca 1850 A|-GCCUCGU|GUC(UUGA)GAUGUUGGG(UUAAGU)CC-GCAACGAGCG chl.N.euca 1900 CAACCCUUA|UUU-gu-g-uugcu-------------------------- chl.N.euca 1950 -------------------------------------------------- chl.N.euca 2000 -------------------------------------------------- chl.N.euca 2050 -----------------------------(--auuuua--)--------- chl.N.euca 2100 |ggaacuca-aagacucc-gu----gaua--------------------- chl.N.euca 2150 ------------gcgagAAGGUGAGGAUGACGUC-AA--GUCAGCAUGCC chl.N.euca 2200 U----gacgCUGGGC-AC-ACACGUGAUACAAUGGC--UGGGACAAAGAG chl.N.euca 2250 AU----G-aacccc--------------------(----acaa-)----- chl.N.euca 2300 --------------ggca--AGCCAACC-UCAA-AAACCCAGUCUUAGUU chl.N.euca 2350 CGGAUUGUAGGC(--UGAAACUC)GCCUACAUGAAGCUGGAAU-GCU--- chl.N.euca 2400 ---AGUAAUGCGCAGG(UCuauGCCAU)ACUGCGGUGAAUAC--GUU--- chl.N.euca 2450 -----------------CCCGGGCCUUGUACACACCGC-CGUCACACCAU chl.N.euca 2500 GGAAGCUGG-CUAUGCC-AAAGUCG-U---ACUC--AAC--(-----uua chl.N.euca 2550 g------)--g-AGG-AGg-a---GCU-AAGG-CAGA-CUAGUGACUAGG chl.N.euca 2600 GUG-AGU-GU-ACA--GUAGCCGUACU(GGAA)GGUGCGGCUGGAU-ACC chl.N.euca 2650 UCCUUA--|~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ chl.N.euca 2700 ~~~~~~~~~~~~~~~~| A.nidulans 0 |-----------AAAAUGGAGAG-UU(U-GA)UCCU|GGCUCAGGAUGAA A.nidulans 50 CGC-UGGCGGCGUGCUU--AACACAUGCAAGUCGAACG|GG--------- A.nidulans 100 --------cuc(uu------------------cg------)gag------ A.nidulans 150 ----------------CU--AGU--GGCGGACGGGUGAGUAA-CGCGUGA A.nidulans 200 GA-AUCUGC-CUAC------------------------------------ A.nidulans 250 -------------------------------------------------A A.nidulans 300 GGA---------CGGGGACAACAG------------------------UU A.nidulans 350 G(GAAA)CGA-CUGCUAAUACC-CGAU-gu-------------------- A.nidulans 400 ------------------GCC-------(GAGA---)-------GGU--- A.nidulans 450 ---GAAA-----------------------CA--------------(--- A.nidulans 500 -------UUUA------)---------|-----UGGCCUGUAGA-UGA|G A.nidulans 550 -CUCGCGU|-CUGAUUA-GCUAGUUGG-UG-GG(G-UAAGGG)-CCUACC A.nidulans 600 AA|GGCGACGAU|CAGUAGCUG|GUCU(GAGA)GGAUGAUCAGC|CACAC A.nidulans 650 UGGGA(CUGAGACACG)GCCCAGA-C--UCC(UA-CG)GG-A--GGCAG- A.nidulans 700 CAGUGGGG-AAUUUUCCG-CAAU-GGGC-(-GCAA)-GC---GACGGA|G A.nidulans 750 CAACGCCGCGUGGGGGAGGAAGGUU(---UUUG--)GA-CU--GUAAACC A.nidulans 800 CC|UUUU-CUCAGGGAAGAAG---------(---AaA-G)---------- A.nidulans 850 UGACG|GU-ACCU-GAGGAA-UAAGCCUC|GGCU-AAUU-CCGUG(CCA- A.nidulans 900 -GCAGCC|GCGGU---AA-)UACGGGA|GAGGCAAGCGUUAU-CCGGAAU A.nidulans 950 UAUUGGGC|GUAAAGCGCCUGCAGGCG|GUUAAUCAAG-|UCU-GUUGUC A.nidulans 1000 AAAGCGUGGGGC(------------------------------------- A.nidulans 1050 ---------------------------------UCA)ACCUCAU-AC-AG A.nidulans 1100 GCAAU--GGA-AAC-U|GAU-UG-A-CUAGAG-UA|UGGUA-----GGGG A.nidulans 1150 UAGCG|GGAAUUCCAGG-UGUAGCG(GUGAAA)UGCGUAGAUA---UCUG A.nidulans 1200 GAAGAACACCAGC---GGC(GAAA)GC|G|CGCUA-CUG|GGCCA--U-- A.nidulans 1250 -------------------------------------------------- A.nidulans 1300 ----------AACUGACGCU|CAU-GGACGAAAGCUAGGGGAGCGAAAGG A.nidulans 1350 G(AUU-A-GAUAC)-CCCUGUAG-|UC-CUA-GCCGUAAACGAUGAAC-- A.nidulans 1400 --AC|UA|GGUG-UUGCGUG------------------(-------aauc A.nidulans 1450 gacc-)-------------------------------------------- A.nidulans 1500 |------------------------------|-CGCGCAGUGCC-GUAGC A.nidulans 1550 (CAAC)GCGU-UAAGUGUUC|C|GCCUGGGGAGUACGCAC(GCAA)GUUG A.nidulans 1600 GAAACUCAAAGGAAUUGACGGGGGCCC-GCACA-------AGCGGU|GGA A.nidulans 1650 GUAUGUGGUUUAAUUCG-(AUGCAACG)CGAAGAACCUUACCAGGGUUUG A.nidulans 1700 ACA----UC|-CC-CCG--AA------UCUCUUG-----(GAA-A-)CGA A.nidulans 1750 GA-GAG---UG--CC---------(UUCG------)---------GGAG- A.nidulans 1800 ---------------|CGGGGAGA|C|AGGUGGUGCAUG|GCU|GUCGUC A.nidulans 1850 A|-G-CUCGU|GUC(GUGA)GAUGUUGGG(UUAAGU)CCCGCAACGAGCG A.nidulans 1900 CAACCCACG|UUUUUA-G-UUGCC-AUCA--------------------- A.nidulans 1950 -------------------------------------------------- A.nidulans 2000 -------------------------------------------------- A.nidulans 2050 -----------------------------(--uucagu--)-------UG A.nidulans 2100 |GGCACUCUAGAGAAACUGCCGGU(GACAA----)--------------- A.nidulans 2150 ---------ACCGGAGGAAGGUGUGGACGACGUC-AA--GUCAUCAUGCC A.nidulans 2200 CCUUACAUCCUGGGCUAC-ACACGUACUACAAUGCU--CCGGACAGCGAG A.nidulans 2250 AC----GCGAAGCC--------------------(----GCGA-)----- A.nidulans 2300 --------------GGUG-AAGCAAAUC-UCCC-AAACCGGGGCUCAGUU A.nidulans 2350 CAGAUUGCAGGC(--UGCAACUC)GCCUGCAUGAAGGCGGAAUCGCU--- A.nidulans 2400 ---AGUAAU-CGCAGG(UC--AGC-AU)ACUGCGGUGAAUAC--GUU--- A.nidulans 2450 -----------------CCCGGGCCUUGUACACACCGCCCGUCACACCAU A.nidulans 2500 GGAAGUUGG-CCAUGCCCGAAGUCGUU---ACCCU-AACCg(-----uuc A.nidulans 2550 g------)cGG-AGG-GGG-GC-GCCG-AAGG-UAGGGCUGAUGACUGGG A.nidulans 2600 GUGAAGUCGUAACAAGGUAGCCGUACC(GGAA)GGUGUGGCUGGAUCACC A.nidulans 2650 UCCUUU--|~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ A.nidulans 2700 ~~~~~~~~~~~~~~~~| Synech.sp. 0 |-----------ACAAUGGAGAG-UU(U-GA)UCCU|GGCUCAGGAUGAA Synech.sp. 50 CGC-UGGCGGUAUGCCU--AACACAUGCAAGUCGAACG|GA--------- Synech.sp. 100 -------guuc(uu------------------cg------)gaac----- Synech.sp. 150 ----------------UU--AGU--GGCGGACGGGUGAGUAA-CACGUGA Synech.sp. 200 GA-ACCUAC-CUUC------------------------------------ Synech.sp. 250 -------------------------------------------------A Synech.sp. 300 GAA---------UGGGGACAACAG------------------------UU Synech.sp. 350 G(GAAA)CGA-CUGCUAAUACC-CAAU-GU-------------------- Synech.sp. 400 ------------------GCC-------(GAAA---)-------GGU--- Synech.sp. 450 ---GAAA-----------------------GA--------------(--- Synech.sp. 500 -------UUUA------)---------|-----UCGUCUGAAGA-UGG|G Synech.sp. 550 -CUCGCGU|-CUGAUUA-GCUAGAUGG-UG-GG(G-UAAGAG)-CCUACC Synech.sp. 600 AU|GGCAACGAU|CAGUAGCUG|GUCU(GAGA)GGAUGAGCAGC|CACAC Synech.sp. 650 UGGGA(CUGAGACACG)GCCCAGA-C--UCC(UA-CG)GG-A--GGCAG- Synech.sp. 700 CAGUGGGG-AAUUUUCCG-CAAU-GGGC-(-GAAA)-GCCU-GACGGA|G Synech.sp. 750 CAAUACCGCGUGAGGGAGGAAGGUC(---CUUG--)GA-UU--GUAAACC Synech.sp. 800 UC|UUUU-AUCAGGGAAGAAG---------(---UUC--)---------- Synech.sp. 850 UGACG|GU-ACCU-GAUGAA-UAAGCAUC|GGCU-AACU-CCGUG(CCA- Synech.sp. 900 -GCAGCC|GCGGU---AA-)UACGGAG|GAUGCAAGCGUUAU-CCGGAAU Synech.sp. 950 UAUUGGGC|GUAAAGCGUCCGUAGGUG|GUUAUGCAAG-|UCU-GCCGUU Synech.sp. 1000 AAAGAAUGGAGC(------------------------------------- Synech.sp. 1050 ---------------------------------UUA)ACUCCAU-AG-GA Synech.sp. 1100 GCGGU--GGA-AAC-U|GCA-AG-A-CUAGAG-UA|CAGUA-----GGGG Synech.sp. 1150 UAGCA|GGAAUUCCCAG-UGUAGCG(GUGAAA)UGCGUAGAUA---UUGG Synech.sp. 1200 GAAGAACAUCGGU---GGC(GAAA)GC|G|UGCUA-CUG|GGCUG--a-- Synech.sp. 1250 -------------------------------------------------- Synech.sp. 1300 ----------AACUGACACU|GAG-GGACGAAAGCUAGGGUAGCGAAAGG Synech.sp. 1350 G(AUU-A-GAUAC)-CCCUGUAG-|UC-CUA-GCCGUAAACGAUGGAU-- Synech.sp. 1400 --AC|UA|GGCG-UGGCUUG------------------(-------uauc Synech.sp. 1450 gacc-)-------------------------------------------- Synech.sp. 1500 |------------------------------|-CGAGCCGUGCC-GAAGC Synech.sp. 1550 (UAAC)GCGU-UAAGUAUCC|C|GCCUGGGGAGUACGCAC(GCAA)GUGU Synech.sp. 1600 GAAACUCAAAGGAAUUGACGGGGGCCC-GCACA-------AGCGGU|GGA Synech.sp. 1650 GUAUGUGGUUUAAUUCG-(AUGCAACG)CGAAGAACCUUACCAAGGCUUG Synech.sp. 1700 ACA----UC|-CC-UGG--AA------UCCUGCG-----(GAA-A-)CGU Synech.sp. 1750 GG-GAG---UG--CC---------(UUAG------)---------GGAG- Synech.sp. 1800 ---------------|CCAGGAGA|C|AGGUGGUGCAUG|GCU|GUCGUC Synech.sp. 1850 A|-G-CUCGU|GUC(GUGA)GAUGUUGGG(UUAAGU)CCCGCAACGAGCG Synech.sp. 1900 CAACCCUCG|UUUUUA-G-UUGCC-AUCA--------------------- Synech.sp. 1950 -------------------------------------------------- Synech.sp. 2000 -------------------------------------------------- Synech.sp. 2050 -----------------------------(--uuaagu--)-------UG Synech.sp. 2100 |GGCACUCUAGAGAGACUGCCGGU(GACAA----)--------------- Synech.sp. 2150 ---------ACCGGAGGAAGGUGGGGAUGACGUC-AA--GUCAUCAUGCC Synech.sp. 2200 CCUUACGCCUUGGGCUAC-ACACGUACUACAAUGGU--CGGGACAACGGG Synech.sp. 2250 CA----GCGAGCUC--------------------(----GCGA-)----- Synech.sp. 2300 --------------GAGU-AAGCGAAUC-CCAUCAAACCCGGCCUCAGUU Synech.sp. 2350 CAGAUUGCAGGC(--UGCAACUC)GCCUGCAUGAAGGAGGAAUCGCU--- Synech.sp. 2400 ---AGUAAU-CGCAGG(UC--AGA-AU)ACUGCGGUGAAUUC--GUU--- Synech.sp. 2450 -----------------CCCGGGCCUUGUACACACCGCCCGUCACACCAU Synech.sp. 2500 GGGAGCUGG-UCACGCCCGAAGUCGUU---ACUCU-AACC-(-----uua Synech.sp. 2550 g------)-GG-AGG-AGG-GC-GCCG-AAGG-CAGGGCUAGUGACUGGG Synech.sp. 2600 GUGAAGUCGUAACAAGGUAGCCGUACC(GGAA)GGUGUGGCUGGAUCACC Synech.sp. 2650 UCCUUU--|~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ Synech.sp. 2700 ~~~~~~~~~~~~~~~~| M.aeru.PCC 0 |-----------nnnnnnnnnnn-nn(n-nn)nnnn|nnnnnnnnnnnnA M.aeru.PCC 50 CGC-UGGCGGCGUGCCU--AACACAUGCAAGUCGAACG|GG--------- M.aeru.PCC 100 -------aauc(uu------------------cg------)gauu----- M.aeru.PCC 150 ----------------CU--AGU--GGCGGACGGGUGAGUAA-CGCGUAA M.aeru.PCC 200 GA-AUCUAA-CUUC------------------------------------ M.aeru.PCC 250 -------------------------------------------------A M.aeru.PCC 300 GGA---------CGGGGACAACAG------------------------UU M.aeru.PCC 350 G(GAAA)CGA-CUGCUAAUACC-CGAU-GU-------------------- M.aeru.PCC 400 ------------------GCC-------(GCGA---)-------GGU--- M.aeru.PCC 450 ---GAAA-----------------------CC--------------(--- M.aeru.PCC 500 -------UAAU------)---------|-----UGGCCUGGAGA-AGA|G M.aeru.PCC 550 -CUUGCGU|-CUGAUUA-GCUAGUUGG-UG-GG(G-UAAGGG)-CCUACC M.aeru.PCC 600 AA|GGCGACGAU|CAGUAGCUG|GUCU(GAGA)GGAUGAGCAGC|CACAC M.aeru.PCC 650 UGGGA(CUGAGACACG)GCCCAGA-C--UCC(UA-CG)GG-A--GGCAG- M.aeru.PCC 700 CAGUGGGG-AAUUUUCCG-CAAU-GGGC-(-GAAA)-GCCU-GACGGA|G M.aeru.PCC 750 CAACGCCGCGUGAGGGAGGAAGGUC(---UUUG--)GA-UU--GUAAACC M.aeru.PCC 800 UC|UUUU-CUCAAGGAAGAAG---------(---UUC--)---------- M.aeru.PCC 850 UGACG|GU-ACUU-GAGGAA-UCAGCCUC|GGCU-AACU-CCGUG(CCA- M.aeru.PCC 900 -GCAGCC|GCGGU---AA-)UACGGGG|GAGGCAAGCGUUAU-CCGGAAU M.aeru.PCC 950 UAUUGGGC|GUAAAGCGUCCGCAGGUG|GUCAGCCAAG-|UCU-GCCGUC M.aeru.PCC 1000 AAAUCAGGUUGC(------------------------------------- M.aeru.PCC 1050 ---------------------------------UUA)ACGACCU-AA-AG M.aeru.PCC 1100 GCGGU--GGA-AAC-U|GGC-AG-A-CUAGAG-AG|CAGUA-----GGGG M.aeru.PCC 1150 UAGCA|GGAAUUCCCAG-UGUAGC-(GUGAAA)UGCGUAGAGA---UUGG M.aeru.PCC 1200 GAAGAACAUCGGU---GGC(GAAA)GC|G|UGCUA-CUG|GGCUG--U-- M.aeru.PCC 1250 -------------------------------------------------- M.aeru.PCC 1300 ----------AUCUGACACU|CAG-GGACGAAAGCUAGGGGAGCGAAAGG M.aeru.PCC 1350 G(AUU-A-GAUAC)-CCCUGUAG-|UC-CUA-GCCGUAAACGAUGGAU-- M.aeru.PCC 1400 --AC|UA|GGCG-UGGCUUG------------------(-------uauc M.aeru.PCC 1450 gacc-)-------------------------------------------- M.aeru.PCC 1500 |------------------------------|-CGAGCCGUGCC-GAAGC M.aeru.PCC 1550 (UAAC)GCGU-UAAGUAUCC|C|GCCUGGGGAGUACGCAC(GCAA)GUGU M.aeru.PCC 1600 GAAACUCAAAGGAAUUGACGGGGGCCC-GCACA-------AGCGGU|GGA M.aeru.PCC 1650 GUAUGUGGUUUAAUUCG-(AUGCAACG)CGAAGAACCUUACCAAGACUUG M.aeru.PCC 1700 ACA----UG|-UC-GCG--AA------CCCUGGU-----(GAA-A-)GCU M.aeru.PCC 1750 GG-GGG---UG--CC---------(UUCG------)---------GGAG- M.aeru.PCC 1800 ---------------|CGCGAACA|C|AGGUGGUGCAUG|GCU|GUCGUC M.aeru.PCC 1850 A|-G-CUCGU|GUC(GUGA)GAUGUUGGG(UUAAGU)CCCGCAACGAGCG M.aeru.PCC 1900 CAACCCUCG|UUCUUA-G-UUGCC-AGCA--------------------- M.aeru.PCC 1950 -------------------------------------------------- M.aeru.PCC 2000 -------------------------------------------------- M.aeru.PCC 2050 -----------------------------(--uuaagu--)-------UG M.aeru.PCC 2100 |GGGACUCUAAGGAGACUGCCGGU(GACAA----)--------------- M.aeru.PCC 2150 ---------ACCGGAGGAAGGUGGGGAUGACGUC-AA--GUCAGCAUGCC M.aeru.PCC 2200 CCUUACGUCUUGGGCGAC-ACACGUACUACAAUGGU--CGGGACAAAGGG M.aeru.PCC 2250 CA----GCGAACUC--------------------(----GCGA-)----- M.aeru.PCC 2300 --------------GAGC-CAGCGAAUC-CCAGCAAACCCGGCCUCAGUU M.aeru.PCC 2350 CAGAUUGCAGGC(--UGCAACUC)GCCUGCAUGAAGGAGGAAUCGCU--- M.aeru.PCC 2400 ---AGUAAU-CGCCGG(UC--AGC-AU)ACGGCGGUGAAUUC--GUU--- M.aeru.PCC 2450 -----------------CCCGGGCCUUGUACACACCGCCCGUCACACCAU M.aeru.PCC 2500 GGAAGCUGG-UCACGCCCGAAGUCAUU---ACCUC-AACC-(-----gca M.aeru.PCC 2550 a------)-GG-AGG-GGG-GA-UGCCUAAGG-CAGGGCUAGUGACUGGG M.aeru.PCC 2600 GUGAAGUCGUAACAAGGUnnnnnnnnn(nnnn)nnnnnnnnnnnnnnnnn M.aeru.PCC 2650 nnnnnn--|~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ M.aeru.PCC 2700 ~~~~~~~~~~~~~~~~| chl.P.wick 0 |----------aaaacga-AGAG-UU(U-GA)UCCU|GGCUCAGGAUAAA chl.P.wick 50 CGC-UGGCGGCAUGCUU--AACACAUGCAAGUUGUACG|AA--------g chl.P.wick 100 gua-uuuaucu(uu------------------cg------)agcuaaa-- chl.P.wick 150 -uauac----------ug--AGU--AGCGGACGGGUGAGUAA-CACGUAA chl.P.wick 200 GA-AUCUAC-CUUU------------------------------------ chl.P.wick 250 -------------------------------------------------U chl.P.wick 300 GGA---------GAGGGAUAACUA------------------------CU chl.P.wick 350 G(GAAA)CGG-UAGCUAAUACC-UUAU-AU-------------------- chl.P.wick 400 -------U----------GCU-------(GAGA---)-------AGU--- chl.P.wick 450 ---GAAA-----------------------AAU-------------(--- chl.P.wick 500 -------GUAA------)---------|----AUUGCCAGAAGA-UGA|G chl.P.wick 550 -CUUGCGC|-CUGAUUA-GCUAGUUGG-UG-UG(G-UAACUG)-CAUACC chl.P.wick 600 AA|GGCAAUGAU|CAGUAGCUG|UUCU(GAGA)GGAUGAUCAGC|CACAC chl.P.wick 650 UGGGA(CUGAGACACG)GCCCAGA-C--UCC(UA-CG)GG-A--GGCAG- chl.P.wick 700 CAGUGAGG-AAUUUUCCG-CAAU-GGGC-(-GAAA)-GCCU-GACGGA|G chl.P.wick 750 CAAUGCCGCGUGAAGGAUGACGGCC(---UAUG--)GG-UU--GUAAACU chl.P.wick 800 UC|UUUU-CUCAGAAAAGAUUA--------(--------)---------A chl.P.wick 850 UGACG|GU-AUCU-GAGGAA-UAAGCAUC|GGCU-AACU-CUGUG(CCA- chl.P.wick 900 -GCAGCC|GCGGU---AA-)GACAGAG|GAUGCAAGCGUUAU-CCGGAAU chl.P.wick 950 GAUUGGGC|GUAAAGCGUCUGUAGGUU|GUUUAAAAAG-|UAU-UCUGUC chl.P.wick 1000 AAAAAUUAGGGC(------------------------------------- chl.P.wick 1050 ---------------------------------UUA)ACCCUAU-AC-AG chl.P.wick 1100 GCAGA--AUA-AAC-U|UUU-AA-G-CUAGAG-UU|UGGUA-----GAGG chl.P.wick 1150 CAGAG|GGAAUUCCCGG-UGGAGCG(GUGAAA)UGCGUAGAUA---UCGG chl.P.wick 1200 GAGGAACACCAAA---GGC(GAAG)GC|A|CUCUG-CUG|GGCCA--A-- chl.P.wick 1250 -------------------------------------------------- chl.P.wick 1300 ----------UACUGACACU|GAG-AGACGAAAGCGAGGGGAGCAAAUGG chl.P.wick 1350 G(AUU-A-GAUAC)-CCCAGUAG-|UC-CUC-GCUGUAAACGAUGGAU-- chl.P.wick 1400 --AC|UA|GGUG-UUGGGUG------------------(-------uauc chl.P.wick 1450 aaaaa)-------------------------------------------- chl.P.wick 1500 |------------------------------|-CAUUCAGUAUC-GUAGC chl.P.wick 1550 (UAAC)GCAU-UAAGUUUCC|C|GCCUGGGGAGUAUGCUC(GCAA)GAGU chl.P.wick 1600 GAAACUCAAAGGAAUUGACGGGAACCC-GCACA-------AUUGGU|GGG chl.P.wick 1650 GUACGUGGUUUAAUUCG-(AUGCAACG)CGAAGAACCUUACCAGGAUUUG chl.P.wick 1700 ACA----UG|-UC-AUU--UG------uuucuuc------aac-----uu chl.P.wick 1750 aa-uac---uu--uaauuuguuuu(aagua-----)gaaacaua-aaaa- chl.P.wick 1800 ---------------|AAUGAACA|C|AGGUGGUGCAUG|GCU|GUCGUC chl.P.wick 1850 A|-G-CUCGU|GUC(UUGA)GAUGUUGGG(UUAAGU)CCCGCAACGAGCG chl.P.wick 1900 CAACCCUUU|UUUUGA-A-UUGCUu------------------------- chl.P.wick 1950 -------------------------------------------------- chl.P.wick 2000 -------------------------------------------------- chl.P.wick 2050 ggggcau(uau)augccuuuuuacag---(----------)--------- chl.P.wick 2100 |AGGAAAUUCAAAAGACUGCCGGU(GAUAA----)--------------- chl.P.wick 2150 ---------GCCGGAGGAAGGUGAGGAUGACGUC-AA--GUCAGCAUGCC chl.P.wick 2200 CCUUAUAUCCUGGGCGAC-ACACGUGCUACAAUGGA--CGUAACAAAGAG chl.P.wick 2250 AA----GCUACUUC--------------------(----GCGA-)----- chl.P.wick 2300 --------------GAAC-AAGCUAAUC-UCAA-AAAUACGUUCUCAGUU chl.P.wick 2350 CGGAUUGCAGGC(--UGCAACUC)GCCUGCAUGAAGUUGGAAUCAAU--- chl.P.wick 2400 ---AGUAAU-CGCAGG(UC--AGCCAC)ACUGCGGUGAAUAC--GUU--- chl.P.wick 2450 -----------------UCCGGGUUUUGCACACACCGCCCGUCACACCA- chl.P.wick 2500 cggaaauug-cuacgcccuaaaucauu---acccu-aacc--auuc--ug chl.P.wick 2550 u------)-GG-AGG-GGG-AU-GCCU-AAGG-CGGGGCUGGUAACUGGG chl.P.wick 2600 GUGAAGUCGUAACAAGGUAGCCGUACU(GGAA)GGUGCGGCUGGAUCACC chl.P.wick 2650 U-------|~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ chl.P.wick 2700 ~~~~~~~~~~~~~~~~| chl.P.zopf 0 |---------UGCCUGCAGAGAG-UU(Y-GA)UCCU|GGCUCAGGAUGAA chl.P.zopf 50 CGC-UUGUGGUAGGCUUU-AACACAUGCAAGUCG-ACG|AU--------- chl.P.zopf 100 -uu-auuaaau(uu------------------uu------)auuuaau-- chl.P.zopf 150 -a--------------AA--AGU--GGCGAACGGGUGAGUAA-UACAUAA chl.P.zopf 200 GA-ACUUAC-UUUU------------------------------------ chl.P.zopf 250 -------------------------------------------------U chl.P.zopf 300 GGA---------UAGGUAUAGUUU------------------------AA chl.P.zopf 350 A(GAAA)UUU-AAAGUAAUCCC-UAAU-AU-------------------- chl.P.zopf 400 -------U----------GCUUUUA---(uuuu---)---UAAAAGU--- chl.P.zopf 450 ---GAA----------------------------------------(--- chl.P.zopf 500 -----------------)---------|-------ACCGAGAAA-AAG|G chl.P.zopf 550 -CUUAUGU|-CUGAUUA-GCUAGUUGG-UA-AG(A-UAAUAG)-CUUACC chl.P.zopf 600 AA|GGCGACAAU|CAGUAGUUG|GUCU(GAGA)GGAUGAUCAGC|CACAU chl.P.zopf 650 UGGGA(CUGAGAUACG)GCCCAAA-C--UCC(UA-CG)GG-A--GGCAG- chl.P.zopf 700 CAGUGAGG-AAUAUUCCG-CAAU-GAGC-(-GAAA)-GCUU-GACGGA|G chl.P.zopf 750 CCAUACCACGUGACCGAAGAAGGC-(---UAA---)-G-UC--GUAAAGG chl.P.zopf 800 UC|UUUU-CUUAGAAAUGAAAA--------(--------)-------aAA chl.P.zopf 850 UGACA|GU-AUCU-AAGGAA-UAAGUAUC|GGCU-AACU-CUGUG(CCA- chl.P.zopf 900 -GCAGCC|GCGGU---AA-)UACAGAG|GAUGCAAGCGUUAU-CCGGAUU chl.P.zopf 950 UACUGGGC|GUAAAGAGUCUGUAGGUU|GUUUUAAAAG-|UCA-AAUGUU chl.P.zopf 1000 AAAGAUUAAGGC(------------------------------------- chl.P.zopf 1050 ---------------------------------UCA)ACCUUAA-AA-AA chl.P.zopf 1100 GUGUU--UGA-AAC-U|UUA-AA-A-CUAGAG-AU|CAAUA-----GAGG chl.P.zopf 1150 UAGAG|GGUAUUUCUGG-UGAAGCG(GUGAAA)UGCUUAGAUA---UCAG chl.P.zopf 1200 AAAGACCAUCAAA---GGC(GAAG)GC|A|CUCUG-CUG|GGUUG--C-- chl.P.zopf 1250 -------------------------------------------------- chl.P.zopf 1300 ----------UUCUGACACU|GAG-AGACGAAAGCUAGGGUAGCAAAUAG chl.P.zopf 1350 G(AUU-A-GAUAC)-CCUAGUAG-|UC-CUA-GCUGUAAACGAUGGGA-- chl.P.zopf 1400 --AC|UA|GAUA-UUAAA--------------------(--------gaa chl.P.zopf 1450 uuu--)-------------------------------------------- chl.P.zopf 1500 |------------------------------|---UUUAAUAUC-UAAGC chl.P.zopf 1550 (UAAC)GCAU-UAAGUUCCC|C|GCCUGGGAAGUACAGUC(GCAA)GACC chl.P.zopf 1600 GAAACUUAAAGGAUUUGGCGGGAGCUU-ACACA-------AUUGGU|GGA chl.P.zopf 1650 GCAUGUGGUUUAAUUCG-(AUGAUACA)CGAAGAACCUUACCGAGGCUUG chl.P.zopf 1700 ACA----UA|-AC-UAU--UU------AAUUAUU-----(UUU-U-)AAU chl.P.zopf 1750 AA-aaa---ua--au---------(aua-------)---------auua- chl.P.zopf 1800 uguaaacuaauuaca|AUAGU-UA|C|AGGUGGUGCAUG|---|GUUGUC chl.P.zopf 1850 A|AG-UUCGU|GUU(GUGA)AACAUUGAG(UUCAGU)CUCGUAACGGACG chl.P.zopf 1900 GAACCCUAA|UUCUUU-Auuauaau-uauu-------------------- chl.P.zopf 1950 -------------------------------------------------- chl.P.zopf 2000 -------------------------------------------------- chl.P.zopf 2050 -----------------------------(--aaauuuua)------gau chl.P.zopf 2100 |uuuuuaugaagaauacguacuuu(---------)uuaauaauacuuuag chl.P.zopf 2150 uuauuauuauggguAGGAAGCCUAGGAUUUCGAC-AA--AUCAUUAUGCU chl.P.zopf 2200 CCUUACGCCUCGGGCUAC-ACAUGUGCUACAAUGGU--UAACUC----aa chl.P.zopf 2250 ua--------------------------------(--uauuau-)----- chl.P.zopf 2300 -------------------------uau-uuuC-AAUGUUAAUCAAAGUU chl.P.zopf 2350 CGAAUUAUAAAC(--UGAAACUC)GUUUAUAUGAAGUAGGAAUCAAU--- chl.P.zopf 2400 ---AGUAAU-CGCAAG(UC--AGCUAU)AUUGCGGUGAAACG---UC--- chl.P.zopf 2450 -----------------ACUGAGCUCUGUACAGACCGCCCGUCACACCUU chl.P.zopf 2500 GGAAAUUGA-UUUUAUUUAAAAAUAAU---UUAUAcaaaca(uuu--gaa chl.P.zopf 2550 a---aaa)ugg-cAA-AAA-UU-AUUC-AARA-UGAAAUGGAUAACUAAG chl.P.zopf 2600 GUGAAGUCGUAACAAGGUAGCCGUACU(GGAA)GGUGNGGNUGGAUCACC chl.P.zopf 2650 UCCUUG--|~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ chl.P.zopf 2700 ~~~~~~~~~~~~~~~~| chl.C.euga 0 |---------~ACCUAUGAUGAG-UU(U-GA)UCCU|GGCUCAGGAUGAA chl.C.euga 50 CGC-UGGCGGCAUGCUU--AACACAUGCAAGUCGAACG|GA--------- chl.C.euga 100 ----cugacag(gc------------------aa------)cuguuag-- chl.C.euga 150 ----------------uuu-AGU--GGCGGACGGGUGCGUAA-CGCGUAA chl.C.euga 200 GA-AUCAAC-AUUC------------------------------------ chl.C.euga 250 -------------------------------------------------U chl.C.euga 300 GGU---------GGGGGAUAAUAA------------------------CG chl.C.euga 350 G(GAAA)CUG-UUGGUAAUACC-GCAU-AA-------------------- chl.C.euga 400 -------A----------ACU-------(GAGG---)-------AGU--- chl.C.euga 450 ---UAAA-----------------------caau------------(--- chl.C.euga 500 -------GAAA------)---------|---gUUGGCCAGGAAA-CGA|G chl.C.euga 550 -CUUGCGU|-CUGAUUA-GCUAGUUGG-UA-AG(G-UAAAGG)-CUUACC chl.C.euga 600 AA|GGCCACGAU|CAGUAGCUG|GUCU(GAGA)GGAUGAUCAGC|CACAC chl.C.euga 650 UGGAA(CUGAGACACG)GUCCAGA-C--UCC(UA-CG)GG-A--GGCAG- chl.C.euga 700 CAGUGAGG-AAUUUUUCG-CAAU-GGGC-(-GCAA)-GCCU-GACGAA|G chl.C.euga 750 CAAUGCCGCGUGAGGGAAGAAGGGC(---CGUG--)GC-UC--GUAAACC chl.C.euga 800 UC|UUUU-UUCAGAGAAGAAUA--------(--------)--------AA chl.C.euga 850 UGACG|GU-AUCU-GAAGAA-UAAGCUCC|GGCU-AACU-AUGUG(CCA- chl.C.euga 900 -GCAGCC|GCGGU---AA-)UACAUGG|GGAGCAAGCGUUAU-CCGGAAU chl.C.euga 950 GAUUGGGC|GUAAAGCGUCUGUAGGUG|GUUGAAAAAG-|UCG-ACUGUC chl.C.euga 1000 AAAUCCCAAGGC(------------------------------------- chl.C.euga 1050 ---------------------------------UCA)ACCUUGG-UC-CG chl.C.euga 1100 GCAGU--CGAgUAC-U|UUU-UA-A-CUUGAG-UG|UGGUA-----GAGG chl.C.euga 1150 UAGAG|GGAAUCCCUAG-CGUAACA(GUGAAA)UGUGUAGAUU---UUAG chl.C.euga 1200 GGAGAACACCAGC---GGC(GAAG)GC|G|CUCUA-CUG|GGCCA--A-- chl.C.euga 1250 -------------------------------------------------- chl.C.euga 1300 ----------GACUGACACU|GAG-AGACGAAAGCUAAGGGAGCGAAUAG chl.C.euga 1350 G(AUU-A-GAUAC)-CCUAGUAG-|UC-UUA-GCUGUAAACGAUGGAA-- chl.C.euga 1400 --AC|UA|AGUG-CUGC---------------------(--------cga chl.C.euga 1450 au---)-------------------------------------------- chl.C.euga 1500 |------------------------------|----GCAGUGCU-GUAGC chl.C.euga 1550 (UAAC)GCGU-UAAGUUUCC|C|GCCUGGGGAGUAUGCUC(GCAA)GAGU chl.C.euga 1600 GAAACUCAAAGGAAUUGACGGGGGCCC-GCACA-------AUCAGU|GGA chl.C.euga 1650 UUAUGUGGUUUAAUUCG-(AUGCAACG)CGAAGAACCUUACCAGGGUUUG chl.C.euga 1700 ACA----UG|-CU-CAA--AA------AGACUCA-----(GAA-A-)UGG chl.C.euga 1750 GU-AAG---UG--CCA--------(GAAA------)--------UGGAA- chl.C.euga 1800 ---------------|UUGAGACA|C|AGGUGGUGCAUG|GCU|GUCGUC chl.C.euga 1850 A|-G-CUCGU|GCG(UUGA)CGUGUAUGG(UUAAGU)CCUGCAACGAGCG chl.C.euga 1900 CAACCCUCG|UCCACA-G-U------------------------------ chl.C.euga 1950 -------------------------------------------------- chl.C.euga 2000 -------------------------------------------------- chl.C.euga 2050 -----------------------------(--uaaauu--)--------- chl.C.euga 2100 |----CUCUGUGGAUACUGCCGGU(G-CAA----)--------------- chl.C.euga 2150 ---------ACUGGAGGAAGGUGAGGAUGACGUC-AA--GUCAGCAUGCC chl.C.euga 2200 CCUUACACCCUGGGCGAC-ACACGUAAUACAAUGGU--UGGGACAAUCAG chl.C.euga 2250 UA----GCUUAGCU--------------------(----GCGA-)----- chl.C.euga 2300 --------------AGUU-UGGCAAAUC-UGAG-AAACUCAACCUCAGUU chl.C.euga 2350 CGGAUUGCAGGC(--UGCAACUC)GCCUGCAUGAAGUCGGAAUUGAU--- chl.C.euga 2400 ---AGUAAU-CGCCAA(UC--AGCCAU)GUGGCGGUGAAUAC--GUU--- chl.C.euga 2450 -----------------CCCGGGCCUUGUACAAACCGCCCGUCACACCAA chl.C.euga 2500 GAAAGAUUG-UAGUCGGCAAAAUCCUU---AGCUU-AACC-(-----gaa chl.C.euga 2550 a------)-GG-AGG-GCG-GG-GCUU-ACCC-UAUUACCAUUGAUCAUG chl.C.euga 2600 GUGAAGUCGUAACAAGGUAGGGGUUCU(GGAA)GGAGUCCCUGGAUCACC chl.C.euga 2650 UCCUUC--|~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ chl.C.euga 2700 ~~~~~~~~~~~~~~~~| chl.C.moew 0 |----------ACCUAUGAUGAG-UU(U-GA)UCCU|GGCUCAGGAUGAA chl.C.moew 50 CGC-UGGCGGCAUGCUU--AACACAUGCAAGUCGAACG|GA--------- chl.C.moew 100 ----cugacag(gc------------------aa------)cuguuag-- chl.C.moew 150 ----------------uuu-AGU--GGCGGACGGGUGCGUAA-CGCGUAA chl.C.moew 200 GA-AUCAAC-AUUC------------------------------------ chl.C.moew 250 -------------------------------------------------U chl.C.moew 300 GGU---------GGGGGAUAAUAA------------------------CG chl.C.moew 350 G(GAAA)CUG-UUGGUAAUACC-GCAU-AA-------------------- chl.C.moew 400 -------A----------ACU-------(GAGG---)-------AGU--- chl.C.moew 450 ---UAAA-----------------------CAAU------------(--- chl.C.moew 500 -------gaaa------)---------|---GUUGGCCAGGAAA-CGA|G chl.C.moew 550 -CUUGCGU|-CUGAUUA-GCUAGUUGG-UA-AG(G-UAAAGG)-CUUACC chl.C.moew 600 AA|GGCCACGAU|CAGUAGCUG|GUCU(GAGA)GGAUGAUCAGC|CACAC chl.C.moew 650 UGGAA(CUGAGACACG)GUCCAGA-C--UCC(UA-CG)GG-A--GGCAG- chl.C.moew 700 CAGUGAGG-AAUUUUUCG-CAAU-GGGC-(-GCAA)-GCCU-GACGAA|G chl.C.moew 750 CAAUGCCGCGUGAGGGAAGAAGGGC(---CGUG--)GC-UC--GUAAACC chl.C.moew 800 UC|UUUU-UUCAGAGAAGAAUA--------(--------)--------AA chl.C.moew 850 UGACG|GU-AUCU-GAAGAA-UAAGCUCC|GGCU-AACU-AUGUG(CCA- chl.C.moew 900 -GCAGCC|GCGGU---AA-)UACAUAG|GGAGCAAGCGUUAU-CCGGAAU chl.C.moew 950 GAUUGGGC|GUAAAGCGUCUGUAGGUG|GUUGAAAAAG-|UCG-ACUGUC chl.C.moew 1000 AAAUCCCAAGGC(------------------------------------- chl.C.moew 1050 ---------------------------------UCA)ACCUUGG-UC-CG chl.C.moew 1100 GCAGU--CGAgUAC-U|UUU-UA-A-CUUGAG-UG|UGGUA-----GAGG chl.C.moew 1150 UAGAG|GGAAUCCCUAG-CGUAACA(GUGAAA)UGUGUAGAUU---UUAG chl.C.moew 1200 GGAGAACACCAGC---GGC(GAAG)GC|G|CUCUA-CUG|GGCCA--A-- chl.C.moew 1250 -------------------------------------------------- chl.C.moew 1300 ----------GACUGACACU|GAG-AGACGAAAGCUAAGGGAGCGAAUAG chl.C.moew 1350 G(AUU-A-GAUAC)-CCUAGUAG-|UC-UUA-GCUGUAAACGAUGGAA-- chl.C.moew 1400 --AC|UA|AGUG-CUGC---------------------(--------cga chl.C.moew 1450 au---)-------------------------------------------- chl.C.moew 1500 |------------------------------|----GCAGUGCU-GUAGC chl.C.moew 1550 (UAAC)GCGU-UAAGUUUCC|C|GCCUGGGGAGUAUGCUC(GCAA)GAGU chl.C.moew 1600 GAAACUCAAAGGAAUUGACGGGGGCCC-GCACA-------AUCAGU|GGA chl.C.moew 1650 UUAUGUGGUUUAAUUCG-(AUGCAACG)CGAAGAACCUUACCAGGGUUUG chl.C.moew 1700 ACA----UG|-CU-CAA--AA------AGACUCA-----(GAA-A-)UGG chl.C.moew 1750 GU-AAG---UG--CCA--------(gaaa------)--------UGGAA- chl.C.moew 1800 ---------------|UUGAGACA|C|AGGUGGUGCAUG|GCU|GUCGUC chl.C.moew 1850 A|-G-CUCGU|GCG(UUGA)CGUGUAUGG(UUAAGU)CCUGCAACGAGCG chl.C.moew 1900 CAACCCUCG|UCCACA-G-U------------------------------ chl.C.moew 1950 -------------------------------------------------- chl.C.moew 2000 -------------------------------------------------- chl.C.moew 2050 -----------------------------(--uaaauu--)--------- chl.C.moew 2100 |----CUCUGUGGAUACUGCCGGU(G-CAA----)--------------- chl.C.moew 2150 ---------ACUGGAGGAAGGUGAGGAUGACGUC-AA--GUCAGCAUGCC chl.C.moew 2200 CCUUACACCCUGGGCGAC-ACACGUAAUACAAUGGU--UGGGACAAUCAG chl.C.moew 2250 UA----GCUUAGCU--------------------(----GCGA-)----- chl.C.moew 2300 --------------AGUU-UGGCAAAUC-UGAG-AAACUCAACCUCAGUU chl.C.moew 2350 CGGAUUGCAGGC(--UGCAACUC)GCCUGCAUGAAGUCGGAAUUGAU--- chl.C.moew 2400 ---AGUAAU-CGCCAA(UC--AGCCAU)GUGGCGGUGAAUAC--GUU--- chl.C.moew 2450 -----------------CCCGGGCCUUGUACAAACCGCCCGUCACACCAA chl.C.moew 2500 GAAAGAUUG-UAGUCGGCAAAAUCCUU---AGCUU-AACC-(-----gaa chl.C.moew 2550 a------)-GG-AGG-GCG-GG-GCUU-ACCC-UAUUACCAUUGAUCAUG chl.C.moew 2600 GUGAAGUCGUAACAAGGUAGGGGUUCU(GGAA)GGAGUCCCUGGAUCACC chl.C.moew 2650 UCCUUCA-|~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ chl.C.moew 2700 ~~~~~~~~~~~~~~~~| chl.C.pall 0 |---------nnnnnnnnnnnnG-UU(U-GA)UCCU|GGCUCAGGAUGAA chl.C.pall 50 CGC-UGGCGGCAUGCUU--AACACAUGCAAGUCGAACG|AU--------- chl.C.pall 100 -uu-ucuuuau(uu------------------uu------)auaaagg-- chl.C.pall 150 -aau------------gu--AGU--GGCGCACGGGUGCGUAA-CGCGUAA chl.C.pall 200 GA-ACUUAC-CUUU------------------------------------ chl.C.pall 250 -------------------------------------------------C chl.C.pall 300 GGA---------GGGGGAUAACAU------------------------UG chl.C.pall 350 G(GAAA)CCG-CUGCUAAUACC-CCGU-AA-------------------- chl.C.pall 400 -------C----------GCU-------(GAGA---)-------AGU--- chl.C.pall 450 ---GAAA-----------------------gguc------------(--- chl.C.pall 500 -------uuag------)---------|---gaccGCCGAAAGA-GGG|G chl.C.pall 550 -CUUGCGU|-CUGAUUA-GCUAGUUGGUGG-AG-G-UAACGG)-CUCCCC chl.C.pall 600 AA|GGCCACGAU|CAGUAGCUG|GUCU(GAGA)GGAUGAUCAGC|CACAC chl.C.pall 650 UGGGA(CUGAGACACG)GCCCAGA-C--UCC(UA-CG)GG-A--GGCAG- chl.C.pall 700 CAGUGAGG-AAUUUUCCA-CAAU-GGGC-(-GAAA)-GCCU-GAUGGA|G chl.C.pall 750 CAAUGCCGCGUGGAGGAAGAAGGCC(---CGUG--)GG-UC--GUAAACU chl.C.pall 800 CC|UUUU-CUCAGAGAAGAAGA--------(--------)--------uC chl.C.pall 850 UGACG|GU-AUCU-GAGGAA-UAAGCCCC|GGCU+AACU-CUGUG(CCA- chl.C.pall 900 -GCAGCC|GCGGU---AA-)UACAGAG|GGGGCAAGCGUUAU-CCGGAAU chl.C.pall 950 GAUUGGGC|GUAAAGCGUUCGUAGGUG|GCUCGUGAAG-|UCU-ACUGUC chl.C.pall 1000 AAAAAUCAGGGC(------------------------------------- chl.C.pall 1050 ---------------------------------UCA)ACCUUGA-GC-AG chl.C.pall 1100 GCAGU--GGA-AAC-U|CAU-GA-G-CUUGAG-UG|CGGUA-----GAGG chl.C.pall 1150 UAGAG|GGAACUCUUUA-UGGAGCG(GUGAAA)UGCGUAGAGA---UAAG chl.C.pall 1200 GAGGAACACCAGC---GGC(GAAG)GC|G|CUCUA-CUG|GGCCG--A-- chl.C.pall 1250 -------------------------------------------------- chl.C.pall 1300 ----------GACUGACACU|GAG-GGACGAAAGCUAAGGGAGCGAAUAG chl.C.pall 1350 G(AUU-A-GAUAC)-CCUAGUAG-|UC-UUA-GCUGUAAACGAUGGAA-- chl.C.pall 1400 --AC|UA|AGUG-CUGC---------------------(--------cga chl.C.pall 1450 aa---)-------------------------------------------- chl.C.pall 1500 |------------------------------|----GCAGUGCU-GUAGC chl.C.pall 1550 (UAAC)GCGU-UAAGUUUCC|C|GCCUGGGGAGUAUGCUC(GCAA)GAGU chl.C.pall 1600 GAAACUCAAAGGAAUUGACGGGGGCCC-GCACA-------AGAGGU|GGA chl.C.pall 1650 UUAUGUGGAUUAAUUCG-(AUGAUACA)CGAAGAACCUUACCAGGGUUUG chl.C.pall 1700 ACA----UG|-CC-AAG--AA------UCUCCUA-----(GAA-A-)UGG chl.C.pall 1750 GA-GAG---UG--CCU--------(GAAA------)--------AGGAA- chl.C.pall 1800 ---------------|CUUGGACA|C|AGGUGGUGCAUG|GCU|GUCGUC chl.C.pall 1850 A|-G-CUCGU|GAU(UUGA)AUUGUAUGG(UUAAGU)CCCAUAACGAGCG chl.C.pall 1900 CAACCCUUG|UCCUUA-U-U------------------------------ chl.C.pall 1950 -------------------------------------------------- chl.C.pall 2000 -------------------------------------------------- chl.C.pall 2050 -----------------------------(--uaaagaau)--------- chl.C.pall 2100 |----CUAUAAGGAGACUGCCAGC(u-agc----)--------------- chl.C.pall 2150 ---------GCUGGAGGAAGGUGAGGAUGACGUC-AA--GUCAGCAUGCC chl.C.pall 2200 CCUUACACCCUGGGCUUC-ACACGUAAUACAAUGGC--UAAGACAACCAG chl.C.pall 2250 AA----GCAAAACU--------------------(----GCGA-)----- chl.C.pall 2300 --------------AGU--GAGCGAAUC-UGUU-AAACUUAGCCUCAAUU chl.C.pall 2350 CGGAUUGUAGGC(--UGCAACUC)GACUACAUGAAGCCGGAAUCUCU--- chl.C.pall 2400 ---AGUAAU-CGUGGG(UC--AGCUAU)ACCACGGUGAAUAC--GUU--- chl.C.pall 2450 -----------------CCCGGGCCUUGUACACACCGCCCGUCACAGGCA chl.C.pall 2500 GAAAGCGGA-UUUGUCUCUAAACAAUG---AGUCC-AACCc(cuga-uuu chl.C.pall 2550 u--ucag)gGG-AGG-AUA-GU-UGCU-AAAG-AUGAGUCUGUGAAUUAU chl.C.pall 2600 CUGAAGUCGUAACAAGGUAGGGnnnnn(nnnn)nnnnnnnnnnnnnnnnn chl.C.pall 2650 nnnnnn--|~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ chl.C.pall 2700 ~~~~~~~~~~~~~~~~| chl.C.rein 0 |----------AUCCAUGGAGAG-UU(U-GA)UCCU|GGCUCAGGACGAA chl.C.rein 50 CGC-UGGCGGCAUGCUU--AACACAUGCAAGUCGAACG|AG--------- chl.C.rein 100 -------caaa(gc------------------aa------)uuug----- chl.C.rein 150 ----------------ugu-AGU--GGCGAACGGGUGCGUAA-CGCGUAA chl.C.rein 200 GA-ACCUAC-CUAU------------------------------------ chl.C.rein 250 -------------------------------------------------C chl.C.rein 300 GGA---------GGGGGAUAACAU------------------------UG chl.C.rein 350 G(GAAA)CUG-UUGCUAAUACC-CCAU-AC-------------------- chl.C.rein 400 -------A----------GCU-------(GAGG---)-------AGU--- chl.C.rein 450 ---GAAA-----------------------GGU-------------(--- chl.C.rein 500 -----G-AAAa------)---------|----ACCgCCGAUAGA-GGG|G chl.C.rein 550 -CUUGCGU|-CUGAUUA-GCUAGUUGGUGG-GG(G-UAACGG)-CCUCCC chl.C.rein 600 AA|GGCCACGAG|CAGUAGCUG|GUCU(GAGA)GGAUGAUCAGC|CACAC chl.C.rein 650 UGGGA(CUGAGACACG)GCCCAGA-C--UCC(UA-CG)GG-A--GGCAG- chl.C.rein 700 CAGUGAGG-AAUUUUUCG-CAAU-GGGC-(-GCAA)-GC---GACGGA|G chl.C.rein 750 CAAUGCCGCGUGCAGGAAGAAGGCC(---UGUG--)GG-UC--GUAAACU chl.C.rein 800 GC|UUUU-CUCAGAGAAGAAG---------(---UUC--)---------- chl.C.rein 850 UGACG|GU-AUCU-GAGGAA-UAAGCACC|GGCU-AACU-CUGUG(CCA- chl.C.rein 900 -GCAGCC|GCGGU---AA-)UACAGAG|GGUGCAAGCGUUGU-CCGGAAU chl.C.rein 950 GAUUGGGC|GUAAAGCGUCUGUAGGUG|GCUCGUAAAG-|UCU-AAUGUC chl.C.rein 1000 AAAUACCAGGGC(------------------------------------- chl.C.rein 1050 ---------------------------------UCA)ACCUUGG-AC-CG chl.C.rein 1100 GCAUU--GGAGUAC-U|CAC-GA-G-CUUGAG-UA|CGGUA-----GGGG chl.C.rein 1150 CAGAG|GGAAUUCCAUG-UGGAGCG(GUGAAA)UGCGUAGAGA---UAUG chl.C.rein 1200 GAGGAACACCAGU---GGC(GAAG)GC|G|CUCUG-CUG|GGCCG--A-- chl.C.rein 1250 -------------------------------------------------- chl.C.rein 1300 ----------AACUGACACU|GAG-AGACGAAAGCUGGGGGAGCGAAUAG chl.C.rein 1350 G(AUU-A-GAUAC)-CCUAGUAG-|UC-CCA-GCCGUAAACUAUGGAG-- chl.C.rein 1400 --AC|UA|AGUG-CUGC---------------------(--------cgc chl.C.rein 1450 aa---)-------------------------------------------- chl.C.rein 1500 |------------------------------|----GCAGUGCU-GUAGC chl.C.rein 1550 (UAAC)GCGU-UAAGUCUCC|C|GCCUGGGGAGUAUGCUC(GCAA)GAGU chl.C.rein 1600 GAAACUCAAAGGAAUUGACGGG-ACC--GCACA-------AGCGGU|GGA chl.C.rein 1650 UUAUGUGGAUUAAUUCG-(AUACAACG)CGAAGAACCUUACCAGGGUUUG chl.C.rein 1700 ACA----UG|-UC-AAG--AA------CCUCUCA-----(GAA-A-)UGG chl.C.rein 1750 GA-GGG---UG--CC---------(CUAA------)---------cGGA- chl.C.rein 1800 ---------------|CUUGAACA|C|AGGUGGUGCAUG|GCU|GUCGUC chl.C.rein 1850 A|-G-CUCGU|GCU(GUGA)AGUGUAUAG(UUAAGU)CUCAUAACGAGCG chl.C.rein 1900 CAACCCUCG|UCUUUA-G-UUGCC-------------------------- chl.C.rein 1950 -------------------------------------------------- chl.C.rein 2000 -------------------------------------------------- chl.C.rein 2050 -----------------------------(--auuu----)--------- chl.C.rein 2100 |GGUUCUCUAAAGAGACUGCCAGU(G-UAA----)--------------- chl.C.rein 2150 ---------GCUGGAGGAAGGUGAGGAUGACGUC-AA--GUCAGCAUGCC chl.C.rein 2200 CCUUACAUCCUGGGCUUC-ACACGUAAUACAAUGGU--UGGGACAAUCAG chl.C.rein 2250 AA----GCGA-CUC--------------------(----GUGA-)----- chl.C.rein 2300 --------------GAGC-UAGCGGCUC-UGUU-AAACCCAACCUCAGUU chl.C.rein 2350 CGGAUUGUAGGC(--UGCAACUC)GCCUACAUGAAGCCGGAAUCGCU--- chl.C.rein 2400 ---AGUAAU-CGCCAG(UC--AGCuAU)AUGGCGGUGAAUAC--GUU--- chl.C.rein 2450 -----------------CCCGGGUCUUGUACACACCGCCCGUCACACCAU chl.C.rein 2500 GGAAGCUGG-UUCUGCUCCAAGUCGUU---ACCCU-AACC-(-----uuc chl.C.rein 2550 g------)-GG-AGG-GGG-GC-GCCU-AAAG-CAGGGCUAGUGACUAGG chl.C.rein 2600 GUGAAGUCGUAACAAGGUAGGGCUACU(GGAA)GGUGGCCCUGGCUCACC chl.C.rein 2650 UCCUUC--|~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ chl.C.rein 2700 ~~~~~~~~~~~~~~~~| chl.M.squa 0 |---------UGCCUGCAGAGAG-UU(Y-GA)UCCU|GGCUCAGGAGGAA chl.M.squa 50 CGC-UGGCAGCGUGCAU--AACACAUGCAAGUCGAACG|A---------- chl.M.squa 100 uga-aagauuc(uu------------------cgg-----)gaauuug-- chl.M.squa 150 -ga-------------ag--aGU--GGCGAACGGGUGAGGAA-CACGUAA chl.M.squa 200 GA-AUCUGC-CCCU------------------------------------ chl.M.squa 250 -------------------------------------------------C chl.M.squa 300 GGU---------CGGGGACAACUC------------------------UU chl.M.squa 350 G(GAAA)CGA-GAGCUAAUACC-CGAU-AU-------------------- chl.M.squa 400 ------------------GCU-------(GUGG---)-------AGU--- chl.M.squa 450 ---GAAA-----------------------ga--------------(--- chl.M.squa 500 -------auu-------)---------|-----UCGCCGAGGGA-UGA|U chl.M.squa 550 -CUUGCGU|-CUGAUUA-GCUAGUUGG-UG-UG(G-UAAUGG)-CAUACC chl.M.squa 600 AA|GGCGACGAU|CAGUAGCUG|GUCU(GAGA)GGAUGAACAGC|CACAU chl.M.squa 650 UGGAA(CUGAGACACG)GUCCAAA-C--UCC(UA-CG)GG-A--GGCAG- chl.M.squa 700 CAGUGGGG-AAUUUUCCG-CAAU-GGAC-(-GAAA)-GUCU-GACGGA|G chl.M.squa 750 CGACGCUGCGUGAAGGAUGACGGCC(---CGCG--)GG-UU--GUAAACU chl.M.squa 800 UC|UUUU-CUCGAAGAAGAAUC--------(--------)--------AA chl.M.squa 850 UGACG|GU-AUUC-GAGGAA-UAAGCAUC|GGCU-AACU-CCGUG(CCA- chl.M.squa 900 -GCAGCC|GCGGU---AA-)GACGGAG|GAUGCAAGUGUUAU-UCGGAAU chl.M.squa 950 GAUUGGGC|GUAAAGAGUCUGUAGGCG|GUAUAGAAAG-|UCU-UUUGUU chl.M.squa 1000 AAAUGCCUCGGC(------------------------------------- chl.M.squa 1050 ---------------------------------UCA)ACCGAGA-UC-CA chl.M.squa 1100 GCAAA--GGA-AAC-U|UCU-AU-A-CUUGAG-GA|AAGUA-----GAGG chl.M.squa 1150 UACAG|GGAAUUCCCGG-UGGAGCG(GUGAAA)UGCGUAGAUA---UCGG chl.M.squa 1200 GAGGAACACCAAUau-GGC(GAAG)GC|A|CUGUA-CUG|GGCuu--u-- chl.M.squa 1250 -------------------------------------------------- chl.M.squa 1300 ----------UCCUGACGCU|AAG-AGACGAAAGCUAAAGGAGUGAUUAG chl.M.squa 1350 G(AUU-A-GAUAC)-CCUAGUAA-|UU-UUA-GCCGUAAACGAUGGAA-- chl.M.squa 1400 --AC|U----ca-cugc-cg----------------ag(-------cgaa chl.M.squa 1450 auaca)a------------------------------------------- chl.M.squa 1500 |------------------------------|-cgagcgguggu-CAAGC chl.M.squa 1550 (UAAC)GCGU-GAAGUUUCC|C|GCCUGGGGAUUACGCUU(GCAA)AAGU chl.M.squa 1600 GAAACUCAAAGGAAUUGACGGGGACCC-GCACA-------AGCGGU|GGA chl.M.squa 1650 GUAUGUGGUUUAAUUCG-(AUGCAACA)CGAAGAACCUUACCAGGGUUUG chl.M.squa 1700 AAA----UC|-AU-UUC--AAa-----aCUCCUU-----(GAA-A-)GAG chl.M.squa 1750 GA-Gc----cu--cc---------(UUCG------)---------GGAU- chl.M.squa 1800 ---------------|GGAAU-GA|C|AGGUGGUGCAUG|GCU|GUCGUC chl.M.squa 1850 A|-G-CUCGU|GUU(GUGA)AAUGUCGAG(UUAAGU)CUCGUAACGAGCG chl.M.squa 1900 CAACCCAUG|UCUCUU-G-UUGCU-------------------------- chl.M.squa 1950 -------------------------------------------------- chl.M.squa 2000 -------------------------------------------------- chl.M.squa 2050 -----------------------------(-----cacug)--------- chl.M.squa 2100 |AGUGCUUAAGAGAGACUGCCGAc-caaca-------------------- chl.M.squa 2150 ----------UCGGAGGAAGGUGUGGAUGAUGUC-AA--GUCAGCAUGCC chl.M.squa 2200 CCUUACAUCCUGGGCUAC-ACACGUACUACAAUGGU--AAGGACAAUGAG chl.M.squa 2250 Cu----gcgauccu--------------------(----GCGA-)----- chl.M.squa 2300 --------------AGGC-UAGCCAAUC-UCAA-AAACCUUAUCUCAGUU chl.M.squa 2350 CGGAUUGCACUC(--UGCAACUC)GAGUGCAUGAAGGUGGAAUCGCU--- chl.M.squa 2400 ---AGUAAU-CGCUGG(UC--AGCUAU)ACAGCGGUGAAUAC--GUU--- chl.M.squa 2450 -----------------CCCGGGUCUUGUACACACUGCCCGUCACACCAU chl.M.squa 2500 GGAAGUCGA-CUCUUCCCUAAGUCGUU---ACUCG-AACC-(---c-auu chl.M.squa 2550 g------)-GG-ACG-AGG-AU-GCCG-AAGG-CAGGGUUGGUGACUGGG chl.M.squa 2600 GUGAAGUCGUAACAAGGUAGCCGUACU(GGAA)GGUGUGGCUGGAAUACC chl.M.squa 2650 UCCUUU--|~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ chl.M.squa 2700 ~~~~~~~~~~~~~~~~| chl.C.ke.1 0 |---------UGCCUGCAGAGAG-UU(Y-GA)UCCU|GGCUCAGGAUGAA chl.C.ke.1 50 CGC-UGGCGGCAUGCUU--AACACAUGCAAGUCGAACG|AA-------ug chl.C.ke.1 100 guu-ucuucua(cu------------------ug------)uagaaga-- chl.C.ke.1 150 -aauuaa---------UG--AGU--GGCGGACGGGUGAGUAA-CACGUAA chl.C.ke.1 200 GA-ACCUGC-CUUU------------------------------------ chl.C.ke.1 250 -------------------------------------------------U chl.C.ke.1 300 GGA---------GAGGGACAACCA------------------------CU chl.C.ke.1 350 G(GAAA)CGG-UGGCUAAAACC-UCAU-AA-------------------- chl.C.ke.1 400 ------------------GCU-------(GAGA---)-------AGU--- chl.C.ke.1 450 ---GAAAA----------------------GAU-------------(--- chl.C.ke.1 500 -----G-AAAA------)---------|----AUCGCCAAGAGA-UGG|G chl.C.ke.1 550 -CUUGCGG|-CUGAUUA-GCUAGUUGG-UG-AG(G-UAAUGG)-CUUACC chl.C.ke.1 600 AA|GGCAAUGAU|CAGUAGCUG|GUCU(GAGA)GGAUGAUCAGC|CACAC chl.C.ke.1 650 UGGGA(CUGAGACACG)GCCCAGA-C--UCC(UA-CG)GG-A--GGCAG- chl.C.ke.1 700 CAGUGAGG-AAUUUUCCG-CAAU-GGGC-(-GAAA)-GCCU-GACGGA|G chl.C.ke.1 750 CAAUGCCGCGUGAAGGAUGAAGGCC(---UGUG--)GG-UU--GUAAACU chl.C.ke.1 800 UC|UUUU-CUCAGAGAAGAAAA--------(--------)--------AU chl.C.ke.1 850 UGACG|GU-AUCU-GAGGAA-UAAGCAUC|GGCU-AACU-CUGUG(CCA- chl.C.ke.1 900 -GCAGCC|GCGGU---AA-)GACAGAG|GAUGCAAGCGUUAU-CCGGAAU chl.C.ke.1 950 GAUUGGGC|GUAAAGCGUCUGUAGGUG|GUUUGACAAG-|UCU-CCUGUC chl.C.ke.1 1000 AAAGAUCAGGGC(------------------------------------- chl.C.ke.1 1050 ---------------------------------UUA)ACCCUGG-GC-CG chl.C.ke.1 1100 GCAGG--AGA-AAC-U|AUC-AG-G-CUAGAG-UU|CGGUA-----GGGG chl.C.ke.1 1150 CAGAG|GGAAUUCCCGG-UGGAGCG(GUGAAA)UGCGUAGAUA---UCGG chl.C.ke.1 1200 GAGGAACACCAAA---GGC(GAAA)GC|A|CUCUG-CUG|GGCCG--Auu chl.C.ke.1 1250 uuuuuuguuuuuuuuuguuuuuugaauccguucaaaaaacaaaaaagagu chl.C.ke.1 1300 ucaaaaaaagUACUGACACU|GAG-AGACGAAAGCGAGGGGAGCAAAUGG chl.C.ke.1 1350 G(AUU-A-GAUAC)-CCCAGUAG-|UC-CUC-GCCGUAAACGAUGGAU-- chl.C.ke.1 1400 --AC|UA|GGUG-UUGGGUG------------------(-------guuu chl.C.ke.1 1450 aaaa-)a------------------------------------------- chl.C.ke.1 1500 |------------------------------|-CAUUCAGUACC-GUAGC chl.C.ke.1 1550 (UCAC)GCGU-GAAGUAUCC|C|GCCUGGGGAGUAUGCUC(GCAA)GAGU chl.C.ke.1 1600 GAAACUCAAAGGAAUUGACGGGGGCCC-GCACA-------AGCGGU|GGA chl.C.ke.1 1650 GCAUGUGGUUUAAUUCG-(AUGCAACG)CGAAGAACCUUACCAGGGCUUG chl.C.ke.1 1700 ACA----UG|-CC-ACU--U-------UUUUCCU-----(GAA-A-)GGG chl.C.ke.1 1750 AA-AGu-ucuc--acuuuuuuagg(uuu-------)ccuaaaaaaguga- chl.C.ke.1 1800 -------------ag|GGUGGACA|C|AGGUGGUGCAUG|GCU|GUCGUC chl.C.ke.1 1850 A|-G-CUCGU|GUC(UUGA)GAUGUUGGG(UUAAGU)CCCGCAACGAGCG chl.C.ke.1 1900 CAACCCUUG|UUUUGA-G-UUGCCA-U----------------------- chl.C.ke.1 1950 -------------------------------------------------- chl.C.ke.1 2000 -------------------------------------------------- chl.C.ke.1 2050 -----------------------------(--uuuu----)--------- chl.C.ke.1 2100 |GGGAAACUCAAAAGACUGCCGGU(GAUAA----)--------------- chl.C.ke.1 2150 ---------GCCGGAGGAAGGUGAGGAUGACGUC-AA--GUCAGCAUGCC chl.C.ke.1 2200 CCUUACGUCCUGGGCGAC-ACACGUGCUACAAUGGC--CGGGACAAAGAG chl.C.ke.1 2250 AU----GCAAUCCC--------------------(----GCGA-)----- chl.C.ke.1 2300 --------------GGGU-UAGCCAACC-UCAA-AAACCCGGUCUCAGUU chl.C.ke.1 2350 CGGAUUGCAGGC(--UGCAACUC)GCCUGCAUGAAGUCGGAAUCGCU--- chl.C.ke.1 2400 ---AGUAAU-CGCCGG(UC--AGCCAU)ACGGCGGUGAAUAC--GUU--- chl.C.ke.1 2450 -----------------CCCGGGCCUUGUACACACCGCCCGUCACACCAU chl.C.ke.1 2500 GGGAGCUGG-CUAUGCCCAAAGUCGUU---ACCCC-AACCa(---a-cua chl.C.ke.1 2550 c------)uGG-AGG-GGG-AU-GCCU-AAGG-CAGGGCUAGUGACUGGG chl.C.ke.1 2600 GUGAAGUCGUAACAAGGUAGCCGUACU(GGAA)GGUGNGGNUGGAUCACC chl.C.ke.1 2650 UCCUUG--|~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ chl.C.ke.1 2700 ~~~~~~~~~~~~~~~~| chl.C.ke.2 0 |---------nnnnnnnnnnnnn-nn(n-nn)nnnn|nnnnCAGGAUGAA chl.C.ke.2 50 CGC-UGGCGGCAUGCUU--AACACAUGCAAGUCGAACG|AA-------ug chl.C.ke.2 100 guu-ucuucua(cu------------------ug------)uagaaga-- chl.C.ke.2 150 -aauuaa---------UG--AGU--GGCGCACGGGUGAGUAA-CACGUAA chl.C.ke.2 200 GA-ACCUGC-CUUU------------------------------------ chl.C.ke.2 250 -------------------------------------------------U chl.C.ke.2 300 GGA---------GAGGGACAACCA------------------------CU chl.C.ke.2 350 G(GAAA)CGG-UGGCUAAAACC-UCAU-AA-------------------- chl.C.ke.2 400 ------------------GCU-------(GAGA---)-------AGU--- chl.C.ke.2 450 ---GAAAA----------------------GAU-------------(--- chl.C.ke.2 500 -------GAAA------)---------|----AUCGCCAAGAGA-UGG|G chl.C.ke.2 550 -CUUGCGG|-CUGAUUA-GCUAGUUGG-UG-AG(G-UAAUGG)-CUUACC chl.C.ke.2 600 AA|GGCAAUGAU|CAGUAGCUG|GUCU(GAGA)GGAUGAUCAGC|CACAC chl.C.ke.2 650 UGGGA(CUGAGACACG)GCCCAGA-C--UCC(UA-CG)GG-A--GGCAG- chl.C.ke.2 700 CAGUGAGG-AAUUUUCCG-CAAU-GGGC-(-GAAA)-GCCU-GACGGA|G chl.C.ke.2 750 CAAUGCCGCGUGAAGGAUGAAGGCC(---UGUG--)GG-UU--GUAAACU chl.C.ke.2 800 UC|UUUU-CUCAGAGAAGAAAA--------(--------)--------AU chl.C.ke.2 850 UGACG|GU-AUCU-GAGGAA-UAAGCAUC|GGCU-AACU-CUGUG(CCA- chl.C.ke.2 900 -GCAGCC|GCGGU---AA-)GACAGAG|GAUGCAAGCGUUAU-CCGGAAU chl.C.ke.2 950 GAUUGGGC|GUAAAGCGUCUGUAGGUG|GUUUGACAAG-|UCU-CCUGUC chl.C.ke.2 1000 AAAGAUCAGGGC(------------------------------------- chl.C.ke.2 1050 ---------------------------------UUA)ACCCUGG-GC-CG chl.C.ke.2 1100 GCAGG--AGA-AAC-U|AUC-AG-G-CUAGAG-UU|CGGUA-----GGGG chl.C.ke.2 1150 CAGAG|GGAAUUCCCGG-UGGAGCG(GUGAAA)UGCGUAGAUA---UCGG chl.C.ke.2 1200 GAGGAACACCAAA---GGC(GAAA)GC|A|CUCUG-CUG|GGCCG--Auu chl.C.ke.2 1250 uuuuuuguuuuuuuuuguuuuuugaauccguucaaaaaauaaaaaagagu chl.C.ke.2 1300 ucaaaaaaagUACUGACACU|GAG-AGACGAAAGCGAGGGGAGCAAAUGG chl.C.ke.2 1350 G(AUU-A-GAUAC)-CCCAGUAG-|UC-CUC-GCCGUAAACGAUGGAU-- chl.C.ke.2 1400 --AC|UA|GGUG-UUGGGUG------------------(-------guuu chl.C.ke.2 1450 aaaa-)a------------------------------------------- chl.C.ke.2 1500 |------------------------------|-CAUUCAGUACC-GUAGC chl.C.ke.2 1550 (UAUC)GCGU-GAAGUAUCC|C|GCCUGGGGAGUAUGCUC(GCAA)GAGU chl.C.ke.2 1600 GAAACUCAAAGGAAUUGACGGGGGCCC-GCACA-------AGCGGU|GGA chl.C.ke.2 1650 GCAUGUGGUUUAAUUCG-(AUGCAACG)CGAAGAACCUUACCAGGGCUUG chl.C.ke.2 1700 ACA----UG|-CA-CUU----------UUUUCCU-----(GAA-A-)GGG chl.C.ke.2 1750 AA-AGu-ucuc--acuuuuuuagg(uuu-------)nguaaaaaaguna- chl.C.ke.2 1800 -------------ag|GGUGGACA|C|AGGUGGUGCAUG|GCU|GUCGUC chl.C.ke.2 1850 A|-G-CUCGU|GUC(UUGA)GAUGUUGGG(UUAAGU)CCCGCAACGAGCG chl.C.ke.2 1900 CAACCCUUG|UUUUGA-G-UUGCCA-U----------------------- chl.C.ke.2 1950 -------------------------------------------------- chl.C.ke.2 2000 -------------------------------------------------- chl.C.ke.2 2050 -----------------------------(--uuuu----)--------- chl.C.ke.2 2100 |GGGAAACUCAAAAGACUGCCGGU(GAUAA----)--------------- chl.C.ke.2 2150 ---------GCCGGAGGAAGGUGAGGAUGACGUC-AA--GUCAGCAUGCC chl.C.ke.2 2200 CCUUACGUCCUGGGCGAC-ACACGUGCUACAAUGGC--CGGGACAAAGAG chl.C.ke.2 2250 AU----GCAAUCCC--------------------(----UCGA-)----- chl.C.ke.2 2300 --------------GGGU-UAGCCAACC-UCAA-AAACCCGGUCUCAGUU chl.C.ke.2 2350 CGGAUUGCAGGC(--UGCAACUC)GCCUGCAUGAAGUCGGAAUCGCU--- chl.C.ke.2 2400 ---AGUAAU-CGCCGU(UC--AGC-AU)ACGGCGGUGAAUAC--GUU--- chl.C.ke.2 2450 -----------------CCCGGGCCUUGUACACACCGCCCGUCACACCAU chl.C.ke.2 2500 GGGAGCUGG-CUAUGCCCAAAGUCGUU---ACCCC-AACCa(---a-cua chl.C.ke.2 2550 c------)uGG-AGG-GGG-AU-GCCU-AAGG-CAGGGCUAGUGACUGGG chl.C.ke.2 2600 GUGAAGUCGUAACAAGGUAGCCGUACU(GGAA)GGUGCnnnnnnnnnnnn chl.C.ke.2 2650 nnnnnn--|~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ chl.C.ke.2 2700 ~~~~~~~~~~~~~~~~| chl.C.frag 0 |---------UUGAAAUGGAGAGGUU(U-GA)UCCU|GGCUCAGGAUGAA chl.C.frag 50 CGC-UGGCGAUAUGCUU--AACACAUGCAAGUCGAACG|AA----uauua chl.C.frag 100 agu-uuucuua(aa------------------uu------)uguagaa-- chl.C.frag 150 -auuuaaua-------UU--AGU--GGCGAACGGGUGAGUAA-CGCGUAA chl.C.frag 200 GA-AUCUGC-UUUU------------------------------------ chl.C.frag 250 -------------------------------------------------G chl.C.frag 300 GGU---------AAAGAAUAACAA------------------------UU chl.C.frag 350 G(GAAA)CGA-UUGCUAAUACU-UUAU-AG-------------------- chl.C.frag 400 ------------------GCU-------(GAGG---)-------AGU--- chl.C.frag 450 ---UAAA-----------------------GG--------------(--- chl.C.frag 500 --uuuu-auuu------)---------|-----CCGCCCAGAAA-UGA|G chl.C.frag 550 -CUUGCGU|-CUGAUUA-GCUAGUUGG-UA-AG(A-UAAAAG)-CUUACC chl.C.frag 600 AA|GGCAAUGAU|CAGUAGUUG|GUCU(GAGA)GGAUGAUCAAC|CACAC chl.C.frag 650 UGGGA(CUGAGAUACG)GCCCAGA-C--CUU(UA-CG)GA-G--GGCAG- chl.C.frag 700 CAGUGAGG-AAUUUUCCG-CAAU-GGGC-(-GAAA)-GCCU-GACGGA|G chl.C.frag 750 CAAUAUCGCGUGAAGGAUGACGGCC(---UGUG--)GG-UU--GUAAACU chl.C.frag 800 UC|UUUU-CUUAAGAAAGAA----------(---UUC--)---------- chl.C.frag 850 UGACG|GU-ACUU-AAGGAA-UAAGCAUC|GGCU-AACU-CCGUG(CCA- chl.C.frag 900 -GCAGCC|GCGGU---AA-)UACGGAG|GAUGCAAGCGUUAU-CCGAAAU chl.C.frag 950 UAUUGGGC|GUAAAGAGUUUGUAGGUG|GUUUUUUAAG-|UCU-ACUGUU chl.C.frag 1000 AAAUAUCAGAGC(------------------------------------- chl.C.frag 1050 ---------------------------------UUA)ACUUUGA-AC-AA chl.C.frag 1100 GCAGU-AUGA-AAC-U|AAU-UA-A-CUUGAG-UU|UGGUA-----GAGG chl.C.frag 1150 CAGAG|GGAACUCUCGA-UGUAGUG(GUGAAA)UACGUAGAUA---UCGG chl.C.frag 1200 GGGGAACACCAGU---AGC(GAAA)GC|G|CUCUG-CUG|GGCCA--U-- chl.C.frag 1250 -------------------------------------------------- chl.C.frag 1300 ----------AACUGACACU|GAG-AAACGAAAGCUAGGGGAGCAAAUAG chl.C.frag 1350 G(AUU-A-GAUAC)-CCUAGUAG-|UC-CUA-GCUGUAAACGAUGGAU-- chl.C.frag 1400 --AC|UA|AGUA-UUGGGCUU-----------------(--------uuu chl.C.frag 1450 g----)-------------------------------------------- chl.C.frag 1500 |------------------------------|AAGUUCAGUGUU-GAAGC chl.C.frag 1550 (UAAC)GCGU-UAAGUAUCC|C|GCCUGGGGAGUACGUUC(GCAA)GAAU chl.C.frag 1600 GAAACUCAAAGGAAUUGACGGGGGCCC-GCACA-------AGCGGU|GGA chl.C.frag 1650 GCAUGUGGUUUAAUUCG-(AUGCAACG)CGAAGAACCUUACCAGGAAUUG chl.C.frag 1700 ACA----UA|-CU-CGU--UG-----GUUUUUUA-----(GAA-A-)UAA chl.C.frag 1750 AA-AAC---u--------------(guu-------)------------a- chl.C.frag 1800 ---------------|AAGAGAUA|C|AGGUGGUGCAUG|GCU|GUCGUC chl.C.frag 1850 A|-G-CUCGU|GUC(GUGA)GAUGUUGGG(UUAAGU)CCCGCAACGAGCG chl.C.frag 1900 CAACCCUUG|UCUUUA-G-U------------------------------ chl.C.frag 1950 -------------------------------------------------- chl.C.frag 2000 -------------------------------------------------- chl.C.frag 2050 -----------------------------(--uguu----)--------- chl.C.frag 2100 |----AUCUAGAGAGACUGCCGGU(GAUAA----)--------------- chl.C.frag 2150 ---------ACCGGAGGAAGGUGAGGAUGACGUC-AA--GUCAGCAUGCC chl.C.frag 2200 CCUUAAGUCCUGGGCGAC-ACACGUGCUACAAUGGU--AUAGACAAAGGG chl.C.frag 2250 AA----GCAAAUCU--------------------(----GCGA-)----- chl.C.frag 2300 --------------AGAG-UAGCAAAUC-UCAA-AAACUAUAUCUCAGUU chl.C.frag 2350 CGGAUUGCAGGC(--UGCAACUC)GCCUGCAUGAAGUCGGAAUCGCU--- chl.C.frag 2400 ---AGUAAU-CGCUGG(UC--AGCCAU)ACAGCGGUGAAUAU--GUU--- chl.C.frag 2450 -----------------CUCGGGCCUUGUACACACCGCCCAUCACGCUCG chl.C.frag 2500 AGAAAUUGG-AAAUACCCAAAGUCAUC---AUUCU-AACCa(--ua-uuu chl.C.frag 2550 uu-----)uGG-AAG-AUA-AU-GCCA-AAGG-UAGAGCUAGUGACUCAA chl.C.frag 2600 GCGAAGUUGUAACAAGGUAACCGUACU(GGAA)GGUGCGGUUGGAUCACC chl.C.frag 2650 UCCUUA--|~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ chl.C.frag 2700 ~~~~~~~~~~~~~~~~| (4)-Strept 0 | (4)-Strept 23 - (4)-Strept 85 -- (4)-Strept 88 - (4)-Strept 103 --------------------------------------------- (4)-Strept 148 - (4)-Strept 156 --------- (4)-Strept 173 -- (4)-Strept 178 ------------------- (4)-Strept 297 -- (4)-Strept 303 --------- (4)-Strept 316 -------- (4)-Strept 324 --------- (4)-Strept 345 --- (4)-Strept 354 -- (4)-Strept 360 - (4)-Strept 371 - (4)-Strept 375 - (4)-Strept 378 - (4)-Strept 380 --------------------------- (4)-Strept 412 - (4)-Strept 422 ---- (4)-Strept 426 -- (4)-Strept 438 ------ (4)-Strept 462 ------------------ (4)-Strept 491 - (4)-Strept 494 - (4)-Strept 499 - (4)-Strept 507 -- (4)-Strept 538 - (4)-Strept 544 - (4)-Strept 550 - (4)-Strept 569 -- (4)-Strept 581 - (4)-Strept 585 - (4)-Strept 606 ----- (4)-Strept 612 - (4)-Strept 618 | (4)-Strept 633 | (4)-Strept 639 | (4)-Strept 643 -- (4)-Strept 666 - (4)-Strept 677 - (4)-Strept 680 | (4)-Strept 684 - (4)-Strept 690 - (4)-Strept 692 -- (4)-Strept 698 --- (4)-Strept 715 - (4)-Strept 718 - (4)-Strept 730 - (4)-Strept 734 -------------------------------------- (4)-Strept 772 ---------------------- (4)-Strept 805 ------- (4)-Strept 822 - (4)-Strept 828 - (4)-Strept 830 | (4)-Strept 833 ----- (4)-Strept 841 ------------- (4)-Strept 854 -- (4)-Strept 866 - (4)-Strept 889 - (4)-Strept 899 --- (4)-Strept 907 - (4)-Strept 913 --- (4)-Strept 918 -| (4)-Strept 926 | (4)-Strept 931 - (4)-Strept 942 - (4)-Strept 958 | (4)-Strept 988 - (4)-Strept 990 | (4)-Strept 993 - (4)-Strept 1074 --------- (4)-Strept 1086 - (4)-Strept 1089 - (4)-Strept 1097 - (4)-Strept 1099 | (4)-Strept 1105 --- (4)-Strept 1116 - (4)-Strept 1120 - (4)-Strept 1123 - (4)-Strept 1125 ---- (4)-Strept 1131 |- (4)-Strept 1142 ---- (4)-Strept 1164 - (4)-Strept 1165 ------ (4)-Strept 1177 - (4)-Strept 1183 -------------------------------------|----- (4)-Strept 1226 -------------- (4)-Strept 1243 - (4)-Strept 1245 -- (4)-Strept 1299 ----------- (4)-Strept 1314 - (4)-Strept 1320 - (4)-Strept 1325 | (4)-Strept 1355 - (4)-Strept 1361 ------- (4)-Strept 1371 | (4)-Strept 1373 -- (4)-Strept 1383 - (4)-Strept 1387 - (4)-Strept 1398 ---- (4)-Strept 1404 - (4)-Strept 1412 - (4)-Strept 1415 - (4)-Strept 1421 - (4)-Strept 1427 --------------------- (4)-Strept 1452 --- (4)-Strept 1464 -- (4)-Strept 1467 -- (4)-Strept 1474 ---- (4)-Strept 1479 -- (4)-Strept 1483 -- (4)-Strept 1487 ------------ (4)-Strept 1499 --------------------------------- (4)-Strept 1536 ------------ (4)-Strept 1560 - (4)-Strept 1565 | (4)-Strept 1572 | (4)-Strept 1575 - (4)-Strept 1595 - (4)-Strept 1626 - (4)-Strept 1646 - (4)-Strept 1675 ------ (4)-Strept 1682 ------- (4)-Strept 1704 --- (4)-Strept 1709 | (4)-Strept 1713 - (4)-Strept 1721 ------ (4)-Strept 1736 --- (4)-Strept 1743 - (4)-Strept 1752 - (4)-Strept 1767 ------- (4)-Strept 1777 --------- (4)-Strept 1787 --- (4)-Strept 1790 ----- (4)-Strept 1802 ------------- (4)-Strept 1821 -- (4)-Strept 1824 | (4)-Strept 1832 --- (4)-Strept 1842 ---------- (4)-Strept 1865 -- (4)-Strept 1868 -- (4)-Strept 1871 -- (4)-Strept 1883 ---------- (4)-Strept 1893 ------ (4)-Strept 1901 - (4)-Strept 1916 - (4)-Strept 1924 - (4)-Strept 1937 - (4)-Strept 1939 -- (4)-Strept 1959 -------------------------------------- (4)-Strept 1997 -------------------------------------------------- (4)-Strept 2047 -------------------------------- (4)-Strept 2087 --- (4)-Strept 2093 -- (4)-Strept 2114 ||| (4)-Strept 2130 ---- (4)-Strept 2136 ------ (4)-Strept 2142 - (4)-Strept 2153 ------ (4)-Strept 2187 -- (4)-Strept 2218 - (4)-Strept 2237 - (4)-Strept 2253 --- (4)-Strept 2264 -------------------- (4)-Strept 2285 ---- (4)-Strept 2293 - (4)-Strept 2328 - (4)-Strept 2363 -- (4)-Strept 2397 ------ (4)-Strept 2420 - (4)-Strept 2443 - (4)-Strept 2448 ------------------- (4)-Strept 2527 --- (4)-Strept 2561 - (4)-Strept 2577 - (4)-Strept 2582 - (4)-Strept 2657 - (4)-Strept 2716 | chl.Cha.sp 0 |---------UGCCUGCAGAGAG-UU(Y-GA)UCCU|GGCUCAGGAUGAA chl.Cha.sp 50 CGC-UGGCGGCAUGCUU--AACACAUGCAAGUCGAACG|GAA-----uau chl.Cha.sp 100 auu-gauuggu(uu------------------ca------)aucaauc-- chl.Cha.sp 150 -aauaua---------UUC-AGU--GGCGGACGGGUGAGUAA-CGCGUAA chl.Cha.sp 200 GG-ACUUGC-CCUU------------------------------------ chl.Cha.sp 250 -------------------------------------------------G chl.Cha.sp 300 GGU---------GGGGGAUAACAA------------------------CU chl.Cha.sp 350 G(GAAA)CGG-CUGCUAAUACC-CCAU-AA-------------------- chl.Cha.sp 400 ------------------GCU-------(GAGG---)-------AGU--- chl.Cha.sp 450 ---AAAA-----------------------GGA-------------(--- chl.Cha.sp 500 -------ggaa------)---------|----UCCGCCCUAGGA-GAG|A chl.Cha.sp 550 -CUUGCGU|-CUGAUUA-GCUAGUUGG-UG-AG(G-UAAUCG)-CUUACC chl.Cha.sp 600 AA|GGCAACGAU|CAGUAGCUG|AUCU(GAGA)GGAUGAUCAGC|CACAC chl.Cha.sp 650 UGGGA(CUGAGACACG)GCCCAGA-C--UCC(UA-CG)GG-A--GGCAG- chl.Cha.sp 700 CAGUGGGG-AAUUUUCCG-CAAU-GGGC-(-GAAA)-GCCU-GACGGA|G chl.Cha.sp 750 CAAUGCCGCGUGGAGGUAGAAGGCC(----UAC--)GGGUC--GUAAACU chl.Cha.sp 800 CC|UUUU-UUCAGAGACGAAA---------(---Uca--)---------- chl.Cha.sp 850 UGAcG|GU-AUCU-GAAGAA-UAAGCAUC|GGCU-AACU-CUGUG(CCA- chl.Cha.sp 900 -GCAGCC|GCGGU---AA-)GACAGAG|GAUGCAAGCGUUAU-CCGGAAU chl.Cha.sp 950 GAUUGGGC|GUAAAGCGUCUGUAGGUG|GCUUUUUCAG-|UCU-GCUGUU chl.Cha.sp 1000 AAAAACUAGGGC(------------------------------------- chl.Cha.sp 1050 ---------------------------------UUA)ACCCUAG-AC-AG chl.Cha.sp 1100 GCAGC--AGA-AAC-U|ACU-AA-G-CUGGAG-UC|CGGUA-----GAGG chl.Cha.sp 1150 CAGAG|GGAAUUUCCGG-UGGAGCG(GUGAAA)UGCGUAGAUA---UCGG chl.Cha.sp 1200 AAAGAACGCCCAA---GGC(GAAA)GC|A|CUCUG-CUG|GGCCG--A-- chl.Cha.sp 1250 -------------------------------------------------- chl.Cha.sp 1300 ----------UACUGACACU|GAG-AGACGAAAGCUAGGGGAGCGAAUGG chl.Cha.sp 1350 G(AUU-A-GAUAC)-CCCAGUAG-|UC-CUA-GCUGUAAACGAUGGAC-- chl.Cha.sp 1400 --AC|UA|AGUG-CUGGAcg------------------(-------auuu chl.Cha.sp 1450 gauc-)-------------------------------------------- chl.Cha.sp 1500 |------------------------------|-CGUUCAGUGCU-GGAGC chl.Cha.sp 1550 (UAAC)GCGU-UAAGUGUCC|C|GCCUGGGGAGUACGCUC(GCAA)GAGU chl.Cha.sp 1600 GAAACUCAAAGGAAUUGACGGGGGCCC-GCACA-------AGCGGU|GGA chl.Cha.sp 1650 GCAUGUGGUUUAAUUCG-(AUGCAACG)CGAAGAACCUUACCAGGGUUUG chl.Cha.sp 1700 ACA----UA|-CU-GUG--AG------UCCCUCU-----(GAA-A-)AGA chl.Cha.sp 1750 GG-GAG---UG--CC---------(uucg------)---------GGAA- chl.Cha.sp 1800 ---------------|CACGGAUA|C|AGGUGGUGCAUG|GCU|GUCGUC chl.Cha.sp 1850 A|-G-CUCGU|GUC(GUGA)GAUGUUGGG(UUAAGU)CCCGCAACGAGCG chl.Cha.sp 1900 CAACCCUCG|UUUCUA-G-UUGCC-------------------------- chl.Cha.sp 1950 -------------------------------------------------- chl.Cha.sp 2000 -------------------------------------------------- chl.Cha.sp 2050 -----------------------------(--auuau---)--------- chl.Cha.sp 2100 |GGAACUCUAGAGAGACUGCCGGU(GAUAA----)--------------- chl.Cha.sp 2150 ---------UCCGGAGGAAGGUGAGGAUGACGUC-AA--GUCAGCAUGCC chl.Cha.sp 2200 CCUUACAUCCUGGGCGAC-ACACGUGCUACAAUGGC--CGGGACAAAGAG chl.Cha.sp 2250 UU----GCAACCCU--------------------(----GCGA-)----- chl.Cha.sp 2300 --------------AGGC-GAGCUAACC-U-CAAAAACCCGGUCUCAGUU chl.Cha.sp 2350 CGGAUUGCAGGC(--UGCAACUC)GCCUGCAUCAAGGCGGAAUCGCU--- chl.Cha.sp 2400 ---AGUAAU-CGCCGG(UC--AGCCAU)ACGGCGGUGAAUCC--GUU--- chl.Cha.sp 2450 -----------------CCCGGGCCUUGUACACACCGCCCGUCACACUAU chl.Cha.sp 2500 GGGAGCUGA-CCAUGCCCGAAGUCGUU---ACCCU-AACC-(uuaa-auu chl.Cha.sp 2550 acuuaa-)-GG-AGG-GGG-AU-GCCG-AAGG-CAGGGCUAGUGACUGGA chl.Cha.sp 2600 GUGAAGUCGUAACAAGGUAGCCGUACU(GGAA)GGUGNGGNUGGAUCACC chl.Cha.sp 2650 UCCUUG--|~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ chl.Cha.sp 2700 ~~~~~~~~~~~~~~~~| chl.C.orbi 0 |---------nnnnnnnnnnnnn-nn(n-nn)nnnn|nnnnnnnnnnnnn chl.C.orbi 50 nnC-UGGCGGCAUGCUU--AACACAUGCAAGUCGUACG|AG--------- chl.C.orbi 100 --------agg(cu------------------ugu-----)ccu------ chl.C.orbi 150 ----------------UU--AGU--GGCGGACGGGUGAGUAA-CGCGUAA chl.C.orbi 200 GU-ACUUAC-CCUU------------------------------------ chl.C.orbi 250 -------------------------------------------------A chl.C.orbi 300 GGU---------GGGGAACAACAG------------------------UU chl.C.orbi 350 G(GAAA)CGA-CUGCUAAUACC-GCAU-AU-------------------- chl.C.orbi 400 ------------------GCU-------(GAGG---)-------AGC--- chl.C.orbi 450 ---AAAA-----------------------AGA-------------(--- chl.C.orbi 500 -----g-gaa-------)---------|----UCUGCCUAGGGA-GGG|G chl.C.orbi 550 -CUUGCGU|-CUGAUUAUGCUAGUUGG-UG-AG(G-UAAUGG)-CUUACC chl.C.orbi 600 AA|GGCUACGAU|CAGUAGCUG|GUCU(GAGA)GGAUGAUCAGC|CACAC chl.C.orbi 650 UGGGA(CUGAGACACG)GCCCAGA-C--UCC(UA-CG)GG-A--GGCAG- chl.C.orbi 700 CAGUGGGG-AAUUUUCCG-CAAU-GGGC-(-GAAA)-GCCU-GACGGA|G chl.C.orbi 750 CAAUGCCGCGUGGAGGAAGAAAGCU(---UACG--)GG-UU--GUAAACU chl.C.orbi 800 CC|UUUU-CUCAGAGAAGAAAA--------(--------)--------AA chl.C.orbi 850 UGACG|GU-AUCU-GAGGAA-UAAGCAUC|GGCU-AACU-CUGUG(CCA- chl.C.orbi 900 -GCAGCC|GCGGU---AA-)UACAGAG|GAUGCAAGCGUUAU-CCGGAAU chl.C.orbi 950 GAUUGGGC|GUAAAGCGUCUGUAGGUU|GUUUAUUAAG-|UCC-GCUGUU chl.C.orbi 1000 AAAUCCCACGGC(------------------------------------- chl.C.orbi 1050 ---------------------------------UUA)ACCAUGG-AC-AG chl.C.orbi 1100 GCGGC--GGA-AAC-U|AUU-AA-A-CUAGAG-UA|CGGUA-----GGGG chl.C.orbi 1150 CAGAG|GGAAUUUCCGG-UGGAGCG(GUGAAA)UGCGUAGAUA---UCGG chl.C.orbi 1200 AAAGAACACCCAA---GGC(GAAG)GC|A|CUUUG-CUG|GGCCG--A-- chl.C.orbi 1250 -------------------------------------------------- chl.C.orbi 1300 ----------AACUGACACU|GAG-AGACGAAAGCUAGGGGAGCAAAUGG chl.C.orbi 1350 G(AUU-A-GAUAC)-CCCAGUAG-|UC-CUA-GCCGUAAACGAUGGAU-- chl.C.orbi 1400 --AC|UG|AGCG-CUGCGCG------------------(-------uauc chl.C.orbi 1450 aacc-)-------------------------------------------- chl.C.orbi 1500 |------------------------------|-CGUGCAGUGCU-UUAGC chl.C.orbi 1550 (UAAC)GCGU-UAAGUAUCC|C|GCCUGGGGAGUACGCUC(GAAA)GAGU chl.C.orbi 1600 GAAACUCAAAGGAAUUGACGGGGGCCC-GCACA-------AGCGGU|GGA chl.C.orbi 1650 GCAUGUGGUUUAAUUCG-(AUGCAACG)CGAAGAACCUUACCAGGGCUUG chl.C.orbi 1700 ACA----UG|-CC-ACG--AA------UCUUUUU-----(GAA-A-)GAA chl.C.orbi 1750 GA-GAG---UG--CC---------(UUUA------)---------GGAA- chl.C.orbi 1800 ---------------|CGUGGACA|C|AGGUGGUGCAUG|GCU|GUCGUC chl.C.orbi 1850 A|-G-CUCGU|GUC(GUGA)GAUGUUGGG(UUAAGU)CCCGCAACGAGCG chl.C.orbi 1900 CAACCCUUG|UAUCUA-G-UUGCCA-U----------------------- chl.C.orbi 1950 -------------------------------------------------- chl.C.orbi 2000 -------------------------------------------------- chl.C.orbi 2050 -----------------------------(ucaauuuauu)--------- chl.C.orbi 2100 |GGAACCCUAGAUAGACUGCCGGU(GAUAA----)--------------- chl.C.orbi 2150 ---------GCCGGAGGAAGGUGAGGAUGACGUC-AA--GUCAGCAUGCC chl.C.orbi 2200 CCUUACGCCCUGGGCGAC-ACACGUGCUACAAUGGC--CGGGACAAAGAG chl.C.orbi 2250 UU----GUAAUCCU--------------------(----GAGA-)----- chl.C.orbi 2300 --------------AGGC-UAACUAACC-UCAU-AAACCCGGUCUCAGUU chl.C.orbi 2350 CGGAUUGCAGGC(--UGCAACUC)GCCUGCAUGAAGCCGGAAUCGCU--- chl.C.orbi 2400 ---AGUAAU-CGCCGG(UC--AGCCAU)ACGGCGGUGAAUUC--GUU--- chl.C.orbi 2450 -----------------CCCGGGCCUUGUACACACCGCCCGUCACACUAU chl.C.orbi 2500 GGGAGUUGG-CCACGCCCGAAGUCGUU---ACUUU-AACC-(-----gua chl.C.orbi 2550 au-----)-GG-AGG-AGG-AU-GCCG-AAGG-CGAAGCUAGUGACUGGA chl.C.orbi 2600 GUGAAGUCGUAACAAGGUAGCCGUACU(GGAA)GGUGCGGCUGGAUCACC chl.C.orbi 2650 UCCUUU--|~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ chl.C.orbi 2700 ~~~~~~~~~~~~~~~~| chl.K.flac 0 |---------UGCCUGCAGAGAG-UU(Y-GA)UCCU|GGCUCAGGAUGAA chl.K.flac 50 CGC-UAGCGGUUUGCCU--AACACAUGCAAGUUGCACG|GCG-------- chl.K.flac 100 --c-caugccu(cu------------------cg------)aggaaug-- chl.K.flac 150 -g--------------CGG-AGU--GGCGGACGGGUGAGGAA-CGCGUAA chl.K.flac 200 GG-ACCUGC-CCCU------------------------------------ chl.K.flac 250 -------------------------------------------------G chl.K.flac 300 GGA---------GGGGGAUAACAG------------------------CU chl.K.flac 350 G(GAAA)CGG-CUGCUAAUACC-CCAU-AU-------------------- chl.K.flac 400 ------------------CCU-------(GAGG---)-------AGG--- chl.K.flac 450 ---GAAA-----------------------GGA-------------(--- chl.K.flac 500 -------gaga------)---------|----UCCGCCCAGGGA-GGG|G chl.K.flac 550 -CUUGCGU|-CUGAUUA-GCUAGUUGG-GG-GG(G-UAAUGG)-CCUCCC chl.K.flac 600 AA|GGCAACGAU|CAGUUGCUG|GUCU(GAGA)GGAUGAUCAGC|CACAC chl.K.flac 650 UGGGA(CUGAGACACG)GCCCAGA-C--UCC(UA-CG)GG-A--GGCAG- chl.K.flac 700 CAGUGAGG-AAUCUUCCG-CAAU-GGGC-(-GAAA)-GCCU-GACGGG|G chl.K.flac 750 CAAUGCCGCGUGGAGGAUGAAGGCC(--CAAUG--)GG-UC--GUAAACU chl.K.flac 800 UC|UUUAGAUCAGAGACGAAG---------(---Aga--)---------- chl.K.flac 850 UGAcG|GU-ACCU-GAAGAACUAAGCAUC|GGCUAAACC-CCGUG(CCA- chl.K.flac 900 -GCAGCC|GCGGU---AA-)GACGGGG|GAUGCGAGCGUUAU-CCGGAAU chl.K.flac 950 GAUUGGGC|GUAAAGGGUCCGCAGGUG|GCCCGGUCAG-|UCC-GCUGUC chl.K.flac 1000 AAAACCUGGGGC(------------------------------------- chl.K.flac 1050 ---------------------------------UCA)ACCCUGG-AG-AG chl.K.flac 1100 GCGGC--GGA-GAC-C|ACC-GG-G-CUUGAG-UC|CGGUA-----GGGG chl.K.flac 1150 CAGAG|GGAAUUCCCGG-UGGAGCG(GUGAAA)UGCGUAGAGA---UCGG chl.K.flac 1200 GAAGAACGCCAAG---GGC(GAAG)GC|A|CUCUG-CUA|GGCCU--Gau chl.K.flac 1250 uucgc--------------------------------------------- chl.K.flac 1300 ----------GACUGACACU|CAG-GGACGAGAGCCAGGGGAGCGAAUGG chl.K.flac 1350 G(AUU-A-GAUAC)-CCCAGUAG-|UC-CUG-GCCGUAAACGAUGGAU-- chl.K.flac 1400 --AC|CA|AGCC-CUGCGCG------------------(-------uauc chl.K.flac 1450 gacc-)-------------------------------------------- chl.K.flac 1500 |------------------------------|-CGGGCAGGGCU-GUAGC chl.K.flac 1550 (UAAC)GCAU-GAAGUAUCC|C|GCCUGGGGAGUACGCUC(GCAA)GAGU chl.K.flac 1600 GAAACUCAAAGGAAUUGACGGGAGCCC-GCACA-------AGCGGU|GGA chl.K.flac 1650 GCAUGUGGUUUAAUUCG-(AUGCAACG)CGAAGAACCUUACCAGGGCUUG chl.K.flac 1700 ACA----UG|-CC-GCG--AA------CCCCCCU-----(GAG-A-)GGG chl.K.flac 1750 GG-GGG---UG--CC---------(uucg------)---------GGAG- chl.K.flac 1800 ---------------|CGCGGACA|C|AGGUGGUGCAUG|GCU|GUCGUC chl.K.flac 1850 A|-G-CUCGU|GUC(GUAA)GAUGUUGGG(UUCAGU)CCCGCAACGAGCG chl.K.flac 1900 CAACCCCCG|UCUCUA-G-UUGCC-------------------------- chl.K.flac 1950 -------------------------------------------------- chl.K.flac 2000 -------------------------------------------------- chl.K.flac 2050 -----------------------------(cacaauuc--)--------- chl.K.flac 2100 |GGCACCCUAGAGAGACCGCCGGU(GUUAA----)--------------- chl.K.flac 2150 ---------GCCGGAGGAAGGUGGGGAUGAGGUC-AA--GUCAACAUGCC chl.K.flac 2200 CCUUUUGCCCUGGGCGAC-ACACGUGCUACAAUGGC--CGGGACAAAGAG chl.K.flac 2250 AU----GCGACCCC--------------------(----GCAA-)----- chl.K.flac 2300 --------------GGCC-AGCCUGACC-U-CGUAAACCCGGCCUCAGUU chl.K.flac 2350 CGGAUUGUAGGC(--UGCAACCC)GCCUACAUGAAGGAGGAAUCGCU--- chl.K.flac 2400 ---AGUAAU-CACCGG(UC--AGCCAU)ACGGUGGUGAAUCC--GUU--- chl.K.flac 2450 -----------------CCCGGGCUUUGCACACACCGCCCGUCACACUAU chl.K.flac 2500 GGGAAUCGG-CCAUGCCCCAAGUCGUU---ACCCC-AACC-(-----cgu chl.K.flac 2550 a------)-GG-GAG-GGG-GA-UGCC-AAAGGCAGGGCUGGUGACUAAA chl.K.flac 2600 GUGAAGUCGUAACAAGGUAGCCGUACU(GGAA)GGUGNGGNUGGAUCACC chl.K.flac 2650 UCCUUG--|~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ chl.K.flac 2700 ~~~~~~~~~~~~~~~~| chl.S.maxi 0 |----------UCUCAUGGAGAG-UU(U-GA)UCCU|GGCUCAGGAUGAA chl.S.maxi 50 CGC-UGGCGGCAUGCCU--AACACAUGCAAGUCGUACG|AA--------- chl.S.maxi 100 -----gguguu(gc------------------aa------)gacacc--- chl.S.maxi 150 ----------------UU--AGU--GGCGGACGGGUGAGUAA-CGCGUAA chl.S.maxi 200 GA-ACCUGC-CUUU------------------------------------ chl.S.maxi 250 -------------------------------------------------A chl.S.maxi 300 GGC---------GGGGGAUAACCA------------------------UU chl.S.maxi 350 G(GAAA)CGA-UGGCUAAUACC-CCAU-AU-------------------- chl.S.maxi 400 ------------------ACU-------(GAAG---)-------AGU--- chl.S.maxi 450 ---CAAA-----------------------GGA-------------(--- chl.S.maxi 500 -------ggaa------)---------|----UCCACCUAGAGA-GGG|G chl.S.maxi 550 -CUUGCGU|-CUGAUUA-GCUAGUUGG-UA-AG(G-UAAUGG)-CUUACC chl.S.maxi 600 AA|GGCAACGAU|CAGUAGCUG|GUCU(GAGA)GGAUGAUCAGC|CACAC chl.S.maxi 650 UGGGA(CUGAGACACG)GCCCAGA-C--UCC(UA-CG)GG-A--GGCAG- chl.S.maxi 700 CAGUGGGG-AAUUUUCCG-CAAU-GGGC-(-GAAA)-GCCU-GACGGA|G chl.S.maxi 750 CAAUGCCGCGUGGAGGAAGAAAGCC(---CAUG--)GG-UU--GUAAACU chl.S.maxi 800 CC|UUUU-GUCAGAGAAGAAAU--------(--------)--------AA chl.S.maxi 850 UGACG|GU-AUCU-GAAGAA-UAAGCAUC|GGCU-AACU-CUGUG(CCA- chl.S.maxi 900 -GCAGCC|GCGGU---AA-)GACAGAG|GAUGCAAGCGUUAU-CCGGAAU chl.S.maxi 950 GAUUGGGC|GUAAAGCGUCUGUAGGUU|GCUUUUUAAG-|UCC-AUUGUC chl.S.maxi 1000 AAAUCCCAGGGC(------------------------------------- chl.S.maxi 1050 ---------------------------------UUA)ACCCUGG-AC-AG chl.S.maxi 1100 GCAAU--GGA-GAC-U|ACU-AG-G-CUAGAG-UA|CGGUA-----GGGG chl.S.maxi 1150 CAGGG|GGAAUUUCCGG-UGGAGCG(GUGAAA)UGCGUAGAUA---UCGG chl.S.maxi 1200 AAAGAACACCAAC---GGC(GAAG)GC|A|CUCUG-CUG|GGCCG--A-- chl.S.maxi 1250 -------------------------------------------------- chl.S.maxi 1300 ----------AACUGACACU|GAG-AGACGAAAGCUAGGGGAGCGAAUGG chl.S.maxi 1350 G(AUU-A-GAUAC)-CCCAGUAG-|UC-CUA-GCCGUAAACGAUGGAU-- chl.S.maxi 1400 --AC|UA|AGCG-CUGUGCG------------------(-------uauu chl.S.maxi 1450 aacc-)-------------------------------------------- chl.S.maxi 1500 |------------------------------|-CGUGCAGUGUU-GUAGC chl.S.maxi 1550 (UAAC)GCGU-UAAGUAUCC|C|GCCUGGGGAGUACGCUC(GCAA)GAGU chl.S.maxi 1600 GAAACUCAAAGGAAUUGACGGGGGCCC-GCACA-------AGCGGU|GGA chl.S.maxi 1650 GCAUGUGGUUUAAUUCG-(AUGCAACG)CGAAGAACCUUACCAGGAAUUG chl.S.maxi 1700 ACA----UG|-CC-ACG--UA------UCUGCCU-----(GAA-A-)GGG chl.S.maxi 1750 UA-GAG---UU--CC---------(uuuua-----)---------GGAA- chl.S.maxi 1800 ---------------|CGUGGACA|C|AGGUGGUGCAUG|GCU|GUCGUC chl.S.maxi 1850 A|-G-CUCGU|GCC(GUGA)GGUGUUGGG(UUAAGU)CCCGCAACGAGCG chl.S.maxi 1900 CAACCCUCG|UGUUUA-G-UUGCC-------------------------- chl.S.maxi 1950 -------------------------------------------------- chl.S.maxi 2000 -------------------------------------------------- chl.S.maxi 2050 -----------------------------(---acaa---)--------- chl.S.maxi 2100 |GGAACCCUAAACAGACUGCCGGU(GAUAA----)--------------- chl.S.maxi 2150 ---------GCCGGAGGAAGGUGAGGAUGACGUC-AA--GUCAGCAUGCC chl.S.maxi 2200 CCUUACAUCCUGGGCGAC-ACACGUGCUACAAUGGU--UGAGACAAAGGG chl.S.maxi 2250 AU----GCCACCCC--------------------(----GUGA-)----- chl.S.maxi 2300 --------------GGGC-AAGCAAAUC-UCAA-AAACUCAAUCUCAGUU chl.S.maxi 2350 CGGAUUGCAGGC(--UGCAACUC)GCCUGCAUGAAGGCGGAAUCGCU--- chl.S.maxi 2400 ---AGUAAU-CGCCGG(UC--AGCCAU)ACGGCGGUGAAUCC--GUU--- chl.S.maxi 2450 -----------------CCCGGGCCUUGUACACACCGCCCGUCACACUAU chl.S.maxi 2500 GGGAGCUGG-UCAUGCCCGAAGUCGUU---CUCCU-AACC-(-----gug chl.S.maxi 2550 a------)-GG-AGG-GAA-AU-UCCG-AAGG-CAGGACUAGUGACUGGA chl.S.maxi 2600 GUGAAGUCGUAACAAGGUAGCCGUACU(GGAA)GGUGCGGCUGGAACACC chl.S.maxi 2650 UCCUUU--|~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ chl.S.maxi 2700 ~~~~~~~~~~~~~~~~| chl.S.palu 0 |---------nnnnnnnnnnnnn-nn(n-nn)nnnn|nnnnnnnnnnnnn chl.S.palu 50 nnC-UGGCGGCAUGCUU--AACACAUGCAAGUCGGACG|GG--------- chl.S.palu 100 ----aagcauc(cu------------------agu-----)gguguuu-- chl.S.palu 150 ----------------UC--AGU--GGCGGACGGGUGAGUAA-CGCGUAA chl.S.palu 200 GA-ACCUGC-CCUU------------------------------------ chl.S.palu 250 -------------------------------------------------G chl.S.palu 300 GGA---------GGGGGACAACAG------------------------CU chl.S.palu 350 G(GAAA)CGG-UUGCUAAUACC-CCAU-AG-------------------- chl.S.palu 400 ------------------GCU-------(GAGG---)-------AGC--- chl.S.palu 450 ---AAAA-----------------------GGA-------------(--- chl.S.palu 500 -------ggaa------)---------|----UCCGCCCAAGGA-GGG|G chl.S.palu 550 -CUUGCGU|-CUGAUUA-GCUAGUUGG-UG-AG(G-CAAUGG)-CUUACC chl.S.palu 600 AA|GGCGACGAU|CAGUAGCUG|GUCU(GAGA)GGAUGAUCAGC|CACAC chl.S.palu 650 UGGGA(CUGAGACACG)GCCCAGA-C--UCC(UA-CG)GG-A--GGCAG- chl.S.palu 700 CAGUGGGG-AAUUUUCCG-CAAU-GGGC-(-GAAA)-GCCU-GACGGA|G chl.S.palu 750 CAAUGCCGCGUGGAGGUAGAAGGCC(---CACG--)GG-UC--GUAAACU chl.S.palu 800 CC|UUUU-CUCAGAGAAGAAGC--------(--------)--------AA chl.S.palu 850 UGACG|GU-AUCU-GAGGAA-UAAGCAUC|GGCU-AACU-CUGUG(CCA- chl.S.palu 900 -GCAGCC|GCGGU---AA-)GACAGAG|GAUGCAAGCGUUAU-CCGGAAU chl.S.palu 950 GAUUGGGC|GUAAAGCGUCUGUAGGUG|GCUUCUUAAG-|UCC-GCCGUC chl.S.palu 1000 AAAUCCCAGGGC(------------------------------------- chl.S.palu 1050 ---------------------------------UCA)ACCCUGG-AC-AG chl.S.palu 1100 GCGGU--GGA-AAC-U|ACC-GA-G-CUGGAG-UA|CGGUA-----GGGG chl.S.palu 1150 CAGAG|GGAAUUUCCGG-UGGAGCG(GUGAAA)UGCGUAGAGA---UCGG chl.S.palu 1200 AAAGAACACCAAC---GGC(GAAA)GC|A|CUCUG-CUG|GGCCG--A-- chl.S.palu 1250 -------------------------------------------------- chl.S.palu 1300 ----------CACUGACACU|GAG-AGACGAAAGCUAGGGGAGCAAAUGG chl.S.palu 1350 G(AUU-A-GAUAC)-CCCAGUAG-|UC-CUA-GCCGUAAACGAUGGAU-- chl.S.palu 1400 --AC|UA|AGCG-CUGUGCG------------------(-------uauc chl.S.palu 1450 gacc-)-------------------------------------------- chl.S.palu 1500 |------------------------------|-CGUGCAGUGCU-GUAGC chl.S.palu 1550 (UAAC)GCGU-UAAGUAUCC|C|GCCUGGGGAGUACGUUC(GCAA)GAAU chl.S.palu 1600 GAAACUCAAAGGAAUUGACGGGGGCCC-GCACA-------AGCGGU|GGA chl.S.palu 1650 GCAUGUGGUUUAAUUCG-(AUGCAACG)CGAAGAACCUUACCAGGGCUUG chl.S.palu 1700 ACA----UG|-CC-GCG--AA------UCUUCUU-----(GAA-A-)GAG chl.S.palu 1750 AA-GAG---UG--CC---------(CUCG------)---------GGAA- chl.S.palu 1800 ---------------|CGCGGACA|C|AGGUGGUGCAUG|GCU|GUCGUC chl.S.palu 1850 A|-G-CUCGU|GCC(GUAA)GGUGUUGGG(UUAAGU)CCCGCAACGAGCG chl.S.palu 1900 CAACCCUCG|UGUUUA-G-UUGCCA-U----------------------- chl.S.palu 1950 -------------------------------------------------- chl.S.palu 2000 -------------------------------------------------- chl.S.palu 2050 -----------------------------(cauuuaguuu)--------- chl.S.palu 2100 |GGAACCCUAAACAGACUGCCGGU(GAUAA----)--------------- chl.S.palu 2150 ---------GCCGGAGGAAGGUGAGGAUGACGUC-AA--GUCAGCAUGCC chl.S.palu 2200 CCUUACGCCCUGGGCGAC-ACACGUGCUACAAUGGC--CGGGACAAAGGG chl.S.palu 2250 UC----GCGACCCC--------------------(----GCGA-)----- chl.S.palu 2300 --------------GGGC-AAGCUAACC-UCAA-AAACCCGGCCUCAGUU chl.S.palu 2350 CGGAUUGCAGGC(--UGCAACUC)GCCUGCAUGAAGCCGGAAUCGCU--- chl.S.palu 2400 ---AGUAAU-CGCCGG(UC--AGCCAU)ACGGCGGUGAACC---GUU--- chl.S.palu 2450 -----------------CCCGGGCCUUGUACACACCGCCCGUCACACUAU chl.S.palu 2500 GGGAGCUGG-CCAUGCCCGAAGUCGUU---ACCCU-AACC-(-----gua chl.S.palu 2550 a------)-GG-AGG-GGG-AU-GCCG-AAGG-CAGGGCUAGUGACUGGA chl.S.palu 2600 GUGAAGUCGUAACAAGGUAGCCGUACU(nnnn)nnnnnnnnnnnnnnnnn chl.S.palu 2650 nnnnnn--|~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ chl.S.palu 2700 ~~~~~~~~~~~~~~~~| chl.M.poly 0 |~~~~~~~~~~UCUCAUGGAGAG-UU(U-GA)UCCU|GGCUCAGGAUGAA chl.M.poly 50 CGC-UGGCGGCAUGCUU--AACACAUGCAAGUCGUACG|GG--------- chl.M.poly 100 ----aaggauc(cu------------------agu-----)gguguuu-- chl.M.poly 150 ----------------CC--AGU--GGCGGACGGGUGAGUAA-CGCGUAA chl.M.poly 200 GA-ACCUGC-CCUU------------------------------------ chl.M.poly 250 -------------------------------------------------G chl.M.poly 300 GGA---------GGGGGACAACAG------------------------CU chl.M.poly 350 G(GAAA)CGG-UUGCUAAUACC-CCAU-AG-------------------- chl.M.poly 400 ------------------GCU-------(GAGG---)-------AGC--- chl.M.poly 450 ---AAAA-----------------------GGA-------------(--- chl.M.poly 500 -------GGAA------)---------|----UCCGCCUAAGGA-GGG|G chl.M.poly 550 -CUUGCGU|-CUGAUUA-GCUAGUUGG-UG-AG(G-UAAUAG)-CUUACC chl.M.poly 600 AA|GGCGACGAU|CAGUAGCUG|GUCU(GAGA)GGAUGAUCAGC|CACAC chl.M.poly 650 UGGGA(CUGAGACACG)GCCCAGA-C--UCU(UA-CG)GG-A--GGCAG- chl.M.poly 700 CAGUGGGG-AAUUUUCCG-CAAU-GGGC-(-GAAA)--CGU-GACGGA|G chl.M.poly 750 CAAUGCCGCGUGGAGGUAGAAGGCU(---CACG--)GG-UC--GUAAACU chl.M.poly 800 CC|UUUU-CUCAGAGAAGAUGC--------(--------)--------AA chl.M.poly 850 UGACG|GU-AUCU-GAGGAA-UAAGCAUC|GGCU-AACU-CUGUG(CCA- chl.M.poly 900 -GCAGCC|GCGGU---AA-)GACAGAG|GAUGCAAGCGUUAU-CCGGAAU chl.M.poly 950 GAUUGGGC|GUAAAGCGUCUGUAGGUG|GCUUUUUAAG-|UCC-GCCGUC chl.M.poly 1000 AAAUCCCAGGGC(------------------------------------- chl.M.poly 1050 ---------------------------------UCA)ACCCUGG-AC-AG chl.M.poly 1100 GCGGU--GGA-AAC-U|ACC-AA-G-CUGGAG-UA|CGGUA-----GGGG chl.M.poly 1150 CAGAG|GGAAUUUCCGG-UGGAGCG(GUGAAA)UGCGUAGAGA---UCGG chl.M.poly 1200 AAAGAACACCAAU---GGC(GAAA)GC|A|CUCUU-CUG|GGCCG--A-- chl.M.poly 1250 -------------------------------------------------- chl.M.poly 1300 ----------CACUGACACU|GAG-AGACGAAAGCUAGGGGAGCAAAUGG chl.M.poly 1350 G(AUU-A-GAUAC)-CCCAGUAG-|UC-CUA-GCCGUAAACGAUGGAU-- chl.M.poly 1400 --AC|UA|AGCG-CUGUGC-------------------(-------uauc chl.M.poly 1450 gacc-)-------------------------------------------- chl.M.poly 1500 |------------------------------|-CGUGCAGUGCU-GUAGC chl.M.poly 1550 (UAAC)GCGU-UAAGUAUCC|C|GCCUGGGGAGUACGUUC(GCAA)GAAU chl.M.poly 1600 GAAACUCAAAGGAAUUGACGGGGGCCC-GCACA-------AGCGGU|GGA chl.M.poly 1650 GCAUGUGGUUUAAUUCG-(AUGCAACG)CGAAGAACCUUACCAGGGCUUG chl.M.poly 1700 ACA----UG|-CC-GUG--AA------UCUUUUU-----(GAA-A-)GAA chl.M.poly 1750 AA-GAG---UG--CC---------(UUCG------)---------GGAA- chl.M.poly 1800 ---------------|CGCGGACA|C|AGGUGGUGCAUG|GCU|GUCGUC chl.M.poly 1850 A|-G-CUCGU|GCC(GUAA)GGUGUUGGG(UUAAGU)CCCGCAACGAGCG chl.M.poly 1900 CAACCCUCU|UGUUUA-G-UUGCCa------------------------- chl.M.poly 1950 -------------------------------------------------- chl.M.poly 2000 -------------------------------------------------- chl.M.poly 2050 -----------------------------(ucauuaaguu)--------u chl.M.poly 2100 |GGAACCCUAAACAGACUGCCGGU(GAUAA----)--------------- chl.M.poly 2150 ---------GCCGGAGGAAGGUGAGGAUGACGUC-AA--GUCAGCAUGCC chl.M.poly 2200 CCUUACGCCCUGGGCGAC-ACACGUGCUACAAUGGC--CGGGACAAAGGG chl.M.poly 2250 UC----GCGACCUC--------------------(----GCGA-)----- chl.M.poly 2300 --------------GAGA-AAGCUAACC-UCAA-AAACCCGGCCUCAGUU chl.M.poly 2350 CGGAUUGCAGGC(--UGCAACUC)GCCUGCAUGAAGCCGGAAUCGCU--- chl.M.poly 2400 ---AGUAAU-CGCCGG(UC--AGCcAU)ACGGCGGUGAAUCC--GUU--- chl.M.poly 2450 -----------------CCCGGGCCUUGUACACACCGCCCGUCACACUAU chl.M.poly 2500 GGGAGCUGG-CCAUGCCCGAAGUCGUU---ACUCU-AACC-(-----gua chl.M.poly 2550 a------)-GG-AGG-GGG-GU-GCCG-AA-C-AGGGGCUAGUGACUGGA chl.M.poly 2600 GUGAAGUCGUAACAAGGUAGCCGUACU(GGAA)GGUGCGGCUGGAUCACC chl.M.poly 2650 UCCUUU--|~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ chl.M.poly 2700 ~~~~~~~~~~~~~~~~| chl.I.mela 0 |---------nnnnnnnnnnnnn-nn(n-nn)nnnn|nnnnnnnnnnnnn chl.I.mela 50 nnC-UGGCGGCAUGCUU--AACACAUGCAAGUCGGACG|GG--------- chl.I.mela 100 ----aagcauc(ca------------------cagu----)gguguuu-- chl.I.mela 150 ----------------CC--AGU--GGCGGACGGGUGAGUAA-CGCGUAA chl.I.mela 200 GA-ACCUGC-CCUU------------------------------------ chl.I.mela 250 -------------------------------------------------G chl.I.mela 300 GGG---------GGGGGACAACGG------------------------CU chl.I.mela 350 G(GAAA)CGG-CUGCUAAUACC-CUAU-AG-------------------- chl.I.mela 400 ------------------GCU-------(GAGG---)-------AGC--- chl.I.mela 450 ---GAAA-----------------------GGA-------------(--- chl.I.mela 500 -----g-gaaa------)---------|----UCCGCCCAAGGA-GGG|G chl.I.mela 550 -CUUGCGU|-CUGAUUA-GCUGGUUGG-UG-AG(G-CAACGG)-CUUACC chl.I.mela 600 AA|GGCGACGAU|CAGUAGCUG|GUCC(GAGA)GGAUGAUCAGC|CACAC chl.I.mela 650 UGGGA(CUGAGACACG)GCCCAGA-C--UCC(UA-CG)GG-A--GGCAG- chl.I.mela 700 CAGUGGGG-AAUUUUCCG-CAAU-GGGC-(-GAAA)-GCCU-GACGGA|G chl.I.mela 750 CAAUGCCGCGUGGAGGUAGAAGGCC(---CACG--)GG-UC--GUAAACU chl.I.mela 800 CC|UUUU-CUCGGAGAAGAAGC--------(--------)--------AA chl.I.mela 850 UGACG|GU-AUCU-GAGGAA-UAAGCAUC|GGCU-AACC-CUGUG(CCA- chl.I.mela 900 -GCAGCC|GCGGU---AA-)GACAGAG|GAUGCAAGCGUUAU-CCGGAAU chl.I.mela 950 GAUUGGGC|GUAAAGCGUCUGUAGGUG|GCUUCGCAAG-|UCC-GCCGUC chl.I.mela 1000 AAAUCUCAGGGC(------------------------------------- chl.I.mela 1050 ---------------------------------UCA)ACCCUGG-AC-AG chl.I.mela 1100 GCGGU--GGA-AAC-U|ACC-AA-G-CUGGAG-UA|CGGUA-----GGGG chl.I.mela 1150 CAGAG|GGAAUUCCCGG-UGGAGCG(GUGAAA)UGCGUAGAGA---UCGG chl.I.mela 1200 GAAGAACACCAACaacGGC(GAAA)GC|A|CUCUG-CUG|GGCCG--A-- chl.I.mela 1250 -------------------------------------------------- chl.I.mela 1300 ----------CACUGACACU|GAG-AGACGAAAGCUAGGGGAGCGAAUGG chl.I.mela 1350 G(AUU-A-GAUAC)-CCCAGUAG-|UC-CUA-GCCGUAAACGAUGGAU-- chl.I.mela 1400 --AC|UA|GGCG-CUGUGCG------------------(-------uauc chl.I.mela 1450 gacc-)-------------------------------------------- chl.I.mela 1500 |------------------------------|-CGUGCAGUGCC-GCAGC chl.I.mela 1550 (UAAC)GCGU-UAAGUAUCC|C|GCCUGGGGAGUACGUUC(GCAA)GAAU chl.I.mela 1600 GAAACUCAAAGGAAUUGACGGGGGCCC-GCACA-------AGCGGU|GGA chl.I.mela 1650 GCAUGUGGUUUAAUUCG-(AUGCAACG)CGAAGAACCUUACCAGGGCUUG chl.I.mela 1700 ACA----UG|-CC-GCG--AA------UCCUCUU-----(GAG-A-)GAG chl.I.mela 1750 AG-GAG---UG--CC---------(UUCG------)---------GGAA- chl.I.mela 1800 ---------------|CGCGGACA|C|AGGUGGUGCAUG|GCU|GUCGUC chl.I.mela 1850 A|-G-CUCGU|GCC(GUAA)GGUGUUGGG(UUAAGU)CCCGCAACGAGCG chl.I.mela 1900 CAACCCUCG|UGUUUA-G-UUGCCA-C----------------------- chl.I.mela 1950 -------------------------------------------------- chl.I.mela 2000 -------------------------------------------------- chl.I.mela 2050 -----------------------------(cauugaguuu)--------- chl.I.mela 2100 |GGAACCCUAAACAGACUGCCGGU(GAUAA----)--------------- chl.I.mela 2150 ---------GCCGGAGGAAGGUGAGGAUGACGUC-AA--GUCAGCAUGCC chl.I.mela 2200 CCUUACGCCCUGGGCGAC-ACACGUGCUACAAUGGC--CGGGACAAAGGG chl.I.mela 2250 UC----GCAACCCC--------------------(----GCGA-)----- chl.I.mela 2300 --------------GGGC-AAGCUAACC-UCAG-AAACCCGGCCUCAGUU chl.I.mela 2350 CGGAUUGCAGGC(--UGCAACUC)GCCUGCACGAAGCCGGAAUCGCU--- chl.I.mela 2400 ---AGUAAU-CGCCGG(UC--AGCCAU)ACGGCGGUGAAUCC--GUU--- chl.I.mela 2450 -----------------CCCGGGCCUUGUACACACCGCCCGUCACACUAU chl.I.mela 2500 GGGAGCUGG-CCAUGCCCGAAAUCGUU---ACCUU-AACC-(-----gca chl.I.mela 2550 a------)-GG-GGA-GGA-AU-GCCG-AAGG-CAGGGCUAGUGACUGGA chl.I.mela 2600 GUGAAGUCGUAACAAGGUAGCCGUACU(GGAA)GGUGCGGnnnnnnnnnn chl.I.mela 2650 nnnnnn--|~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ chl.I.mela 2700 ~~~~~~~~~~~~~~~~| chl.S.apod 0 |---------nnnnnnnnnnnnn-nn(n-nn)nnnn|nnnnnnnnnnnnn chl.S.apod 50 nnC-UGGCGGCAUGCCU--AACACAUGCAAGUCGUACG|GG--------- chl.S.apod 100 ----gagcacc(cu------------------acccgu--)ggugcuc-- chl.S.apod 150 ----------------CC--AGU--GGCGGACGGGUGAGUAA-CGCGUAG chl.S.apod 200 GA-ACCUGC-CCUU------------------------------------ chl.S.apod 250 -------------------------------------------------G chl.S.apod 300 GGA---------GGGGGGCAACAG------------------------CU chl.S.apod 350 G(GGAA)CGG-CUGCUGAUACC-CCAU-AGua------------------ chl.S.apod 400 -------a----------GCU-------(GAGG---)-------AGC--- chl.S.apod 450 ---AAAA-----------------------GGA-------------(--- chl.S.apod 500 -----g-gaaa------)---------|----UCCGCCCAAGGA-GGG|G chl.S.apod 550 -CUUGCGU|-CCGAUUA-GCCUGUUGG-CG-GG(G-UAAUGG)-CUCACC chl.S.apod 600 AA|AGCGACGAU|CGGUAGCUG|GUCC(GAGA)GGACGAUCAGC|CACAC chl.S.apod 650 CGGGA(CUGAGACACG)GCCCGGA-C--UCC(UA-CG)GG-G--GGCAG- chl.S.apod 700 CAGUGGGG-AAUUUUCCG-CAAU-GGGC-(-GAAA)-GCCC-GACGGA|G chl.S.apod 750 CAAUGCCGCGUGGGGGUAGAAGGCC(---UGCG--)GG-UC--GUAAACC chl.S.apod 800 GC|UUUU-ACCGGAGAAGAAGC--------(--------)--------AA chl.S.apod 850 UGACG|GU-AUCC-GGGGAA-UAAGCAUC|GGCU-AACU-CUGUG(CCA- chl.S.apod 900 -GCAGCC|GCGGU---AA-)GACAGAG|GAUGCAAGCGUUAU-CCGGAAU chl.S.apod 950 GAUCGGGC|GUAAAGCGUCUGUAGGUG|GCUCCUAAAG-|UCC-GCCGUC chl.S.apod 1000 AAAUCCCAGGGC(------------------------------------- chl.S.apod 1050 ---------------------------------UUA)ACCCUGG-AA-GG chl.S.apod 1100 GCGGU--GGA-AAC-U|ACU-GA-G-CCUGGG-UA|CGGUA-----GGGG chl.S.apod 1150 CAGGG|GGAAUUUCCGG-UGGAGCG(GUGAAA)UGCGUAGAGA---UCGG chl.S.apod 1200 AAGGAACACCAAU---GGC(GAAA)GC|A|CUCUG-CUG|GGCCG--A-- chl.S.apod 1250 -------------------------------------------------- chl.S.apod 1300 ----------CACUGACACU|GAG-AGACGAAAGCUGGGGGAGCGAAUGG chl.S.apod 1350 G(AUU-A-GAUAC)-CCCAGUAG-|UC-CCA-GCCGUAAACGAUGGAU-- chl.S.apod 1400 --AC|UA|AGCG-CCGCGCG------------------(-------uauc chl.S.apod 1450 gacc-)-------------------------------------------- chl.S.apod 1500 |------------------------------|-CGCGCGGUGCU-GUAGC chl.S.apod 1550 (UAAC)GCGU-CAAGUAUCC|C|GCCUGGGGAGUACGUUC(GCAA)GAAU chl.S.apod 1600 GAAACUCAAAGGAAUUGACGGGGGCCC-GCACA-------AGCGGU|GGA chl.S.apod 1650 GCAUGUGGUUUAAUUCG-(AUGCAACG)CGAAGAACCUUACCAGGGCUUG chl.S.apod 1700 ACA----UG|-CC-GUG--AA------UCCUCUU-----(GAG-A-)GAG chl.S.apod 1750 AG-GGG---UG--CCc--------(uagcc-----)--------gGGAA- chl.S.apod 1800 ---------------|CACGGACA|C|AGGUGGUGCAUG|GCU|GUCGUC chl.S.apod 1850 A|-G-CUCGU|GCC(GUGA)GGCGUUGGG(UUGAGU)CCCGCAACGAGCG chl.S.apod 1900 CAACCCUCG|UGUUUA-G-UUGCCA-U----------------------- chl.S.apod 1950 -------------------------------------------------- chl.S.apod 2000 -------------------------------------------------- chl.S.apod 2050 -----------------------------(cauugggcuu)--------- chl.S.apod 2100 |GGAACCCUAAACAUACUGCCGGC(GAUGA----)--------------- chl.S.apod 2150 ---------GCCGGAGGAGGGUGAGGAUGACGUC-AA--GUCAGCAUGCC chl.S.apod 2200 CCUCACGCCCUGGGCGAC-ACACGUGCUACAAUGGC--CGGGACAAAGGG chl.S.apod 2250 UC----GCAACCCC--------------------(----GCGA-)----- chl.S.apod 2300 --------------GGGC-AGGCCAACC-CCGA-AAACCCGGCCUUAGUU chl.S.apod 2350 CGGAUUGCAGGC(--UGCAACUC)GCCUGCAUGAAGUCGGAAUCGCU--- chl.S.apod 2400 ---AGUAAU-CGCCGG(UC--AGCCAU)ACGGCGGUGAAUCC--GUU--- chl.S.apod 2450 -----------------CCCGGGCCUUGUACACACCGCCCGUCACACUAU chl.S.apod 2500 GGGAGCUGG-CCAUGCCCGAAGUCGUC---GCCUC-AACC-(-----uca chl.S.apod 2550 g------)-GG-AAG-GGA-AC-GCCC-AAGG-CAGGGCUCGCGACUGGA chl.S.apod 2600 GUGAAGUCGUAACAAGGUAGCCGUACU(nnnn)nnnnnnnnnnnnnnnnn chl.S.apod 2650 nnnnnn--|~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ chl.S.apod 2700 ~~~~~~~~~~~~~~~~| chl.L.digi 0 |---------nnnnnnnnnnnnn-nn(n-nn)UCCU|GGCUCAGGAUGAA chl.L.digi 50 CGC-UGGCGGCAUGCUU--AACACAUGCAAGUCGGACG|GG--------- chl.L.digi 100 ----aagcauc(uc------------------agu-----)gguguuu-- chl.L.digi 150 ----------------UC--AGU--GGCGGACGGGUGAGUAA-CGCGUAA chl.L.digi 200 GA-ACCUGC-CCUU------------------------------------ chl.L.digi 250 -------------------------------------------------G chl.L.digi 300 GGA---------GGGGGACAACAG------------------------CU chl.L.digi 350 G(GAAA)CGG-CUGCUAAUACC-CUAU-AG-------------------- chl.L.digi 400 ------------------GCU-------(GAGG---)-------AGC--- chl.L.digi 450 ---AAAA-----------------------GGA-------------(--- chl.L.digi 500 -----g-gaaa------)---------|----UCUGCCCAAGGA-GGG|G chl.L.digi 550 -CUUGCGU|-CUGAUUA-GCUAGUUGG-UG-AG(G-CAAUGG)-CUCACC chl.L.digi 600 GA|GGCGACGAU|CAGUAGCUG|GUCU(GAGA)GGAUGAUCAGC|CACAC chl.L.digi 650 UGGGA(CUGAGACACG)GCCCAGA-C--UCC(UA-CG)GG-A--GGCAG- chl.L.digi 700 CAGUGGGG-AAUUUUCUG-CAAU-GGGC-(-GAAA)-GCCU-GACAGA|G chl.L.digi 750 CAAUGCCGCGUGGAGGUAGAAGGUC(---CACG--)GG-UC--GUAAACU chl.L.digi 800 CC|UUUU-CUCAGAGAAGAAAC--------(--------)--------AA chl.L.digi 850 UGACG|GU-AUCU-GAGGAA-UAAGCAUC|GGCU-AACU-CUGUG(CCA- chl.L.digi 900 -GCAGCC|GCGGU---AA-)GACAGAG|GAUGCAAGCGUUAU-CCGGAAU chl.L.digi 950 GAUUGGGC|GUAAAGCGUCUGUAGGUG|GCUUCUUAAG-|UCC-GCCGUC chl.L.digi 1000 AAAUCCCAGGGC(------------------------------------- chl.L.digi 1050 ---------------------------------UCA)ACCCUGG-AC-GG chl.L.digi 1100 GCGGU--GGA-AAC-U|ACC-AA-G-CUGGAG-UA|CGGUA-----GGGG chl.L.digi 1150 CAGAG|GGAAUUUCCGG-UGGAGCG(GUGAAA)UGCGUAGAGA---UCGG chl.L.digi 1200 AAAGAACACCAAC---GGC(GAAG)GC|A|CUCUG-CUG|GGCCG--A-- chl.L.digi 1250 -------------------------------------------------- chl.L.digi 1300 ----------CACUGACACU|GAG-GGACGAAAGCUAGGGGAGCAAAUGG chl.L.digi 1350 G(AUU-A-GAUAC)-CCCAGUAG-|UC-CUA-GCCGUAAACGAUGGAU-- chl.L.digi 1400 --AC|CA|AGCG-CUGCGCG------------------(-------uauc chl.L.digi 1450 gacc-)-------------------------------------------- chl.L.digi 1500 |------------------------------|-CGUUCAGUGCU-GUAGC chl.L.digi 1550 (UAAC)GCGU-UGAGUAUCC|C|GCCUGGGGAGUACGUUU(GCAA)GAAU chl.L.digi 1600 GAAACUCAAAGGAAUUGACGGGGGCCC-GCACA-------AGCGGU|GGA chl.L.digi 1650 GCAUGUGGUUUAAUUCG-(AUGCAACG)CGAAGAACCUUACCAGGGCUUG chl.L.digi 1700 ACA----UG|-CC-GUG--AA------UCCUCUU-----(GAA-A-)GAG chl.L.digi 1750 AG-GAG---UG--CC---------(UUCG------)---------GGAA- chl.L.digi 1800 ---------------|CGCGGACA|C|AGGUGGUGCAUG|GCU|GUCGUC chl.L.digi 1850 A|-G-CUCGU|GCC(GUAA)GGUGUUGGG(UUAAGU)CCCGCAACGAGCG chl.L.digi 1900 CAACCCUCG|UGUUCA-G-UUGCCA-U----------------------- chl.L.digi 1950 -------------------------------------------------- chl.L.digi 2000 -------------------------------------------------- chl.L.digi 2050 -----------------------------(cacuagguuu)--------- chl.L.digi 2100 |GGAACUCUGAAUAGACUGCCGGU(GAUAA----)--------------- chl.L.digi 2150 ---------GCCGGAGGAAGGUGAGGAUGACGUC-AA--GUCAGCAUGCC chl.L.digi 2200 CCUUACGCCCUGGGCGAC-ACACGUGCUACAAUGGC--CGGGACAAAGGG chl.L.digi 2250 UC----GCAACCCC--------------------(----GCGA-)----- chl.L.digi 2300 --------------GGGC-AAGCUAACC-UCAA-AAACCCGGCCUCAGUU chl.L.digi 2350 CGGAUUGCAGGC(--UGCAACUC)GCCUGCAUGAAGCCGGAAUCGCU--- chl.L.digi 2400 ---AGUAAU-CGCCGG(UC--AGCCAU)ACGGCGGUGAAUCC--GUC--- chl.L.digi 2450 -----------------CCCGGGCCUUGUACACACCGCCCGUCACACUAU chl.L.digi 2500 GGGAGCUGG-CCAUGCCCGAAGUCGUU---ACCUC-AACC-(-----gca chl.L.digi 2550 a------)-GG-AGG-GGG-AU-GCCG-AAGG-CAGGGCUAGUGACUGGA chl.L.digi 2600 GUGAAGUCGUAACAAGGUAGCCGUACU(nnnn)nnnnnnnnnnnnnnnnn chl.L.digi 2650 nnnnnn--|~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ chl.L.digi 2700 ~~~~~~~~~~~~~~~~| chl.E.arve 0 |---------nnnnnnnnnnnnn-nn(n-nn)nnnn|nnnnnnnnnnnnn chl.E.arve 50 nnC-UGGCGGCAUGCUU--AACACAUGCAAGUCGUACG|GG--------- chl.E.arve 100 -----aagcau(cu------------------u-------)auguuu--- chl.E.arve 150 ----------------CC--AGU--GGCGGACGGGUGAGUAA-CGCGUAA chl.E.arve 200 GA-ACCUGC-CCUU------------------------------------ chl.E.arve 250 -------------------------------------------------G chl.E.arve 300 GGA---------GGGGGACAACAG------------------------CC chl.E.arve 350 G(GAAA)CGG-CUGCUAAUACC-CCAU-AG-------------------- chl.E.arve 400 ------------------GCU-------(GGGG---)-------AGC--- chl.E.arve 450 ---AAAA-----------------------GGGA------------(--- chl.E.arve 500 -------ggaa------)---------|---UCCCGCCCAAGGA-GGG|G chl.E.arve 550 -CUUGCGU|-CUGAUUA-GCUAGUUGG-UG-GG(G-CAAUGG)-CUUACC chl.E.arve 600 AA|GGCAACGAU|CAGUAGCUG|GUCU(GAGA)GGAUGAUCAGC|CACAC chl.E.arve 650 UGGGA(CUGAGACACG)GCCCAGA-C--UCC(UA-CG)GG-A--GGCAG- chl.E.arve 700 CAGUGGGG-AAUUUUCCG-CAAU-GGGC-(-GAAA)-G-CU-GACGGA|G chl.E.arve 750 CAAUGCCGCGUGGAGGUAGAAGGCC(---CACG--)GG-UC--GUAAACU chl.E.arve 800 CC|UUUU-CUCAGAGAAGAAGC--------(--------)--------AA chl.E.arve 850 UGACG|GU-AUCU-GAGGAA-UAAGCAUC|GGCU-AACU-CUGUG(CCA- chl.E.arve 900 -GCAGCC|GCGGU---AA-)GACAGGG|GAUGCAAGCGUUAU-CCGGAAU chl.E.arve 950 GAUUGGGC|GUAAAGCGUCUGUAGGUG|GCUUUUUAAG-|UCC-GCCGUC chl.E.arve 1000 AAAUCCCAGGGC(------------------------------------- chl.E.arve 1050 ---------------------------------UCA)ACCCUGG-AC-GG chl.E.arve 1100 GCGGU--GGG-AAC-U|ACC-AA-G-CUGGAG-UA|CGGUA-----GGGG chl.E.arve 1150 CAGAG|GGAAUUUCCGG-UGGAGCG(GUGAAA)UGCGUAGAGA---UCGG chl.E.arve 1200 AAAGAACACCAAC---GGC(GAAA)GC|A|CUCUG-CUG|GGCCG--A-- chl.E.arve 1250 -------------------------------------------------- chl.E.arve 1300 ----------CACUGACACU|GAG-AGACGAAAGCUAGGGGAGCAAAUGG chl.E.arve 1350 G(AUU-A-GAUAC)-CCCAGUAG-|UC-CUA-GCCGUAAACGAUGGAU-- chl.E.arve 1400 --AC|UA|AGCG-CUGUGCG------------------(-------uauc chl.E.arve 1450 gacc-)-------------------------------------------- chl.E.arve 1500 |------------------------------|-CGUGCAGUGCU-GUAGC chl.E.arve 1550 (UAAC)GCGU-UAAGUAUCC|C|GCCUGGGGAGUACGUUC(GCAA)GAAU chl.E.arve 1600 GAAACUCAAAGGAAUUGACGGGGGCCC-GCACA-------AGCGGU|GGA chl.E.arve 1650 GCAUGUGGUUUAAUUCG-(AUGCAACG)CGAAGAACCUUACCAGGGCUUG chl.E.arve 1700 ACA----UG|-UC-GCG--AA------UUCUUUC-----(GAA-A-)GAU chl.E.arve 1750 AG-AAG---UG--CC---------(UACG------)---------GGAG- chl.E.arve 1800 ---------------|CGCGGACA|C|AGGUGGUGCAUG|GCU|GUCGUC chl.E.arve 1850 A|-G-CUCGU|GCC(GUAA)GGUGUUGGG(UUAAGU)CCCGCAACGAGCG chl.E.arve 1900 CAACCCUCG|UGUUUA-G-UUGCCA-U----------------------- chl.E.arve 1950 -------------------------------------------------- chl.E.arve 2000 -------------------------------------------------- chl.E.arve 2050 -----------------------------(uauugaguuu)--------- chl.E.arve 2100 |GGAACCCUAAACAGACUGCCGGU(GAUAA----)--------------- chl.E.arve 2150 ---------GCCGGAGGAAGGUGAGGAUGACGUC-AA--GUCAGCAUGCC chl.E.arve 2200 CCUUACGCCCUGGGCGAC-ACACGUGCUACAAUGGU--CGGGACAAAGGG chl.E.arve 2250 UC----GCGACCCC--------------------(----GCGA-)----- chl.E.arve 2300 ---------------GGC-AAGCUAACC-UCGA-AAACCCGACCUCAGUU chl.E.arve 2350 CGGAUUGCAGGC(--UGCAACUC)GCCUGCAUGAAGUCGGAAUCGCU--- chl.E.arve 2400 ---AGUAAU-CGCCGG(UC--AGCCAU)ACGGCGGUGAAUCC--GUU--- chl.E.arve 2450 -----------------CCCGGGCCUUGUACACACCGCCCGUCACACUAU chl.E.arve 2500 GGGAGCUGG-CCAUGCCCGAAGUCGUU---ACCCU-AACC-(-----gca chl.E.arve 2550 a------)-GG-GGG-GGG-AU-GCCG-AAGG-CAGGGCUAGUGACUGGA chl.E.arve 2600 GUGAAGUCGUAACAAGGUAGCCGUACU(GGAA)GGUGCGGnnnnnnnnnn chl.E.arve 2650 nnnnnn--|~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ chl.E.arve 2700 ~~~~~~~~~~~~~~~~| chl.D.maxi 0 |---------nnnnnnnnnnnnn-nn(n-nn)nnnn|nnnnnnnnnnnnn chl.D.maxi 50 nnC-UGGCGGCAUGCCU--AACACAUGCAAGUCGGACG|GG--------- chl.D.maxi 100 ----aagcauc(cu------------------cgu-----)gguguuu-- chl.D.maxi 150 ----------------CC--AGU--GGCGGACGGGUGAGUAA-CGCGUAA chl.D.maxi 200 GA-ACUUGC-CCUU------------------------------------ chl.D.maxi 250 -------------------------------------------------G chl.D.maxi 300 GGA---------GGGGGACAACAA------------------------CU chl.D.maxi 350 G(GAAA)CGG-CUGCUAAUACC-CCGU-AA-------------------- chl.D.maxi 400 ------------------GCU-------(GAGG---)-------AGC--- chl.D.maxi 450 ---AAAAG----------------------GGA-------------(--- chl.D.maxi 500 -----g-gga-------)---------|----UCCGCCCAAGGA-GGG|G chl.D.maxi 550 -CUUGCGU|-CUGAUUA-GCUGGUUGG-UG-AG(G-CAACGG)-CUUACC chl.D.maxi 600 AA|GGCGACGAU|CAGUAGCUG|GUCU(GAGA)GGAUGAUCAGC|CACAC chl.D.maxi 650 UGGGA(CUGAGACACG)GCCCAGA-C--UCC(UA-CG)GG-A--GGCAG- chl.D.maxi 700 CAGUGGGG-AAUCUUCCG-CAAU-GGGC-(-GAAA)-GCCU-GACGGA|G chl.D.maxi 750 CAAUGCCGCGUGGAGGCAGAAGGCC(---CACG--)GG-UC--GUAAACU chl.D.maxi 800 CC|UUUU-CUCGGAGAAGAAGC--------(--------)--------AG chl.D.maxi 850 UGACG|GU-AUCC-GAGGAA-UAAGCAUC|GGCU-AACU-CUGUG(CCA- chl.D.maxi 900 -GCAGCC|GCGGU---AA-)GACAGGG|GAUGCAAGCGUUAU-CCGGAAU chl.D.maxi 950 GAUUGGGC|GUAAAGCGUCUGUAGGUG|GCUCCUUAAG-|UCC-GCUGUC chl.D.maxi 1000 AAAUCCCAGGGC(------------------------------------- chl.D.maxi 1050 ---------------------------------UCA)ACCCUGG-AC-AG chl.D.maxi 1100 GCGGC--GGA-AAC-U|ACU-AA-G-CUGGAG-UG|CGGUA-----GGGG chl.D.maxi 1150 CAGGG|GGAAUUUCCGG-UGGAGCG(GUGAAA)UGCGUAGAGA---UCGG chl.D.maxi 1200 AAAGAACACCAAA---GGC(GAAG)GC|A|CUCUG-CUG|GGCCG--A-- chl.D.maxi 1250 -------------------------------------------------- chl.D.maxi 1300 ----------CACUGACACU|GAG-AGACGAAAGCUAGGGGAGCGAAUGG chl.D.maxi 1350 G(AUU-A-GAUAC)-CCCAGUAG-|UC-CUA-GCCGUAAACGAUGGAU-- chl.D.maxi 1400 --AC|UA|AUCG-CUGCGCG------------------(-------uauc chl.D.maxi 1450 gacc-)-------------------------------------------- chl.D.maxi 1500 |------------------------------|-CGUGCAGUGCU-GUAGC chl.D.maxi 1550 (UAAC)GCGU-UAAGUAUCC|C|GCCUGGGGAGUACGUUC(GCAA)GAAU chl.D.maxi 1600 GAAACUCAAAGGAAUUGACGGGGGCCC-GCACA-------AGCGGU|GGA chl.D.maxi 1650 GCAUGUGGUUUAAUUCG-(AUGCAACG)CGAAGAACCUUACCAGGGCUUG chl.D.maxi 1700 ACA----UG|-CU-GCG--AA------UCCUCUU-----(GAA-A-)AAG chl.D.maxi 1750 AG-GAG---CG--CC---------(UUUG------)---------GGAA- chl.D.maxi 1800 ---------------|CGCAGACA|C|AGGUGGUGCAUG|GCU|GUCGUC chl.D.maxi 1850 A|-G-CUCGU|GCC(GUAA)GGUGUUGGG(UUAAGU)CCCGCAACGAGCG chl.D.maxi 1900 CAACCCCCG|UGUUUA-G-UUGCCA-C----------------------- chl.D.maxi 1950 -------------------------------------------------- chl.D.maxi 2000 -------------------------------------------------- chl.D.maxi 2050 -----------------------------(uaccaaguuu)--------- chl.D.maxi 2100 |GGAACCCUAAACAGACUGCCGGU(GAUAA----)--------------- chl.D.maxi 2150 ---------GCUGGAGGAAGGUGGGGAUGACGUC-AA--GUCAGCAUGCC chl.D.maxi 2200 CCUUACGUCCUGGGCGAC-ACACGUGCUACAAUGGC--CGAAACAAAGAG chl.D.maxi 2250 CC----GCGACCCC--------------------(----GCGA-)----- chl.D.maxi 2300 --------------GGGC-AAGCUAACC-UCAG-AAACUCGGUCUCAGUU chl.D.maxi 2350 CGGAUUGCAGGC(--UGCAACUC)GCCUGCAUGAAGCCGGAAUCGCU--- chl.D.maxi 2400 ---AGUAAU-CGCCGG(UC--AGCCAU)ACGGCGGUGAAUCC--GUU--- chl.D.maxi 2450 -----------------CCCGGGCCUUGUACACACCGCCCGUCACACUAU chl.D.maxi 2500 GGGAGCUGG-CCAUGCCCGAAGUCGUU---GGCUU-AACC-(-----gca chl.D.maxi 2550 a------)-GG-AGA-GAG-AU-GCCU-AAGG-CAGGGCUAGUGACUGGA chl.D.maxi 2600 GUGAAGUCGUAACAAnnnnnnnnnnnn(nnnn)nnnnnnnnnnnnnnnnn chl.D.maxi 2650 nnnnnn--|~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ chl.D.maxi 2700 ~~~~~~~~~~~~~~~~| chl.P.aqui 0 |~~~~~~~~~~~~~~~~~~~~~~-~~(~-~~)~~~~|~~~~~~~~~~~~~ chl.P.aqui 50 ~~~-~~~~~~~~~~~~~--~~~~~~~~~AAGUCGGACG|GG--------- chl.P.aqui 100 ----aagcauc(cu------------------cgu-----)gguguuu-- chl.P.aqui 150 ----------------CC--AGU--GGCGGACGGGUGAGUAA-CGCGUAA chl.P.aqui 200 GA-ACCUGC-CCUU------------------------------------ chl.P.aqui 250 -------------------------------------------------G chl.P.aqui 300 GGA---------GGGGGACAACAA------------------------CU chl.P.aqui 350 G(GAAA)CGG-UUGCUAAUACC-CCGU-AA-------------------- chl.P.aqui 400 ------------------GCU-------(GAGG---)-------AGC--- chl.P.aqui 450 ---AAaag----------------------GGA-------------(--- chl.P.aqui 500 -----g-gga-------)---------|----UCCGCCCAAGGA-GGG|G chl.P.aqui 550 -CUUGCGU|-CUGAUUA-GCUAGUUGG-UG-AG(G-CAAUGG)-CUUACC chl.P.aqui 600 AA|GGCGACGAU|CAGUAGCUG|GUCU(GAGA)GGAUGAUCAGC|CACAC chl.P.aqui 650 UGGGA(CUGAGACACG)GCCCAGA-C--UCC(UA-CG)GG-A--GGCAG- chl.P.aqui 700 CAGUGGGG-AAUCUUCCG-CAAU-GGGC-(-GAAA)-G-CU-GACGGA|G chl.P.aqui 750 CAAUGCCGCGUGGAGGCAGAAGGCC(---CACG--)GG-UC--GUAAACU chl.P.aqui 800 CC|UUUU-CUCGGAGAAGAAGC--------(--------)--------AA chl.P.aqui 850 UGACG|GU-AUCU-GAGGAA-UAAGCAUC|GGCU-AACU-CUGUG(CCA- chl.P.aqui 900 -GCAGCC|GCGGU---AA-)GACAGGG|GAUGCAAGCGUUAU-CCGGAAU chl.P.aqui 950 GAUUGGGC|GUAAAGCGUCUGUAGGUG|GCUCCUUAAG-|UCC-GCUGUC chl.P.aqui 1000 AAAUCCCAGGGC(------------------------------------- chl.P.aqui 1050 ---------------------------------UCA)ACCCCGG-AC-AG chl.P.aqui 1100 GCAGU--GGA-AAC-U|ACU-GG-G-CUGGAG-UA|CGGUA-----GGGG chl.P.aqui 1150 CAGAG|GGAAUUUCCGG-UGGAGCG(GUGAAA)UGCGUAGAGA---UCGG chl.P.aqui 1200 AAAGAACACCAAA---GGC(GAAG)GC|A|CUCUG-CUG|GGCCG--A-- chl.P.aqui 1250 -------------------------------------------------- chl.P.aqui 1300 ----------CACUGACACU|GAG-AGACGAAAGCUAGGGGAGCAAAUGG chl.P.aqui 1350 G(AUU-A-GAUAC)-CCCAGUAG-|UC-CUA-GCCGUAAACGAUGGAU-- chl.P.aqui 1400 --AC|UA|AUCG-CUGCGCG------------------(-------uauc chl.P.aqui 1450 gacc-)-------------------------------------------- chl.P.aqui 1500 |------------------------------|-CGUGCAGUGCU-GUAGC chl.P.aqui 1550 (UAAC)GCGU-UAAGUAUCC|C|GCCUGGGGAGUACGUUC(GCAA)GAAU chl.P.aqui 1600 GAAACUCAAAGGAAUUGACGGGGGCCC-GCACA-------AGCGGU|GGA chl.P.aqui 1650 GCAUGUGGUUUAAUUCG-(AUGCAACG)CGAAGAACCUUACCAGGGCUUG chl.P.aqui 1700 ACA----UG|-CU-GCG--AA------UCCUUUU-----(GAA-A-)GAG chl.P.aqui 1750 AG-GAG---UG--CC---------(UUCG------)---------GGAA- chl.P.aqui 1800 ---------------|CGCAGACA|C|AGGUGGUGCAUG|GCU|GUCGUC chl.P.aqui 1850 A|-G-CUCGU|GCC(GUAA)GGUGUUGGG(UUAAGU)CCCGCAACGAGCG chl.P.aqui 1900 CAACCCCCG|UGUUUA-G-UUGCCA-C----------------------- chl.P.aqui 1950 -------------------------------------------------- chl.P.aqui 2000 -------------------------------------------------- chl.P.aqui 2050 -----------------------------(uaucaaguuu)--------- chl.P.aqui 2100 |GGAACCCUAAACAGACUGCCGGU(GAUAA----)--------------- chl.P.aqui 2150 ---------GCCGGAGGAAGGUGGGGAUGACGUC-AA--GUCAGCAUGCC chl.P.aqui 2200 CCUUACGCCCUGGGCGAC-ACACGUGCUACAAUGGC--CGAAACAGAGAG chl.P.aqui 2250 CC----GCGACCCC--------------------(----GCGA-)----- chl.P.aqui 2300 --------------GGGC-AAGCUAACC-UCAG-AAACUCGGUCUCAGUU chl.P.aqui 2350 CGGAUUGCAGGC(--UGCAACUC)GCCUGCAUGAAGCCGGAAUCGCU--- chl.P.aqui 2400 ---AGUAAU-CGCCGG(UC--AGCCAC)ACGGCGGUGAAUCC--GUU--- chl.P.aqui 2450 -----------------CCCGGGCCUUGUACACACCGCCCGUCACACUAU chl.P.aqui 2500 GGGAGCUGG-CCAUGCCCGAAGUCGUU---GGCUU-AACC-(-----gca chl.P.aqui 2550 a------)-GG-AGG-GAG-AU-GCCU-AAGG-CAG~~~~~~~~~~~~~~ chl.P.aqui 2600 ~~~~~~~~~~~~~~~~~~~~~~~~~~~(~~~~)~~~~~~~~~~~~~~~~~ chl.P.aqui 2650 ~~~~~~~~|~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ chl.P.aqui 2700 ~~~~~~~~~~~~~~~~| chl.C.glau 0 |---------nnnnnnnnnnnnn-nn(n-nn)nnnn|nnnnnnnnnnnnn chl.C.glau 50 nnC-UGGCGGCAUGCCU--AACACAUGCAAGUCGGACG|GG--------- chl.C.glau 100 ----aagcauc(cu------------------cgu-----)gguguuu-- chl.C.glau 150 ----------------CC--AGU--GGCGGACGGGUGAGUAA-CGCGUAA chl.C.glau 200 GA-ACCUGC-CCUU------------------------------------ chl.C.glau 250 -------------------------------------------------G chl.C.glau 300 GGA---------GGGGGACAACAG------------------------CU chl.C.glau 350 G(GAAA)CGG-UUGCUAAUACC-CCAU-AG-------------------- chl.C.glau 400 ------------------GCU-------(GAGG---)-------AGC--- chl.C.glau 450 ---AAAAG----------------------GGA-------------(--- chl.C.glau 500 -----g-gga-------)---------|----UCCGCCCGAGGA-GGG|G chl.C.glau 550 -CUUGCGU|-CUGAUUA-GCUAGUUGG-UG-GG(G-CAGUGG)-CUUACC chl.C.glau 600 AA|GGCGACGAU|CAGUAGCUG|GUCU(GAGA)GGAUGAUCAGC|CACAC chl.C.glau 650 UGGGA(CUGAGACACG)GCCCAGA-C--UCC(UA-CG)GG-A--GGCAG- chl.C.glau 700 CAGUGGGG-AAUCUUCCG-CAAU-GGGC-(-GAAA)-GCCU-GACGGA|G chl.C.glau 750 CAAUGCCGCGUGGAGGUAGAAGGCC(---CACG--)GG-UC--GUAAACU chl.C.glau 800 CC|UUUU-CUCGGAGAAGAAGC--------(--------)--------AA chl.C.glau 850 UGACG|GU-AUCU-GAGGAA-UAAGCAUC|GGCU-AACU-CUGUG(CCA- chl.C.glau 900 -GCAGCC|GCGGU---AA-)GACAGGG|GAUGCAAGCGUUAU-CCGGAAU chl.C.glau 950 GAUUGGGC|GUAAAGCGUCUGUAGGUG|GCUCCUUAAG-|UCC-GCUGUC chl.C.glau 1000 AAAUCCCAGGGC(------------------------------------- chl.C.glau 1050 ---------------------------------UCA)ACCCUGG-AC-AG chl.C.glau 1100 GCGGU--GGA-AAC-U|ACU-GA-G-CUAGAG-UA|CGGUA-----GGGG chl.C.glau 1150 CAGAG|GGAAUUUUCGG-UGGAGCG(GUGAAA)UGCGUAGAGA---UCGA chl.C.glau 1200 AAAGAACACCAAA---GGC(GAAG)GC|A|CUCUG-CUG|GGCCG--A-- chl.C.glau 1250 -------------------------------------------------- chl.C.glau 1300 ----------CACUGACACU|GAG-AGACGAAAGCUAGGGGAGCGAAUGG chl.C.glau 1350 G(AUU-A-GAUAC)-CCCAGUAG-|UC-CUA-GCCGUAAACGAUGGAU-- chl.C.glau 1400 --AC|UA|AGCG-CUGCGCG------------------(-------uauc chl.C.glau 1450 gacc-)-------------------------------------------- chl.C.glau 1500 |------------------------------|-CGUGCAGUGCU-GUAGC chl.C.glau 1550 (UAAC)GCGU-UAAGUAUCC|C|GCCUGGGGAGUACGUUC(GCAA)GAAU chl.C.glau 1600 GAAACUCAAAGGAAUUGACGGGGGCCC-GCACA-------AGCGGU|GGA chl.C.glau 1650 GCAUGUGGUUUAAUUCG-(AUGCAACG)CGAAGAACCUUACCAGGGCUUG chl.C.glau 1700 ACA----UG|-CU-GCG--AA------UCCUCUU-----(GAA-A-)GAG chl.C.glau 1750 AG-GAG---UG--CC---------(UUCG------)---------GGAA- chl.C.glau 1800 ---------------|CGCGGACA|C|AGGUGGUGCAUG|GCU|GUCGUC chl.C.glau 1850 A|-G-CUCGU|GCC(GUAA)GGUGUUGGG(UUAAGU)CCCGCAACGAGCG chl.C.glau 1900 CAACCCUCG|UGUUUA-G-UUGCCA-C----------------------- chl.C.glau 1950 -------------------------------------------------- chl.C.glau 2000 -------------------------------------------------- chl.C.glau 2050 -----------------------------(uacuaaguuu)--------- chl.C.glau 2100 |GGAACCCUAAACAGACUGCCGGU(GAUAA----)--------------- chl.C.glau 2150 ---------GCCGGAGGAAGGUGGGGAUGACGUC-AA--GUCAGCAUGCC chl.C.glau 2200 CCUUACGCCCUGGGCGAC-ACACGUGCUACAAUGGC--CGGGACAAAGAG chl.C.glau 2250 CC----GCGACCCC--------------------(----GCGA-)----- chl.C.glau 2300 --------------GGGC-AAGCUAACC-UCAG-AAACUCGGUCUCAGUU chl.C.glau 2350 CGGAUUGCAGGC(--UGCAACUC)GCCUGCAUGAAGCCGGAAUCGCU--- chl.C.glau 2400 ---AGUAAU-CGCCGG(UC--AGCCAC)ACGGCGGUGAAUCC--GUU--- chl.C.glau 2450 -----------------CCCGGGCCUUGUACACACCGCCCGUCACACUAU chl.C.glau 2500 GGGAGCUGG-CCAUGCCCGAAGUCGUU---AGCUU-AACC-(-----gca chl.C.glau 2550 a------)-GG-AGG-GGG-AU-GCCU-AAGG-CAGGGCUAGUGACUGGA chl.C.glau 2600 GUGAAGUCGUAACAAnnnnnnnnnnnn(nnnn)nnnnnnnnnnnnnnnnn chl.C.glau 2650 nnnnnn--|~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ chl.C.glau 2700 ~~~~~~~~~~~~~~~~| chl.O.cinn 0 |---------nnnnnnnnnnnnn-nn(n-nn)nnnn|nnnnnnnnnnnnn chl.O.cinn 50 nnC-UGGCGGCAUGCUU--AACACAUGCAAGUCGGACG|GG--------- chl.O.cinn 100 ----aagcauc(cu------------------cgu-----)ggugcuu-- chl.O.cinn 150 ----------------CC--AGU--GGCGGACGGGUGAGUAA-CGCGUAA chl.O.cinn 200 GA-ACCUGC-CCUU------------------------------------ chl.O.cinn 250 -------------------------------------------------G chl.O.cinn 300 GGA---------GGGGGACAACAG------------------------CU chl.O.cinn 350 G(GAAA)CGG-CUGCUAAUACC-CCAU-AG-------------------- chl.O.cinn 400 ------------------GCU-------(GAGG---)-------AGC--- chl.O.cinn 450 ---AAAAG----------------------GGA-------------(--- chl.O.cinn 500 -------ggaa------)---------|----UCCGCCCAAGGA-GGG|G chl.O.cinn 550 -CUUGCGU|-CUGAUUA-GCUAGUUGG-UG-AG(G-CAAUGG)-CUUACC chl.O.cinn 600 AA|GGCGACGAU|CAGUAGCUG|GUCU(GAGA)GGAUGAUCAGC|CACAC chl.O.cinn 650 UGGGA(CUGAGACACG)GCCCAGA-C--UCC(UA-CG)GG-A--GGCAG- chl.O.cinn 700 CAGUGGGG-AAUCUUCCG-CAAU-GGGC-(-GAAA)-GCCU-GACGGA|G chl.O.cinn 750 CAAUGCCGCGUGGAGGUAGAAGGCC(---CACG--)GG-UC--GUAAACU chl.O.cinn 800 CC|UUUU-CUCGGAGAAGAAGC--------(--------)--------AA chl.O.cinn 850 UGACG|GU-AUCU-GAGGAA-UAAGCAUC|GGCU-AACU-CUGUG(CCA- chl.O.cinn 900 -GCAGCC|GCGGU---AA-)GACAGGG|GAUGCAAGCGUUAU-CCGGAAU chl.O.cinn 950 GAUUGGGC|GUAAAGCGUCUGUAGGUG|GCUCCUUAAG-|UCU-GCUGUC chl.O.cinn 1000 AAAUCCCAGGGC(------------------------------------- chl.O.cinn 1050 ---------------------------------UCA)ACCCUGG-AC-AG chl.O.cinn 1100 GCGGU--GGA-AAC-U|AUC-GA-G-CUGGAG-UA|CGGUA-----GGGG chl.O.cinn 1150 CAGAG|GGAAUUUCCGG-UGGAGCG(GUGAAA)UGCGUAGAGA---UCGG chl.O.cinn 1200 AAAGAACACCAAU---GGC(GAAG)GC|A|CUCUG-CUG|GGCCG--A-- chl.O.cinn 1250 -------------------------------------------------- chl.O.cinn 1300 ----------CACUGACACU|AAG-AGACGAAAGCUAGGGGAGCGAAUGG chl.O.cinn 1350 G(AUU-A-GAUAC)-CCCAGUAG-|UC-CUA-GCCGUAAACGAUGGAU-- chl.O.cinn 1400 --AC|UA|AGCG-CUGUGCG------------------(-------uauc chl.O.cinn 1450 gacc-)-------------------------------------------- chl.O.cinn 1500 |------------------------------|-CGUGCAGUGCU-GUAGC chl.O.cinn 1550 (UAAC)GCGU-UAAGUAUCC|C|GCCUGGGGAGUACGUUC(GCAA)GAAU chl.O.cinn 1600 GAAACUCAAAGGAAUUGACGGGGGCCC-GCACA-------AGCGGU|GGA chl.O.cinn 1650 GCAUGUGGUUUAAUUCG-(AUGCAACG)CGAAGAACCUUACCAGGGCUUG chl.O.cinn 1700 ACA----UG|-CC-GCG--AA------UCCUUUU-----(GAG-A-)GAG chl.O.cinn 1750 AG-GAG---UG--CC---------(UUCG------)---------GGAA- chl.O.cinn 1800 ---------------|CGCGGACA|C|AGGUGGUGCAUG|GCU|GUCGUC chl.O.cinn 1850 A|-G-CUCGU|GCC(GUAA)GGUGUUGGG(UUAAGU)CCCGCAACGAGCG chl.O.cinn 1900 CAACCCUCG|UGUUUA-G-UUGCCA-U----------------------- chl.O.cinn 1950 -------------------------------------------------- chl.O.cinn 2000 -------------------------------------------------- chl.O.cinn 2050 -----------------------------(uauugaguuu)--------- chl.O.cinn 2100 |GGAACCCUAAACAGACUGCCGGU(GAUAA----)--------------- chl.O.cinn 2150 ---------GCCGGAGGAAGGUGGGGAUGACGUC-AA--GUCAGCAUGCC chl.O.cinn 2200 CCUUACGCCCUGGGCGAC-ACACGUGCUACAAUGGC--CGGGACAAAGGG chl.O.cinn 2250 UC----GCGACCCC--------------------(----GCGA-)----- chl.O.cinn 2300 --------------GGGC-AAGCUAACC-UCAA-AAACCCGGCCUCAGUU chl.O.cinn 2350 CGGAUUGCAGGC(--UGCAACUC)GCCUGCAUGAAGCCGGAAUCGCU--- chl.O.cinn 2400 ---AGUAAU-CGCCGG(UC--AGCCAU)ACGGCGGUGAAUCC--GUU--- chl.O.cinn 2450 -----------------CCCGGGCCUUGUACACACCGCCCGUCACACUAU chl.O.cinn 2500 GGGAGCUGG-CCAUGCCCGAAGUCGUU---ACCUU-AACC-(-----gca chl.O.cinn 2550 g------)-GG-AGG-GGG-AU-GCCG-AAGG-CAGGGCUAGUGACUGGA chl.O.cinn 2600 GUGAAGUCGUAACAAnnnnnnnnnnnn(nnnn)nnnnnnnnnnnnnnnnn chl.O.cinn 2650 nnnnnn--|~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ chl.O.cinn 2700 ~~~~~~~~~~~~~~~~| chl.L.japo 0 |---------nnnnnnnnnnnnn-nn(n-nn)nnnn|nnnnnnnnnnnnn chl.L.japo 50 nnC-UGGCGGCAUGCCU--AACACAUGCAAGUCGGACG|GG--------- chl.L.japo 100 ----gagcacc(cu------------------cgu-----)gguguuu-- chl.L.japo 150 ----------------CC--AGU--GGCGGACGGGUGAGUAA-CGCGUAA chl.L.japo 200 GA-ACCUGC-CCCU------------------------------------ chl.L.japo 250 -------------------------------------------------G chl.L.japo 300 GGA---------GGGGGACAACAG------------------------CU chl.L.japo 350 G(GAAA)CGG-CUGCUAAUACC-CCAU-AA-------------------- chl.L.japo 400 ------------------GCU-------(GAGG---)-------AGC--- chl.L.japo 450 ---AAAAG----------------------GGA-------------(--- chl.L.japo 500 -----g-gaa-------)---------|----UCCGCCCGAGGA-GGG|G chl.L.japo 550 -CUUGCGU|-CUGAUUA-GCUAGUUGG-UG-GG(G-CAAUGG)-CUCACC chl.L.japo 600 AA|GGCGACGAU|CAGUAGCUG|GUCU(GAGA)GGAUGAUCAGC|CACAC chl.L.japo 650 UGGGA(CUGAGACACG)GCCCAGA-C--UCC(UA-CG)GG-A--GGCAG- chl.L.japo 700 CAGUGGGG-AAUCUUCCG-CAAU-GGGC-(-GAAA)-GCCU-GACGGA|G chl.L.japo 750 CAAUGCCGCGUGGAGGUAGAAGGCC(---CACG--)GG-UC--GUAAACU chl.L.japo 800 CC|UUUU-CUCGGAGAAGAAGC--------(--------)--------AA chl.L.japo 850 UGACG|GU-AUCU-GAAGAA-UAAGCAUC|GGCU-AACU-CUGUG(CCA- chl.L.japo 900 -GCAGCC|GCGGU---AA-)GACAGAG|GAUGCAAGCGUUAU-CCGGAAU chl.L.japo 950 GAUUGGGC|GUAAAGCGUCUGUAGGUG|GCUCUUUAAG-|UCC-CCUGUC chl.L.japo 1000 AAAUACCAGGGC(------------------------------------- chl.L.japo 1050 ---------------------------------UUA)ACCCUGG-AU-AG chl.L.japo 1100 GCGGU--GGA-AAC-U|ACU-GA-G-CUGGAG-UA|CGGUA-----GGGG chl.L.japo 1150 CAGAG|GGAAUUUCCGG-UGGAGCG(GUGAAA)UGCGUAGAGA---UCGG chl.L.japo 1200 AAGGAACACCAAA---GGC(GAAC)GC|A|CUCUG-CUG|GGCCG--A-- chl.L.japo 1250 -------------------------------------------------- chl.L.japo 1300 ----------CACUGACACU|GAG-AGACGAAAGCUAGGGGAGCAAAUGG chl.L.japo 1350 G(AUU-A-GAUAC)-CCCAGUAG-|UC-CUA-GCCGUAAACGAUGGAU-- chl.L.japo 1400 --AC|UA|GGCG-UUGUACG------------------(-------uauu chl.L.japo 1450 gacc-)-------------------------------------------- chl.L.japo 1500 |------------------------------|-CGUGCAGUGCU-GUAGC chl.L.japo 1550 (UAAC)GCGU-UAAGUAUCC|C|GCCUGGGGAGUACGUUC(GCAA)GAAU chl.L.japo 1600 GAAACUCAAAGGAAUUGACGGGGGCCC-GCACA-------AGCGGU|GGA chl.L.japo 1650 GCAUGUGGUUUAAUUCG-(AUGCAACG)CGAAGAACCUUACCAGGGCUUG chl.L.japo 1700 ACA----UA|-CU-GCG--AA------UCCUUUU-----(GAA-A-)AAA chl.L.japo 1750 AG-GAG---UG--CC---------(UUCG------)---------GGAA- chl.L.japo 1800 ---------------|CGUGGAUA|C|AGGUGGUGCAUG|GCU|GUCGUC chl.L.japo 1850 A|-G-CUCGU|GCC(GUAA)GGUGUUGGG(UUAAGU)CCCGCAACGAGCG chl.L.japo 1900 CAACCCUCG|UGUUUA-G-UUGCCA-U----------------------- chl.L.japo 1950 -------------------------------------------------- chl.L.japo 2000 -------------------------------------------------- chl.L.japo 2050 -----------------------------(uacucaaauu)--------- chl.L.japo 2100 |GGAACCCUAAACAGACUGCCGGU(GAUAA----)--------------- chl.L.japo 2150 ---------GCCGGAGGAAGGUGGGGAUGACGUC-AA--GUCAGCAUGCC chl.L.japo 2200 CCUUACGCUCUGGGCGAC-ACACGUGCUACAAUGGC--CGGGACAGAGGG chl.L.japo 2250 UC----GCGACCCC--------------------(----GUGA-)----- chl.L.japo 2300 --------------GGGC-AAGCUAACC-UCAG-AAACUCGGCCUCAGUU chl.L.japo 2350 CGGAUUGCAGGC(--UGCAACUC)GCCUGCAUGAAGCCGGAAUCGCU--- chl.L.japo 2400 ---AGUAAU-CACCGG(UC--AGCCAU)ACGGCGGUGAAUCC--GUU--- chl.L.japo 2450 -----------------CCCGGGCCUUGUACACACCGCCCGUCACACUAU chl.L.japo 2500 GGGAGCUGG-CCAUGCCCGAAGUCGUU---ACCUC-AACC-(-----gcg chl.L.japo 2550 a------)-GG-AGG-GGG-AU-GCCG-AAGG-CAGGGCUAGUGACUGGA chl.L.japo 2600 GUGAAGUCGUAACAAGGUUGCCGUACU(nnnn)nnnnnnnnnnnnnnnnn chl.L.japo 2650 nnnnnn--|~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ chl.L.japo 2700 ~~~~~~~~~~~~~~~~| chl.A.evec 0 |---------nnnnnnnnnnnnn-nn(n-nn)nnnn|nnnnnnnnnnnnn chl.A.evec 50 nnC-UGGCGGCAUGCUU--AACACAUGCAAGUCGGACG|GG--------- chl.A.evec 100 ----aagcauc(cu------------------ugu-----)gauguuu-- chl.A.evec 150 ----------------CC--AGU--GGCGGACGGGUGAGUAA-CGCGUAA chl.A.evec 200 GA-ACCUGC-CCUU------------------------------------ chl.A.evec 250 -------------------------------------------------G chl.A.evec 300 GGA---------GGGGGACAACAG------------------------CU chl.A.evec 350 G(GAAA)CGG-CUGCUAAUACC-CCAU-AG-------------------- chl.A.evec 400 ------------------GCU-------(GAGG---)-------AGC--- chl.A.evec 450 ---GAAAA----------------------GGA-------------(--- chl.A.evec 500 -----g-gaa-------)---------|----UCCGCCCAAGGA-GGG|G chl.A.evec 550 -CUUGCGU|-CUGAUUA-GCUAGUUGG-UG-AG(G-CAAUGG)-CUUACC chl.A.evec 600 AA|GGCGACGAU|CAGUAGCUG|GUCU(GAGA)GGAUGAUCAGC|CACAC chl.A.evec 650 UGGGA(CUGAGACACG)GCCCAGA-C--UCC(UA-CG)GG-A--GGCAG- chl.A.evec 700 CAGUGGGG-AAUUUUCCG-CAAU-GGGC-(-GAAA)-G-CU-GACGGA|G chl.A.evec 750 CAAUGCCGCGUGGAGGUAGAAGGCC(---CACG--)GG-UC--GUAAACU chl.A.evec 800 CC|UUUU-CUCAGAGAAGAAGC--------(--------)--------AA chl.A.evec 850 UGACG|GU-AUCU-GAGGAA-UAAGCAUC|GGCU-AACU-CUGUG(CCA- chl.A.evec 900 -GCAGCC|GCGGU---AA-)GACAGAG|GAUGCAAGCGUUAU-CCGGAAU chl.A.evec 950 GAUUGGGC|GUAAAGCGUCUGUAGGUG|GCUUCUUAAG-|UCC-GCCGUC chl.A.evec 1000 AAAUCCCAGGGC(------------------------------------- chl.A.evec 1050 ---------------------------------UCA)ACCCUGG-AC-AG chl.A.evec 1100 GCGGU--GGA-AAC-U|ACC-AA-G-CUGGAG-UA|CGGUA-----GGGG chl.A.evec 1150 CAGAG|GGAAUUUCCGG-UGGAGCG(GUGAAA)UGCGUAGAGA---UCGG chl.A.evec 1200 AAAGAACACCAAU---GGC(GAAA)GC|A|CUCUG-CUG|GGCCG--A-- chl.A.evec 1250 -------------------------------------------------- chl.A.evec 1300 ----------CACUGACACU|GAG-AGACGAAAGCUAGGGGAGCGAAUGG chl.A.evec 1350 G(AUU-A-GAUAC)-CCCAGUAG-|UC-CUA-GCCGUAAACGAUGGAU-- chl.A.evec 1400 --AC|UA|AGCG-UUGUGCG------------------(-------uauc chl.A.evec 1450 gacc-)-------------------------------------------- chl.A.evec 1500 |------------------------------|-CGUGCAGUGCU-GUAGC chl.A.evec 1550 (UAAC)GCGU-UAAGUAUCC|C|GCCUGGGGAGUACGUUC(GCAA)GAAU chl.A.evec 1600 GAAACUCAAAGGAAUUGACGGGGGCCC-GCACA-------AGCGGU|GGA chl.A.evec 1650 GCAUGUGGUUUAAUUCG-(AUGCAACG)CGAAGAACCUUACCAGGGCUUG chl.A.evec 1700 ACA----UG|-CC-GUG--AA------UCCUUUU-----(GAA-A-)GAG chl.A.evec 1750 AG-GAG---UG--CC---------(UUCG------)---------GGAA- chl.A.evec 1800 ---------------|CGCGGAUA|C|AGGUGGUGCAUG|GCU|GUCGUC chl.A.evec 1850 A|-G-CUCGU|GCC(GUAA)GGUGUUGGG(UUAAGU)CCCGCAACGAGCG chl.A.evec 1900 CAACCCUCG|UGUUUA-G-UUGCCA-U----------------------- chl.A.evec 1950 -------------------------------------------------- chl.A.evec 2000 -------------------------------------------------- chl.A.evec 2050 -----------------------------(uauugaguuu)--------- chl.A.evec 2100 |GGAACCCUAAACAGACUGCCGGU(GAUAA----)--------------- chl.A.evec 2150 ---------GCCGGAGGAAGGUGAGGAUGACGUC-AA--GUCAGCAUGCC chl.A.evec 2200 CCUUACGCCCUGGGCGAC-ACACGUGCUACAAUGGC--CGGGACAAAGGG chl.A.evec 2250 UC----GCGACCCC--------------------(----GCGA-)----- chl.A.evec 2300 --------------GGGC-AAGCUAACC-UCAA-AAACUCGGCCUCAGUU chl.A.evec 2350 CGGAUUGCAGGC(--UGCAACUC)GCCUGCAUGAAGCCGGAAUCGCU--- chl.A.evec 2400 ---AGUAAU-CGCCGG(UC--AGCCAU)ACGGCGGUGAAUCC--GUU--- chl.A.evec 2450 -----------------CCCGGGCCUUGUACACACCGCCCGUCACACUAU chl.A.evec 2500 GGGAGCUGG-CCAUGCCCGAAGUCGUU---ACCUU-AACC-(-----gcg chl.A.evec 2550 a------)-GG-AGG-GGG-AU-GCCG-AAGG-CAGGGCUAGUGACUGGA chl.A.evec 2600 GUGAAGUCGUAACAAGGUAGCCGUACU(GGAA)GGUGCGGnnnnnnnnnn chl.A.evec 2650 nnnnnn--|~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ chl.A.evec 2700 ~~~~~~~~~~~~~~~~| chl.B.bite 0 |---------nnnnnnnnnnnnn-nn(n-nn)nnnn|nnnnnnnnnnnnn chl.B.bite 50 nnC-UGGCGGCAUGCUU--AACACAUGCGAGUCGGACG|GA--------- chl.B.bite 100 ----aagcauc(cc------------------agu-----)gguguuu-- chl.B.bite 150 ----------------UC--AGU--GGCGGACGGGUGAGUAA-CGCGUAA chl.B.bite 200 GA-ACCUGC-CCUU------------------------------------ chl.B.bite 250 -------------------------------------------------G chl.B.bite 300 GGA---------GGGGGACAACAG------------------------CU chl.B.bite 350 G(GAAA)CGG-CUGCUAAUACC-CCAU-AG-------------------- chl.B.bite 400 ------------------GCU-------(GAGG---)-------AGC--- chl.B.bite 450 ---GAAAA----------------------GGA-------------(--- chl.B.bite 500 -----g-gaa-------)---------|----UCCGCCCAAGGA-GGG|G chl.B.bite 550 -CUUGCGU|-CUGAUUA-GCUGGUUGG-UG-AG(G-CAAUGG)-CUCACC chl.B.bite 600 AA|GGCGACGAU|CAGUAGCUG|GUCC(GAGA)GGAUGAUCAGC|CACAC chl.B.bite 650 UGGGA(CUGAGACACG)GCCCAGA-C--UCC(UA-CG)GG-A--GGCAG- chl.B.bite 700 CAGUGGGG-AAUUUUCCG-CAAU-GGGC-(-GAAA)-GCCU-GACGGA|G chl.B.bite 750 CAAUGCCGCGUGGAGGUAGAAGGCC(---CACG--)GG-UC--GUAAACU chl.B.bite 800 CC|UUUU-CCCGGAGAAGAAGC--------(--------)--------AA chl.B.bite 850 UGACG|GU-AUCU-GGGGAA-UAAGCAUC|GGCU-AACU-CUGUG(CCA- chl.B.bite 900 -GCAGCC|GCGGU---AA-)GACAGAG|GAUGCAAGCGUUAU-CCGGAAU chl.B.bite 950 GAUUGGGC|GUAAAGCGUCUGUAGGUG|GCUUCUCAAG-|UCC-GCCGUC chl.B.bite 1000 AAAUCCCAGGGC(------------------------------------- chl.B.bite 1050 ---------------------------------UCA)ACCCUGG-AC-GG chl.B.bite 1100 GCGGU--GGA-AAC-U|ACU-AA-G-CUGGAG-UA|CGGUA-----GGGG chl.B.bite 1150 CAGAG|GGAAUUUCCGG-UGGAGCG(GUGAAA)UGCGUAGAGA---UCGG chl.B.bite 1200 AAGGAACACCAAC---GGC(GAAA)GC|A|CUCUG-CUG|GGCCG--A-- chl.B.bite 1250 -------------------------------------------------- chl.B.bite 1300 ----------CACUGACACU|GAG-AGACGAAAGCUAGGGGAGCGAAUGG chl.B.bite 1350 G(AUU-A-GAUAC)-CCCAGUAG-|UC-CUA-GCCGUAAACGAUGGAU-- chl.B.bite 1400 --AC|UA|AGCG-CUGCGCG------------------(-------uauc chl.B.bite 1450 gacc-)-------------------------------------------- chl.B.bite 1500 |------------------------------|-CGUGCAGUGCU-GUAGC chl.B.bite 1550 (UAAC)GCGU-UAAGUAUCC|C|GCCUGGGGAGUACGUUC(GCAA)GAAU chl.B.bite 1600 GAAACUCAAAGGAAUUGACGGGGGCCC-GCACA-------AGCGGU|GGA chl.B.bite 1650 GCAUGUGGUUUAAUUCG-(AUGCAACG)CGAAGAACCUUACCAGGGCUUG chl.B.bite 1700 ACA----UG|-CC-GUG--AA------UCCUCUU-----(GAG-A-)GAG chl.B.bite 1750 GG-GAG---UG--CC---------(UUCG------)---------GGAA- chl.B.bite 1800 ---------------|CGCGGACA|C|AGGUGGUGCAUG|GCU|GUCGUC chl.B.bite 1850 A|-G-CUCGU|GCC(GUGA)GGUGUUGGG(UUAAGU)CCCGCAACGAGCG chl.B.bite 1900 CAACCCCCG|UGUUUA-G-UUGCCA-U----------------------- chl.B.bite 1950 -------------------------------------------------- chl.B.bite 2000 -------------------------------------------------- chl.B.bite 2050 -----------------------------(uauucaguuu)--------- chl.B.bite 2100 |GGAACCCUAAACAGACUGCCGGU(GAUAA----)--------------- chl.B.bite 2150 ---------GCCGGAGGAAGGUGGGGAUGACGUC-AA--GUCAGCAUGCC chl.B.bite 2200 CCUUACGCCCUGGGCGAC-ACACGUGCUACAAUGGA--CGGGACAAAGGG chl.B.bite 2250 UC----GCGACCCC--------------------(----GCGA-)----- chl.B.bite 2300 --------------GGGC-AAGCUAACC-UCAA-AAACCCGACCUCAGUU chl.B.bite 2350 CGGAUUGCAGGC(--UGCAACUC)GCCUGCAUGAAGCCGGAAUCGCU--- chl.B.bite 2400 ---AGUAAU-CGCCGG(UC--AGCCAU)ACGGCGGUGAAUCC--GUU--- chl.B.bite 2450 -----------------CCCGGGCCUUGUACACACCGCCCGUCACACUAU chl.B.bite 2500 GGGAGCUGG-CCAUGCCCGAAGUCGUU---ACCUC-AACC-(-----gca chl.B.bite 2550 a------)-GG-AGG-GGG-GU-GCCG-AAGG-CAGGGCUAGUGACUGGA chl.B.bite 2600 GUGAAGUCGUAACAAnnnnnnnnnnnn(nnnn)nnnnnnnnnnnnnnnnn chl.B.bite 2650 nnnnnn--|~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ chl.B.bite 2700 ~~~~~~~~~~~~~~~~| chl.O.enge 0 |---------nnnnnnnnnnnnn-nn(n-nn)nnnn|nnnnnnnnnnnnn chl.O.enge 50 nnC-UGGCGGCAUGCUU--AACACAUGCAAGUCGGACG|AA--------- chl.O.enge 100 ----aagcauc(cc------------------agu-----)gguguuu-- chl.O.enge 150 ----------------UC--AGU--GGCGGACGGGUGAGUAA-CGCGUAA chl.O.enge 200 GA-ACCUGC-CCUU------------------------------------ chl.O.enge 250 -------------------------------------------------G chl.O.enge 300 GGG---------GGGGCCCAACAG------------------------CU chl.O.enge 350 G(GAAA)CGG-CUGCUAAUACC-CCAU-AG-------------------- chl.O.enge 400 ------------------GCU-------(GAGG---)-------AGC--- chl.O.enge 450 ---GAAAA----------------------GGA-------------(--- chl.O.enge 500 -----g-gaa-------)---------|----UCCGCCCAAGGA-GGG|G chl.O.enge 550 -CUUGCGU|-CUGAUUA-GCUGGUUGG-UG-AG(G-CAAUGG)-CUCACC chl.O.enge 600 AA|GGCGACGAU|CAGUAGCUG|GUCC(GAGA)GGAUGAUCAGC|CACAC chl.O.enge 650 UGGGA(CUGAGACACG)GCCCAGA-C--UCC(UA-CG)GG-A--GGCAG- chl.O.enge 700 CAGUGGGG-AAUUUUCCG-CAAU-GGGC-(-GAAA)-GCCU-GACGGA|G chl.O.enge 750 CAAUGCCGCGUGGAGGUAGAAGGCC(---CACG--)GG-UC--GUAAACU chl.O.enge 800 CC|UUUU-CCCGGAGAAGAAGC--------(--------)--------AA chl.O.enge 850 UGACG|GU-AUCU-GGGGAA-UAAGCAUC|GGCU-AACU-CUGUG(CCA- chl.O.enge 900 -GCAGCC|GCGGU---AA-)GACAGAG|GAUGCAAGCGUUAU-CCGGAAU chl.O.enge 950 GAUUGGGC|GUAAAGCGUCUGUAGGUG|GCUUUUCAAG-|UCU-GCCGUC chl.O.enge 1000 AAAUCCCAGGGC(------------------------------------- chl.O.enge 1050 ---------------------------------UCA)ACCCUGG-AC-GG chl.O.enge 1100 GCGGU--GGA-AAC-U|ACU-AA-G-CUGGAG-UA|CGGUA-----GGGG chl.O.enge 1150 CAGAG|GGAAUUUCCGG-UGGAGCG(GUGAAA)UGCGUAGAGA---UCGG chl.O.enge 1200 AAGGAACACCAAC---GGC(GAAA)GC|A|CUCUG-CUG|GGCCG--A-- chl.O.enge 1250 -------------------------------------------------- chl.O.enge 1300 ----------CACUGACACU|GAG-AGACGAAAGCUAGGGGAGCAAAUGG chl.O.enge 1350 G(AUU-A-GAUAC)-CCCAGUAG-|UC-CUA-GCUGUAAACGAUGGAU-- chl.O.enge 1400 --AC|UA|AGCG-CUGUGCG------------------(-------uauc chl.O.enge 1450 gacc-)-------------------------------------------- chl.O.enge 1500 |------------------------------|-CGUGCAGUGCU-GUAGC chl.O.enge 1550 (UAAC)GCGU-UAAGUAUCC|C|GCCUGGGGAGUACGUUC(GCAA)GAAU chl.O.enge 1600 GAAACUCAAAGGAAUUGACGGGGGCCC-GCACA-------AGCGGU|GGA chl.O.enge 1650 GCAUGUGGUUUAAUUCG-(AUGCAACG)CGAAGAACCUUACCAGGGCUUG chl.O.enge 1700 ACA----UG|-CC-GUG--AA------UCCUCUU-----(GAA-A-)GAG chl.O.enge 1750 GG-GAG---UG--CC---------(CUCG------)---------GGAA- chl.O.enge 1800 ---------------|CGCGGACA|C|AGGUGGUGCAUG|GCU|GUCGUC chl.O.enge 1850 A|-G-CUCGU|GCC(GUGA)GGUGUUGGG(UUAAGU)CCCGCAACGAGCG chl.O.enge 1900 CAACCCCCG|UGUUUA-G-UUGCCA-U----------------------- chl.O.enge 1950 -------------------------------------------------- chl.O.enge 2000 -------------------------------------------------- chl.O.enge 2050 -----------------------------(uauucaguuu)--------- chl.O.enge 2100 |GGAACCCUGAACAGACUGCCGGU(GAUAA----)--------------- chl.O.enge 2150 ---------GCCGGAGGAAGGUGGGGAUGACGUC-AA--GUCAGCAUGCC chl.O.enge 2200 CCUUACGCCCUGGGCGAC-ACACGUGCUACAAUGGA--CGGGACAAAGGG chl.O.enge 2250 UC----GCGACCCC--------------------(----GCGA-)----- chl.O.enge 2300 --------------GGGC-GAGCUAACC-UCAA-AAACCCGACCUCAGUU chl.O.enge 2350 CGGAUUGCAGGC(--UGCAACUC)GCCUGCAUGAAGCCGGAAUCGCU--- chl.O.enge 2400 ---AGUAAU-CGCCGG(UC--AGCCAU)ACGGCGGUGAAUCC--GUU--- chl.O.enge 2450 -----------------CCCGGGCCUUGUACACACCGCCCGUCACACUAU chl.O.enge 2500 GGGAGCUGG-CCAUGCCCGAAGUCGUU---GCCCC-AACC-(-----gca chl.O.enge 2550 a------)-GG-AGG-GGG-GU-GCCG-AAGG-CAGGGCUAGUGACUGGA chl.O.enge 2600 GUGAAGUCGUAACAAnnnnnnnnnnnn(nnnn)nnnnnnnnnnnnnnnnn chl.O.enge 2650 nnnnnn--|~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ chl.O.enge 2700 ~~~~~~~~~~~~~~~~| chl.P.nudu 0 |---------nnnnnnnnnnnnn-nn(n-nn)nnnn|nnnnnnnnnnnnn chl.P.nudu 50 nnC-UGGCGGCAUGCUU--AACACAUGCAAGUCGGACG|GA--------- chl.P.nudu 100 ----aagcauc(cc------------------agu-----)ggugcuu-- chl.P.nudu 150 ----------------UC--AGU--GGCGGACGGGUGAGUAA-CGCGUAA chl.P.nudu 200 GA-ACCCGC-CCUG------------------------------------ chl.P.nudu 250 -------------------------------------------------G chl.P.nudu 300 GGA---------GGGGGAUAACCG------------------------CU chl.P.nudu 350 G(GAAA)CGG-CUGCUAAUACC-CCAU-AG-------------------- chl.P.nudu 400 ------------------GCU-------(GAGG---)-------AGC--- chl.P.nudu 450 ---AAAAA----------------------GGA-------------(--- chl.P.nudu 500 ---gga-auaa------)---------|----UCCGCCCAAGGA-GGG|G chl.P.nudu 550 -CUUGCGU|-CUGAUUA-GCUAGUUGG-UG-AG(G-CAAUGG)-CUCACC chl.P.nudu 600 AA|GGCGACGAU|CAGUAGCUG|GUCC(GAGA)GGAUGAUCAGC|CACAC chl.P.nudu 650 UGGGA(CUGAGACACG)GCCCAGA-C--UCC(UA-CG)GG-A--GGCAG- chl.P.nudu 700 CAGUGAGG-AAUUUUCCG-CAAU-GGGC-(-GAAA)-GCCU-GACGGA|G chl.P.nudu 750 CAAUGCCGCGUGGAGGUAGAAGGCC(---UACG--)GG-UC--GUAAACU chl.P.nudu 800 CC|UUUU-CUCGGAGAAGAAGC--------(--------)--------AA chl.P.nudu 850 UGACG|GU-AUCU-GAGGAA-UAAGCAUC|GGCU-AACU-CUGUG(CCA- chl.P.nudu 900 -GCAGCC|GCGGU---AA-)GACAGAG|GAUGCAAGCGUUAU-CCGGAAU chl.P.nudu 950 GAUUGGGC|GUAAAGCGUCUGUAGGUG|GCUUCUCAAG-|UCC-GCCGUC chl.P.nudu 1000 AAAUCCCAGGGC(------------------------------------- chl.P.nudu 1050 ---------------------------------UCA)ACCCUGG-AC-GG chl.P.nudu 1100 GCGGU--GGA-AAC-U|ACU-AA-G-CUAGAG-UA|CGGUA-----GGGG chl.P.nudu 1150 CAGAG|GGAAUUUCCGG-UGGAGCG(GUGAAA)UGCGUAGAGA---UCGG chl.P.nudu 1200 AAAGAACACCAAU---GGC(GAAA)GC|A|CUCUG-CUG|GGCCG--A-- chl.P.nudu 1250 -------------------------------------------------- chl.P.nudu 1300 ----------CACUGACACU|GAG-AGACGAAAGCUAGGGGAGCGAAUGG chl.P.nudu 1350 G(AUU-A-GAUAC)-CCCAGUAG-|UC-CUA-GCCGUAAACGAUGGAU-- chl.P.nudu 1400 --AC|UA|AGCG-UUGUGCG------------------(-------uauu chl.P.nudu 1450 gacc-)-------------------------------------------- chl.P.nudu 1500 |------------------------------|-CGUGCAGUGCU-UUAGC chl.P.nudu 1550 (UAAC)GCGU-UAAGUAUCC|C|GCCUGGGGAGUACGUUC(GCAA)GAAU chl.P.nudu 1600 GAAACUCAAAGGAAUUGACGGGGGCCC-GCACA-------AGCGGU|GGA chl.P.nudu 1650 GCAUGUGGUUUAAUCCG-(AUGCAACG)CGAAGAACCUUACCAGGGCUUG chl.P.nudu 1700 ACA---ggu|-UU-GUG--AA------UCUUCUU-----(CAA-A-)AGG chl.P.nudu 1750 AA-GAG---UU--CC---------(UUCG------)---------GGAA- chl.P.nudu 1800 ---------------|CGCAGACA|C|AGGUGGUGCAUG|GCU|GUCGUC chl.P.nudu 1850 A|-G-CUCGU|GCC(GUAA)GGUGUUAGG(UUAAGU)CCCGCAACGAGCG chl.P.nudu 1900 CAACCCUCG|UGUUUA-G-UUGCCA-U----------------------- chl.P.nudu 1950 -------------------------------------------------- chl.P.nudu 2000 -------------------------------------------------- chl.P.nudu 2050 -----------------------------(uacugaguuu)--------- chl.P.nudu 2100 |GGAACCCUAAACAGACUGCCGGU(GAUAA----)--------------- chl.P.nudu 2150 ---------GCCGGAGGAAGGUGAGGAUGAUGUC-AA--GUCGGCAUGCC chl.P.nudu 2200 CCUUACGCCCUGGGCGAC-ACACGUGCUACAAUGGA--CGGGACAAAGGG chl.P.nudu 2250 UC----GCGACCCC--------------------(----GCGA-)----- chl.P.nudu 2300 --------------GGGC-AAGCUAACC-UCAA-AAACCCGACCCCAGUU chl.P.nudu 2350 CGGAUUGCAGGC(--UGCAACUC)GCCUGCAUGAAGCCGGAAUCGCU--- chl.P.nudu 2400 ---AGUAAU-CGCCGG(UC--AGCCAU)ACGGCGGUGAAUAC--GUU--- chl.P.nudu 2450 -----------------CUCGGGCCUUGUACACACCGCCCGUCACACUAU chl.P.nudu 2500 GGGAGCUGA-CCAUGCCCGAAGUCAUU---ACCCU-AACC-(-----gca chl.P.nudu 2550 a------)-GG-AGG-GGG-AU-GCCG-AAGG-CAGGGCUAGUGACUGGA chl.P.nudu 2600 GUGAAGUCGUAACAAGGUAGCCGUACU(GGAA)GGUGCGGnnnnnnnnnn chl.P.nudu 2650 nnnnnn--|~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ chl.P.nudu 2700 ~~~~~~~~~~~~~~~~| chl.T.obla 0 |---------nnnnnnnnnnnnn-nn(n-nn)nnnn|nnnnnnnnnnnnn chl.T.obla 50 nnC-UGGCGGCAUGCUU--AACACAUGCAAGUCGGACG|GA--------- chl.T.obla 100 --a-agcaucc(ca------------------gu------)gggaugc-- chl.T.obla 150 -uu-------------UC--AGU--GGCGGACGGGUGAGUAA-CGCGUAA chl.T.obla 200 GA-ACCCGC-CCUG------------------------------------ chl.T.obla 250 -------------------------------------------------G chl.T.obla 300 GGA---------GGGGGAUAACAG------------------------CU chl.T.obla 350 G(GAAA)CGG-CUGCUAAUACC-CCAU-AG-------------------- chl.T.obla 400 ------------------GCU-------(GAGG---)-------AGC--- chl.T.obla 450 ---AAAAA----------------------GGAU------------(--- chl.T.obla 500 -----g-caua------)---------|---AUCCGCCCAAGGA-GGG|G chl.T.obla 550 -CUUGCGU|-CUGAUUA-GCUAGUUGG-UG-AG(G-CAAUGG)-CUCACC chl.T.obla 600 AA|GGCGACGAU|CAGUAGCUG|GUCC(GAGA)GGAUGAUCAGC|CACAC chl.T.obla 650 UGGGA(CUGAGACACG)GCCCAGA-C--UCC(UA-CG)GG-A--GGCAG- chl.T.obla 700 CAGUGAGG-AAUUUUCCG-CAAU-GGGC-(-GAAA)-GCCU-GACGGA|G chl.T.obla 750 CAAUGCCGCGUGGAGGAAGAAGGCC(---UACG--)GG-UC--GUAAACU chl.T.obla 800 CC|UUUU-CUCGGAGAAGAAGC--------(--------)--------AA chl.T.obla 850 UGACG|GU-AUCU-GAGGAA-UAAGCAUC|GGCU-AACU-CUGUG(CCA- chl.T.obla 900 -GCAGCC|GCGGU---AA-)GACAGAG|GAUGCAAGCGUUAU-CCGGAAU chl.T.obla 950 GAUUGGGC|GUAAAGCGUCUGUAGGUG|GCUUCUCAAG-|UCC-GCCGUC chl.T.obla 1000 AAAUCCCAGGGC(------------------------------------- chl.T.obla 1050 ---------------------------------UCA)ACCCUGG-AC-GG chl.T.obla 1100 GCGAU--GGA-AAC-U|ACU-AA-G-CUAGAG-UA|CGGUA-----GGGG chl.T.obla 1150 CAGAG|GGAAUUUCCGG-UGGAGCG(GUGAAA)UGCGUAGAGA---UCGG chl.T.obla 1200 AAAGAACACCAAU---GGC(GAAA)GC|A|CUCUG-CUG|GGCCG--A-- chl.T.obla 1250 -------------------------------------------------- chl.T.obla 1300 ----------CACUGACACU|GAG-AGACGAAAGCUAGGGGAGCGAAUGG chl.T.obla 1350 G(AUU-A-GAUAC)-CCCAGUAG-|UC-CUA-GCCGUAAACGAUGGAU-- chl.T.obla 1400 --AC|UA|AGCG-UUGUGCG------------------(-------uauu chl.T.obla 1450 gacc-)-------------------------------------------- chl.T.obla 1500 |------------------------------|-CGUGCAGUGCU-UUAGC chl.T.obla 1550 (UAAC)GCGU-UAAGUAUCC|C|GCCUGGGGAGUACGUUC(GCAA)GAAU chl.T.obla 1600 GAAACUCAAAGGAAUUGACGGGGGCCC-GCACA-------AGCGGU|GGA chl.T.obla 1650 GCAUGUGGUUUAAUCCG-(AUGCAACG)CGAAGAACCUUACCAGGGCUUG chl.T.obla 1700 ACA--gguu|-UU-GUG--AA------UCUUCUU-----(CAA-A-)AGG chl.T.obla 1750 AA-GAG---UU--UCu--------(uucaa-----)c-------gGGAA- chl.T.obla 1800 ---------------|CACAGACA|C|AGGUGGUGCAUG|GCU|GUCGUC chl.T.obla 1850 A|-G-CUCGU|GCC(GUAA)GGUGUUAGG(UUAAGU)CCCGCAACGAGCG chl.T.obla 1900 CAACCCUCG|UGUUUA-G-UUGCCA-U----------------------- chl.T.obla 1950 -------------------------------------------------- chl.T.obla 2000 -------------------------------------------------- chl.T.obla 2050 -----------------------------(uacugaguuu)--------- chl.T.obla 2100 |GGAACCCUAAACAGACUGCCGGU(GAUAA----)--------------- chl.T.obla 2150 ---------GCCGGAGGAAGGUGAGGAUGAUGUC-AA--GUCGGCAUGCC chl.T.obla 2200 CCUUACGCCCUGGGCGAC-ACACGUGCUACAAUGGA--CGGGACAAAGGG chl.T.obla 2250 UC----GCGACCCC--------------------(----GCGA-)----- chl.T.obla 2300 --------------GGGC-AAGCUAACC-UCAA-AAACCCGACCCCAGUU chl.T.obla 2350 CGGAUUGCAGGC(--UGCAACUC)GCCUGCAUGAAGCCGGAAUCGCU--- chl.T.obla 2400 ---AGUAAU-CGCCGG(UC--AGCCAU)ACGGCGGUGAAUAC--GUU--- chl.T.obla 2450 -----------------CUCGGGCCUUGUACACACCGCCCGUCACACUAU chl.T.obla 2500 GGGAGCUGA-CCAUGCCCGAAGUCGUU---ACCCU-AACC-(-----gca chl.T.obla 2550 a------)-GG-AGG-GGG-AU-GCCG-AAGG-CAGGGCUAGUGACUGGA chl.T.obla 2600 GUGAAGUCGUAACAAnnnnnnnnnnnn(nnnn)nnnnnnnnnnnnnnnnn chl.T.obla 2650 nnnnnn--|~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ chl.T.obla 2700 ~~~~~~~~~~~~~~~~| chl.J.virg 0 |---------nnnnnnnnnnnnn-nn(n-nn)nnnn|nnnnnnnnnnnnn chl.J.virg 50 nnC-UGGCGGCAUGCUU--AACACAUGCAAGUCGAACG|GG--------- chl.J.virg 100 --------aag(ug------------------gug-----)uuu------ chl.J.virg 150 ----------------CC--AGU--GGCGAACGGGUGAGUAA-UGCGUAA chl.J.virg 200 GA-ACCUGC-CCUU------------------------------------ chl.J.virg 250 -------------------------------------------------G chl.J.virg 300 GGA---------GGGGAACAACAG------------------------CU chl.J.virg 350 G(GAAA)CGG-UUGCUAAUACC-CCAU-AGaauuuaguaccucuacgagg chl.J.virg 400 ugagguag----------GCU-------(GAGG---)-------AGC--- chl.J.virg 450 ---AAAAG----------------------GGA-------------(--- chl.J.virg 500 -----g-gaa-------)---------|----UCCGCCCAAGGA-GGG|G chl.J.virg 550 -CUCACGU|-CUGAUUA-GCUAGUUGG-UG-AG(G-CAAUGG)-CUUACC chl.J.virg 600 AA|GGCUCCGAU|CAGUAGUUG|GUCU(GAGA)GGAUGAUCAGC|CACAC chl.J.virg 650 UGGGA(CUGAGACACG)GCCCAGA-C--UCC(UA-CG)GG-A--GGCAG- chl.J.virg 700 CAGUGAGG-AAUUUUCCG-CAAU-GGGC-(-GAAA)-GCCU-GACGGA|G chl.J.virg 750 CAAUGCCGCGUGAAGGAAGAAGGCU(---CACG--)GG-UC--GUAAACU chl.J.virg 800 UC|UUUU-CUCGGAGAAGAAUA--------(--------)--------AA chl.J.virg 850 UGACG|GU-AUCU-GAGGAA-UAAGCAUC|GGCU-AACU-CUGUG(CCA- chl.J.virg 900 -GCAGCC|GCGGU---AA-)AACAGAG|GAUGCAAGCGUUAU-CCGGAAU chl.J.virg 950 UAUUGGGC|GUAAAGUGUCUGUAGGUG|GCUUUUCAAG-|UCC-GUCGUC chl.J.virg 1000 AAAUCCCAGGGC(------------------------------------- chl.J.virg 1050 ---------------------------------UCA)ACCCUGG-AC-AG chl.J.virg 1100 GCGGU--GGA-AAC-U|AUU-AA-G-CUAGAG-UA|CGGUA-----GAGG chl.J.virg 1150 CAGAG|GGAAUUUCCGG-UGGAGCG(GUGAAA)UGCGUUGAGA---UCGG chl.J.virg 1200 GAGGAACACCAAG---GGC(GAAA)GC|A|CUCUG-CUG|GGCCG--U-- chl.J.virg 1250 -------------------------------------------------- chl.J.virg 1300 ----------UACUGACACU|CAG-AGACGAAAGCUAGGGGAGCAAAUGG chl.J.virg 1350 G(AUU-A-GAUAC)-CCCAGUAG-|UC-CUA-GCCGUAAACGAUGGAU-- chl.J.virg 1400 --AC|UA|GGUG-CUGUGCG------------------(-------uauc chl.J.virg 1450 gacc-)-------------------------------------------- chl.J.virg 1500 |------------------------------|-CGUAUAGUACU-GCAGC chl.J.virg 1550 (UAAC)GCGU-UAAGUAUCC|C|GCCUGGGAAGUACGUUC(GCAA)GAAU chl.J.virg 1600 GAAACUCAAAGGAAUUGACGGGGGCCC-GCACA-------AGCGGU|GGA chl.J.virg 1650 GCAUGUGGUUUAAUUCG-(AUGCAAAG)CGAAGAACCUUACCAGGGAUUG chl.J.virg 1700 ACA----UG|-CC-GCG--AA------UCCUUUU-----(GAA-A-)AAG chl.J.virg 1750 AG-GAG---UG--CC---------(UUCG------)---------GGAA- chl.J.virg 1800 ---------------|CGCGGACA|C|AGGUGGUGCAUG|GCU|GUCGUC chl.J.virg 1850 A|-G-UUCGU|GCC(GCAA)GGUGUUGGG(UUAAGU)CCCGCAACGAGCG chl.J.virg 1900 CAACCCUCG|UGUUUA-G-UUGCCA-U----------------------- chl.J.virg 1950 -------------------------------------------------- chl.J.virg 2000 -------------------------------------------------- chl.J.virg 2050 -----------------------------(---aaaguuu)--------- chl.J.virg 2100 |GGAACUCUGAACAGACUAUCGGU(GUUAA----)--------------- chl.J.virg 2150 ---------GCCGGAGGAAGGUGAGGAUGAUGUC-AA--GUCAUCAUGCC chl.J.virg 2200 CCUUAUACCCUGGGCGAC-ACACGUGCUACAAUGGC--CGGGACAAAGAG chl.J.virg 2250 UU----GCGACCCC--------------------(----GCGA-)----- chl.J.virg 2300 --------------GGGU-AAGCUAACC-UCAA-AAACCUGGCCUCAAUU chl.J.virg 2350 CGGAUUGCAGGC(--UGCAACUC)GCCUGCAUGAAGUAGGAAUCGCU--- chl.J.virg 2400 ---AGUAAU-CGCCGG(UC--AGCCAU)ACGGCGGUGAAUUC--GUU--- chl.J.virg 2450 -----------------CUCGGGCCUUGUACACACCGCCCGUCACACUAG chl.J.virg 2500 GGAAGUGUG-CCAUGCUCGAAGUCAUU---AUCUU-AACC-(-----gca chl.J.virg 2550 a------)-GG-AGG-GAG-AU-GCCC-AAGG-CACGGCUAGUGACUGGA chl.J.virg 2600 GUGAAGUCGUAACAAGGUAGCCGUACU(nnnn)nnnnnnnnnnnnnnnnn chl.J.virg 2650 nnnnnn--|~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ chl.J.virg 2700 ~~~~~~~~~~~~~~~~| chl.P.thun 0 |~~~~~~~~~~~CUCAUGGAGAG-UU(U-GA)UCCU|GGCUCAGGAUGAA chl.P.thun 50 CGC-UGGCGGCAUGCUU--AACACAUGCAAGUCGGACG|GG--------- chl.P.thun 100 --------aag(ug------------------gug-----)uuu------ chl.P.thun 150 ----------------CC--AGU--GGCGGACGGGUGAGUAA-CGCGUAA chl.P.thun 200 GA-ACCUGC-CCUU------------------------------------ chl.P.thun 250 -------------------------------------------------G chl.P.thun 300 GGA---------GGGGAACAACAG------------------------CU chl.P.thun 350 G(GAAA)CGG-CUGCUAAUACC-CCAU-AG-------------------- chl.P.thun 400 ------------------GCU-------(GAGG---)-------AGC--- chl.P.thun 450 ---AAAA-----------------------GGA-------------(--- chl.P.thun 500 -------GGAA------)---------|----UCCGCCCAAGGAG-GG-G chl.P.thun 550 C-UCGCGU|-CUGAUUA-GUUAGUUGG-UG-AG(G-CAAUGG)-CUUACC chl.P.thun 600 AA|GGCGACGAU|CAGUAGCUG|GUCC(GAGA)GGAUGAUCAGC|CACAC chl.P.thun 650 UGGGA(CUGAGACACG)GCCCAGA-C--UCC(UAC-G)GG-A--GGCAG- chl.P.thun 700 CAGUGGGG-AAUUUUCCG-CAAU-GGGC-(-GAAA)-GCCU-GACGGA|G chl.P.thun 750 CAAUGCCGCGUGAAGGCAGAAGGCC(---CACG--)GG-UC--AUGAACU chl.P.thun 800 UC|UUUU-CUCGGAGAAGAAAA--------(--------)--------AA chl.P.thun 850 UGACG|GU-AUCU-GAGGAA-UAAGCAUC|GGCU-AACU-CUGUG(CCA- chl.P.thun 900 -GCAGCC|GCGGU---AA-)GACAGAG|GAUGCAAGCGUUAU-CCGGAAU chl.P.thun 950 GAUUGGGC|GUAAAGCGUCUGUAGGUG|GCUUUUCAAG-|UCC-GCCGUC chl.P.thun 1000 AAAUCCCAGGGC(------------------------------------- chl.P.thun 1050 ---------------------------------UCA)ACCCUGG-AC-AG chl.P.thun 1100 GCGGU--GGA-AAC-U|ACC-AA-G-CUGGAG-UA|CGGUA-----GGGG chl.P.thun 1150 CAGAG|GGAAUUUCCGG-UGGAGCG(GUGAAA)UGCGUUGAGA---UCGG chl.P.thun 1200 AAAGAACACCAAC---GGC(GAAA)GC|A|CUCUG-CUG|GGCCG--A-- chl.P.thun 1250 -------------------------------------------------- chl.P.thun 1300 ----------CACUGACACU|GAG-AGACGAAAGCUAGGGGAGCAAAUGG chl.P.thun 1350 G(AUU-A-GAUAC)-CCCAGUAG-|UC-CUA-GCCGUAAACGAUGGAU-- chl.P.thun 1400 --AC|UA|AGUG-CUGUGCG------------------(-------uauc chl.P.thun 1450 gacc-)-------------------------------------------- chl.P.thun 1500 |------------------------------|-CGCGCAGUGCU-GUAGC chl.P.thun 1550 (UAAC)GCGU-UAAGUAUCC|C|GCCUGGGGAGUACGUUC(GCAA)GAAU chl.P.thun 1600 GAAACUCAAAGGAAUUGACGGGGGCCC-GCACA-------AGCGGU|GGA chl.P.thun 1650 GCAUGUGGUUCAAUUCG-(AUGCAAAG)CGAAGAACCUUACCAGGGCUUG chl.P.thun 1700 ACA----UG|-CC-GUG--AA------UCCUCCC-----(GAA-A-)GAG chl.P.thun 1750 AG-GAG---UG--CC---------(UUCG------)---------GGAA- chl.P.thun 1800 ---------------|CGCGGACA|C|AGGUGGUGCAUG|GCU|GUCGUC chl.P.thun 1850 A|-G-CUCGU|GCC(GUAA)GGUGUUGGG(UUAAGU)CCCGCAACGAGCG chl.P.thun 1900 CAACCCUCG|UGUUUA-G-UUGCCa------------------------- chl.P.thun 1950 -------------------------------------------------- chl.P.thun 2000 -------------------------------------------------- chl.P.thun 2050 -----------------------------(gcauuuaguu)--------u chl.P.thun 2100 |GGAACCCUGAACAGACUGCCGGU(GAUAA----)--------------- chl.P.thun 2150 ---------GCCGGAGGAAGGUGAGGAUGACGUC-AA--GUCAUCAUGCC chl.P.thun 2200 CCUUACGCCCUGGGCGAC-ACACGUGCUACAAUGAC--CGGGACAAAGGG chl.P.thun 2250 UC----GCGACCCC--------------------(----GCGA-)----- chl.P.thun 2300 --------------GGGC-AAGCUAACC-UCAA-AAACCCGGCCUCAGUU chl.P.thun 2350 CGGAUUGCAGGC(--UGCAACUC)GCCUGCAUGAAGCCGGAAUCGCU--- chl.P.thun 2400 ---AGUAAU-CGCCGG(UC--AGCCAU)ACGGCGGUGAAUCC--GUU--- chl.P.thun 2450 -----------------CCCGGGCCUUGUACACACCGCCCGUCACACUAU chl.P.thun 2500 GGGAGCUGG-CCAUGCCCCAAGUCGUU---ACCUU-AACC-(-----gca chl.P.thun 2550 a------)-GG-AGG-GGG-AU-GCCG-AAGG-CUGGGCUAGUGACUGGA chl.P.thun 2600 GUGAAGUCGUAACAAGGUAGCCGUACU(GGAA)GGUGCGGCUGGAUCACC chl.P.thun 2650 UCCUUU--|~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ chl.P.thun 2700 ~~~~~~~~~~~~~~~~| chl.E.trif 0 |---------nnnnnnnnnnnnn-nn(n-nn)nnnn|nnnnnnnnnnnnn chl.E.trif 50 nnC-UGGCGGCAUGCUU--AACACAUGCAAGUCGAACG|GG--------- chl.E.trif 100 --------aag(ug------------------gug-----)uuu------ chl.E.trif 150 ----------------CC--GGU--GGCGGACGGGUGAGUAA-UGCGUGA chl.E.trif 200 GA-ACCUGC-CCUU------------------------------------ chl.E.trif 250 -------------------------------------------------G chl.E.trif 300 GGA---------GGGGAACAACAG------------------------CU chl.E.trif 350 G(GAAA)CGG-CAGCUAAUACC-CCAU-AG-------------------- chl.E.trif 400 ------------------GCU-------(GAGG---)-------AGC--- chl.E.trif 450 ---AAAA-----------------------GGA-------------(--- chl.E.trif 500 -----g-gaa-------)---------|----UCUGCCCAAGGA-GGG|G chl.E.trif 550 -CUCACGU|-CUGAUUA-GUUAGUUGG-UG-AG(G-CAAUGG)-CUUACC chl.E.trif 600 AA|GGCGACGAU|CAGUAGCUG|GUCU(GAGA)GGAUGAUCAGC|CACAC chl.E.trif 650 UGGGA(CUGAGACACG)GCCCAGA-C--UCC(UA-CG)GG-A--GGCAG- chl.E.trif 700 CAGUGGGG-AAUUUUCCG-CAAU-GGGC-(-GAAA)-GCCU-GACGGA|G chl.E.trif 750 CAAUGCCGCGUGAAGGCAGAAGGCC(---UACG--)GG-UU--GUGAACU chl.E.trif 800 UC|UUUU-CUCGGAGAAGAAGC--------(--------)--------AA chl.E.trif 850 UGACG|GU-AUCU-GAGGAA-UAAGCAUC|GGCC-AACU-CUGUG(CCA- chl.E.trif 900 -GCAGCC|GCGGU---AA-)UACAGAG|GAUGCAAGCGUUAU-CCGGAUU chl.E.trif 950 UAUUGGGC|GUAAAGUGUCUUUAGGUG|GCUUUUCAAG-|UCC-UCCGUU chl.E.trif 1000 AAAUCCCAGGGC(------------------------------------- chl.E.trif 1050 ---------------------------------UCA)ACCCUGG-AC-AG chl.E.trif 1100 GCGUU--GGA-AAC-U|ACA-AA-G-CUAGAG-UA|CGGUA-----GGGG chl.E.trif 1150 CAGAG|GGAAUUUCCGG-UGGAGCG(GUGAAA)UGCGCUGAGA---UCGG chl.E.trif 1200 AAAGAACACCAAU---GGC(GAAA)GC|A|CUCUG-CUG|GACCG--A-- chl.E.trif 1250 -------------------------------------------------- chl.E.trif 1300 ----------CACUGACACU|GAG-AGACGAAAGCUAGGGGAGCGAAUGG chl.E.trif 1350 G(AUU-A-GAGAC)-CCCAGUAG-|UC-CUA-GCCGUAAACAAUGGAU-- chl.E.trif 1400 --AC|UA|AGUG-CUGUGCG------------------(-------uauc chl.E.trif 1450 gacc-)-------------------------------------------- chl.E.trif 1500 |------------------------------|-CGUGCAGUGCU-GUAGU chl.E.trif 1550 (UAAC)GCGU-UAAGUAUCC|C|GCCUGGGGAGUACGUUC(GCAA)GAAU chl.E.trif 1600 GAAACUCAAAGGAAUUGACGGGGGCCC-GCACA-------AGCGGU|GGA chl.E.trif 1650 GCAUGUAGUUUAAUUCG-(AUGCAAAG)CGAAGAACCUUACCAGGGAUUG chl.E.trif 1700 ACA----UG|-CC-GUG--AA------UCCUCCU-----(GAA-A-)AGG chl.E.trif 1750 GG-GAG---UG--CC---------(UUCG------)---------GGAA- chl.E.trif 1800 ---------------|CACGGACA|C|AGGUGGUGCAUG|GCU|GUCGUC chl.E.trif 1850 A|-G-CUCGU|GCC(GUAG)GGUGUUGGG(UUAAGU)CCCGCAACGAGCG chl.E.trif 1900 CAACCCUUU|UGUUUA-G-UUGCCA-U----------------------- chl.E.trif 1950 -------------------------------------------------- chl.E.trif 2000 -------------------------------------------------- chl.E.trif 2050 -----------------------------(cguguaguuu)--------- chl.E.trif 2100 |GGAACCCUAAACAGACUGCUGGC(GAUGA----)--------------- chl.E.trif 2150 ---------GCCGGAGGAAGGUGAGGAUGAGGUC-AA--GUCAUCAUGCC chl.E.trif 2200 CCUUAUACCCUGGGCCAC-ACACAUGCUACAAUGGC--CGGGAUAAAGGG chl.E.trif 2250 UC----GCGACCUC--------------------(----GUGA-)----- chl.E.trif 2300 --------------GGGC-AAGCUAAUC-UCAA-AAACCCGGUCUCAGUU chl.E.trif 2350 CGAAUUGCAGGC(--UGCAACUC)GCCUGCAUGAAGCAGGAAUCGCU--- chl.E.trif 2400 ---AGUAAU-CGCCGG(UC--AGCCAU)ACGGCGGUGAAUUC--GUU--- chl.E.trif 2450 -----------------CUCGGGCCUUGUACACACCGCCCGUCACACUAU chl.E.trif 2500 AGGAGUUGG-CCAUGUUUGAAGUCUUU---ACCUU-AACC-(-----gua chl.E.trif 2550 a------)-GG-AGG-GGG-AU-GACA-AAGG-CAGGGUUAGUGACUGGA chl.E.trif 2600 GUGAAGUCGUAACAAGGUAGCCGUACU(nnnn)nnnnnnnnnnnnnnnnn chl.E.trif 2650 nnnnnn--|~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ chl.E.trif 2700 ~~~~~~~~~~~~~~~~| chl.O.sati 0 |~~~~~~~~~~UCUCAUGGAGAG-UU(C-GA)UCCU|GGCUCAGGAUGAA chl.O.sati 50 CGC-UGGCGGCAUGCUU--AACACAUGCAAGUCGAACG|GG--------- chl.O.sati 100 -------aagu(gg------------------u-------)guuu----- chl.O.sati 150 ----------------CC--AGU--GGCGAACGGGUGAGUAA-CGCGUAA chl.O.sati 200 GA-ACCUGC-CCUU------------------------------------ chl.O.sati 250 -------------------------------------------------G chl.O.sati 300 GGA---------GGGGAACAACAA------------------------CU chl.O.sati 350 G(GAAA)CGG-UUGCUAAUACC-CCGU-AG-------------------- chl.O.sati 400 ------------------GCU-------(GAGG---)-------AGC--- chl.O.sati 450 ---AAAA-----------------------GGA-------------(--- chl.O.sati 500 -------GAAA------)---------|----UCCGCCCAAGGA-GGG|G chl.O.sati 550 -CUCGCGU|-CUGAUUA-GCUAGUUGG-UG-AG(G-CAAUAG)-CUUACC chl.O.sati 600 AA|GGCGAUGAU|CAGUAGCUG|GUCC(GAGA)GGAUGAUCAGC|CACAC chl.O.sati 650 UGGGA(CUGAGACACG)GCCCAGA-C--UCC(UA-CG)GG-A--GGCAG- chl.O.sati 700 CAGUGGGG-AAUUUUCCG-CAAU-GGGC-(-GAAA)-GCCU-GACGGA|G chl.O.sati 750 CAAUGCCGCGUGGAGGUGGAAGGCC(---CACG--)GG-UC--GUCAACU chl.O.sati 800 UC|UUUU-CUCGGAGAAGAAAC--------(--------)--------AA chl.O.sati 850 UGACG|GU-AUCU-GAGGAA-UAAGCAUC|GGCU-AACU-CUGUG(CCA- chl.O.sati 900 -GCAGCC|GCGGU---AA-)GACAGAG|GAUGCAAGCGUUAU-CCGGAAU chl.O.sati 950 GAUUGGGC|GUAAAGCGUCUGUAGGUG|GCUUUUCAAG-|UCC-GCCGUC chl.O.sati 1000 AAAUCCCAGGGC(------------------------------------- chl.O.sati 1050 ---------------------------------UCA)ACCCUGG-AC-AG chl.O.sati 1100 GCGGU--GGA-AAC-U|ACC-AA-G-CUGGAG-UA|CGGUA-----GGGG chl.O.sati 1150 CAGAG|GGAAUUUCCGG-UGGAGCG(GUGAAA)UGCAUUGAGA---UCGG chl.O.sati 1200 AAAGAACACCAAC---GGC(GAAA)GC|A|CUCUG-CUG|GGCCG--A-- chl.O.sati 1250 -------------------------------------------------- chl.O.sati 1300 ----------CACUGACACU|GAG-AGACGAAAGCUAGGGGAGCAAAUGG chl.O.sati 1350 G(AUU-A-GAGAC)-CCCAGUAG-|UC-CUA-GCCGUAAACGAUGGAU-- chl.O.sati 1400 --AC|UA|GGUG-CUGUGCG------------------(-------acuc chl.O.sati 1450 gacc-)-------------------------------------------- chl.O.sati 1500 |------------------------------|-CGUGCAGUGCU-GUAGC chl.O.sati 1550 (UAAC)GCGU-UAAGUAUCC|C|GCCUGGGGAGUACGUUC(GCAA)GAAU chl.O.sati 1600 GAAACUCAAAGGAAUUGACGGGGGCCC-GCACA-------AGCGGU|GGA chl.O.sati 1650 GCAUGUGGUUUAAUUCG-(AUGCAAAG)CGAAGAACCUUACCAGGGCUUG chl.O.sati 1700 ACA----UG|-CC-GCG--AA------UCCUCUU-----(GAA-A-)GAG chl.O.sati 1750 AG-GGG---UG--CC---------(CUCG------)---------GGAA- chl.O.sati 1800 ---------------|CGCGGACA|C|AGGUGGUGCAUG|GCU|GUCGUC chl.O.sati 1850 A|-G-CUCGU|GCC(GUAA)GGUGUUGGG(UUAAGU)CUCGCAACGAGCG chl.O.sati 1900 CAACCCUCG|UGUUUA-G-UUGCCa------------------------- chl.O.sati 1950 -------------------------------------------------- chl.O.sati 2000 -------------------------------------------------- chl.O.sati 2050 -----------------------------(cuau-gaguu)--------u chl.O.sati 2100 |GGAACCCUGAACAGACCGCCGGU(GUUAA----)--------------- chl.O.sati 2150 ---------GCCGGAGGAAGGAGAGGAUGAGGCC-AA--GUCAUCAUGCC chl.O.sati 2200 CCUUAUGCCCUGGGCGAC-ACACGUGCUACAAUGGG--CGGGACAAAGGG chl.O.sati 2250 UC----GCGAUCUC--------------------(----GCGA-)----- chl.O.sati 2300 --------------GGGU-GAGCUAACU-CCAA-AAACCCGUCCUCAGUU chl.O.sati 2350 CGGAUUGCAGGC(--UGCAACUC)GCCUGCAUGAAGCAGGAAUCGCU--- chl.O.sati 2400 ---AGUAAU-CGCCGG(UC--AGCCAU)ACGGCGGUGAAUCC--GUU--- chl.O.sati 2450 -----------------CCCGGGCCUUGUACACACCGCCCGUCACACUAU chl.O.sati 2500 AGGAGCUGG-CCAUGUUUGAAGUCAUU---ACCCUUAACC-(-----gua chl.O.sati 2550 a------)-GG-AGG-GGG-AU-GCCU-AAGG-CUAGGCUUGCGACUGGA chl.O.sati 2600 GUGAAGUCGUAACAAGGUAGCCGUACU(GGAA)GGUGCGGCUGGAUCACC chl.O.sati 2650 UCCUUU--|~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ chl.O.sati 2700 ~~~~~~~~~~~~~~~~| chl.Z.ma.1 0 |~~~~~~~~~~~CUCAUGGAGAG-UU(C-GA)UCCU|GGCUCAGGAUGAA chl.Z.ma.1 50 CGC-UGGCGGCAUGCUU--AACACAUGCAAGUCGAACG|GG--------- chl.Z.ma.1 100 -------aagu(gg------------------u-------)guuu----- chl.Z.ma.1 150 ----------------CC--AGU--GGCGAACGGGUGAGUAA-CGCGUAA chl.Z.ma.1 200 GA-ACCUGC-CCUU------------------------------------ chl.Z.ma.1 250 -------------------------------------------------G chl.Z.ma.1 300 GGA---------GGGGAACAACAA------------------------CU chl.Z.ma.1 350 G(GAAA)CGG-UUGCUAAUACC-CCGU-AG-------------------- chl.Z.ma.1 400 ------------------GCU-------(GAGG---)-------AGC--- chl.Z.ma.1 450 ---AAAA-----------------------GGA-------------(--- chl.Z.ma.1 500 -------GAAA------)---------|----UCCGCCCAAGGA-GGG|G chl.Z.ma.1 550 -CUCGCGU|-CUGAUUA-GCUAGUUGG-UG-AG(G-CAAUAG)-CUUACC chl.Z.ma.1 600 AA|GGCGAUGAU|CAGUAGCUG|GUCC(GAGA)GGAUGAUCAGC|CACAC chl.Z.ma.1 650 UGGGA(CUGAGACACG)GCCCAGA-C--UCC(UA-CG)GG-A--GGCAG- chl.Z.ma.1 700 CAGUGGGG-AAUUUUCCG-CAAU-GGGC-(-GAAA)-GCCU-GACGGA|G chl.Z.ma.1 750 CAAUGCCGCGUGGAGGUGGAAGGCC(---UACG--)GG-UC--GUCAACU chl.Z.ma.1 800 UC|UUUU-CUCGGAGAAGAAAC--------(--------)--------AA chl.Z.ma.1 850 UGACG|GU-AUCU-GAGGAA-UAAGCAUC|GGCU-AACU-CUGUG(CCA- chl.Z.ma.1 900 -GCAGCC|GCGGU---AA-)GACAGAG|GAUGCAAGCGUUAU-CCGGAAU chl.Z.ma.1 950 GAUUGGGC|GUAAAGCGUCUGUAGGUG|GCUUUUCAAG-|UCC-GCCGUC chl.Z.ma.1 1000 AAAUCCCAGGGC(------------------------------------- chl.Z.ma.1 1050 ---------------------------------UCA)ACCCUGG-AC-AG chl.Z.ma.1 1100 GCGGU--GGA-AAC-U|ACC-AA-G-CUGGAG-UA|CGGUA-----GGGG chl.Z.ma.1 1150 CAGAG|GGAAUUUCCGG-UGGAGCG(GUGAAA)UGCAUUGAGA---UCGG chl.Z.ma.1 1200 AAAGAACACCAAC---GGC(GAAA)GC|A|CUCUG-CUG|GGCCG--A-- chl.Z.ma.1 1250 -------------------------------------------------- chl.Z.ma.1 1300 ----------CACUGACACU|GAG-AGACGAAAGCUAGGGGAGCAAAUGG chl.Z.ma.1 1350 G(AUU-A-GAGAC)-CCCAGUAG-|UC-CUA-GCCGUAAACGAUGGAU-- chl.Z.ma.1 1400 --AC|UA|GGUG-CUGUGCG------------------(-------acuc chl.Z.ma.1 1450 gacc-)-------------------------------------------- chl.Z.ma.1 1500 |------------------------------|-CGUGCAGUGCU-GUAGC chl.Z.ma.1 1550 (UAAC)GCGU-UAAGUAUCC|C|GCCUGGGGAGUACGUUC(GCAA)GAAU chl.Z.ma.1 1600 GAAACUCAAAGGAAUUGACGGGGGCCC-GCACA-------AGCGGU|GGA chl.Z.ma.1 1650 GCAUGUGGUUUAAUUCG-(AUGCAAGG)CGAAGAACCUUACCAGGGCUUG chl.Z.ma.1 1700 ACA----UG|-CC-GCG--AA------UCCUCUU-----(GAA-A-)GAG chl.Z.ma.1 1750 AG-GGG---UG--CC---------(CUCG------)---------GGAA- chl.Z.ma.1 1800 ---------------|CGCGGACA|C|AGGUGGUGCAUG|GCU|GUCGUC chl.Z.ma.1 1850 A|-G-CUCGU|GCC(GUAA)GGUGUUGGG(UUAAGU)CUCGCAACGAGCG chl.Z.ma.1 1900 CAACCCUCG|UGUUUA-G-UUGCCa------------------------- chl.Z.ma.1 1950 -------------------------------------------------- chl.Z.ma.1 2000 -------------------------------------------------- chl.Z.ma.1 2050 -----------------------------(cuau-gaguu)--------u chl.Z.ma.1 2100 |GGAACCCUGAACAGACCGCCGGU(GUUAA----)--------------- chl.Z.ma.1 2150 ---------GCCGGAGGAAGGAGAGGAUGAGGCC-AA--GUCAUCAUGCC chl.Z.ma.1 2200 CCUUAUGCCCUGGGCGAC-ACACGUGCUACAAUGGG--CGGGACAAAGGG chl.Z.ma.1 2250 UC----GCGAUCUC--------------------(----GCGA-)----- chl.Z.ma.1 2300 --------------GGGU-GAGCUAACU-CCAA-AAACCCGUCCUCAGUU chl.Z.ma.1 2350 CGGAUUGCAGGC(--UGCAACUC)GCCUGCAUGAAGCAGGAAUCGCU--- chl.Z.ma.1 2400 ---AGUAAU-CGCCGG(UC--AGCCAU)ACGGCGGCGAAUCC--GUU--- chl.Z.ma.1 2450 -----------------CCCGGGCCUUGUACACACCGCCCGUCACACUAU chl.Z.ma.1 2500 AGGAGCUGG-CCAGGUUUGAAGUCAUU---ACCCUuAACC-(-----gua chl.Z.ma.1 2550 a------)-GG-AGG-GGG-AU-GCCU-AAGG-CUAGGCUUGCGACUGGA chl.Z.ma.1 2600 GUGAAGUCGUAACAAGGUAGCCGUACU(GGAA)GGUGCGGCUGGAUCACC chl.Z.ma.1 2650 UCCUUU--|~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ chl.Z.ma.1 2700 ~~~~~~~~~~~~~~~~| chl.Z.ma.2 0 |----------uCUCAUGGAGAG-UU(C-GA)UCCU|GGCUCAGGAUGAA chl.Z.ma.2 50 CGC-UGGCGGCAUGCUU--AACACAUGCAAGUCGAACG|GG--------- chl.Z.ma.2 100 -------aagu(gg------------------u-------)guuu----- chl.Z.ma.2 150 ----------------CC--AGU--GGCGAACGGGUGAGUAA-CGCGUAA chl.Z.ma.2 200 GA-ACCUGC-CCUU------------------------------------ chl.Z.ma.2 250 -------------------------------------------------G chl.Z.ma.2 300 GGA---------GGGGAACAACAA------------------------CU chl.Z.ma.2 350 G(GAAA)CGG-UUGCUAAUACC-CCGU-AG-------------------- chl.Z.ma.2 400 ------------------GCU-------(GAGG---)-------AGC--- chl.Z.ma.2 450 ---AAAA-----------------------GGA-------------(--- chl.Z.ma.2 500 -------GAAA------)---------|----UCCGCCCAAGGA-GGG|G chl.Z.ma.2 550 -CUCGCGU|-CUGAUUA-GCUAGUUGG-UG-AG(G-CAAUAG)-CUUACC chl.Z.ma.2 600 AA|GGCGAUGAU|CAGUAGCUG|GUCC(GAGA)GGAUGAUCAGC|CACAC chl.Z.ma.2 650 UGGGA(CUGAGACACG)GCCCAGA-C--UCC(UA-CG)GG-A--GGCAG- chl.Z.ma.2 700 CAGUGGGG-AAUUUUCCG-CAAU-GGGC-(-GAAA)-GCCU-GACGGA|G chl.Z.ma.2 750 CAAUGCCGCGUGGAGGUGGAAGGCC(---UACG--)GG-UC--GUCAACU chl.Z.ma.2 800 UC|UUUU-CUCGGAGAAGAAAC--------(--------)--------AA chl.Z.ma.2 850 UGACG|GU-AUCU-GAGGAA-UAAGCAUC|GGCU-AACU-CUGUG(CCA- chl.Z.ma.2 900 -GCAGCC|GCGGU---AA-)GACAGAG|GAUGCAAGCGUUAU-CCGGAAU chl.Z.ma.2 950 GAUUGGGC|GUAAAGCGUCUGUAGGUG|GCUUUUCAAG-|UCC-GCCGUC chl.Z.ma.2 1000 AAAUCCCAGGGC(------------------------------------- chl.Z.ma.2 1050 ---------------------------------UCA)ACCCUGG-AC-AG chl.Z.ma.2 1100 GCGGU--GGA-AAC-U|ACC-AA-G-CUGGAG-UA|CGGUA-----GGGG chl.Z.ma.2 1150 CAGAG|GGAAUUUCCGG-UGGAGCG(GUGAAA)UGCAUUGAGA---UCGG chl.Z.ma.2 1200 AAAGAACACCAAC---GGC(GAAA)GC|A|CUCUG-CUG|GGCCG--A-- chl.Z.ma.2 1250 -------------------------------------------------- chl.Z.ma.2 1300 ----------CACUGACACU|GAG-AGACGAAAGCUAGGGGAGCAAAUGG chl.Z.ma.2 1350 G(AUU-A-GAGAC)-CCCAGUAG-|UC-CUA-GCCGUAAACGAUGGAU-- chl.Z.ma.2 1400 --AC|UA|GGUG-CUGUGCG------------------(-------acuc chl.Z.ma.2 1450 gacc-)-------------------------------------------- chl.Z.ma.2 1500 |------------------------------|-CGUGCAGUGCU-GUAGC chl.Z.ma.2 1550 (UAAC)GCGU-UAAGUAUCC|C|GCCUGGGGAGUACGUUC(GCAA)GAAU chl.Z.ma.2 1600 GAAACUCAAAGGAAUUGACGGGGGCCC-GCACA-------AGCGGU|GGA chl.Z.ma.2 1650 GCAUGUGGUUUAAUUCG-(AUGCAAGG)CGAAGAACCUUACCAGGGCUUG chl.Z.ma.2 1700 ACA----UG|-CC-GCG--AA------UCCUCUU-----(GAA-A-)GAG chl.Z.ma.2 1750 AG-GGG---UG--CC---------(CUCG------)---------GGAA- chl.Z.ma.2 1800 ---------------|CGCGGACA|C|AGGUGGUGCAUG|GCU|GUCGUC chl.Z.ma.2 1850 A|-G-CUCGU|GCC(GUAA)GGUGUUGGG(UUAAGU)CUCGCAACGAGCG chl.Z.ma.2 1900 CAACCCUCG|UGUUUA-G-UUGCCa------------------------- chl.Z.ma.2 1950 -------------------------------------------------- chl.Z.ma.2 2000 -------------------------------------------------- chl.Z.ma.2 2050 -----------------------------(cuau-gaguu)--------u chl.Z.ma.2 2100 |GGAACCCUGAACAGACCGCCGGU(GUUAA----)--------------- chl.Z.ma.2 2150 ---------GCCGGAGGAAGGAGAGGAUGAGGCC-AA--GUCAUCAUGCC chl.Z.ma.2 2200 CCUUAUGCCCUGGGCGAC-ACACGUGCUACAAUGGG--CGGGACAAAGGG chl.Z.ma.2 2250 UC----GCGAUCUC--------------------(----GCGA-)----- chl.Z.ma.2 2300 --------------GGGU-GAGCUAACU-CCAA-AAACCCGUCCUCAGUU chl.Z.ma.2 2350 CGGAUUGCAGGC(--UGCAACUC)GCCUGCAUGAAGCAGGAAUCGCU--- chl.Z.ma.2 2400 ---AGUAAU-CGCCGG(UC--AGCCAU)ACGGCGGCGAAUCC--GUU--- chl.Z.ma.2 2450 -----------------CCCGGGCCUUGUACACACCGCCCGUCACACUAU chl.Z.ma.2 2500 AGGAGCUGG-CCAGGUUUGAAGUCAUU---ACCCUuAACC-(-----gua chl.Z.ma.2 2550 a------)-GG-AGG-GGG-AU-GCCU-AAGG-CUAGGCUUGCGACUGGA chl.Z.ma.2 2600 GUGAAGUCGUAACAAGGUAGCCGUACU(GGAA)GGUGCGGCUGGAUCACC chl.Z.ma.2 2650 UCCUUU--|~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ chl.Z.ma.2 2700 ~~~~~~~~~~~~~~~~| chl.D.caro 0 |~~~~~~~~~~UCUCAUGGAGAG-UU(C-GA)UCCU|GGCUCAGGAUGAA chl.D.caro 50 CGC-UGGCGGCAUGGAA--AACACAUGCAAGUCGGACG|GG--------- chl.D.caro 100 -------aagu(gg------------------u-------)guuu----- chl.D.caro 150 ----------------CC--AGU--GGCGGACGGGACUGUAA-CGCGUAA chl.D.caro 200 GA-ACCUGC-CCUU------------------------------------ chl.D.caro 250 -------------------------------------------------G chl.D.caro 300 GGU---------GGGGAACAACAG------------------------CU chl.D.caro 350 G(GAAA)CGG-CUGCUAAUACC-CCGU-AG-------------------- chl.D.caro 400 ------------------GCU-------(GAGG---)-------AGC--- chl.D.caro 450 ---AAAA-----------------------GGA-------------(--- chl.D.caro 500 -------GGAA------)---------|----UCCGCCCGAGGG-AGG|G chl.D.caro 550 GCUCGCGU|-CUGA-UA-GCUAGUUGG-UG-AG(G-CAAUAG)-CUUACC chl.D.caro 600 AA|GGCGAUGAU|CAGUAGCUG|GUCC(GAGA)GGAUGAUCAGC|CACAC chl.D.caro 650 UGGGA(CUGAGACACG)GCCCAGA-C--UCC(UA-CG)GG-A--GGCAG- chl.D.caro 700 CAGUGGGG-AAUUUUCCG-CAAU-GGGC-(-GAAA)-GC---GACGGA|G chl.D.caro 750 CAAUGCCGCGUGGAGGUAGAAGGCC(---CACG--)GG-UC--GUGAACU chl.D.caro 800 UC|UUUU-CCCGGAGAAGAAGC--------(--------)--------AA chl.D.caro 850 UGACG|GU-AUCU-GGGGAA-UAAGCAUC|GGCU-AACU-CUGUG(CCA- chl.D.caro 900 -GCAGCC|GCGGUUUUAA-)~~~~~~~|~~~~~~~~~~~~~~-~~~~~~~ chl.D.caro 950 ~~~~~~~~|~~~~~~~~~~~~~~~~~~|~~~~~~~~~G-|UCC-GCCGUC chl.D.caro 1000 AAAUCCCAGGGC(------------------------------------- chl.D.caro 1050 ---------------------------------UCA)ACCCUGG-AC-AG chl.D.caro 1100 GCGGU--GGA-AAC-U|ACC-AA-G-CUGGAG-UA|CGGUA-----GGGG chl.D.caro 1150 CAGAG|GGAAUUUCCGG-UGGAGCG(GUGAAA)UGCGUAGAGA---UCGG chl.D.caro 1200 AAAGAACACCAAC---GGC(GAAA)GC|A|CUCUG-CUG|GGCCG--A-- chl.D.caro 1250 -------------------------------------------------- chl.D.caro 1300 ----------CAUUGACACU|GAG-AGACGAAAGCUAGGGGAGCGAAUGG chl.D.caro 1350 G(AUU-A-AAUAC)-CCCAUUAG-|UC-CUA-GCCGUAAACGAUGGAU-- chl.D.caro 1400 --AC|UA|GGCG-CUGUGCG------------------(-------anuc chl.D.caro 1450 gacc-)-------------------------------------------- chl.D.caro 1500 |------------------------------|-CGUGCAGUGCU-GUAAC chl.D.caro 1550 (UACC)GCGU-UAAGUAUCC|C|GCCUGGGGAGUACGUUC(GCAA)GAAU chl.D.caro 1600 GAAACUCAAAGGAAUUGACGGGGGCGC-GCACA-------AUCGGU|GGA chl.D.caro 1650 GCAUGUGGUUUAAUUCG-(AUGCAAAG)CGAAGAACCUUACCAUGGCUUG chl.D.caro 1700 ACA----UG|-CC-GCG--AA------UCCUCUU-----(GAA-A-)GAG chl.D.caro 1750 AG-GGG---UG--CC---------(UUCG------)---------GGAA- chl.D.caro 1800 ---------------|CGCGGACA|C|AGGUGGUGAAUG|GCU|GUCGUC chl.D.caro 1850 A|-G-CUCGU|GCC(GUAA)GGUGUUGGG(UUAAGU)CCCGCAACGAGCG chl.D.caro 1900 CAACCCUCG|UGUUUA-G-UUGCCa------------------------- chl.D.caro 1950 -------------------------------------------------- chl.D.caro 2000 -------------------------------------------------- chl.D.caro 2050 -----------------------------(ucguugaguu)--------u chl.D.caro 2100 |GGAACCCUGAACAGACUGCCGGU(GAUAA----)--------------- chl.D.caro 2150 ---------GCCGGAGGAAGGUGAGGAUGACGUC-AA--GUCAUCAUGCC chl.D.caro 2200 CCUUAUGCCCUUGGCGAC-ACUCGUGCUACAAUGGC--CGGGACAAAGGG chl.D.caro 2250 UU----GCGAUCCC--------------------(----GCGA-)----- chl.D.caro 2300 --------------GGGU-GAGCUAACC-CCAA-AAACCCGUCCUCAGUU chl.D.caro 2350 GGGAUUGCAGGC(--UGCAACUC)GCCUGCAUGAAGCCGGAAUCGCU--- chl.D.caro 2400 ---AGUAAU-CGCCGG(UC--AGCCAU)ACGGCGGUGAAUUC--GGU--- chl.D.caro 2450 -----------------ACCGGGCCUUGUACACACCGCCCGUCACACUAU chl.D.caro 2500 GGGAGCUGG-CCAUGCCCGAAGUCGUU---ACNCUUAACC-(-----gca chl.D.caro 2550 a------)-GG-NGG-GGG-AU-GCCG-AAGC-AGNGGCUAGUGACUGGA chl.D.caro 2600 GUGAAGUCGUAACAAGGUAGCCGUACU(GGAA)GGUGCGGCUGGAUCACC chl.D.caro 2650 UCCUUUU-|cagggagagcuannnnnnaugcuuguuggguauuuugguuu chl.D.caro 2700 gauacugcuucacacc| chl.C.amer 0 |~~~~~~~~~~UCUAAUGGAGAG-UU(U-GA)UCCU|GGCUCAGGAUGAA chl.C.amer 50 CGC-UGGCGGCAUGCUU--GACACAUGCAAGUCGGACG|GG--------- chl.C.amer 100 --------aag(ug------------------gugu----)uuu------ chl.C.amer 150 ----------------CU--AGU--GGCGGACGGGUGAGUAA-CGCGUAA chl.C.amer 200 GA-ACCUGC-CCUU------------------------------------ chl.C.amer 250 -------------------------------------------------G chl.C.amer 300 GGA---------GGGGAACAACAG------------------------CU chl.C.amer 350 G(GAAA)CGA-CUGCUAAUACC-UCGU-AG-------------------- chl.C.amer 400 ------------------GCU-------(GAGG---)-------AGC--- chl.C.amer 450 ---AAAA-----------------------GGC-------------(--- chl.C.amer 500 -------GGAA------)---------|----UCCGCCCGAGGA-GGG|G chl.C.amer 550 -CUUGCGU|-CUGAUUA-GCUAGUUGG-UG-AG(G-CAAUAG)-CUUACC chl.C.amer 600 AA|GGCGAUGAU|CAGUAGCUG|GUCC(GAGA)GGAUGAUCAGC|CACAC chl.C.amer 650 UGGGA(CUGAGACACG)GCCCAGA-C--UCC(UA-CG)GG-A--GGCAG- chl.C.amer 700 CAGUGGGG-GAUUUUCCG-CAAU-GGGC-(-GAAA)-GCCU-GACGGA|G chl.C.amer 750 CAAUGCCGCGUGGAGGUAUAAGGCC(---CACG--)GG-UC--GUCAACU chl.C.amer 800 UC|UUUU-ACCUGAUAAGAAAC--------(--------)--------AA chl.C.amer 850 UGACG|GU-AUCU-GGUGAA-UAAGCAUC|GGCU-AACU-CUGUG(CCA- chl.C.amer 900 -GCAGCC|GCGGU---AA-)GACAGAG|GAUGCAAGCGUUAU-CCGGAAU chl.C.amer 950 GAUUGGGC|GUAAAGCGUCUGUAGGUG|GCUUUUUAUG-|UCC-GCCGUC chl.C.amer 1000 AAAUCCCAGGGC(------------------------------------- chl.C.amer 1050 ---------------------------------UUA)ACCCUGG-AC-AG chl.C.amer 1100 GCGGU--GGA-AAC-U|ACC-AA-G-CUGGAG-UA|CGGUA-----GGGG chl.C.amer 1150 CAGAG|GGAAUUCCCGG-UGGAGCG(GUGAAA)UGUUUAGAGA---UCGG chl.C.amer 1200 GAAGAACACCAAC---GGC(GAAA)GC|A|CUCUG-CUG|GGCCG--A-- chl.C.amer 1250 -------------------------------------------------- chl.C.amer 1300 ----------CACUGACACU|GAG-AGACGAAAGCUAGGGGAGCAAAUGG chl.C.amer 1350 G(AUU-A-GAUAC)-CCCAGUAG-|UC-CUA-GCCGUAAACGAUGGAU-- chl.C.amer 1400 --AC|UG|GGCG-CUGUGCG------------------(-------uauc chl.C.amer 1450 gacc-)-------------------------------------------- chl.C.amer 1500 |------------------------------|-CGUGCAGUGCU-GUAGC chl.C.amer 1550 (UAAC)GCGU-UAAGUAUCC|C|GCCUGGGGAGUACGUUU(GCAA)GAAU chl.C.amer 1600 GAAACUCAAAGGAAUUGACGGGGGCCC-GCACA-------AGCGGU|GGA chl.C.amer 1650 GCAUGUGGUUUAAUUCG-(AUGCAAAG)CGAAGAACCUUACCAGGGCUUG chl.C.amer 1700 ACA----UG|-CC-AUG--AA------UCCUCUU-----(GAA-A-)GAG chl.C.amer 1750 AG-GGG---UG--CC---------(UUCG------)---------GGAA- chl.C.amer 1800 ---------------|CGUGGACA|C|AGGUGGUGCAUG|GCU|GUCGUC chl.C.amer 1850 A|-G-CUCGU|GCC(GUAA)GGUGUUGGG(UUAAGU)CCCCUAACGAGCG chl.C.amer 1900 CAACCCUCG|UGUUUA-G-UUGCCc------------------------- chl.C.amer 1950 -------------------------------------------------- chl.C.amer 2000 -------------------------------------------------- chl.C.amer 2050 -----------------------------(-----uauuu)--------u chl.C.amer 2100 |GGAACCCUGAGCAGACUGCCGGU(GAUAA----)--------------- chl.C.amer 2150 ---------GCCAGAGGAAGGUGAGGAUGACGUC-AA--GUCAUCAUGCC chl.C.amer 2200 CCUUAUGCCCUGGGCGAC-ACACGUGCUACAACGGC--CGGGACAAAGGG chl.C.amer 2250 UC----GCGAUCCC--------------------(----GCGA-)----- chl.C.amer 2300 --------------GGGU-GAGCUAACC-CCCA-AAACCCGUCCUCAGUU chl.C.amer 2350 CGGAUUGCAGGC(--UGCAACUC)GCCUGCAUGAAGCCGGAAUCGCU--- chl.C.amer 2400 ---AGUAAU-CGCCGG(UC--AGCCAU)ACGGCGGUGAAUUC--GUU--- chl.C.amer 2450 -----------------CCCGGGCCUUGUACACACCGCCCGUCACGCUAU chl.C.amer 2500 GGGAGCUGG-UCAUGCCCUAAGUCGUU---AUCUU-AACC-(-----aca chl.C.amer 2550 a------)-GG-AGG-GGG-AU-GCCG-AAGG-CAGGGCUAGUGACUGGA chl.C.amer 2600 GUGAAGUCGUAACAAGGUAGCCGUACU(GGAA)GGUGCGGCUGGAUCACC chl.C.amer 2650 UCCUUU--|~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ chl.C.amer 2700 ~~~~~~~~~~~~~~~~| chl.E.virg 0 |~~~~~~~~~~UAUAAUGGAGAG-UU(U-GA)UCCU|GGCUCAGGAUGAA chl.E.virg 50 CGC-UGGCGGCAUGCUU--AACACAUGCAAGUCGGACG|GG--------- chl.E.virg 100 -------aagu(gg------------------u-------)guuu----- chl.E.virg 150 ----------------CC--GGU--GGCGGACGGGUGAGUAA-CGCGUAA chl.E.virg 200 GA-ACCUGC-CCCU------------------------------------ chl.E.virg 250 -------------------------------------------------G chl.E.virg 300 GGA---------GGGGAACAACAG------------------------CC chl.E.virg 350 G(GAAA)CGG-CUGCUAAUACC-UCGU-AA-------------------- chl.E.virg 400 ------------------GCU-------(GAGG---)-------AGC--- chl.E.virg 450 ---UAAA-----------------------GGA-------------(--- chl.E.virg 500 -------GGAA------)---------|----UCCGCCCGAGGA-GGG|G chl.E.virg 550 -CUUGCGU|-CUGAUUA-GCUAGUUGG-UG-GG(G-CAAUAG)-CUUACC chl.E.virg 600 AA|GGCGAUGAU|CAGUAGCUG|GUCC(GAGA)GGAUGAUCAGC|CACAC chl.E.virg 650 UGGGA(CUGAGACACG)GCCCAGA-C--UCC(UA-CG)GG-A--GGCAG- chl.E.virg 700 CAGUGGGG-AAUUUUCCG-CAAU-GGGC-(-GAAA)-G-CU-GACGGA|G chl.E.virg 750 CAAUGCCGCGUGGAGGUAGAAGGCC(---CACG--)GG-UC--GUGAACU chl.E.virg 800 UC|UUUU-ACCGAAGAAGAAGC--------(--------)--------AA chl.E.virg 850 UGACG|GU-AUCU-GGGGAA-UAAGCAUC|GGCU-AACU-CUGUG(CCA- chl.E.virg 900 -GCAGCC|GCGGU---AA-)GACAGAG|GAUGCAAGCGUUAU-CCGGAAU chl.E.virg 950 GAUUGGGC|GUAAAGCGUCUGUAGGUG|GCUUUUUAUG-|UCC-GCCGUC chl.E.virg 1000 AAAUACCAGGGC(------------------------------------- chl.E.virg 1050 ---------------------------------UUA)ACCCCGG-AC-AG chl.E.virg 1100 GCGGU--GGA-AAC-U|AUC-UA-G-CUGGAG-UA|CGGUA-----GGGG chl.E.virg 1150 CAGAG|GGAAUUUCCGG-UGGAGCG(GUGAAA)UGUUUAGAGA---UCGG chl.E.virg 1200 GAAGAACACCAAC---GGC(GAAA)GC|A|CUCUG-CUG|GGCCG--A-- chl.E.virg 1250 -------------------------------------------------- chl.E.virg 1300 ----------CACUGACACU|UAG-AGACGAAAGCUAGGGGAGCGAAUGG chl.E.virg 1350 G(AUU-A-GAUAC)-CCCAGUAG-|UC-CUA-GCCGUAAACGAUGGAU-- chl.E.virg 1400 --AC|UA|GGCG-CUGUGCG------------------(-------uauc chl.E.virg 1450 gacc-)-------------------------------------------- chl.E.virg 1500 |------------------------------|-CGUGCAGUGCU-GUAGC chl.E.virg 1550 (UAAC)GCGU-UAAGUAUCC|C|GCCUGGGGAGUAUGUUC(GCAA)GAAU chl.E.virg 1600 GAAACUCAAAGGAAUUGACGGGGGCCC-GCACA-------AGCGGU|GGA chl.E.virg 1650 GCAUGUGGUUUAAUUCG-(AUGCAAAG)CGAAGAACCUUACCAGGGCUUG chl.E.virg 1700 ACA----UG|-CC-GCG--AA------UCCUCUU-----(GAA-A-)GAG chl.E.virg 1750 AG-GGG---UG--CC---------(UUCG------)---------GGAA- chl.E.virg 1800 ---------------|CGCGGACA|C|AGGUGGUGCAUG|GCU|GUCGUC chl.E.virg 1850 A|-G-CUCGU|GCC(GUAA)GGUGUUGGG(UUAAGU)CCCGUAACGAGCG chl.E.virg 1900 CAACCCUCG|UGUUUA-G-UUGCCc-u----------------------- chl.E.virg 1950 -------------------------------------------------- chl.E.virg 2000 -------------------------------------------------- chl.E.virg 2050 -----------------------------(cguuuaauuu)-------gu chl.E.virg 2100 |GGAACCCUGAACAGACUGCCGGC(GAGAA----)--------------- chl.E.virg 2150 ---------GCCAGAGGAAGGUGAGGAUGACGUC-AA--GUCAUCAUGCC chl.E.virg 2200 CCUUAUGCCCUGGGCGAC-ACACGUGCUACAACGGC--CGGGACAAAGGG chl.E.virg 2250 UC----GCGAUCCC--------------------(----GCGA-)----- chl.E.virg 2300 --------------GGGU-GAGCUAACC-CCAA-AAACCCGUCCUCAGUU chl.E.virg 2350 CGGAUUGCAGAC(--UGCAACUC)GUCUGCAUGAAGCCGGAAUCGCU--- chl.E.virg 2400 ---AGUAAU-CGCCGG(UC--AGCCAU)ACGGCGGUGAAUUA--GUU--- chl.E.virg 2450 -----------------CCCGGGCCUUGUACACACCGCCCGUCACACUAU chl.E.virg 2500 GGAAGCUGG-CCAUGCCCGAAGUCGUU---AUCUU-AACC-(-----aaa chl.E.virg 2550 a------)-GG-AGG-GGG-AU-GCCG-AAGG-CAGGGCUAGUGACUGGA chl.E.virg 2600 GUGAAGUCGUAACAAGGUAGCCGUACU(GGAA)GGUGCAGCUGGAUCACC chl.E.virg 2650 UCCUUU--|~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ chl.E.virg 2700 ~~~~~~~~~~~~~~~~| chl.O.mino 0 |caacuaugaaUCUCAUGGAGAG-UU(C-GA)UCCU|GGCUCAGGAUGAA chl.O.mino 50 CGC-UGGCGACAUGCUU--AACACAUGCAAGUCGGACG|GG--------- chl.O.mino 100 -------aagu(gg------------------u-------)guuu----- chl.O.mino 150 ----------------CC--AGU--GGCGGACGGGUGAGUAA-CGCGUAA chl.O.mino 200 GA-ACCUGC-CCUU------------------------------------ chl.O.mino 250 -------------------------------------------------G chl.O.mino 300 GGA---------GGGGAACAACAA------------------------CU chl.O.mino 350 G(GAAA)CGG-CUGCUAAUACC-CCGU-AG-------------------- chl.O.mino 400 ------------------GCU-------(GAGG---)-------AGC--- chl.O.mino 450 ---AAAA-----------------------GGA-------------(--- chl.O.mino 500 -------GGAA------)---------|----UCCGCCUGAGGA-GGG|G chl.O.mino 550 -CUUGCGU|-CUGAUUA-GCUAGUUGG-UG-AG(G-CAAUAG)-CUUACC chl.O.mino 600 AA|GGCGAUGAU|CAGUAGCUG|GUCC(GAGA)GGAUGAUCAGC|CACAC chl.O.mino 650 UGGGA(CUGAGACACG)GCCCAGA-C--UCC(UA-CG)GG-A--GGCAG- chl.O.mino 700 CAGUGGGG-AAUUUUCCG-CAAU-GGGC-(-GAAA)-GC-U-GACGGA|G chl.O.mino 750 CAAUGCCGCGUGGAGGUAGAAGGCC(---CACG--)GG-UC--GUGAACU chl.O.mino 800 UC|UUUU-CCCGGAGAAGAAGC--------(--------)--------AA chl.O.mino 850 UGACG|GU-AUCU-GGGGAA-UAAGCAUC|GGCU-AACU-CUGUG(CCA- chl.O.mino 900 -GCAGCC|GCGGU---AA-)GACAGAG|GAUGCAAGCGUUAU-CCGGAAU chl.O.mino 950 GAUUGGGC|GUAAAGCGUCUGUAGGUG|GCUUUUUAAG-|UCC-GCCGUC chl.O.mino 1000 AAAUCCCAGGGC(------------------------------------- chl.O.mino 1050 ---------------------------------UCA)ACCCUGG-AC-AG chl.O.mino 1100 GCGGU--GGA-AAC-U|ACC-AA-G-CUGGAG-UA|CGGUA-----GGGG chl.O.mino 1150 CAGAG|GGAAUUUCCGG-UGGAGCG(GUUAAA)UGCGUUGAGA---UCGG chl.O.mino 1200 AAAGAACACCAAC---GGC(GAAA)GC|A|CUCUG-CUG|GGCCG--A-- chl.O.mino 1250 -------------------------------------------------- chl.O.mino 1300 ----------CACUGACACU|AAG-AGACGAAAGCUAGGGGAGCGAAUGG chl.O.mino 1350 G(AUU-A-GGGAC)-CCCGAUAG-|UC-CUA-GCCGUAAACGAUGGAU-- chl.O.mino 1400 --AC|UA|GGCG-CUGUGCG------------------(-------uauc chl.O.mino 1450 gacc-)-------------------------------------------- chl.O.mino 1500 |------------------------------|-CGUGCAGUGCU-GUAGC chl.O.mino 1550 (UAAC)GCGU-UAAGUAUCC|C|GCCUGGGGAGUACGUUC(GCAA)GAAU chl.O.mino 1600 GAAACUCAAAGGAAUUGACGUGGGCCC-GCACA-------AGCGGU|GGA chl.O.mino 1650 GCAUGUGGUUUAAUUCG-(AUGCAGAG)CGAAGAACCUUACCAGGGCUUG chl.O.mino 1700 ACA----UG|-CC-GCG--AA------UCCUCUU-----(GAA-A-)GAG chl.O.mino 1750 AG-GGG---UG--CC---------(UUCG------)---------GGAA- chl.O.mino 1800 ---------------|CGCGGACA|C|AGGUGGUGCAUG|GCU|GUCGUC chl.O.mino 1850 A|-G-CUCGU|GCC(GUCA)GGUGUUGGG(UUAAGU)CCCGCAACGAGCG chl.O.mino 1900 CAACCCUCG|UGUUUA-G-UUGCCa------------------------- chl.O.mino 1950 -------------------------------------------------- chl.O.mino 2000 -------------------------------------------------- chl.O.mino 2050 -----------------------------(--uc---guu)--------u chl.O.mino 2100 |GGAACCCUGAACAGACUGCUGGU(GAUAA----)--------------- chl.O.mino 2150 ---------GCCGGAGGAAGGUGAGGAUGACGUC-AA--GUCAUCAUGCC chl.O.mino 2200 CCUUAUGCCCUGGGCGACCCUACGUGCUACAAUGGC--CGGGACAAAGGG chl.O.mino 2250 UC----GCGAUCCC--------------------(----GCGA-)a---- chl.O.mino 2300 --------------GGGU-GAGCUAACC-CCAA-AAACCCGUCCUCAGUU chl.O.mino 2350 CGGAUUGCAGGC(--UGCAACUC)GCCUGCAUGAAGCAGGAAUCGCU--- chl.O.mino 2400 ---AGUAAU-CGCCGG(UC--AGCCAU)ACGGCGGUGAAUUC--GUU--- chl.O.mino 2450 -----------------CCCGGGCCUUGUACACACCGCCCGUCACACUAU chl.O.mino 2500 GGGAGCUGG-UCAUGCCCCAAGUCGUU---A-CCUUAACC-(-----gca chl.O.mino 2550 a------)-GG-AGG-GGG-AU-GCCG-AAGG-CAGGGCUAGUGACUGGA chl.O.mino 2600 GUGAAGUCGUAACAAGGUAGCCGUACU(GGAA)GGUGCGGCUGGAUCACC chl.O.mino 2650 UCCUUU--|~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ chl.O.mino 2700 ~~~~~~~~~~~~~~~~| chl.C.refl 0 |~~~~~~~~~~UCUCAUGGAGAG-UU(C-GA)UCCU|GGCUCAGGAUGAA chl.C.refl 50 CGC-UGGCGGCAUGCUU--AACACAUGCAAGUCGUACG|GG--------- chl.C.refl 100 -------aagu(gg------------------u-------)guuu----- chl.C.refl 150 ----------------CC--AGU--GGCGGACGGGUGAGUAG-CGCGUAA chl.C.refl 200 GA-ACCUGC-CCUU------------------------------------ chl.C.refl 250 -------------------------------------------------G chl.C.refl 300 GGA---------GGGGAACAACAG------------------------CU chl.C.refl 350 G(GAAA)CGG-CUGCUAAUACC-CCGU-A--------------------- chl.C.refl 400 ------------------GCU-------(GAGG---)-------AGC--- chl.C.refl 450 ---AAAA-----------------------GGA-------------(--- chl.C.refl 500 -------GGAA------)---------|----UCCGCCCGAGGA-GGG|G chl.C.refl 550 -CUCGCGU|-CUGAUUA-GCUAGUUGG-UG-AG(G-CAAUAG)-CUUACC chl.C.refl 600 AA|GGCAAUGAU|CAGUAGCUG|GUCC(GAGA)GGAUGAUCAGC|CACAC chl.C.refl 650 UGGGA(CUGAGACACG)GCCCAGA-C--UCC(UA-CG)GG-A--GGCAG- chl.C.refl 700 CAGUGGGG-AAUUUUCCG-CAAU-GGGC-(-GAAA)-G-CU-GACGGA|G chl.C.refl 750 CAAUGCCGCGUGGAGGUAGAAGGCC(---CACG--)GG-UC--GUGAACU chl.C.refl 800 UC|UUUU-CCCGGAGAAGAAGC--------(--------)--------AA chl.C.refl 850 UGACG|GU-AUCU-GGGGAA-UAAGCAUC|GGCU-AACU-CUGUG(CCA- chl.C.refl 900 -GCAGCC|GCGGU---AA-)UACAGAG|GAUGCAAGCGUUAU-CCGGAAU chl.C.refl 950 GAUUGGGC|GUAAAGCGUCUGUAGGUG|GCUUUUUAAG-|UCC-GCCGUC chl.C.refl 1000 AAAUCCCAGGGC(------------------------------------- chl.C.refl 1050 ---------------------------------UCA)ACCCUGG-AC-AG chl.C.refl 1100 GCGGU--GGA-AAC-U|ACC-AA-G-CUGGAG-UA|CGGUA-----GGGG chl.C.refl 1150 CAGAG|GGAAUUUCCGG-UGGAGCG(GUGAAA)UGCGUAGAGA---UCGG chl.C.refl 1200 AAAGAACACCAAC---GGC(GAAA)GC|A|CUCUG-CUG|GGCCG--A-- chl.C.refl 1250 -------------------------------------------------- chl.C.refl 1300 ----------CACUGACACU|GAG-AGACGAAAGCUAGGGGAGCGAAUGG chl.C.refl 1350 G(AUU-A-GAUAC)-CCCAGUAG-|UC-CUA-GCCGUAAACGAUGGAU-- chl.C.refl 1400 --AC|UA|GGCG-CUGUGCG------------------(-------uauc chl.C.refl 1450 gacc-)-------------------------------------------- chl.C.refl 1500 |------------------------------|-CGUGCAGUGCU-GUAGC chl.C.refl 1550 (UAAC)GCGU-UAAGUAUCC|C|GCCUGGGGAGUACGUUC(GCAC)GAAU chl.C.refl 1600 GAAACUCAAAGGAAUUGACGGGGGCCC-GCACA-------AGCGGU|GGA chl.C.refl 1650 GCAUGUGGUUUAAUUCG-(AUGCAAAG)CGAAGAACCUUACCAGGGCUUG chl.C.refl 1700 ACA----UG|-CC-GCG--AA------UCCUCUU-----(GAA-A-)GAG chl.C.refl 1750 AG-GGG---UG--CC---------(UUCG------)---------GGAA- chl.C.refl 1800 ---------------|CGUGGACA|C|AGGUGGUGCAUG|GCU|GUCGUC chl.C.refl 1850 A|-G-CUCGU|GCC(GUAA)GGUGUUGGG(UUAAGU)CCCGCAACGAGCG chl.C.refl 1900 CAACCCUCG|UGUUUA-G-UUGCCa------------------------- chl.C.refl 1950 -------------------------------------------------- chl.C.refl 2000 -------------------------------------------------- chl.C.refl 2050 -----------------------------(ucguugaguu)--------u chl.C.refl 2100 |GGAACCCUGAACAGACUGCCGGU(GAUAA----)--------------- chl.C.refl 2150 ---------GCCGGAGGAAGGUGAGGAUGACGUC-AA--GUCAUCAUGCC chl.C.refl 2200 CCUUAUGCCCUGGGCGAC-ACACGUGCUACAAUGGC--CGGGACAAAGGG chl.C.refl 2250 UC----GCGAUCCC--------------------(----GCGA-)----- chl.C.refl 2300 --------------GGGU-GAGCUAACC-CCAA-AAACCCGUCCUCAGUU chl.C.refl 2350 CGGAUUGCAGGC(--UGCAACUC)GCCUGCAUGAAGCCGGAAUCGCU--- chl.C.refl 2400 ---AGUAAU-CGCCGG(UC--AGCCAU)ACGGCGGUGAAUUC--GUU--- chl.C.refl 2450 -----------------CCCGGGCCUUGUACACACCGCCCGUCACACUAU chl.C.refl 2500 GGGAGCUGG-CCAUGCCCGAAGUCGUU---ACCUU-AACC-(-----gca chl.C.refl 2550 a------)-GG-AGG-GGG-AU-GCCG-AAGG-UAGGGCUAGUGACUGGA chl.C.refl 2600 GUGAAGUCGUAACAAGGUAGCCGUACU(GGAA)GGUGCGGCUGGAUCACC chl.C.refl 2650 UCCUUU--|~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ chl.C.refl 2700 ~~~~~~~~~~~~~~~~| chl.N.pl.1 0 |~~~~~~~~~~UCUCAUGGAGAG-UU(C-GA)UCCU|GGCUCAGGAUGAA chl.N.pl.1 50 CGC-UGGCGGCAUGCUU--AACACAUGCAAGUCGGACG|GG--------- chl.N.pl.1 100 -------aagu(gg------------------u-------)guuu----- chl.N.pl.1 150 ----------------CC--AGU--GGCGGACGGGUGAGUAA-CGCGUAA chl.N.pl.1 200 GA-ACCUGC-CCUU------------------------------------ chl.N.pl.1 250 -------------------------------------------------G chl.N.pl.1 300 GGA---------GGGGAACAACAG------------------------CU chl.N.pl.1 350 G(GAAA)CGG-CUGCUAAUACC-CCGU-AG-------------------- chl.N.pl.1 400 ------------------GCU-------(GAGG---)-------AGC--- chl.N.pl.1 450 ---AAAA-----------------------GGA-------------(--- chl.N.pl.1 500 -------GGAA------)---------|----UCCGCCCGAGGA-GGG|G chl.N.pl.1 550 -CUCGCGU|-CUGAUUA-GCUAGUUGG-UG-AG(G-CAAUAG)-CUUACC chl.N.pl.1 600 AA|GGCGAUGAU|CAGUAGCUG|GUCC(GAGA)GGAUGAUCAGC|CACAC chl.N.pl.1 650 UGGGA(CUGAGACACG)GCCCAGA-C--UCC(UA-CG)GG-A--GGCAG- chl.N.pl.1 700 CAGUGGGG-AAUUUUCCG-CAAU-GGGC-(-GAAA)-GCCU-GACGGA|G chl.N.pl.1 750 CAAUGCCGCGUGGAGGUAGAAGGCC(---CACG--)GG-UC--GUGAACU chl.N.pl.1 800 UC|UUUU-CCCGGAGAAGAAGC--------(--------)--------AA chl.N.pl.1 850 UGACG|GU-AUCU-GGGGAA-UAAGCAUC|GGCU-AACU-CUGUG(CCA- chl.N.pl.1 900 -GCAGCC|GCGGU---AA-)UACAGAG|GAUGCAAGCGUUAU-CCGGAAU chl.N.pl.1 950 GAUUGGGC|GUAAAGCGUCUGUAGGUG|GCUUUUUAAG-|UCC-GCCGUC chl.N.pl.1 1000 AAAUCCCAGGGC(------------------------------------- chl.N.pl.1 1050 ---------------------------------UCA)ACCCUGG-AC-AG chl.N.pl.1 1100 GCGGU--GGA-AAC-U|ACC-AA-G-CUGGAG-UA|CGGUA-----GGGG chl.N.pl.1 1150 CAGAG|GGAAUUUCCGG-UGGAGCG(GUGAAA)UGCGUAGAGA---UCGG chl.N.pl.1 1200 AAAGAACACCAAC---GGC(GAAA)GC|A|CUCUG-CUG|GGCCG--A-- chl.N.pl.1 1250 -------------------------------------------------- chl.N.pl.1 1300 ----------CACUGACACU|GAG-AGACGAAAGCUAGGGGAGCGAAUGG chl.N.pl.1 1350 G(AUU-A-GAUAC)-CCCAGUAG-|UC-CUA-GCCGUAAACGAUGGAU-- chl.N.pl.1 1400 --AC|UA|GGCG-CUGUGCG------------------(-------uauc chl.N.pl.1 1450 gacc-)-------------------------------------------- chl.N.pl.1 1500 |------------------------------|-CGUGCAGUGCU-GUAGC chl.N.pl.1 1550 (UAAC)GCGU-UAAGUAUCC|C|GCCUGGGGAGUACGUUC(GCAA)GAAU chl.N.pl.1 1600 GAAACUCAAAGGAAUUGACGGGGGCCC-GCACA-------AGCGGU|GGA chl.N.pl.1 1650 GCAUGUGGUUUAAUUCG-(AUGCAAAG)CGAAGAACCUUACCAGGGCUUG chl.N.pl.1 1700 ACA----UG|-CC-GCG--AA------UCCUCUU-----(GAA-A-)GAG chl.N.pl.1 1750 AG-GGG---UG--CC---------(UUCG------)---------GGAA- chl.N.pl.1 1800 ---------------|CGCGGACA|C|AGGUGGUGCAUG|GCU|GUCGUC chl.N.pl.1 1850 A|-G-CUCGU|GCC(GUAA)GGUGUUGGG(UUAAGU)CCCGCAACGAGCG chl.N.pl.1 1900 CAACCCUCG|UGUUUA-G-UUGCCa------------------------- chl.N.pl.1 1950 -------------------------------------------------- chl.N.pl.1 2000 -------------------------------------------------- chl.N.pl.1 2050 -----------------------------(ucguugaguu)--------u chl.N.pl.1 2100 |GGAACCCUGAACAGACUGCCGGU(GAUAA----)--------------- chl.N.pl.1 2150 ---------GCCGGAGGAAGGUGAGGAUGACGUC-AA--GUCAUCAUGCC chl.N.pl.1 2200 CCUUAUGCCCUGGGCGAC-ACACGUGCUACAAUGGC--CGGGACAAAGGG chl.N.pl.1 2250 UC----GCGAUCCC--------------------(----GCGA-)----- chl.N.pl.1 2300 ---------------GGU-GAGCUAACC-CCAA-AAACCCGUCCUCAGUU chl.N.pl.1 2350 CGGAUUGCAGGC(--UGCAACUC)GCCUGCAUGAAGCCGGAAUCGCU--- chl.N.pl.1 2400 ---AGUAAU-CGCCGG(UC--AGCCAU)ACGGCGGUGAAUUC--GUU--- chl.N.pl.1 2450 -----------------CCCGGGCCUUGUACACACCGCCCGUCACACUAU chl.N.pl.1 2500 GGGAGCUGG-CCAUGCCCGAAGUCGUU---ACCUU-AACC-(-----gca chl.N.pl.1 2550 a------)-GG-AGG-GGG-AU-GCCG-AAGG-CAGGGCUAGUGACUGGA chl.N.pl.1 2600 GUGAAGUCGUAACAAGGUAGCCGUACU(GGAA)GGUGCGGCUGGAUCACC chl.N.pl.1 2650 UCCUUU--|~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ chl.N.pl.1 2700 ~~~~~~~~~~~~~~~~| chl.N.pl.2 0 |~~~~~~~~~~UCUCAUGGAGAG-UU(C-GA)UCCU|GGCUCAGGAUGAA chl.N.pl.2 50 CGC-UGGCGGCAUGCUU--AACACAUGCAAGUCGGACG|GG--------- chl.N.pl.2 100 -------aagu(gg------------------u-------)guuu----- chl.N.pl.2 150 ----------------CC--AGU--GGCGGACGGGUGAGUAA-CGCGUAA chl.N.pl.2 200 GA-ACCUGC-CCUU------------------------------------ chl.N.pl.2 250 -------------------------------------------------G chl.N.pl.2 300 GGA---------GGGGAACAACAG------------------------CU chl.N.pl.2 350 G(GAAA)CGG-CUGCUAAUACC-CCGU-AG-------------------- chl.N.pl.2 400 ------------------GCU-------(GAGG---)-------AGC--- chl.N.pl.2 450 ---AAAA-----------------------GGA-------------(--- chl.N.pl.2 500 -------GGAA------)---------|----UCCGCCCGAGGA-GGG|G chl.N.pl.2 550 -CUCGCGU|-CUGAUUA-GCUAGUUGG-UG-AG(G-CAAUAG)-CUUACC chl.N.pl.2 600 AA|GGCGAUGAU|CAGUAGCUG|GUCC(GAGA)GGAUGAUCAGC|CACAC chl.N.pl.2 650 UGGGA(CUGAGACACG)GCCCAGA-C--UCC(UA-CG)GG-A--GGCAG- chl.N.pl.2 700 CAGUGGGG-AAUUUUCCG-CAAU-GGGC-(-GAAA)-G-CU-GACGGA|G chl.N.pl.2 750 CAAUGCCGCGUGGAGGUAGAAGGCC(---CACG--)GG-UC--GUGAACU chl.N.pl.2 800 UC|UUUU-CCCGGAGAAGAAGC--------(--------)--------AA chl.N.pl.2 850 UGACG|GU-AUCU-GGGGAA-UAAGCAUC|GGCU-AACU-CUGUG(CCA- chl.N.pl.2 900 -GCAGCC|GCGGU---AA-)UACAGAG|GAUGCAAGCGUUAU-CCGGAAU chl.N.pl.2 950 GAUUGGGC|GUAAAGCGUCUGUAGGUG|GCUUUUUAAG-|UCC-GCCGUC chl.N.pl.2 1000 AAAUCCCAGGGC(------------------------------------- chl.N.pl.2 1050 ---------------------------------UCA)ACCCUGG-AC-AG chl.N.pl.2 1100 GCGGU--GGA-AAC-U|ACC-AA-G-CUGGAG-UA|CGGUA-----GGGG chl.N.pl.2 1150 CAGAG|GGAAUUUCCGG-UGGAGCG(GUGAAA)UGCGUAGAGA---UCGG chl.N.pl.2 1200 AAAGAACACCAAC---GGC(GAAA)GC|A|CUCUG-CUG|GGCCG--A-- chl.N.pl.2 1250 -------------------------------------------------- chl.N.pl.2 1300 ----------CACUGACACU|GAG-AGACGAAAGCUAGGGGAGCGAAUGG chl.N.pl.2 1350 G(AUU-A-GAUAC)-CCCAGUAG-|UC-CUA-GCCGUAAACGAUGGAU-- chl.N.pl.2 1400 --AC|UA|GGCG-CUGUGCG------------------(-------uauc chl.N.pl.2 1450 gacc-)-------------------------------------------- chl.N.pl.2 1500 |------------------------------|-CGUGCAGUGCU-GUAGC chl.N.pl.2 1550 (UAAC)GCGU-UAAGUAUCC|C|GCCUGGGGAGUACGUUC(GCAA)GAAU chl.N.pl.2 1600 GAAACUCAAAGGAAUUGACGGGGGCCC-GCACA-------AGCG-U|GGA chl.N.pl.2 1650 GCAUGUGGUUUAAUUCG-(AUGCAAAG)CGAAGAACCUUACCAGGGCUUG chl.N.pl.2 1700 ACA----UG|-CC-GCG--AA------UCCUCUU-----(GAA-A-)GAG chl.N.pl.2 1750 AG-GGG---UG--CC---------(UUCG------)---------GGAA- chl.N.pl.2 1800 ---------------|CGCGGACA|C|AGGUGGUGCAUG|GCU|GUCGUC chl.N.pl.2 1850 A|-G-CUCGU|GCC(GUAA)GGUGUUGGG(UUAAGU)CCCGCAACGAGCG chl.N.pl.2 1900 CAACCCUCG|UGUUUA-G-UUGCCa------------------------- chl.N.pl.2 1950 -------------------------------------------------- chl.N.pl.2 2000 -------------------------------------------------- chl.N.pl.2 2050 -----------------------------(ucguugaguu)--------u chl.N.pl.2 2100 |GGAACCCUGAACAGACUGCCGGU(GAUAA----)--------------- chl.N.pl.2 2150 ---------GCCGGAGGAAGGUGAGGAUGACGUC-AA--GUCAUCAUGCC chl.N.pl.2 2200 CCUUAUGCCCUGGGCGAC-ACACGUGCUACAAUGGC--CGGGACAAAGGG chl.N.pl.2 2250 UC----GCGAUCCC--------------------(----GCGA-)----- chl.N.pl.2 2300 ---------------GGU-GAGCUAACC-CCAA-AAACCCGUCCUCAGUU chl.N.pl.2 2350 CGGAUUGCAGGC(--UGCAACUC)GCCUGCAUGAAGCCGGAAUCGCU--- chl.N.pl.2 2400 ---AGUAAU-CGCCGG(UC--AGCCAU)ACGGCGGUGAAUUC--GUU--- chl.N.pl.2 2450 -----------------CCCGGGCCUUGUACACACCGCCCGUCACACUAU chl.N.pl.2 2500 GGGAGCUGG-CCAUGCCCGAAGUCGUU---ACCUU-AACC-(-----gca chl.N.pl.2 2550 a------)-GG-AGG-GGG-AU-GCCG-AAGG-CAGGGCUAGUGACUGGA chl.N.pl.2 2600 GUGAAGUCGUAACAAGGUAGCCGUACU(GGAA)GGUGCGGCUGGAUCACC chl.N.pl.2 2650 UCCUUU--|~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ chl.N.pl.2 2700 ~~~~~~~~~~~~~~~~| chl.N.ta.1 0 |~~~~~~~~~~UCUCAUGGAGAG-UU(C-GA)UCCU|GGCUCAGGAUGAA chl.N.ta.1 50 CGC-UGGCGGCAUGCUU--AACACAUGCAAGUCGGACG|GG--------- chl.N.ta.1 100 -------aagu(gg------------------u-------)guuu----- chl.N.ta.1 150 ----------------CC--AGU--GGCGGACGGGUGAGUAA-CGCGUAA chl.N.ta.1 200 GA-ACCUGC-CCUU------------------------------------ chl.N.ta.1 250 -------------------------------------------------G chl.N.ta.1 300 GGA---------GGGGAACAACAG------------------------CU chl.N.ta.1 350 G(GAAA)CGG-CUGCUAAUACC-CCGU-AG-------------------- chl.N.ta.1 400 ------------------GCU-------(GAGG---)-------AGC--- chl.N.ta.1 450 ---AAAA-----------------------GGA-------------(--- chl.N.ta.1 500 -------GGAA------)---------|----UCCGCCCGAGGA-GGG|G chl.N.ta.1 550 -CUCGCGU|-CUGAUUA-GCUAGUUGG-UG-AG(G-CAAUAG)-CUUACC chl.N.ta.1 600 AA|GGCGAUGAU|CAGUAGCUG|GUCC(GAGA)GGAUGAUCAGC|CACAC chl.N.ta.1 650 UGGGA(CUGAGACACG)GCCCAGA-C--UCC(UA-CG)GG-A--GGCAG- chl.N.ta.1 700 CAGUGGGG-AAUUUUCCG-CAAU-GGGC-(-GAAA)-GC---GACGGA|G chl.N.ta.1 750 CAAUGCCGCGUGGAGGUAGAAGGCC(---CACG--)GG-UC--GUGAACU chl.N.ta.1 800 UC|UUUU-CCCGGAGAAGAAGC--------(--------)--------AA chl.N.ta.1 850 UGACG|GU-AUCU-GGGGAA-UAAGCAUC|GGCU-AACU-CUGUG(CCA- chl.N.ta.1 900 -GCAGCC|GCGGU---AA-)UACAGAG|GAUGCAAGCGUUAU-CCGGAAU chl.N.ta.1 950 GAUUGGGC|GUAAAGCGUCUGUAGGUG|GCUUUUUAAG-|UCC-GCCGUC chl.N.ta.1 1000 AAAUCCCAGGGC(------------------------------------- chl.N.ta.1 1050 ---------------------------------UCA)ACCCUGG-AC-AG chl.N.ta.1 1100 GCGGU--GGA-AAC-U|ACC-AA-G-CUGGAG-UA|CGGUA-----GGGG chl.N.ta.1 1150 CAGAG|GGAAUUUCCGG-UGGAGCG(GUGAAA)UGCGUAGAGA---UCGG chl.N.ta.1 1200 AAAGAACACCAAC---GGC(GAAA)GC|A|CUCUG-CUG|GGCCG--A-- chl.N.ta.1 1250 -------------------------------------------------- chl.N.ta.1 1300 ----------CACUGACACU|GAG-AGACGAAAGCUAGGGGAGCGAAUGG chl.N.ta.1 1350 G(AUU-A-GAUAC)-CCCAGUAG-|UC-CUA-GCCGUAAACGAUGGAU-- chl.N.ta.1 1400 --AC|UA|GGCG-CUGUGCG------------------(--------auc chl.N.ta.1 1450 gacc-)-------------------------------------------- chl.N.ta.1 1500 |------------------------------|-CGUGCAGUGCU-GUAGC chl.N.ta.1 1550 (UAAC)GCGU-UAAGUAUCC|C|GCCUGGGGAGUACGUUC(GCAA)GAAU chl.N.ta.1 1600 GAAACUCAAAGGAAUUGACGGGGGCGC-GCACA-------AGCGGU|GGA chl.N.ta.1 1650 GCAUGUGGUUUAAUUCG-(AUGCAAAG)CGAAGAACCUUACCAUGGCUUG chl.N.ta.1 1700 ACA----UG|-CC-GCG--AA------UCCUCUU-----(GAA-A-)GAG chl.N.ta.1 1750 AG-GGG---UG--CC---------(UUCG------)---------GGAA- chl.N.ta.1 1800 ---------------|CGCGGACA|C|AGGUGGUGCAUG|GCU|GUCGUC chl.N.ta.1 1850 A|-G-CUCGU|GCC(GUAA)GGUGUUGGG(UUAAGU)CCCGCAACGAGCG chl.N.ta.1 1900 CAACCCUCG|UGUUUA-G-UUGCCa------------------------- chl.N.ta.1 1950 -------------------------------------------------- chl.N.ta.1 2000 -------------------------------------------------- chl.N.ta.1 2050 -----------------------------(ucguugaguu)--------u chl.N.ta.1 2100 |GGAACCCUGAACAGACUGCCGGU(GUUAA----)--------------- chl.N.ta.1 2150 ---------GCCGGAGGAAGGUGAGGAUGACGUC-AA--GUCAUCAUGCC chl.N.ta.1 2200 CCUUAUGCCCUUGGCGAC-ACACGUGCUACAAUGGC--CGGGACAAAGGG chl.N.ta.1 2250 UC----GCGAUCCC--------------------(----GCGA-)----- chl.N.ta.1 2300 --------------GGGU-GAGCUAACC-CCAA-AAACCCGUCCUCAGUU chl.N.ta.1 2350 CGGAUUGCAGGC(--UGCAACUC)GCCUGCAUGAAGCCGGAAUCGCU--- chl.N.ta.1 2400 ---AGUAAU-CGCCGG(UC--AGCCAU)ACGGCGGUGAAUUC--GUU--- chl.N.ta.1 2450 -----------------CCCGGGCCUUGUACACACCGCCCGUCACACUAU chl.N.ta.1 2500 GGGAGCUGG-CCAUGCCCGAAGUCGUU---ACCUU-AACC-(-----gca chl.N.ta.1 2550 a------)-GG--GG-GGG-AU-GCCG-AA-G-CGGGGCUAGUGACUGGA chl.N.ta.1 2600 GUGAAGUCGUAACAAGGUAGCCGUACU(GGAA)GGUGCGGCUGGAUCACC chl.N.ta.1 2650 UCCUUU--|~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ chl.N.ta.1 2700 ~~~~~~~~~~~~~~~~| chl.N.ta.2 0 |----------UCUCAUGGAGAG-UU(C-GA)UCCU|GGCUCAGGAUGAA chl.N.ta.2 50 CGC-UGGCGGCAUGCUU--AACACAUGCAAGUCGGACG|GG--------- chl.N.ta.2 100 -------aagu(gg------------------u-------)guuu----- chl.N.ta.2 150 ----------------CC--AGU--GGCGGACGGGUGAGUAA-CGCGUAA chl.N.ta.2 200 GA-ACCUGC-CCUU------------------------------------ chl.N.ta.2 250 -------------------------------------------------G chl.N.ta.2 300 GGA---------GGGGAACAACAG------------------------CU chl.N.ta.2 350 G(GAAA)CGG-CUGCUAAUACC-CCGU-AG-------------------- chl.N.ta.2 400 ------------------GCU-------(GAGG---)-------AGC--- chl.N.ta.2 450 ---AAAA-----------------------GGA-------------(--- chl.N.ta.2 500 -------GGAA------)---------|----UCCGCCCGAGGA-GGG|G chl.N.ta.2 550 -CUCGCGU|-CUGAUUA-GCUAGUUGG-UG-AG(G-CAAUAG)-CUUACC chl.N.ta.2 600 AA|GGCGAUGAU|CAGUAGCUG|GUCC(GAGA)GGAUGAUCAGC|CACAC chl.N.ta.2 650 UGGGA(CUGAGACACG)GCCCAGA-C--UCC(UA-CG)GG-A--GGCAG- chl.N.ta.2 700 CAGUGGGG-AAUUUUCCG-CAAU-GGGC-(-GAAA)-GCU--GACGGA|G chl.N.ta.2 750 CAAUGCCGCGUGGAGGUAGAAGGCC(---CACG--)GG-UC--GUGAACU chl.N.ta.2 800 UC|UUUU-CCCGGAGAAGAAGC--------(--------)--------AA chl.N.ta.2 850 UGACG|GU-AUCU-GGGGAA-UAAGCAUC|GGCU-AACU-CUGUG(CCA- chl.N.ta.2 900 -GCAGCC|GCGGU---AA-)UACAGAG|GAUGCAAGCGUUAU-CCGGAAU chl.N.ta.2 950 GAUUGGGC|GUAAAGCGUCUGUAGGUG|GCUUUUUAAG-|UCC-GCCGUC chl.N.ta.2 1000 AAAUCCCAGGGC(------------------------------------- chl.N.ta.2 1050 ---------------------------------UCA)ACCCUGG-AC-AG chl.N.ta.2 1100 GCGGU--GGA-AAC-U|ACC-AA-G-CUGGAG-UA|CGGUA-----GGGG chl.N.ta.2 1150 CAGAG|GGAAUUUCCGG-UGGAGCG(GUGAAA)UGCGUAGAGA---UCGG chl.N.ta.2 1200 AAAGAACACCAAC---GGC(GAAA)GC|A|CUCUG-CUG|GGCCG--A-- chl.N.ta.2 1250 -------------------------------------------------- chl.N.ta.2 1300 ----------CACUGACACU|GAG-AGACGAAAGCUAGGGGAGCGAAUGG chl.N.ta.2 1350 G(AUU-A-GAUAC)-CCCAGUAG-|UC-CUA-GCCGUAAACGAUGGAU-- chl.N.ta.2 1400 --AC|UA|GGCG-CUGUGCG------------------(-------uauc chl.N.ta.2 1450 gacc-)-------------------------------------------- chl.N.ta.2 1500 |------------------------------|-CGUGCAGUGCU-GUAGC chl.N.ta.2 1550 (UAAC)GCGU-UAAGUAUCC|C|GCCUGGGGAGUACGUUC(GCAA)GAAU chl.N.ta.2 1600 GAAACUCAAAGGAAUUGACGGGGGCCC-GCACA-------AGCGGU|GGA chl.N.ta.2 1650 GCAUGUGGUUUAAUUCG-(AUGCAAAG)CGAAGAACCUUACCAGGGCUUG chl.N.ta.2 1700 ACA----UG|-CC-GCG--AA------UCCUCUU-----(GAA-A-)GAG chl.N.ta.2 1750 AG-GGG---UG--CC---------(UUCG------)---------GGAA- chl.N.ta.2 1800 ---------------|CGCGGACA|C|AGGUGGUGCAUG|GCU|GUCGUC chl.N.ta.2 1850 A|-G-CUCGU|GCC(GUAA)GGUGUUGGG(UUAAGU)CCCGCAACGAGCG chl.N.ta.2 1900 CAACCCUCG|UGUUUA-G-UUGCCa------------------------- chl.N.ta.2 1950 -------------------------------------------------- chl.N.ta.2 2000 -------------------------------------------------- chl.N.ta.2 2050 -----------------------------(ucguugaguu)--------u chl.N.ta.2 2100 |GGAACCCUGAACAGACUGCCGGU(GAUAA----)--------------- chl.N.ta.2 2150 ---------GCCGGAGGAAGGUGAGGAUGACGUC-AA--GUCAUCAUGCC chl.N.ta.2 2200 CCUUAUGCCCUGGGCGAC-ACACGUGCUACAAUGGC--CGGGACAAAGGG chl.N.ta.2 2250 UC----GCGAUCCC--------------------(----GCGA-)----- chl.N.ta.2 2300 --------------GG-u-GAGCUAACC-CCAA-AAACCCGUCCUCAGUU chl.N.ta.2 2350 CGGAUUGCAGGC(--UGCAACUC)GCCUGCAUGAAGCCGGAAUCGCU--- chl.N.ta.2 2400 ---AGUAAU-CGCCGG(UC--AGCCAU)ACGGCGGUGAAUUC--GUU--- chl.N.ta.2 2450 -----------------CCCGGGCCUUGUACACACCGCCCGUCACACUAU chl.N.ta.2 2500 GGGAGCUGG-CCAUGCCCGAAGUCGUU---ACCUU-AACC-(-----gca chl.N.ta.2 2550 a------)-GG-AGG-GGG-AU-GCCG-AAGG-CAGGGCUAGUGACUGGA chl.N.ta.2 2600 GUGAAGUCGUAACAAGGUAGCCGUACU(GGAA)GGUGCGGCUGGAUCACC chl.N.ta.2 2650 UCCUUU--|~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ chl.N.ta.2 2700 ~~~~~~~~~~~~~~~~| chl.G.max 0 |~~~~~~~~~~UCUCAUGGAGAG-UU(C-GA)UCCU|GGCUCAGGAUGAA chl.G.max 50 CGC-UGGCGGCAUGCCU--UACACAUGCAAGUCGGACG|GG--------- chl.G.max 100 -------aagu(gg------------------u-------)Guuu----- chl.G.max 150 ----------------CC--AGU--GGCGGACGGGUGAGUAA-CGCGUAA chl.G.max 200 GA-ACCUAC-CCUU------------------------------------ chl.G.max 250 -------------------------------------------------G chl.G.max 300 GGA---------GGGGAACAACAG------------------------CU chl.G.max 350 G(GAAA)CGG-CUGCUAAUACC-CCGU-AG-------------------- chl.G.max 400 ------------------GCU-------(GAGG---)-------AGC--- chl.G.max 450 ---AAAA-----------------------GGA-------------(--- chl.G.max 500 -------G-AA------)---------|----UCCGCCCGAGGA-GGG|G chl.G.max 550 -CUCGCGU|-CUGAUUA-GCUAGUUGG-UG-AG(G-CA-UAG)-CUUACC chl.G.max 600 AA|GGCGAUGAU|CAGUAGCUG|GUCC(GAGA)G-AUGAUCAGC|CACAC chl.G.max 650 UGGGA(CUGAGACGAG)GCCCAGA-C--UCU(UA-CG)GG-A--GGCAG- chl.G.max 700 CAGUGGGG-AAUUUUCCG-CAAU-G-GC-(-GAAA)-GC-U-GACGGA|G chl.G.max 750 CAAUGCCGCGUGAAGGUAGAAGGCC(---UAC---)GG-UC--AUGAACU chl.G.max 800 UC|UUUU-CCCGGAGAAGAAGC--------(--------)--------AA chl.G.max 850 UGACG|GUGAUCC-GGGGAA-UAAGCAUC|GGCU-AACU-CUGUG(CCA- chl.G.max 900 -GCGGCC|GCGGU---AA-)GACAGAG|GAUGCAAGCGUUAU-CCGGAAU chl.G.max 950 GAUUGGGC|G-AAAG-GUCUGUAGGUG|GCUUUUUAAG-|UUC-GCCGUC chl.G.max 1000 AAAUCCCAGGGC(------------------------------------- chl.G.max 1050 ---------------------------------UCA)ACCCUGG-AC-AG chl.G.max 1100 GCGGU--GGA-AAC-U|ACC-AA-G-CUGGAG-UA|CGGUA-----GGGG chl.G.max 1150 CAGAG|GGAAUUUCCGG-UGGAGCG(GUGAAA)UGCGUAGAGA---UCGG chl.G.max 1200 AAAGAACACCAAC---GGC(GAAA)GC|A|CUCUG-CUG|GGCCG--A-- chl.G.max 1250 -------------------------------------------------- chl.G.max 1300 ----------CACUGACACU|GAG-AGACGAAACUUAGGGGAGCGAAUGG chl.G.max 1350 G(AUU-A-GAUAC)-CCCAGUAG-|UC-CUA-GCCGUAAACGAUGGAU-- chl.G.max 1400 --AC|UA|GGCG-CUGUGCG------------------(-------uauc chl.G.max 1450 gacc-)-------------------------------------------- chl.G.max 1500 |------------------------------|-CGUGCAAUGCU-GUA-C chl.G.max 1550 (UAAC)GCGU-UAAGUAUCC|C|GCCUGGGGAGUACGUUC(GCAA)GAAU chl.G.max 1600 GAAACUCAAAGGAAUUGACGGGGGCC--GCACA-------AGCGGU|GGA chl.G.max 1650 GCAUGUGGUUUAAUUCG-(AUGCAAAG)CGAAGAACCUUACCAGGGCUUG chl.G.max 1700 ACA----UG|-CC-GCG--AA------UCCUCUU-----(GAA-A-)GAG chl.G.max 1750 AG-GGG---UG--CU---------(U-CG------)---------GGAA- chl.G.max 1800 ---------------|CGCGGACA|C|AGGUGGUGCAUG|GCU|GUCGUC chl.G.max 1850 A|-G-CUCGU|GCC(GUAA)GGUGUUGGG(UUAAGU)CCCGCAACGAGCG chl.G.max 1900 CAACCCUCG|UGUUUA-G-UUGCCa------------------------- chl.G.max 1950 -------------------------------------------------- chl.G.max 2000 -------------------------------------------------- chl.G.max 2050 -----------------------------(acauuuaguu)--------u chl.G.max 2100 |GGAACCCUGAGCAGACUGCCGGU(GAUAA----)--------------- chl.G.max 2150 ---------GCCGGAGGAAGGUGAGGAUGACGUCGAA--GUCAUCAUGCC chl.G.max 2200 CCUUAUGCCCUGGGCGAC-ACACGUGCUACAAU-------GGACAAAGGA chl.G.max 2250 UC----GCGAUCCC--------------------(----GCGA-)----- chl.G.max 2300 ---------------GGU-GAGCUAACU-CCAA-AAACCCGUCCUCAGUU chl.G.max 2350 CGGAUUGUAGGC(--UGCAACUC)GCCUGCAUGAAGCCGGAAUCGCU--- chl.G.max 2400 ---AGUAAU-CGCCGG(UC--AGCCAU)ACGGCGGUGAAUUC--GUU--- chl.G.max 2450 -----------------CCCGGGCCUUGUACACACCGCCCGUCACACUAU chl.G.max 2500 GGGAGCUGG-CCAUGCC-GAAGUCGUU---ACCUU-AACC-(-----gca chl.G.max 2550 a------)--G-AGG-GGG-AU-GCC----GA-AGGGGCUAGUGACUGGA chl.G.max 2600 GUGAAGUCGUAACAAGGUAGCCGUACU(GGAA)GGUGCGGCUGGAUCACC chl.G.max 2650 UCCUU~~~|~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ chl.G.max 2700 ~~~~~~~~~~~~~~~~| chl.P.sa.1 0 |-------GAAGCUCAUGGAGAG-UU(U-GA)UCCU|GGCUCAGGAUGAA chl.P.sa.1 50 CGC-UGGCGGCAUGCUU--UACACAUGCAAGUCGGACG|GG--------- chl.P.sa.1 100 -------aagu(gg------------------u-------)guuu----- chl.P.sa.1 150 ----------------CC--AGU--GGCGAACGGGUGAGUAA-CGCGUAA chl.P.sa.1 200 GA-ACCUGC-CCUU------------------------------------ chl.P.sa.1 250 -------------------------------------------------G chl.P.sa.1 300 GGA---------GGGGGACAACAG------------------------CU chl.P.sa.1 350 G(GAAA)CGG-CUGCUAAUACC-CCGU-AG-------------------- chl.P.sa.1 400 ------------------GCU-------(GAGG---)-------AGC--- chl.P.sa.1 450 ---GAAA-----------------------GGA-------------(--- chl.P.sa.1 500 -------GGAA------)---------|----UCCGCCCAAGGA-GGG|G chl.P.sa.1 550 -CUCGCGU|-CUGAUUA-GCUAGUUGG-UG-AG(G-UAAUAG)-CUUACC chl.P.sa.1 600 AA|GGCGAUGAU|CAGUAGCUG|GUCC(GAGA)GGAUGAUCAGC|CACAC chl.P.sa.1 650 UGGGA(CUGAGACAAG)GUCCAGA-C--UCC(UA-CG)GG-A--GGCAG- chl.P.sa.1 700 CAGUGGGG-AAUUUUCCG-CAAU-GGGC-(-GAAA)-GCCU-GACGGA|G chl.P.sa.1 750 CAAUGCCGCGUGGAGGUAGAGGCCC(---CU-G--)GG-UC--AUGAACU chl.P.sa.1 800 UC|UUUU-CCCGGAGAAGAAAA--------(--------)--------AA chl.P.sa.1 850 UGACG|GU-AUCC-GGGGAA-UAAGCAUC|GGCU-AACU-CUGUG(CCA- chl.P.sa.1 900 -GCAGCC|GCGGU---AA-)GACAGAG|GAUGCAAGCGUUAU-CCGGAAU chl.P.sa.1 950 GAUUGGGC|GUAAAGCGUCUGUAGGUG|GCUUUUUAAG-|UUC-GCUGUC chl.P.sa.1 1000 AAAUACCAGGGC(------------------------------------- chl.P.sa.1 1050 ---------------------------------UCA)ACCCUGG-AC-AG chl.P.sa.1 1100 GUGGU--GAA-AAC-U|ACU-AA-G-CUAGAG-UA|CGGUA-----GGGG chl.P.sa.1 1150 CAGAG|GGAAUUUCCGG-UGGAGCG(AUGAAA)UGCGUAGAGA---UCGG chl.P.sa.1 1200 AAGGAACACCAAC---GGC(GAAA)GA|A|CUCUG-CUG|GGCCG--A-- chl.P.sa.1 1250 -------------------------------------------------- chl.P.sa.1 1300 ----------CACUGACACU|GAG-AGACGAAAGCUAGGGGAGCGAAUGG chl.P.sa.1 1350 G(AUU-A-GAGAC)-CCCAGUAG-|UC-CUA-GCCGUAAACGAUGGAU-- chl.P.sa.1 1400 --AC|UA|AGUGGCUGUGCG-----------------a(-------uauc chl.P.sa.1 1450 gacc-)-------------------------------------------- chl.P.sa.1 1500 |------------------------------|-CGUGCAACGCU-GUA-C chl.P.sa.1 1550 (UAAC)GCGU-UAAGUAUCC|C|GCCUGGGGAGUACGUUC(GCAA)GAAU chl.P.sa.1 1600 GAAACUCAAAGGAAUUGACGGGGGCC--GCACA-------AGCGGU|GGA chl.P.sa.1 1650 GCAUGUGGUUUAAUUCG-(AUGCAAAG)CGAAGAACCUUACCAGGGCUUG chl.P.sa.1 1700 ACA----UG|--C-GCG--AA------UCCUCUU-----(GAA-A-)GAG chl.P.sa.1 1750 AG-GAG---UG--CC---------(UUCG------)---------GGAA- chl.P.sa.1 1800 ---------------|UGCG-ACA|C|AGGUGGUGCAUG|GCU|GUCGUC chl.P.sa.1 1850 A|-G-CUCGU|GCC(GUGA)GGUGUUGGG(UUAAGU)CCCGCAACGAGCG chl.P.sa.1 1900 CAACCCUCG|UGUUUA-G-UUGCCa------------------------- chl.P.sa.1 1950 -------------------------------------------------- chl.P.sa.1 2000 -------------------------------------------------- chl.P.sa.1 2050 -----------------------------(acguuuaguu)--------u chl.P.sa.1 2100 |GGAACUCUGAACAGACUGCCGGU(GAUAA----)--------------- chl.P.sa.1 2150 ---------GCCGGAGGAAGGUGAGGAUGACGUC-AA--GUCAUCAUGCC chl.P.sa.1 2200 CCUUAUGCCCUGGGCUAC-ACAC-UGCUACAAUGGA--CCGGACAAAGGA chl.P.sa.1 2250 UC----GCGACCCC--------------------(----GCGA-)----- chl.P.sa.1 2300 --------------GGGU-GAGCUAACU-UCAA-AAACCUGUCCUCAGUU chl.P.sa.1 2350 CGGAUUGUAGGC(--UGCAACUC)GCCUACAUGAAGCCGGAAUCGCU--- chl.P.sa.1 2400 ---AGUAAU-CGCCGG(UC--AGCCAU)ACGGCGGUGAAUUC--GUU--- chl.P.sa.1 2450 -----------------CCCGGGCCUUGUACACACCGCCCGUCACACUAU chl.P.sa.1 2500 GGGAGCUGG-CCAUGCCCGAAGUCAUU---ACCUU-AACC-(-----gca chl.P.sa.1 2550 a------)-GG-AGG-GGG-AU-GCCG-AAGG-CAGGGCUAGUGACUGGA chl.P.sa.1 2600 GUGAAGUCGUAACAAGGUAGCCGUACU(GGAA)GGUGCGACUGGAUCACC chl.P.sa.1 2650 UCCU~~~~|~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ chl.P.sa.1 2700 ~~~~~~~~~~~~~~~~| chl.P.sa.2 0 |-------GAAGCUCAUGGAGAG-UU(U-GA)UCCU|GGCUCAGGAUGAA chl.P.sa.2 50 CGC-UGGCGGCAUGCUU--UACACAUGCAAGUCGGACG|GG--------- chl.P.sa.2 100 -------aagu(gg------------------u-------)guuu----- chl.P.sa.2 150 ----------------CC--AGU--GGCGAACGGGUGAGUAA-CGCGUAA chl.P.sa.2 200 GA-ACCUGC-CCUU------------------------------------ chl.P.sa.2 250 -------------------------------------------------G chl.P.sa.2 300 GGA---------GGGGGACAACAG------------------------CU chl.P.sa.2 350 G(GAAA)CGG-CUGCUAAUACC-CCGU-AG-------------------- chl.P.sa.2 400 ------------------GCU-------(GAGG---)-------AGC--- chl.P.sa.2 450 ---GAAA-----------------------GGA-------------(--- chl.P.sa.2 500 -------GGAA------)---------|----UCCGCCCAAGGA-GGG|G chl.P.sa.2 550 -CUCGCGU|-CUGAUUA-GCUAGUUGG-UG-AG(G-UAAUAG)-CUUACC chl.P.sa.2 600 AA|GGCGAUGAU|CAGUAGCUG|GUCC(GAGA)GGAUGAUCAGC|CACAC chl.P.sa.2 650 UGGGA(CUGAGACAAG)GUCCAGA-C--UCC(UA-CG)GG-A--GGCAG- chl.P.sa.2 700 CAGUGGGG-AAUUUUCCG-CAAU-GGGC-(-GAAA)-GCCU-GACGGA|G chl.P.sa.2 750 CAAUGCCGCGUGGAGGUAGAGGCCC(---CU-G--)GG-UC--AUGAACU chl.P.sa.2 800 UC|UUUU-CCCGGAGAAGAAAA--------(--------)--------AA chl.P.sa.2 850 UGACG|GU-AUCC-GGGGAA-UAAGCAUC|GGCU-AACU-CUGUG(CCA- chl.P.sa.2 900 -GCAGCC|GCGGU---AA-)GACAGAG|GAUGCAAGCGUUAU-CCGGAAU chl.P.sa.2 950 GAUUGGGC|GUAAAGCGUCUGUAGGUG|GCUUUUUAAG-|UUC-GCUGUC chl.P.sa.2 1000 AAAUACCAGGGC(------------------------------------- chl.P.sa.2 1050 ---------------------------------UCA)ACCCUGG-AC-AG chl.P.sa.2 1100 GUGGU--GAA-AAC-U|ACU-AA-G-CUAGAG-UA|CGGUA-----GGGG chl.P.sa.2 1150 CAGAG|GGAAUUUCCGG-UGGAGCG(AUGAAA)UGCGUAGAGA---UCGG chl.P.sa.2 1200 AAGGAACACCAAC---GGC(GAAA)GA|A|CUCUG-CUG|GGCCG--A-- chl.P.sa.2 1250 -------------------------------------------------- chl.P.sa.2 1300 ----------CACUGACACU|GAG-AGACGAAAGCUAGGGGAGCGAAUGG chl.P.sa.2 1350 G(AUU-A-GAGAC)-CCCAGUAG-|UC-CUA-GCCGUAAACGAUGGAU-- chl.P.sa.2 1400 --AC|UA|AGUGGCUGUGCG-----------------a(-------uauc chl.P.sa.2 1450 gacc-)-------------------------------------------- chl.P.sa.2 1500 |------------------------------|-CGUGCAACGCU-GUA-C chl.P.sa.2 1550 (UAAC)GCGU-UAAGUAUCC|C|GCCUGGGGAGUACGUUC(GCAA)GAAU chl.P.sa.2 1600 GAAACUCAAAGGAAUUGACGGGGGCC--GCACA-------AGCGGU|GGA chl.P.sa.2 1650 GCAUGUGGUUUAAUUCG-(AUGCAAAG)CGAAGAACCUUACCAGGGCUUG chl.P.sa.2 1700 ACA----UG|--C-GCG--AA------UCCUCUU-----(GAA-A-)GAG chl.P.sa.2 1750 AG-GAG---UG--CC---------(UUCG------)---------GGAA- chl.P.sa.2 1800 ---------------|UGCG-ACA|C|AGGUGGUGCAUG|GCU|GUCGUC chl.P.sa.2 1850 A|-G-CUCGU|GCC(GUGA)GGUGUUGGG(UUAAGU)CCCGCAACGAGCG chl.P.sa.2 1900 CAACCCUCG|UGUUUA-G-UUGCCa------------------------- chl.P.sa.2 1950 -------------------------------------------------- chl.P.sa.2 2000 -------------------------------------------------- chl.P.sa.2 2050 -----------------------------(acguuuaguu)--------u chl.P.sa.2 2100 |GGAACUCUGAACAGACUGCCGGU(GAUAA----)--------------- chl.P.sa.2 2150 ---------GCCGGAGGAAGGUGAGGAUGACGUC-AA--GUCAUCAUGCC chl.P.sa.2 2200 CCUUAUGCCCUGGGCUAC-ACAC-UGCUACAAUGGA--CCGGACAAAGGA chl.P.sa.2 2250 UC----GCGACCCC--------------------(----GCGA-)----- chl.P.sa.2 2300 --------------GGGU-GAGCUAACU-UCAA-AAACCUGUCCUCAGUU chl.P.sa.2 2350 CGGAUUGUAGGC(--UGCAACUC)GCCUACAUGAAGCCGGAAUCGCU--- chl.P.sa.2 2400 ---AGUAAU-CGCCGG(UC--AGCCAU)ACGGCGGUGAAUUC--GUU--- chl.P.sa.2 2450 -----------------CCCGGGCCUUGUACACACCGCCCGUCACACUAU chl.P.sa.2 2500 GGGAGCUGG-CCAUGCCCGAAGUCAUU---ACCUU-AACC-(-----gca chl.P.sa.2 2550 a------)-GG-AGG-GGG-AU-GCCG-AAGG-CAGGGCUAGUGACUGGA chl.P.sa.2 2600 GUGAAGUCGUAACAAGGUAGCCGUACU(GGAA)GGUGCGACUGGAUCACC chl.P.sa.2 2650 UCCU~~~~|~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ chl.P.sa.2 2700 ~~~~~~~~~~~~~~~~| chl.P.sa.3 0 |-------GAAGCUCAUGGAGAG-UU(U-GA)UCCU|GGCUCAGGAUGAA chl.P.sa.3 50 CGC-UGGCGGCAUGCUU--UACACAUGCAAGUCGGACG|GG--------- chl.P.sa.3 100 -------aagu(gg------------------u-------)guuu----- chl.P.sa.3 150 ----------------CC--AGU--GGCGAACGGGUGAGUAA-CGCGUAA chl.P.sa.3 200 GA-ACCUGC-CCUU------------------------------------ chl.P.sa.3 250 -------------------------------------------------G chl.P.sa.3 300 GGA---------GGGGGACAACAG------------------------CU chl.P.sa.3 350 G(GAAA)CGG-CUGCUAAUACC-CCGU-AG-------------------- chl.P.sa.3 400 ------------------GCU-------(GAGG---)-------AGC--- chl.P.sa.3 450 ---GAAA-----------------------GGA-------------(--- chl.P.sa.3 500 -------GGAA------)---------|----UCCGCCCAAGGA-GGG|G chl.P.sa.3 550 -CUCGCGU|-CUGAUUA-GCUAGUUGG-UG-AG(G-UAAUAG)-CUUACC chl.P.sa.3 600 AA|GGCGAUGAU|CAGUAGCUG|GUCC(GAGA)GGAUGAUCAGC|CACAC chl.P.sa.3 650 UGGGA(CUGAGACAAG)GUCCAGA-C--UCC(UA-CG)GG-A--GGCAG- chl.P.sa.3 700 CAGUGGGG-AAUUUUCCG-CAAU-GGGC-(-GAAA)-GCCU-GACGGA|G chl.P.sa.3 750 CAAUGCCGCGUGGAGGUAGAGGCCC(---CU-G--)GG-UC--AUGAACU chl.P.sa.3 800 UC|UUUU-CCCGGAGAAGAAAA--------(--------)--------AA chl.P.sa.3 850 UGACG|GU-AUCC-GGGGAA-UAAGCAUC|GGCU-AACU-CUGUG(CCA- chl.P.sa.3 900 -GCAGCC|GCGGU---AA-)GACAGAG|GAUGCAAGCGUUAU-CCGGAAU chl.P.sa.3 950 GAUUGGGC|GUAAAGCGUCUGUAGGUG|GCUUUUUAAG-|UUC-GCUGUC chl.P.sa.3 1000 AAAUACCAGGGC(------------------------------------- chl.P.sa.3 1050 ---------------------------------UCA)ACCCUGG-AC-AG chl.P.sa.3 1100 GUGGU--GAA-AAC-U|ACU-AA-G-CUAGAG-UA|CGGUA-----GGGG chl.P.sa.3 1150 CAGAG|GGAAUUUCCGG-UGGAGCG(AUGAAA)UGCGUAGAGA---UCGG chl.P.sa.3 1200 AAGGAACACCAAC---GGC(GAAA)GC|A|CUCUG-CUG|GGCCG--A-- chl.P.sa.3 1250 -------------------------------------------------- chl.P.sa.3 1300 ----------CACUGACACU|GAG-AGACGAAAGCUAGGGGAGCGAAUGG chl.P.sa.3 1350 G(AUU-A-GAGAC)-CCCAGUAG-|UC-CUA-GCCGUAAACGAUGGAU-- chl.P.sa.3 1400 --AC|UA|AGUGGCUGUGCG------------------(-------uauc chl.P.sa.3 1450 gacc-)-------------------------------------------- chl.P.sa.3 1500 |------------------------------|-CGUGCAACGCU-GUAGC chl.P.sa.3 1550 (UAAC)GCGU-UAAGUAUCC|C|GCCUGGGGAGUACGUUC(GCAA)GAAU chl.P.sa.3 1600 GAAACUCAAAGGAAUUGACGGGGGCCC-GCACA-------AGCGGU|GGA chl.P.sa.3 1650 GCAUGUGGUUUAAUUCG-(AUGCAAAG)CGAAGAACCUUACCAGGGCUUG chl.P.sa.3 1700 ACA----UG|--C-GCG--AA------UCCUCUU-----(GAA-A-)GAG chl.P.sa.3 1750 AG-GAG---UG--CC---------(UUCG------)---------GGAA- chl.P.sa.3 1800 ---------------|UGCG-ACA|C|AGGUGGUGCAUG|GCU|GUCGUC chl.P.sa.3 1850 A|-G-CUCGU|GCC(GUGA)GGUGUUGGG(UUAAGU)CCCGCAACGAGCG chl.P.sa.3 1900 CAACCCUCG|UGUUUA-G-UUGCCa------------------------- chl.P.sa.3 1950 -------------------------------------------------- chl.P.sa.3 2000 -------------------------------------------------- chl.P.sa.3 2050 -----------------------------(acguuuaguu)--------u chl.P.sa.3 2100 |GGAACUCUGAACAGACUGCCGGU(GAUAA----)--------------- chl.P.sa.3 2150 ---------GCCGGAGGAAGGUGAGGAUGACGUC-AA--GUCAUCAUGCC chl.P.sa.3 2200 CCUUAUGCCCUGGGCUAC-ACACGUGCUACAAUGGA--CCGGACAAAGGA chl.P.sa.3 2250 UC----GCGACCCC--------------------(----GCGA-)----- chl.P.sa.3 2300 --------------GGGU-GAGCUAACU-UCAA-AAACCUGUCCUCAGUU chl.P.sa.3 2350 CGGAUUGUAGGC(--UGCAACUC)GCCUACAUGAAGCCGGAAUCGCU--- chl.P.sa.3 2400 ---AGUAAU-CGCCGG(UC--AGCCAU)ACGGCGGUGAAUUC--GUU--- chl.P.sa.3 2450 -----------------CCCGGGCCUUGUACACACCGCCCGUCACACUAU chl.P.sa.3 2500 GGGAGCUGG-CCAUGCCCGAAGUCAUU---ACCUU-AACC-(-----gca chl.P.sa.3 2550 a------)-GG-AGG-GGG-AU-GCCG-AAGG-CAGGGCUAGUGACUGGA chl.P.sa.3 2600 GUGAAGUCGUAACAAGGUAGCCGUACU(GGAA)GGUGCGACUGGAUCACC chl.P.sa.3 2650 UCCU~~~~|~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ chl.P.sa.3 2700 ~~~~~~~~~~~~~~~~| chl.A.glut 0 |~~~~~~~~~~~~~~~~~~~~~~~~~(~~~~)~~~~|~~~~~~~~~~~~~ chl.A.glut 50 ~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GGACG|GG--------- chl.A.glut 100 -------aagu(gg------------------u-------)guuu----- chl.A.glut 150 ----------------CC--AGU--GGCGGACGGGUGAGUAA-CGCGUAA chl.A.glut 200 GA-ACCUGC-CCUU------------------------------------ chl.A.glut 250 -------------------------------------------------G chl.A.glut 300 GGA---------GGGGAACAACAG------------------------CU chl.A.glut 350 G(GAAA)CGG-CUGCUAAUACC-CCGU-AG-------------------- chl.A.glut 400 ------------------GCU-------(GAGG---)-------AGC--- chl.A.glut 450 ---AAAA-----------------------GGA-------------(--- chl.A.glut 500 -------GGAA------)---------|----UCCGCCUGAGGA-GGG|G chl.A.glut 550 -CUCGCGU|-CUGAUUA-GCUAGUUGG-UG-AG(G-CAAUAG)-CUUACC chl.A.glut 600 AA|GGCGAUGAU|CAGUAGCUG|GUCC(GAGA)GGAUGAUCAGC|CACAC chl.A.glut 650 UGGGA(CUGAGACACG)GCCCAGA-C--UCC(UA-CG)GG-A--GGCAG- chl.A.glut 700 CAGUGGGG-AAUUUUCCG-CAAU-GGGC-(-GAAA)-GCCU-GACGGA|G chl.A.glut 750 CAAUGCCGCGUGGAGGUAGAAGGCC(---UACG--)GG-UC--GUGAACU chl.A.glut 800 UC|UUUU-CCCGGAGAAGAAGC--------(--------)--------AA chl.A.glut 850 UGACG|GU-AUCU-GGGGAA-UAAGCAUC|GGCU-AACU-CUGUG(CCA- chl.A.glut 900 -GCAGCC|GCGGU---AA-)UACAGAG|GAUGCAAGCGUUAU-CCGGAAU chl.A.glut 950 GAUUGGGC|GUAAAGCGUCUGUAGGUG|GCUUUCUAAG-|UCC-GCCGUC chl.A.glut 1000 AAAUCCCAGGGC(------------------------------------- chl.A.glut 1050 ---------------------------------UCA)ACCCUGG-AC-AG chl.A.glut 1100 GCGGU--GGA-AAC-U|ACC-AA-G-CUGGAG-UA|CGGUA-----GGGG chl.A.glut 1150 CAGAG|GGAAUUUCCGG-UGGAGCG(GUGAAA)UGCGUAGAGA---UCGG chl.A.glut 1200 AAAGAACACCAAC---GGC(GAAA)GC|A|CUCUG-CUG|GGCCG--A-- chl.A.glut 1250 -------------------------------------------------- chl.A.glut 1300 ----------CGCUGACACU|GAG-AGACGAAAGCUAGGGGAGCGAAUGG chl.A.glut 1350 G(AUU-A-GAUAC)-CCCAGUAG-|UC-CUA-GCCGUAAACGAUGGAU-- chl.A.glut 1400 --AC|UA|GGCG-CUGUGCG------------------(-------uauc chl.A.glut 1450 gacc-)-------------------------------------------- chl.A.glut 1500 |------------------------------|-CGUGCAGUGCU-GUAGC chl.A.glut 1550 (UAAC)GCGU-UAAGUAUCC|C|GCCUGGGGAGUACGUUC(GCAA)GAAU chl.A.glut 1600 GAAACUCAAAGGAAUUGACGGGGGCCC-GCACA-------AGCGGU|GGA chl.A.glut 1650 GCAUGUGGUUUAAUUCG-(AUCCAAAG)CGAAGAACCUUACCAGGGCUUG chl.A.glut 1700 ACA----U-|-CC-GCG--AA------UCCUCUU-----(GAA-A-)GAG chl.A.glut 1750 AG-GGG---UG--CC---------(UUCG------)---------GGAA- chl.A.glut 1800 ---------------|CGCGGACA|C|AGGUGGUGCAUG|GCU|GUCGUC chl.A.glut 1850 A|-G-CUCGU|GCC(GUAA)GGUGUUGGG(GUAA-U)CCCGCAACGAUCA chl.A.glut 1900 CAACC~~~~|~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ chl.A.glut 1950 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ chl.A.glut 2000 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ chl.A.glut 2050 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~(~~~~~~~~~~)~~~~--~~~ chl.A.glut 2100 |~~~~~~~~~~~~~~~~~~~~~~~(~~~~~~~~~)~~~~~~~~~~~~~~~ chl.A.glut 2150 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ chl.A.glut 2200 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ chl.A.glut 2250 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~(~~~~~~~~~)~~~~~ chl.A.glut 2300 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~ chl.A.glut 2350 ~~~~~~~~~~~~(~~~~~~~~~~)~~~~~~~~~~~~~~~~~~~~~~~~~~ chl.A.glut 2400 ~~~~~~~~~~~~~~~~(~~~~~~~~~~)~~~~~~~~~~~~~~~~~~~~~~ chl.A.glut 2450 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ chl.A.glut 2500 ~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~(~~~~-~~~ chl.A.glut 2550 ~~~~~~~)~~~~~~~-~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~ chl.A.glut 2600 ~~~~~~~~~~~~~~~~~~~~~~~~~~~(~~~~)~~~~~~~~~~~~~~~~~ chl.A.glut 2650 ~~~~~~~~|~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ chl.A.glut 2700 ~~~~~~~~~~~~~~~~| chl.A.inca 0 |~~~~~~~~~~UCUCAUGGAGAG-UU(C-GA)UCCU|GGCUCAGGAUGAA chl.A.inca 50 CGC-UGGCGGCAUGCUU--AACACAUGCAAGUCGGACG|GG--------- chl.A.inca 100 -------aagu(gg------------------u-------)guuu----- chl.A.inca 150 ----------------CC--AGU--GGCGGACGGGUGAGUAA-CGCGUAA chl.A.inca 200 GA-ACCUGC-CCUU------------------------------------ chl.A.inca 250 -------------------------------------------------G chl.A.inca 300 GGA---------GGGGAACAACAG------------------------CU chl.A.inca 350 G(GAAA)CGG-CUGCUAAUACC-CCGU-AG-------------------- chl.A.inca 400 ------------------GCU-------(GAGG---)-------AGC--- chl.A.inca 450 ---AAAA-----------------------GGA-------------(--- chl.A.inca 500 -------GGAA------)---------|----UCCGCCUGAGGA-GGG|G chl.A.inca 550 -CUCGCGU|-CUGAUUA-GCUAGUUGG-UG-AG(G-CAAUAG)-CUUACC chl.A.inca 600 AA|GGCGAUGAU|CAGUAGCUG|GUCC(GAGA)GGAUGAUCAGC|CACAC chl.A.inca 650 UGGGA(CUGAGACACG)GCCCAGA-C-CUCC(UA-CG)GG-A--GGCAG- chl.A.inca 700 CAGUGGGG-AAUUUUCCG-CAAU-GGGC-(-GAAA)-GC-UGGACGGA|G chl.A.inca 750 CAAUGCCGCGUGGAGGUAGAAGGCC(---UACG--)GG-UC--GUGAACU chl.A.inca 800 UC|UUUU-CCCGGAGAAGAAGC--------(--------)--------AA chl.A.inca 850 UGACG|GU-AUCU-GGGGAA-UAAGCAUC|GGCU-AACU-CUGUG(CCA- chl.A.inca 900 -GCAGCC|GCGGU---AA-)UACAGAG|GAUGCAAGCGUUAU-CCGGAAU chl.A.inca 950 GAUUGGGC|GUAAAGCGUCUGUAGGUG|GCUUUUUAAG-|UCC-GCCGUC chl.A.inca 1000 AAAUCCCAGGGC(------------------------------------- chl.A.inca 1050 ---------------------------------UCA)ACCCUGG-AC-AG chl.A.inca 1100 GCGGU--GGA-AAC-U|ACC-AA-G-CUGGAG-UA|CGGUA-----GGGG chl.A.inca 1150 CAGAG|GGAAUUUCCGG-UGGAGCG(GUGAAA)UGCGUAGAGA---UCGG chl.A.inca 1200 AAAGAACACCAAC---GGC(GAAA)GC|A|CUCUG-CUG|GGCCG--A-- chl.A.inca 1250 -------------------------------------------------- chl.A.inca 1300 ----------CACUGACACU|GAG-AGACGAAAGCUAGGGGAGCGAAUGG chl.A.inca 1350 G(AUU-A-GAUAC)-CCCAGUAG-|UC-CUA-GCCGUAAACGAUGGAU-- chl.A.inca 1400 --AC|UA|GGCG-CUGUGCG------------------(-------uauc chl.A.inca 1450 gacc-)-------------------------------------------- chl.A.inca 1500 |------------------------------|-CGUGCAGUGCU-GUAGC chl.A.inca 1550 (UAAC)GCGU-UAAGUAUCC|C|GCCUGGGGAGUACGUUC(GCAA)GAAU chl.A.inca 1600 GAAACUCAAAGGAAUUGACGGGGGCCC-GCACA-------AGCGGU|GGA chl.A.inca 1650 GCAUGUGGUUUAAUUCG-(AUGCAAAG)CGAAGAACCUUACCAGGGCUUG chl.A.inca 1700 ACA----UG|-CC-GCG--AA------UCCUCUU-----(GAA-A-)GAG chl.A.inca 1750 AG-GGG---UG--CC---------(UUCG------)---------GGAA- chl.A.inca 1800 ---------------|CGCGGACA|C|AGGUGGUGCAUG|GCU|GUCGUC chl.A.inca 1850 A|-G-CUCGU|GCC(GUAA)GGUGUUGGG(UUAAGU)CCCGCAACGAGCG chl.A.inca 1900 CAACCCUCG|UGUUUA-G-UUGCCa------------------------- chl.A.inca 1950 -------------------------------------------------- chl.A.inca 2000 -------------------------------------------------- chl.A.inca 2050 -----------------------------(ccguugaguu)--------u chl.A.inca 2100 |GGAACCCUGAGCAGACUGCCGGU(GAUAA----)--------------- chl.A.inca 2150 ---------GCCGGAGGAAGGUGAGGAUGACGUC-AA--GUCAUCAUGCC chl.A.inca 2200 CCUUAUGCCCUGGGCGAC-ACACGUGCUACAAUGGC--CGGGACAAAGGG chl.A.inca 2250 UC----GCGAUCCC--------------------(----GCGA-)----- chl.A.inca 2300 --------------GGGU-GAGCUAACC-CCAA-AAACCCGUCCUCAGUU chl.A.inca 2350 CGGAUUGUAGGC(--UGCAACUC)GCCUGCAUGAAGCCGGAAUCGCU--- chl.A.inca 2400 ---AGUAAU-CGCCGG(UC--AGCCAU)ACGGCGGUGAAUUC--GUU--- chl.A.inca 2450 -----------------CCCGGGCCUUGUACACACCGCCCGUCACACUAU chl.A.inca 2500 GGGAGCUGG-CCAUGCCCGAAGUCGUU---ACCUU-AACC-(-----aca chl.A.inca 2550 a------)-GG-AGG-GGG-AU-GCCG-AAGG-CAGGGCUAGUGACUGGA chl.A.inca 2600 GUGAAGUCGUAACAAGGUAGCCGUACU(GGAA)GGUGCGGCUGGAUCACC chl.A.inca 2650 UCCUUU--|~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ chl.A.inca 2700 ~~~~~~~~~~~~~~~~| chl.C.papa 0 |~~~~~~~~~~~~~~~~~~~~~~~~~(~~~~)~caU|GGCUCAGAUUGAA chl.C.papa 50 CGC-UGGCGGCAUGCUU--AACACAUGCAAGUCGGACG|GG--------- chl.C.papa 100 -------aagu(gg------------------u-------)guuu----- chl.C.papa 150 ----------------CC--AGU--GGCGGACGGGUGAGUAA-CGCGUAA chl.C.papa 200 GA-ACCUGC-CCUU------------------------------------ chl.C.papa 250 -------------------------------------------------G chl.C.papa 300 GGA---------GGGGAACAACAG------------------------CU chl.C.papa 350 G(GAAA)CGG-CUGCUAAUACC-CCGU-AG-------------------- chl.C.papa 400 ------------------GCU-------(GAGG---)-------AGC--- chl.C.papa 450 ---AAAA-----------------------GGA-------------(--- chl.C.papa 500 -------GGAA------)---------|----UCCGCCCGAGGA-GGG|G chl.C.papa 550 -CUCGCGU|-CUGAUUA-GCUAGUUGG-UG-AG(G-CAAUAG)-CUUACC chl.C.papa 600 AA|GGCGAUGAU|CAGUAGCUG|GUCC(GAGA)GGAUGAUCAGC|CACAC chl.C.papa 650 UGGGA(CUGAGACACG)GCCCAGAUC--UCC(UA-CG)GG-A--GGCAG- chl.C.papa 700 CAGUAGGG-AAUUUUCCG-CAAU-GGGC-(-GAAA)-GCU--GACGGA|G chl.C.papa 750 CAAUGCCGCGUGGAGGUAGAAGGCC(---CACG--)GG-UC--GUGAACU chl.C.papa 800 UC|UUUU-CCCGGAGAAGAAGC--------(--------)--------AA chl.C.papa 850 UGACG|GU-AUCC-GGGGAA-UAAGCAUC|GGCU-AACU-CUGUG(CCA- chl.C.papa 900 -GCAGCC|GCGGU---AA-)UACAGAG|GAUGCAAGCGUUAU-CCGGAAU chl.C.papa 950 GAUUGGGC|GUAAAGCGUCUGUAGGUG|GCUUUUUAAG-|UCC-GCCGUC chl.C.papa 1000 AAAUCCCAGGGC(------------------------------------- chl.C.papa 1050 ---------------------------------UCA)ACCCUGG-AC-AG chl.C.papa 1100 GCGGU--GGA-AAC-U|ACC-AA-G-CUGGAG-UA|CGGUA-----GGGG chl.C.papa 1150 CAGAG|GGAAUUUCCGG-UGGAGCG(GUGAAA)UGCGUAGAGA---UCGG chl.C.papa 1200 AAAGAACAGGAAC---GGC(GAAA)GC|A|CUCUG-CUG|GGCCG--A-- chl.C.papa 1250 -------------------------------------------------- chl.C.papa 1300 ----------CACUGACACU|GAG-AGACGAAAGCUAGGGGAGCGAAUGG chl.C.papa 1350 G(AUU-A-GAUAC)-CCCAGUAG-|UC-CUA-GCCGUAAACGAUGGAU-- chl.C.papa 1400 --AC|UA|GGCG-CUGUGCG------------------(-------uauc chl.C.papa 1450 gacc-)-------------------------------------------- chl.C.papa 1500 |------------------------------|-CGUGCAGUGCU-GUAGC chl.C.papa 1550 (UAAC)GCGU-UAAGUAUCC|C|GCCUGGGGAGUACGUUC(GCAA)GAAU chl.C.papa 1600 GAAACUCAAAGGAAUUGACGGGGGCCC-GCACA-------AGCGGU|GGA chl.C.papa 1650 GCAUGUGGUUUAAUUCG-(AUGCAAAG)CGAAGAACCUUACCAGGGCUUG chl.C.papa 1700 ACA----UG|-CC-GCG--AA------UCCUCUU-----(GAA-A-)GAG chl.C.papa 1750 AG-GGG---UG--CC---------(UUCG------)---------GGAA- chl.C.papa 1800 ---------------|CGCGGACA|C|AGGUGGUGCAUG|GCU|GUCGUC chl.C.papa 1850 A|-G-CUCGU|GCC(GUAA)GGUGUUGGG(UUAAGU)CCCGCAACGAGCG chl.C.papa 1900 CAACCCUCG|UGUUUA-G-UUGCCa------------------------- chl.C.papa 1950 -------------------------------------------------- chl.C.papa 2000 -------------------------------------------------- chl.C.papa 2050 -----------------------------(ccguugaguu)--------u chl.C.papa 2100 |GGAACCCUGAGCAGACUGCCGGU(GAUAA----)--------------- chl.C.papa 2150 ---------GCCGGAGGAAGGUGAGGAUGACGUC-AA--GUCAUCAUGCC chl.C.papa 2200 CCUUAUGCCCUGGGCGAC-ACACGUGCUACAAUGGC--CGGGACAAAGGG chl.C.papa 2250 UC----GCGAUCCC--------------------(----GCGA-)----- chl.C.papa 2300 --------------GGGU-GAGCUAACU-CCAA-AAACCCGUCCUCAGUU chl.C.papa 2350 CGGAUUGCAGGC(--UGCAACUC)GCCUGCAUGAAGCCGGAAUCGCU--- chl.C.papa 2400 ---AGUAAU-CGCCGG(UC--AGCCAU)ACGGCGGUGAAUUC--GUU--- chl.C.papa 2450 -----------------CCCGGGCCUUGUACACACCGCCCGUCACACUAU chl.C.papa 2500 GGGAGCUGG-CCAUGCCCGAAGUCGUU---ACCUU-AACC-(-----gca chl.C.papa 2550 a------)-GG--AG-GGGgAU-GCCG-AAGG-CAGGGCUAGUGACUGGA chl.C.papa 2600 GUGAAGUCGUAACAAGGUAGCCGUACU(GGAA)GGUGCGGCUGGAUCACC chl.C.papa 2650 UCCUUU--|~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ chl.C.papa 2700 ~~~~~~~~~~~~~~~~| chl.Cor.cr 0 |~~~~~~~~~~~~~~~~~~~~~~~~~(~~~~)~~~~|~~~~~~~~~~~~~ chl.Cor.cr 50 ~~~-~~~~~~AAUACUU--AACACAUGCAAGUUACAAA|UUU-------- chl.Cor.cr 100 -----------(-g------------------gaaaa---)--------- chl.Cor.cr 150 ----------------UUA-UUU--AGCGUGCGGGUG-AGUA-UAAUUAA chl.Cor.cr 200 GA-ACUUAA-CUUA------------------------------------ chl.Cor.cr 250 -------------------------------------------------A chl.Cor.cr 300 CUU---------AAAAAUUAUAUU------------------------UA chl.Cor.cr 350 A(UAAA)AAA-AAAAAAAUAAA-AAAA-AA-------------------- chl.Cor.cr 400 ------------------AUU-------(UAAU---)-------AAU--- chl.Cor.cr 450 ---AUUU-----------------------AUU-------------(--- chl.Cor.cr 500 -------uuaa------)---------|----GAAAGGCUAUAU----|- chl.Cor.cr 550 --------|--UGAUUA-GUUAUUUGA-AA-AA(C-UAAAAA)-AUUUUC chl.Cor.cr 600 AA|GACAUUUAU|CAAAAAUUG|AUUU(UAUC)GGAUGAUCAAU|CACAU chl.Cor.cr 650 UGGGA(AUUAAAAAUG)ACUCAAA-UUCUUU(UUUUU)UAGA--AGCAG- chl.Cor.cr 700 CAGUGGGG-AAUUUUUCG-CAAU-AAAC-(-GAAA)-GUUU-GACGAA|U chl.Cor.cr 750 UAAUUUUUAAUGAAAGAAGAAGGCU(---AAAG--)AG-UC--GUAAAUA chl.Cor.cr 800 UC|uUUU-AUUAUAUAAAaagu--------(---auu-u)--------ua chl.Cor.cr 850 ugaUA|AU--UAU-AAUGAA-UAAGUAUC|GGCU-AAUU-CUGUG(CCA- chl.Cor.cr 900 -GCAGCC|GCGGU---AA-)UACAGAA|GAUACAAGUGUUAUuCCAAAAU chl.Cor.cr 950 UAUUAGGC|GUAAAAUGUUCUAAAAUU|GCUUUUUAAA-|UCG-uAUAUU chl.Cor.cr 1000 aaaaa---uaau(------------------------------------- chl.Cor.cr 1050 ---------------------------------aaa)auuau---AA-AA chl.Cor.cr 1100 AUAUU--CGA-AAU-U|UUU-UA-G-CuagAA-UU|uuauu--aaaaaaa chl.Cor.cr 1150 agaga|aauuAACGUAG-UGUAAUG(GUAAAA)UAUAUAUAGA---UUAU chl.Cor.cr 1200 UAGGAACUCCAAA---AUC(GAAA)GA|A|UCUUU-uuu|guaa---A-- chl.Cor.cr 1250 -------------------------------------------------- chl.Cor.cr 1300 ----------AAUUAACAUU|CAA-CGACGAAAGUUGGGGUAUCAAACGG chl.Cor.cr 1350 G(AUU-A-GAUAC)-CCCAAUAG-|UC-CCA-ACUGUAAACAAUUAAU-- chl.Cor.cr 1400 --AC|UA|auua---uuuu-------------------(---------uu chl.Cor.cr 1450 uau--)-------------------------------------------- chl.Cor.cr 1500 |------------------------------|--aaaa--uaaaauaugc chl.Cor.cr 1550 (uaac)gcua--AAGUAUUU|U|GCCUGAGAAGUAAAUUC(GCAA)GAAU chl.Cor.cr 1600 AAAACUCAAAGGAAUUGACGGGAAUCU-AUAAA-------AGCGAU|GGA chl.Cor.cr 1650 GUAUGUGGUUUAAUUCG-(AUGCAGAG)CGUAAAAUCUUACCAGUAUUug chl.Cor.cr 1700 aaA----UG|-uu-uua--a-------uuuuuau-----(auaa--)aaa chl.Cor.cr 1750 aa-aaa------------------(auauauaua-)-------------- chl.Cor.cr 1800 ---------------|uauauACA|C|AGGUGGUGCAUG|GCU|GUCGUC chl.Cor.cr 1850 A|-G-UUCGU|ACC(GUGA)GGCGUUAGG(UUAAUU)CCUUUAACGAACG chl.Cor.cr 1900 UAAaCCAAA|UAUUUU-U-UUUAU-------------------------- chl.Cor.cr 1950 -------------------------------------------------- chl.Cor.cr 2000 -------------------------------------------------- chl.Cor.cr 2050 -----------------------------(--acuaaaua)--------- chl.Cor.cr 2100 |AUAAAAAAUAAAAAA-UAAUAGC(GAUAA----)--------------- chl.Cor.cr 2150 ---------GCUAUAGGAAGAUAAGGAUAACGUC-AA--GUCAUUAUGCC chl.Cor.cr 2200 CCUAAUAUUCUGGGCUAC-ACACGUAGUACAAUGAA--UUAGACAAAAUU chl.Cor.cr 2250 AA----UAAAU-UC--------------------(----GUAA-)----- chl.Cor.cr 2300 --------------GAAU-AUCAUA-AC-AUAU-AAACUUAUUCUAAGUU chl.Cor.cr 2350 CAGAUUGAAGAC(--UGAAACUC)GUCUUCACGAAGUCGGAAUCGCU--- chl.Cor.cr 2400 ---AGUAA--CGUCGG(U---AAUUAU)ACGACGGUGAAUUA--uAAaaa chl.Cor.cr 2450 -----------------UUUAGAUUUUGUACACACUGCCCGUCACA-UUU chl.Cor.cr 2500 UAAAAUUG----AUGAUuauUUAAAUUu---------aga-(--uu-uuu chl.Cor.cr 2550 ugag---)-ucu--------CU-AUAA-AAUA-UAUUUUCAAAAUUAUAA chl.Cor.cr 2600 -UGAAGUCGUA~~~~~~~~~~~~~~~~(~~~~)~~~~~~~~~~~~~~~~~ chl.Cor.cr 2650 ~~~~~~~~|~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ chl.Cor.cr 2700 ~~~~~~~~~~~~~~~~| chl.C.cocc 0 |----------UCUCAUGGAGAG-UU(C-GA)UCCU|GGCUCAGGAUGAA chl.C.cocc 50 CGC-UGGCGGCAUGCUU--AACACAUGCAAGUUGUACU|GUA-------- chl.C.cocc 100 ---------ua(ua------------------a-------)ua------- chl.C.cocc 150 ----------------UAU-AGU--GGCGCACGGGUGCAUAA-CACGUAA chl.C.cocc 200 GA-ACCUAC-CCUU------------------------------------ chl.C.cocc 250 -------------------------------------------------G chl.C.cocc 300 GGA---------GGGGAACAACGU------------------------CU chl.C.cocc 350 G(GAAA)UGG-CCGAAAAUACC-CCGU-UA-------------------- chl.C.cocc 400 ------------------GCU-------(GAGG---)-------AGC--- chl.C.cocc 450 ---AAUA-----------------------GGA-------------(--- chl.C.cocc 500 -------GGAA------)---------|----UUCGCCCAAGGA-GGG|G chl.C.cocc 550 -CUCGCGU|-CUGAUUA-GCUAGUUGG-UG-AG(G-CAAUAG)-CUUACC chl.C.cocc 600 AA|GGCGAUGAU|CAGUAGCUG|GUCU(GAGA)GGAUGAUCAGC|CACAC chl.C.cocc 650 UGGGA(CUGAGACACG)GCCCAGA-C--UCC(UA-CG)GG-A--GGCAG- chl.C.cocc 700 CAGUGGGG-AAUUUUCCG-CAAU-GGGC-(-GAAA)-G-CU-GACGGA|G chl.C.cocc 750 CAAUGCCGCGUGGAGGUAAAAGGCU(---UAUG--)GG-UC--AUGAACU chl.C.cocc 800 UC|UUUU-CCCAGCGAAuaaaa--------(--------)---------a chl.C.cocc 850 ugaCG|GU-AUCU-GGAGAA-UAAGCAUC|GGCU-AACU-CUGUG(CCA- chl.C.cocc 900 -GCAGCC|GCGGU---AA-)UACAGAG|GAUGCAAGCGUUAU-CCGGAAU chl.C.cocc 950 GAUUGGGC|GUAAAGAGUCUGUAGGUG|GCUUUUUAAG-|UCC-GUCGUC chl.C.cocc 1000 AAAUCCCAGGGC(------------------------------------- chl.C.cocc 1050 ---------------------------------UCA)ACCCUGU--A-AU chl.C.cocc 1100 ACGGU--GGA-AAC-U|AUC-AA-G-CUUGAG-UA|CGUUA-----GGGG chl.C.cocc 1150 CAGAG|GGAAUUUAUGG-UGGAGCG(GUUAUA)UGUGUAGAGA---UCAG chl.C.cocc 1200 AAAGAACACCAAC---GGC(GAAA)GC|A|CUCUG-CUG|GGACG--A-- chl.C.cocc 1250 -------------------------------------------------- chl.C.cocc 1300 ----------UACUGACACU|GAG-AGACGAAAGCUAGGGGAGCAAAUGG chl.C.cocc 1350 G(AUU-A-GAUAC)-CCCGGUAG-|UC-CUA-GCCGUAAACGAUGGAU-- chl.C.cocc 1400 --AC|UA|AGCG-CUGUGU-------------------(--------auc chl.C.cocc 1450 gacc-)c------------------------------------------- chl.C.cocc 1500 |------------------------------|--GUGCAGUACU-GUAGC chl.C.cocc 1550 (UAAC)GCAU-UAAGUAUCC|C|GCCUGGGGAGUAUGUUC(GCAA)GAAU chl.C.cocc 1600 GAAACUCAAAGGAAUUGGCGGGGGCCC-GCACA-------AGCGGU|GGA chl.C.cocc 1650 GCAUGUGGUUUAAUUCG-(AUGCAAAG)CGAAGAACCUUACCAGGGCUUG chl.C.cocc 1700 ACA----UG|-CC-GCG--AA------UCCUAUC-----(GAA-A-)GAU chl.C.cocc 1750 AG-GGG---UG--CC---------(CUCG------)---------GGAA- chl.C.cocc 1800 ---------------|CGUGGACA|C|AGGUGGUGCAUG|GCU|GUCGUC chl.C.cocc 1850 A|-G-CUCGU|GCC(GUAA)GGUGUUGGG(UUAAGU)CCCCUAACGAGCG chl.C.cocc 1900 CAACCCUCA|UGUUUA-G-UUGCC-------------------------- chl.C.cocc 1950 -------------------------------------------------- chl.C.cocc 2000 -------------------------------------------------- chl.C.cocc 2050 -----------------------------(---auaua--)--------- chl.C.cocc 2100 |GGAACUCUGAGCAGACUGCCGGU(UAUAA----)--------------- chl.C.cocc 2150 ---------GCCGGAGGAGGGUGAGGAUGACGUC-AA--GUCAUCAUGCC chl.C.cocc 2200 CCUUAUGCCCUGGGCGAC-ACACGUGCUACAAUGGU--CGGGACAAAGGG chl.C.cocc 2250 CC----GCAAUACC--------------------(----GCGA-)----- chl.C.cocc 2300 --------------GGGC-GAGCUAACC-CCAA-AAACCCUUCCUCAGUU chl.C.cocc 2350 CGGAUUGAAGGC(--UGCAACUC)GCCUACAUGAAGUAGGAAUCGCU--- chl.C.cocc 2400 ---AGUAAU-CGCCGG(UC--AGCCAU)ACGGCGGUGAAUUU--GUU--- chl.C.cocc 2450 -----------------CCCGGGCCUUGUACACACUGCCCGUCACACUAU chl.C.cocc 2500 GGGAGCUGG-GCAUACCCGAA---AUU---ACCUU-AACU-(--ac-aau chl.C.cocc 2550 uuua---)-AGuAGG-GGG-AU-GACG-AAGG-UAGGACUAGUGACUAGA chl.C.cocc 2600 GUGAAGUCGUAACAAGGUAGCCGUACU(GGAA)GGUGCGGCUGGAUCACC chl.C.cocc 2650 UCCUUU--|~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ chl.C.cocc 2700 ~~~~~~~~~~~~~~~~| chl.C.rube 0 |----------UCUCAUGGAGAG-UU(C-GA)UCCU|GGCUCAGGAUGAA chl.C.rube 50 CGC-UGGUGGCAUGCUU--AACACAUGCAAGUUGAACG|UAA-------- chl.C.rube 100 ---------aa(ug------------------guc-----)uu------- chl.C.rube 150 ----------------UUA-AGU--GGCGAACGGGUGAGUAA-CGCGUAA chl.C.rube 200 GA-AUCUGU-CCUU------------------------------------ chl.C.rube 250 -------------------------------------------------G chl.C.rube 300 GGA---------GGGGAACAACAG------------------------UU chl.C.rube 350 G(GAAA)CGU-CUGCUAAUACC-CCAU-AG-------------------- chl.C.rube 400 ------------------ACU-------(GAGG---)-------AGU--- chl.C.rube 450 ---AAAA-----------------------GGA-------------(--- chl.C.rube 500 -----G-GAAA------)---------|----UCCGCCCAAGUA-GGA|G chl.C.rube 550 -CUUGCGU|-CUGAUUA-GCUAGUUGG-UG-AG(G-AAAUAG)-CUUACC chl.C.rube 600 AA|GGCAAUAAU|CAGUAGCUG|GUCC(GAGA)GGAUGAUCAGC|CACAC chl.C.rube 650 UGGGA(CUGAGACACG)GCCCAGA-C--UCU(UA-CG)GG-A--GGCAG- chl.C.rube 700 CAGUGGGG-AAUUUUCCG-CAAU-GGGC-(-UAAA)-G-CU-GACGGA|G chl.C.rube 750 CAAUGCCACGUGAAGGUAAAAGGCC(---CCUG--)GG-UC--AUGAACU chl.C.rube 800 UC|UUUU-ACCAGAgaauaaagc-------(--------)--------aa chl.C.rube 850 ugaCG|GU-AUCU-GGUGAA-UAAGCAUC|GGCU-AACU-CUGUG(CCA- chl.C.rube 900 -GCAGCC|GCGGA---AA-)UACAGAG|GAUGCAAGCGUUAU-CCGGAAU chl.C.rube 950 UAUUGGGC|GUAAAGCGUCUGUAGAUG|GCUUUUUAAG-|UCU-GCCAUA chl.C.rube 1000 AAAUCCCAGGGC(------------------------------------- chl.C.rube 1050 ---------------------------------UCA)ACCCUGU-AC-AG chl.C.rube 1100 GUGGU--AGA-AAC-U|AUA-AA-GACUUGAG-UU|UGGUA-----GGGG chl.C.rube 1150 CAGAG|GGAAUUUUCGG-UGGAGCG(AUAAAA)UGCAUAGAGA---UCGG chl.C.rube 1200 AAAGAACACCAAU---GGC(GAAG)GC|A|CUCUG-CUG|GGCCA--A-- chl.C.rube 1250 -------------------------------------------------- chl.C.rube 1300 ----------UACUGACAUU|GAG-AGACUAAAGCUAGGGGAGCAAAUGG chl.C.rube 1350 G(AUU-A-GGUAC)-CCCAGUAG-|UC-CUA-GCCAUAAACGAUGGAU-- chl.C.rube 1400 --AC|CA|AGUG-CUGUGUG------------------(-------aauc chl.C.rube 1450 gauc-)-------------------------------------------- chl.C.rube 1500 |------------------------------|-CAUGCAGUGCU-CUAGC chl.C.rube 1550 (AAAC)GCGU-UAAGUAUCC|C|GCCUGGGGAGUACGUUC(GCAA)GAAU chl.C.rube 1600 GAAACUCAAAGGAAUUGACGUGGGCCC-GCACA-------AGCGAU|GGA chl.C.rube 1650 GCAUGUCGUUUAAUUCG-(AUGCAAAG)CGAAGAACCUUACCAGGGCUUG chl.C.rube 1700 UUA----UG|-CC-GCG--AA------UACUCUU-----(GAA-A-)GAG chl.C.rube 1750 AG-GAG---UG--CC---------(CUAG------)---------GGAA- chl.C.rube 1800 ---------------|CGCGGACA|C|AGGUGGUGCAUG|GCU|GUCGUC chl.C.rube 1850 A|-G-CUCGU|GCC(GUAA)GGUGUUGGG(UUAAGU)CCCAUAACGAGCG chl.C.rube 1900 CAACCCUCG|UGUUUA-G-UUGCC---AAuac------------------ chl.C.rube 1950 -------------------------------------------------- chl.C.rube 2000 -------------------------------------------------- chl.C.rube 2050 -----------------------------(---uua----)--gu---UU chl.C.rube 2100 |GGAACUCUAAACAUACUGCCGGU(GUUAA----)--------------- chl.C.rube 2150 ---------GUCGGAGGAAGGUGAGGAUGACGUC-AA--GUCAUCAUGCC chl.C.rube 2200 CCUUAUGCCCUGGGCUAC-ACACAUGCUACAAUGGA--CAGGACAAAGGA chl.C.rube 2250 UU----GUAAGUCC--------------------(----GCGA-)----- chl.C.rube 2300 --------------GGUU-UAGAUAACU-CCAA-AAACCUGUCCUCAGUU chl.C.rube 2350 CGGAUUGCAGGC(--UGCAACUC)GCCUGCAUGAAGCCGGAAUCGCU--- chl.C.rube 2400 ---AGUAAU-CGCCGG(UC--AGCCAU)ACGGCGGUGAAUUA--GUU--- chl.C.rube 2450 -----------------CUCGGGCCUUGUACACACCGCCCGUCACACUAA chl.C.rube 2500 AAGAGCUGG-CUUUGUCCUAAGUCAUUUUUACCUU-AACC-(---a-caa chl.C.rube 2550 a------)-GG-AGG-GGG-AU-GCCA-AAGG-CAGGGCUAGUGAUUGGA chl.C.rube 2600 GUGAAGUCGUAACAAGGUAGCCGUACU(GGAA)GGUGCGGCUGGAUCACC chl.C.rube 2650 UCCUUU--|~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ chl.C.rube 2700 ~~~~~~~~~~~~~~~~| chl.H.afri 0 |----------UCUCAUGGAGAG-UU(C-GA)UCCU|GGCUCAGGAUGAA chl.H.afri 50 CGC-UGGCGGCAUGCUU--AACACAUGCAAGUUGAACG|AGA-------- chl.H.afri 100 ------aauag(aa------------------caa-----)cuauu---- chl.H.afri 150 ----------------UCU-AGU--AGCGAACGGGUGCGUAAUUACAUAA chl.H.afri 200 GA-ACUUAU-CCUU------------------------------------ chl.H.afri 250 -------------------------------------------------U chl.H.afri 300 UAagaaggaaauaacaaAUAACAA------------------------au chl.H.afri 350 g(GAAA)cau-UUGCUAAUGUC-CUAU-AA-------------------- chl.H.afri 400 ------------------GCU-------(GAAA---)-------AGU--- chl.H.afri 450 ---AAAA-----------------------GGA-------------(--- chl.H.afri 500 -----u-uaaa------)---------|----UCCACUAAAGGU-AAG|G chl.H.afri 550 -CUUAUGU|-C----UA-GUUAGUUGG-UA-AG(G-UAACAG)-CUUAAC chl.H.afri 600 AA|GACAAUGAU|CAGUAAUUG|GUCU(GAGA)GGAUGAUCAAU|CACAC chl.H.afri 650 UGGAA(CUGAGAUAAG)GUCCAGA-C--UCC(UA-CG)GG-U--GGCAG- chl.H.afri 700 CAGUGGGG-AAUUUUCCG-CAAU-GGGC-(-GAAA)-G-CU-GACGGG|G chl.H.afri 750 CAAUGUUGCGUGAAGGCAGAAGGCC(---GAUA--)GG-UU--GUAAACU chl.H.afri 800 UC|UUUU-GUGAGAAAAuaagga-------(--------)-------aaa chl.H.afri 850 ugaCA|GU-AUCU-CAAGAA-UAAGCAUC|GGCU-AACU-UUGUG(CCA- chl.H.afri 900 -GCAGCC|GCGGU---GA-)UACAGAG|GAUGCGAGCAUUAU-CCGGAAU chl.H.afri 950 UAUUGGGC|GUAAAGUGUUUUAAGGUG|GCUUUAUAAG-|UCU-AUCGUU chl.H.afri 1000 AAAUCUCAGAGC(------------------------------------- chl.H.afri 1050 ---------------------------------UUA)ACUCUGA-UU-AG chl.H.afri 1100 GCGAU--UGA---C-U|AUU-AA-G-CUAGAGCUU|UGAAU-----AAAG chl.H.afri 1150 CAAGG|GGAAUUUCUAA-UGAAGCG(GUUAAA)UGCGUUGAGA---UUGG chl.H.afri 1200 AAAGAACACCAAG---GGC(GAAA)GC|A|CUCUG-CUG|GGCCA--A-- chl.H.afri 1250 -------------------------------------------------- chl.H.afri 1300 ----------AAUUGACACU|GAU-AAACGAAAGCUAGGGUAGCGAGAGG chl.H.afri 1350 G(AUU-A-GACAC)-CCCAAUAG-|UC-CUA-GCUGUAAACAAUGGAU-- chl.H.afri 1400 --AC|UU|AGC-AUUACUAU------------------(-------auga chl.H.afri 1450 aaag-)-------------------------------------------- chl.H.afri 1500 |------------------------------|-AUAGCUAAGCUuAAAGC chl.H.afri 1550 (UAAC)GCAA-UAAGUAUCC|C|GCCUGGGAAGUACGUUC(GCAA)GAAU chl.H.afri 1600 GAAACUCAAAGGAAUUGGCGGGGGUUC-ACGCA-------AGCGGU|GGA chl.H.afri 1650 GCAUGUGGUUUAAUUCG-(AUGCAAAG)CGAAGAACCUUACCAGGGAUUG chl.H.afri 1700 U-A----UG|-UC--GU--AA------UCUUUCU-----(GAAAA-)AGU chl.H.afri 1750 AA-GA----ua--cguauuuauuu(-aau------)aaauaaauacgua- chl.H.afri 1800 ---------------|---GA-CA|C|AGGUGGUGCAUG|GCU|GUCGUC chl.H.afri 1850 A|-G-CCCGU|GCU(GUCA)AGCGUAGGG(UUAACU)CCCAUAACGGGCG chl.H.afri 1900 CAACUCCCA|UGUUUA-G-UUACC-------------------------- chl.H.afri 1950 -------------------------------------------------- chl.H.afri 2000 -------------------------------------------------- chl.H.afri 2050 -----------------------------(--aauuuau-)--------- chl.H.afri 2100 |GGUACUCUAAACAAACAGCUAAU(GAUAA----)--------------- chl.H.afri 2150 --auacuaaAUUAGAGGAAGGUGGGGAAGACGUC-AA--GUCAUCAUGCC chl.H.afri 2200 CUUUAUACUCUGGGCUAC-ACGCGUGCUACAAUGGC--UGGGACAAAAUG chl.H.afri 2250 UU----GCAAUUCU--------------------(----GUAA-)----- chl.H.afri 2300 --------------AGAUAUAGCAAAAC-AUAA--AACCCAGUCUCAGUU chl.H.afri 2350 CGGAUU-CGGGC(--UGCAACUC)GCCCGCAUGAAGUCGGAAUCGCU--- chl.H.afri 2400 ---AGUAAU-CGCUGG(UC--AGCAAU)ACAGCGGUGAAUAA--GUC--- chl.H.afri 2450 -----------------ACCGGACCUUGUACACACCGCCCGUCACACUCA chl.H.afri 2500 GGAAAUUGG-UCAUGCCcuaacucauu--------------(--uu-aau chl.H.afri 2550 au-----)----------a-au-gaua-aagg-ugaGGCUGGUAACUAGA chl.H.afri 2600 GUGAAGUCGUAACAAGGUAGCCGUACU(GGAA)GGUGCGGCUGGAUCACC chl.H.afri 2650 UCCUUU--|~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ chl.H.afri 2700 ~~~~~~~~~~~~~~~~| chl.M.yama 0 |----------UCUCAUGGAGAG-UU(C-GA)UCCU|GGCUCAGGAUGAC chl.M.yama 50 UGG-CGGCUGUAUGCUU--AACACAUGCAAGUCUUACU|AUA-------- chl.M.yama 100 -----------(aa------------------ac------)--------- chl.M.yama 150 ----------------UUU-AGU--GGCGAACGGGUGAGUGA-CGCGUAA chl.M.yama 200 GA-AUCUGC-CCCU------------------------------------ chl.M.yama 250 -------------------------------------------------U chl.M.yama 300 UAG------------AAguaACGA------------------------UG chl.M.yama 350 G(GAAA)CUA-UUGCUAAUAUC-CCAU-AG-------------------- chl.M.yama 400 ------------------GCU-------(GAAG---)-------AGU--- chl.M.yama 450 ---UAAA-----------------------AGAA------------(--- chl.M.yama 500 -------gaa-------)---------|---UUCUCUACAGGGA-AGA|G chl.M.yama 550 -CUUACGU|-CUGAUUA-GCUAGUUGG-UA-CG(A-UAAUAG)-CUUACC chl.M.yama 600 AA|GGCUGUGAU|CAGGAGCUA|GUUC(GAGA)GGAUGAUCAGC|CACAC chl.M.yama 650 UGGAA(CUGAGACAAG)GUCCAGA-C--UCC(UA-UG)GG-A--GGCAG- chl.M.yama 700 CAGUGGGG-AAUUUUCCG-CAAU-GGGC-(-GAAA)-G-CU-GACGGG|G chl.M.yama 750 CAAUACCGCGUGAAGGUAGAAGGCC(---UACG--)GG-UC--GUAAACU chl.M.yama 800 UC|UUUU-ACCAAAAAAgaacua-------(--------)---------- chl.M.yama 850 --aCA|GU-AUUU-GGGGAA-UAAGCAUC|GGCU-AACU-UUGUG(CCA- chl.M.yama 900 -GCAGCC|GCGGU---AA-)UACAGAG|GAUGCAAGCGUUAU-CCGGAAU chl.M.yama 950 GAUUGGGC|GUAAAGAGUCUGUAGGUG|GCUUUUUAAG-|UCU-GCUGUC chl.M.yama 1000 AAAUACCUAGGC(------------------------------------- chl.M.yama 1050 ---------------------------------UCA)ACCCGGG-GA-AG chl.M.yama 1100 GCAAC--AGU-GAC-U|AAA-AA-G-CUUGAG-UA|UGAUA-----AGGG chl.M.yama 1150 AAGAG|GGAAUUUCUGA-AGGAGCG(AUGAAA)UGCAUAGAUA---UCAG chl.M.yama 1200 AAAGAACGCCGAA---GGU(GAAA)AC|G|CUCUU-CUG|UAUUU-ga-- chl.M.yama 1250 -------------------------------------------------- chl.M.yama 1300 ----------UACUGACAUU|GAG-AGACGAAAGCUAGGGGAGCGAAUGG chl.M.yama 1350 G(AUU-A-GAGAC)-CCCAGUAG-|UC-CUA-GCUGUAAACGAUGGAUgg chl.M.yama 1400 auAC|UA|AGUA-UUGUAUG------------------(--------uuu chl.M.yama 1450 gauc-)-------------------------------------------- chl.M.yama 1500 |------------------------------|-CAUUCAGUACU-ACAAC chl.M.yama 1550 (UAAC)GUGU-UAAGUAUCC|C|GCCUGGGGAGUACGUUC(GCAA)GAAU chl.M.yama 1600 GAAACUCAAAGGAAUUGACGGGGGCUC-GCACA-------AGCGGU|GGA chl.M.yama 1650 GCAUGUGGUUUAAUUCG-(AUGCAAAG)CGAAGAACCUUACCAGGGCUUG chl.M.yama 1700 ACga---UG|aUCcGCG--AA------UCUUUUU-----(GAA-A-)AUU chl.M.yama 1750 AA-GAG---UG--CC---------(UUAG------)---------GGAA- chl.M.yama 1800 ---------------|UGCGAACA|C|AGGUGGUGCAUG|GCU|GUCGUC chl.M.yama 1850 A|-G-CUCGU|GCC(GUCA)GGUGUUGUG(UUAAGU)CCCGCAACGAGCG chl.M.yama 1900 CAACCCUUA|UAUUUA-G-UUACC-------------------------- chl.M.yama 1950 -------------------------------------------------- chl.M.yama 2000 -------------------------------------------------- chl.M.yama 2050 -----------------------------(--uuguuu--)--------- chl.M.yama 2100 |GGAACUCUAAAUAAACAGCUGGA(AAUAA----)--------------- chl.M.yama 2150 ---------UCUAGAGGAAGGAGAGGAUUACGUC-AA--GUCAUCAUGCC chl.M.yama 2200 CCUUAUGCCCUGGGCAAC-ACACGUGCUACAAUGGU--CGGGACAAAGAA chl.M.yama 2250 uaauuuGUGAACUU--------------------(----GCAA-)----- chl.M.yama 2300 --------------GAGU-GAACUAAUU-UCAA--AACCCGAUCACAGUU chl.M.yama 2350 CGAAUUGUAGGC(--UGAAACUC)GCCUACAUGAAGCCGAAAUCGCU--- chl.M.yama 2400 ---AGUAAU-CGCCGG(UC--AGCUAU)ACGGCGGUGAAUAU--GUU--- chl.M.yama 2450 -----------------ACCGGGCCUUGUACACACCGCCCGUCACACUCU chl.M.yama 2500 GGAAGUUGU-CCCUGUUCUAAauca----------------(---a-aaa chl.M.yama 2550 a------)-------------u-gacu-AAAA-UAGAGUUAAUGACUAGA chl.M.yama 2600 GUGAAGUCGUAACAAGGUAGCCGUACU(GGAA)GGUGCGGCUGGAUCACC chl.M.yama 2650 UCCUUU--|~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ chl.M.yama 2700 ~~~~~~~~~~~~~~~~| chl.Bda.am 0 |----------NNNNNNNNNNNN-NN(C-GA)UCCU|GGCUCAGGAUGAA chl.Bda.am 50 CGC-UAGCAGCAUGCUU--AACACAUGCAAGUUGUACG|GUA-------- chl.Bda.am 100 ---------ag(ug------------------uug-----)uu------- chl.Bda.am 150 ----------------UAC-AGU--GGCGAACGGGUGAGUAA-CACGUAA chl.Bda.am 200 GA-AUAUAA-UCUU------------------------------------ chl.Bda.am 250 -------------------------------------------------A chl.Bda.am 300 GGA---------GGGGAAAUACUA------------------------CU chl.Bda.am 350 U(GGAA)CAA-UUGCUAAUAUC-CCAU-UUaauuuauua----------- chl.Bda.am 400 -------g----------GCU-------(GAGG---)-------AGC--- chl.Bda.am 450 ---AAAA-----------------------GGAAU-----------(--- chl.Bda.am 500 auaaau-aaaa------)---------|--ACAUCgCCUAAGGA-GUA|G chl.Bda.am 550 -CUUACGU|-CUGAUUA-GCUAGUUGG-UA-AG(G-UAAUAG)-CUUACC chl.Bda.am 600 AA|GGCUAUUAU|CAGUAGCUG|GUUC(GAGA)GGACGAUCAGC|CACAC chl.Bda.am 650 UGGGA(CUGAGAUAUG)NNNCAGA-C--UCU(UA-CG)GG-A--GGCAG- chl.Bda.am 700 CAGUGGGG-AAUUUUCCG-CAAU-GGGU-(-GAAA)-ACCU-GACGGA|G chl.Bda.am 750 CAAUGCCGCGUGAAGGUAAAAGGCC(---UAUG--)AG-UC--AUAAACU chl.Bda.am 800 UC|UUUU-AUUAGUAUAAaa----------(--------)--------ua chl.Bda.am 850 ugaUA|GU-AUCU-AAGGAA-UAAGCAUC|GGCU-AAUU-CUGUG(CCA- chl.Bda.am 900 -GCAGCC|GCGGU---AA-)UACAGAA|GAUGCAAGCGUUAU-CUGGAAU chl.Bda.am 950 UAUUGGGC|GUAAAGCGUCUAUAGGUG|GCUUUUUAAG-|UCC-AACGUU chl.Bda.am 1000 AAAUAACAGGGC(------------------------------------- chl.Bda.am 1050 ---------------------------------UUA)ACCCUGU-GC-AG chl.Bda.am 1100 GCGGUu-GGA-AAC-U|ACU-AG-AgCUGGAG-UA|UGGUA-----GGGG chl.Bda.am 1150 CAGAG|GGAAUUUUUGG-UGUAGCG(GUGAAA)UGCGUAGAGA---UCUU chl.Bda.am 1200 AAAGAACACCAAG---GGC(AAAA)GC|A|CUCUG-UUG|GGCCU--A-- chl.Bda.am 1250 -------------------------------------------------- chl.Bda.am 1300 ----------UACUGACACU|GAU-AGACGAAAGCUAGGGUAGCAAAUGG chl.Bda.am 1350 G(AUU-A-GAUAC)-CUCAGUAG-|UC-UUA-GCUGUAAACUAUGGAU-- chl.Bda.am 1400 --AC|UA|AGCG-UUGUUCGuauga-------------(-------acuc chl.Bda.am 1450 gacc-)-------------------------------------------- chl.Bda.am 1500 |------------------------------|-CGUGCAGUGCU-GUAGC chl.Bda.am 1550 (UAAC)GCAU-UAAGUAUCC|C|GCCUGGGGAGUAUGUUC(GCAA)GAAU chl.Bda.am 1600 AAAACUCAAAGGAAUUGACGGGGGCUC-GCACA-------AGCGGU|GGA chl.Bda.am 1650 GCAUGUGGUUUAAUUCG-(AUGCAAAG)CGAAGAACCUUACCAGGGCUUG chl.Bda.am 1700 g-ACA--UG|-CC-ACG--AA------UCUUCUA-----(GAA-A-)UGG chl.Bda.am 1750 AG-GAG---UG--CC---------(uugAa----u)---------GGAA- chl.Bda.am 1800 ---------------|CGUGGACA|C|AGGUGGUGCAUG|GCU|GUCGUC chl.Bda.am 1850 A|-G-CUCGU|GCC(GUAA)GGUGUUGGG(UUAAGU)CUCGCAACGAGCG chl.Bda.am 1900 CAACCCUCA|UGUUUA-G-UUGCC-------------------------- chl.Bda.am 1950 -------------------------------------------------- chl.Bda.am 2000 -------------------------------------------------- chl.Bda.am 2050 -----------------------------(auugucaguu)--------- chl.Bda.am 2100 |GGAACUCUGAACAGACUGCUGAU(UAUAA----)--------------- chl.Bda.am 2150 ---------GUUAGAGUAAGGUGAGGAGGAUGUC-AAcuGUCAUCAUGCC chl.Bda.am 2200 CUUUAUGCCCUGGGCGAC-ACACGUGCUACAAUGGA--CGGUACAAAGGA chl.Bda.am 2250 au---uGAAACCUC--------------------(----GCGA-)----- chl.Bda.am 2300 --------------GGGU-AAGCCAACU-CCAA-AAAACCGUCCUUAGUU chl.Bda.am 2350 CGGAUUGCAGGC(--UGCAACUC)GCCUGCAUGAAGUCGGAAUCGCU--- chl.Bda.am 2400 ---AGUAAU-CGCAGG(UC--AGCCAU)ACUGCGGUGAAUUC--GUU--- chl.Bda.am 2450 -----------------CCCGGGCCUUGUACACACUGCCCGUCACACUAU chl.Bda.am 2500 GGAAAUUAG-UUAUGUCCGAAGUCAUU-UUACCUU-AA-U-(---a-uaa chl.Bda.am 2550 gg-----)-G--AGG-GGU-AU-GCCU-AAGG-CAGGACUAAUGAUUGAA chl.Bda.am 2600 GUGAAGUCGUAACAA~~~~~~~~~~~~(~~~~)~~~~~~~~~~~~~~~~~ chl.Bda.am 2650 ~~~~~~~-|~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ chl.Bda.am 2700 ~~~~~~~~~~~~~~~~| chl.Pil.th 0 |----------nnnnnnnnnnnn-nn(n-nn)nnnn|nnnnnnnnnnnnn chl.Pil.th 50 nnn-nnnnnnnnnnnnn--nACACAUGCAAGUUUUACU|uu--------u chl.Pil.th 100 auc-uaacacu(uu------------------uuuauu-u)gguguuu-- chl.Pil.th 150 -ugauaauaaauu----aa-AGUAAGGCGAACGGGUGAGUAA-UAUAUAA chl.Pil.th 200 GA-AUCUAC-cauu------------------------------------ chl.Pil.th 250 ------------------------------------------------cA chl.Pil.th 300 AUu----------------------------------------------- chl.Pil.th 350 -(----)------------------------------------------- chl.Pil.th 400 ----------------------------(-------)------------- chl.Pil.th 450 ----------------------------------------------(--- chl.Pil.th 500 -----u-uuau------)---------|-------aAUUaaugA-UGA|G chl.Pil.th 550 -CUUAUAU|-CUAAUUA-GUUUGUUGG-CG-GG(G-UAA-GG)-CCUACC chl.Pil.th 600 AA|GACUUUGAU|UAGUAGUUG|GUUU(GGAA)GAAUGAUCAGC|CACAC chl.Pil.th 650 UAGGA(CUGAAACAAG)GCCUAGA-CUAAUU(UU-UU)AA-UUAGuCAG- chl.Pil.th 700 CAGUGGGG-GAUAUUCUG-CAAU-GGGCA(auaag)UGCCU-GACAGA|G chl.Pil.th 750 UAAUAUCGAGUuaa--------cuc(---AAAU--)ga-gu--------u chl.Pil.th 800 ua|uuuc-uuaaaagauuaau---------(--------)--------ua chl.Pil.th 850 agaaG|GU-Auuu-uaagaa--AAGUAUU|GGCU-AACUcCUGUG(CCA- chl.Pil.th 900 -GCAGCC|GCGGU---AA-)UACAGGG|AAUGCAAGCGUUAU-UCGGUUU chl.Pil.th 950 AAUUAGGU|GUAAAAGGUUguUAGGCu|UUUCGUUAAG-|UG-------- chl.Pil.th 1000 ------------(uuuuguuaaaguccaaaauuauuuaaccauuccuuaa chl.Pil.th 1050 uuauaaauuuuauaguuuuuuuggggugcauuu---)------------- chl.Pil.th 1100 --------ca-uac-u|aac-ag-A-AUGGAG-UA|UUAAAcacaaAAGA chl.Pil.th 1150 UAGAU|AGAACCUUAUGAUGAA-CA(AUUAAA)UG-UUUUAAA---UAUA chl.Pil.th 1200 AGGGACUGCCAAU---GGU(GAAG)AC|A|AUCUA-UUA|UGUUA--A-- chl.Pil.th 1250 -------------------------------------------------- chl.Pil.th 1300 ----------UACUGACGCU|GAGucaACGAAAGC-acGGGAG-AAAUGG chl.Pil.th 1350 G(AUUuA-GAGAC)-CCCAGUAA-|UC-GUAuGCUGUAAAUUUUGAAU-- chl.Pil.th 1400 --AC|UA|GGCU-AUAAAcaaaAGAAGAcuuuacuGGuu-------(cca chl.Pil.th 1450 uu)a-acucaguuuauuGGaaugcaaguuuUCuuuuCCuuuUUUUUUUaa chl.Pil.th 1500 |uauauauuaauauuuuauauauaguauaua|uuuUUUGUGGCC-ACAGU chl.Pil.th 1550 (UAAC)ACGUuUAAGUAUUG|U|ACCUGGAAAGUACGUCC(GCAA)GGAU chl.Pil.th 1600 GAAAUUCAAAGGAAUUGGCGUGAAUCU-UUACAuuuuuacAACGAU|GGA chl.Pil.th 1650 GCAUGUGGUUUAAUUCG-(ACAAAGAG)CGAAAAACAUUAUCAAGGUUUA chl.Pil.th 1700 AC-------|-----------------------------(------)--- chl.Pil.th 1750 ------------------------(----------)-------------- chl.Pil.th 1800 ---------------|--------|-|-GGUGGUGCAUG|GCU|GUua-- chl.Pil.th 1850 -|----UCGU|GCU(GUGA)AGUGUCAGG(UUAAGU)CCUGuaACGAGCG chl.Pil.th 1900 CAACCCUUA|guaauuug-uuguu---uaauu------------------ chl.Pil.th 1950 -------------------------------------------------- chl.Pil.th 2000 -------------------------------------------------- chl.Pil.th 2050 -----------------------------(---aua----)--aa--uaa chl.Pil.th 2100 |agaacu-aauuauGACUucuuaa(uaauacaua)--------------- chl.Pil.th 2150 ---------aaaagAGGAA-G-AAGGACAAAAAC-AA--GuaaaCUUGCC chl.Pil.th 2200 CC-uauACUUUGAGCAAC-ACGCGUGCUACAAUGGA-AAAUAACAAAg-- chl.Pil.th 2250 ----------------------------------(u-uuuauu-)----- chl.Pil.th 2300 ------------------------------cuu-AAAUAUUUCCUCAGUU chl.Pil.th 2350 CGGAUUGUAuau(ggauuaaaau)GCCUACAUGAAGUUGAAAUCGUAuuu chl.Pil.th 2400 ugaAGUAAU-CGUaa-(aa--AGgucc)-uuACGGUGAAgauuuGUUuua chl.Pil.th 2450 aauuuuuuuuuauuucguaAAGGUUUCGUACAUACUGCCCGUCACGUUCC chl.Pil.th 2500 GAugauuac-guuuuacuuaaaguuuuu----------CC-(-----uaa chl.Pil.th 2550 -------)-GG-A-----a-ag-auga-augu-aaaauu--guCAUUGUA chl.Pil.th 2600 AUGAAGUCGUAACAAGGUAGCUGUGUC(GGAA)GGUGCGGnnnnnnnnnn chl.Pil.th 2650 nnnnnn--|~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ chl.Pil.th 2700 ~~~~~~~~~~~~~~~~| (3)-strame 0 | (3)-strame 23 - (3)-strame 85 -- (3)-strame 88 - (3)-strame 103 --------------------------------------------- (3)-strame 148 - (3)-strame 156 --------- (3)-strame 173 -- (3)-strame 178 ------------------- (3)-strame 297 -- (3)-strame 303 --------- (3)-strame 316 -------- (3)-strame 324 --------- (3)-strame 345 --- (3)-strame 354 -- (3)-strame 360 - (3)-strame 371 - (3)-strame 375 - (3)-strame 378 - (3)-strame 380 --------------------------- (3)-strame 412 - (3)-strame 422 ---- (3)-strame 426 -- (3)-strame 438 ------ (3)-strame 462 ------------------ (3)-strame 491 - (3)-strame 494 - (3)-strame 499 - (3)-strame 507 -- (3)-strame 538 - (3)-strame 544 - (3)-strame 550 - (3)-strame 569 -- (3)-strame 581 - (3)-strame 585 - (3)-strame 606 ----- (3)-strame 612 - (3)-strame 618 | (3)-strame 633 | (3)-strame 639 | (3)-strame 643 -- (3)-strame 666 - (3)-strame 677 - (3)-strame 680 | (3)-strame 684 - (3)-strame 690 - (3)-strame 692 -- (3)-strame 698 --- (3)-strame 715 - (3)-strame 718 - (3)-strame 730 - (3)-strame 734 -------------------------------------- (3)-strame 772 ---------------------- (3)-strame 805 ------- (3)-strame 822 - (3)-strame 828 - (3)-strame 830 | (3)-strame 833 ----- (3)-strame 841 ------------- (3)-strame 854 -- (3)-strame 866 - (3)-strame 889 - (3)-strame 899 --- (3)-strame 907 - (3)-strame 913 --- (3)-strame 918 -| (3)-strame 926 | (3)-strame 931 - (3)-strame 942 - (3)-strame 958 | (3)-strame 988 - (3)-strame 990 | (3)-strame 993 - (3)-strame 1074 --------- (3)-strame 1086 - (3)-strame 1089 - (3)-strame 1097 - (3)-strame 1099 | (3)-strame 1105 --- (3)-strame 1116 - (3)-strame 1120 - (3)-strame 1123 - (3)-strame 1125 ---- (3)-strame 1131 |- (3)-strame 1142 ---- (3)-strame 1164 - (3)-strame 1165 ------ (3)-strame 1177 - (3)-strame 1183 -------------------------------------|----- (3)-strame 1226 -------------- (3)-strame 1243 - (3)-strame 1245 -- (3)-strame 1299 ----------- (3)-strame 1314 - (3)-strame 1320 - (3)-strame 1325 | (3)-strame 1355 - (3)-strame 1361 ------- (3)-strame 1371 | (3)-strame 1373 -- (3)-strame 1383 - (3)-strame 1387 - (3)-strame 1398 ---- (3)-strame 1404 - (3)-strame 1412 - (3)-strame 1415 - (3)-strame 1421 - (3)-strame 1427 --------------------- (3)-strame 1452 --- (3)-strame 1464 -- (3)-strame 1467 -- (3)-strame 1474 ---- (3)-strame 1479 -- (3)-strame 1483 -- (3)-strame 1487 ------------ (3)-strame 1499 --------------------------------- (3)-strame 1536 ------------ (3)-strame 1560 - (3)-strame 1565 | (3)-strame 1572 | (3)-strame 1575 - (3)-strame 1595 - (3)-strame 1626 - (3)-strame 1646 - (3)-strame 1675 ------ (3)-strame 1682 ------- (3)-strame 1704 --- (3)-strame 1709 | (3)-strame 1713 - (3)-strame 1721 ------ (3)-strame 1736 --- (3)-strame 1743 - (3)-strame 1752 - (3)-strame 1767 ------- (3)-strame 1777 --------- (3)-strame 1787 --- (3)-strame 1790 ----- (3)-strame 1802 ------------- (3)-strame 1821 -- (3)-strame 1824 | (3)-strame 1832 --- (3)-strame 1842 ---------- (3)-strame 1865 -- (3)-strame 1868 -- (3)-strame 1871 -- (3)-strame 1883 ---------- (3)-strame 1893 ------ (3)-strame 1901 - (3)-strame 1916 - (3)-strame 1924 - (3)-strame 1937 - (3)-strame 1939 -- (3)-strame 1959 -------------------------------------- (3)-strame 1997 -------------------------------------------------- (3)-strame 2047 -------------------------------- (3)-strame 2087 --- (3)-strame 2093 -- (3)-strame 2114 ||| (3)-strame 2130 ---- (3)-strame 2136 ------ (3)-strame 2142 - (3)-strame 2153 ------ (3)-strame 2187 -- (3)-strame 2218 - (3)-strame 2237 - (3)-strame 2253 --- (3)-strame 2264 -------------------- (3)-strame 2285 ---- (3)-strame 2293 - (3)-strame 2328 - (3)-strame 2363 -- (3)-strame 2397 ------ (3)-strame 2420 - (3)-strame 2443 - (3)-strame 2448 ------------------- (3)-strame 2527 --- (3)-strame 2561 - (3)-strame 2577 - (3)-strame 2582 - (3)-strame 2657 - (3)-strame 2716 | chl.O.si.1 0 |---------nnUAUUAAGAGAG-UU(U-GA)UCCU|GGCUCAGGAUGAA chl.O.si.1 50 CGC-UGGCGGUAUGCCU--AACACAUGCAAGUCGUACG|AGA-------- chl.O.si.1 100 --------guu(uu------------------u-------)aac------ chl.O.si.1 150 ----------------UCA-AGU--GGCGGACGGGUGAGUAA-CACGUGA chl.O.si.1 200 GA-AUCUGC-CUUU------------------------------------ chl.O.si.1 250 -------------------------------------------------A chl.O.si.1 300 GGA---------GGGGGACAACAA------------------------CU chl.O.si.1 350 G(GAAA)CGG-UUGCUAAUACC-CCAU-AU-------------------- chl.O.si.1 400 ------------------GCU-------(uucg---)-------AGU--- chl.O.si.1 450 ---GAAAU----------------------AGA-------------(--- chl.O.si.1 500 ----uu-ua--------)---------|----UCUGCCUAAAGA-GGA|G chl.O.si.1 550 -CUCGCGG|-CUGAUUA-GCUUGUUGG-UA-AG(G-UAAUGG)-CUUACC chl.O.si.1 600 AA|GGCGACGAU|CAGUAUCUG|GUUU(GAGA)GGACGAUCAGA|CACAC chl.O.si.1 650 UGGAA(CUGAGACACG)GUCCAGA-C--UCC(UA-CG)GG-A--GGCAG- chl.O.si.1 700 CAGUGGGG-AAUUUUCCG-CAAU-GGGC-(-GAAA)-G-CU-GACGGA|G chl.O.si.1 750 CAAUACCGCGUGAGGGAAGACGGCC(---UAUG--)GG-UU--GUAAACC chl.O.si.1 800 UC|UUUU-CUCAGGGAGGAAA-uca-----(--------)---------a chl.O.si.1 850 UGACG|UGUACCU-GAGGAA-UAAGCAUC|GGCU-AACU-CCGUG(CCA- chl.O.si.1 900 -GCAGCC|GCGGU---AA-)GACGGAG|GAUGCAAGUGUUAU-CCGGAAU chl.O.si.1 950 CACUGGGC|GUAAAGCGUCUGUAGGUG|GUUUAAUAAG-|UCA-ACUGUU chl.O.si.1 1000 AAAUCUUGAGGC(------------------------------------- chl.O.si.1 1050 ---------------------------------UCA)ACUUCAA-AA-UC chl.O.si.1 1100 GCAGU--CGA-AAC-U|AUU-AG-A-CUAGAG-UA|UAGUA-----GGGG chl.O.si.1 1150 UAAAG|GGAAUUUCCAG-UGGAGCG(GUGAAA)UGCGUAGAGA---UUGG chl.O.si.1 1200 AAAGAACACCGAU---GGC(GAAG)GC|A|CUUUA-CUG|GGCUA--U-- chl.O.si.1 1250 -------------------------------------------------- chl.O.si.1 1300 ----------UACUAACACU|CAG-AGACGAAAGCUAGGGUAGCAAAUGG chl.O.si.1 1350 G(AUU-A-GAUAC)-CCCAGUAG-|UC-CUA-GCUGUAAACAAUGGAU-- chl.O.si.1 1400 --AC|UA|GAUG-UUGAACAG-----------------(--------auc chl.O.si.1 1450 gac--)-------------------------------------------- chl.O.si.1 1500 |------------------------------|CUGUGCAGUAUU-AAAGC chl.O.si.1 1550 (UAAC)GCGU-UAAGUAUCC|C|GCCUGGGAAGUAUGCUC(GCAA)GAGU chl.O.si.1 1600 GAAACUCAAAGGAAUUGACGGGGGCCC-GCACA-------AGCGGU|GGA chl.O.si.1 1650 GCAUGUGGUUUAAUUCG-(AUGCAACG)CGAAGAACCUUACCAGGGUUUG chl.O.si.1 1700 ACA----UG|-AU-ACG--AA------UUUCUUU-----(GAA-A-)GAA chl.O.si.1 1750 GA-AAG---UG--CC---------(GUUU------)---------GGAA- chl.O.si.1 1800 ---------------|CGUAUACA|C|AGGUGGUGCAUG|GCU|GUCGUC chl.O.si.1 1850 A|-G-CUCGU|GUC(GUGA)GAUGUUGGG(UUAAGU)CCCGCAACGAGCG chl.O.si.1 1900 CAACCCUUA|UUUUUA-G-UUGCC-------------------------- chl.O.si.1 1950 -------------------------------------------------- chl.O.si.1 2000 -------------------------------------------------- chl.O.si.1 2050 -----------------------------(--uuuuau--)--------- chl.O.si.1 2100 |GGAACUCUAAAAAGACUGCCGGU(UAUAA----)--------------- chl.O.si.1 2150 ---------ACCGGAGGAAGGCGGGGAUGACGUC-AA--GUCAGCAUGCC chl.O.si.1 2200 CCUUACACCCUGGGCUAC-ACACGUGCUACAUUGGG--CGAGACAAUGAG chl.O.si.1 2250 AU----GCUACUCU--------------------(----GCGA-)----- chl.O.si.1 2300 --------------AGAC-AAGCUAAUC-U-AU-AAACUCGUUCUAAGUU chl.O.si.1 2350 CGGAUUGUAGGC(--UGCAACUC)GCCUGCAUGAAGGUGGAAUCGCU--- chl.O.si.1 2400 ---AGUAAU-CGCUGG(UC--AGCUAU)ACAGCGGUGAAUUC--GUU--- chl.O.si.1 2450 -----------------CCCGGGCCUUGUACACACCGCCCGUCACACCAU chl.O.si.1 2500 GGAAGCUGG-UUAUGCCCGAAGUCGUU---ACUCU-AACC-(--gu-uug chl.O.si.1 2550 ga-----)-GG-AGG-----AU-GCCU-AAGG-UAGAAUUAGUGACUGGG chl.O.si.1 2600 GUGAAGUCGUAACAAGGUAACCGUACU(GGAA)GGUGCGGUUGGAUCACC chl.O.si.1 2650 UCCUUU--|~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ chl.O.si.1 2700 ~~~~~~~~~~~~~~~~| chl.O.si.2 0 |---------nnUAUUAAGAGAG-UU(U-GA)UCCU|GGCUCAGGAUGAA chl.O.si.2 50 CGC-UGGCGGUAUGCCU--AACACAUGCAAGUCGUACG|AGA-------- chl.O.si.2 100 --------guu(uu------------------u-------)aac------ chl.O.si.2 150 ----------------UCA-AGU--GGCGGACGGGUGAGUAA-CACGUGA chl.O.si.2 200 GA-AUCUGC-CUUU------------------------------------ chl.O.si.2 250 -------------------------------------------------A chl.O.si.2 300 GGA---------GGGGGACAACAA------------------------CU chl.O.si.2 350 G(GAAA)CGG-UUGCUAAUACC-CCAU-AU-------------------- chl.O.si.2 400 ------------------GCU-------(uucg---)-------AGU--- chl.O.si.2 450 ---GAAAU----------------------AGA-------------(--- chl.O.si.2 500 ----uu-ua--------)---------|----UCUGCCUAAAGA-GGA|G chl.O.si.2 550 -CUCGCGG|-CUGAUUA-GCUUGUUGG-UA-AG(G-UAAUGG)-CUUACC chl.O.si.2 600 AA|GGCGACGAU|CAGUAUCUG|GUUU(GAGA)GGACGAUCAGA|CACAC chl.O.si.2 650 UGGAA(CUGAGACACG)GUCCAGA-C--UCC(UA-CG)GG-A--GGCAG- chl.O.si.2 700 CAGUGGGG-AAUUUUCCG-CAAU-GGGC-(-GAAA)-G-CU-GACGGA|G chl.O.si.2 750 CAAUACCGCGUGAGGGAAGACGGCC(---UAUG--)GG-UU--GUAAACC chl.O.si.2 800 UC|UUUU-CUCAGGGAGGAAA-UCA-----(--------)---------a chl.O.si.2 850 UGACG|UGUACCU-GAGGAA-UAAGCAUC|GGCU-AACU-CCGUG(CCA- chl.O.si.2 900 -GCAGCC|GCGGU---AA-)GACGGAG|GAUGCAAGUGUUAU-CCGGAAU chl.O.si.2 950 CACUGGGC|GUAAAGCGUCUGUAGGUG|GUUUAAUAAG-|UCA-ACUGUU chl.O.si.2 1000 AAAUCUUGAGGC(------------------------------------- chl.O.si.2 1050 ---------------------------------UCA)ACUUCAA-AA-UC chl.O.si.2 1100 GCAGU--CGA-AAC-U|AUU-AG-A-CUAGAG-UA|UAGUA-----GGGG chl.O.si.2 1150 UAAAG|GGAAUUUCCAG-UGGAGCG(GUGAAA)UGCGUAGAGA---UUGG chl.O.si.2 1200 AAAGAACACCGAU---GGC(GAAG)GC|A|CUUUA-CUG|GGCUA--U-- chl.O.si.2 1250 -------------------------------------------------- chl.O.si.2 1300 ----------UACUAACACU|CAG-AGACGAAAGCUAGGGUAGCAAAUGG chl.O.si.2 1350 G(AUU-A-GAUAC)-CCCAGUAG-|UC-CUA-GCUGUAAACAAUGGAU-- chl.O.si.2 1400 --AC|UA|GAUG-UUGAACAG-----------------(--------auc chl.O.si.2 1450 gac--)-------------------------------------------- chl.O.si.2 1500 |------------------------------|CUGUGCAGUAUU-AAAGC chl.O.si.2 1550 (UAAC)GCGU-UAAGUAUCC|C|GCCUGGGAAGUAUGCUC(GCAA)GAGU chl.O.si.2 1600 GAAACUCAAAGGAAUUGACGGGGGCCC-GCACA-------AGCGGU|GGA chl.O.si.2 1650 GCAUGUGGUUUAAUUCG-(AUGCAACG)CGAAGAACCUUACCAGGGUUUG chl.O.si.2 1700 ACA----UG|-AU-ACG--AA------UUUCUUU-----(GAA-A-)GAA chl.O.si.2 1750 GA-AAG---UG--CC---------(GUUU------)---------GGAA- chl.O.si.2 1800 ---------------|CGUAUACA|C|AGGUGGUGCAUG|GCU|GUCGUC chl.O.si.2 1850 A|-G-CUCGU|GUC(GUGA)GAUGUUGGG(UUAAGU)CCCGCAACGAGCG chl.O.si.2 1900 CAACCCUUA|UUUUUA-G-UUGCC-------------------------- chl.O.si.2 1950 -------------------------------------------------- chl.O.si.2 2000 -------------------------------------------------- chl.O.si.2 2050 -----------------------------(--uuuuau--)--------- chl.O.si.2 2100 |GGAACUCUAAAAAGACUGCCGGU(UAUAA----)--------------- chl.O.si.2 2150 ---------ACCGGAGGAAGGCGGGGAUGACGUC-AA--GUCAGCAUGCC chl.O.si.2 2200 CCUUACACCCUGGGCUAC-ACACGUGCUACAUUGGG--CGAGACAAUGAG chl.O.si.2 2250 AU----GCUACUCU--------------------(----GCGA-)----- chl.O.si.2 2300 --------------AGAC-AAGCUAAUC-U-AU-AAACUCGUUCUAAGUU chl.O.si.2 2350 CGGAUUGUAGGC(--UGCAACUC)GCCUGCAUGAAGGUGGAAUCGCU--- chl.O.si.2 2400 ---AGUAAU-CGCUGG(UC--AGCUAU)ACAGCGGUGAAUUC--GUU--- chl.O.si.2 2450 -----------------CCCGGGCCUUGUACACACCGCCCGUCACACCAU chl.O.si.2 2500 GGAAGCUGG-UUAUGCCCGAAGUCGUU---ACUCU-AACC-(--gu-uug chl.O.si.2 2550 ga-----)-GG-AGG-----AU-GCCU-AAGG-UAGAAUUAGUGACUGGG chl.O.si.2 2600 GUGAAGUCGUAACAAGGUAACCGUACU(GGAA)GGUGCGGUUGGAUCACC chl.O.si.2 2650 UCCUUU--|~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ chl.O.si.2 2700 ~~~~~~~~~~~~~~~~| chl.S.pseu 0 |----------nnnnnUUUAAAG-UU(U-GA)UCMU|GGCUCAGGAUGAA chl.S.pseu 50 CGC-UGGCGGUAUGCCU--AACACAUGCAAGUCGUACG|GGA-------- chl.S.pseu 100 --------guu(uu------------------u-------)aac------ chl.S.pseu 150 ----------------UCU-AGU--GGCGGACGGGUGAGUAA-CACGUGA chl.S.pseu 200 GA-AUUUGC-CUUU------------------------------------ chl.S.pseu 250 -------------------------------------------------A chl.S.pseu 300 GGA---------GGGGGAUAACAA------------------------UU chl.S.pseu 350 G(GAAA)CAA-AUGCUAAUACC-CCAU-AU-------------------- chl.S.pseu 400 ------------------GCU-------(uucg---)-------AGU--- chl.S.pseu 450 ---GAAAu----------------------GGAU------------(--- chl.S.pseu 500 --uuau-auuu------)---------|---AUCCGCCUAGAGA-GAA|G chl.S.pseu 550 -CUCGCGG|-CUGAUUA-GCUUGUUGG-UA-AG(G-UAAGAG)-CUUACC chl.S.pseu 600 AA|GGCGACGAU|CAGUAUCUG|GUUU(GAGA)GGACGAUCAGA|CACAC chl.S.pseu 650 UGGAA(CUGAGACACG)GUCCAGA-C--UCC(UA-CG)GG-A--GGCAG- chl.S.pseu 700 CAGUGGGG-AAUUUUCCG-CAAU-GGGC-(-GAAA)-G-CU-GACGGA|G chl.S.pseu 750 CAAUACCGCGUGAGGGAAGACUGCC(---UAUG--)GG-UU--GUAAACC chl.S.pseu 800 UC|UUUU-UUCAGGGAGGaau---------(---caa--)---------- chl.S.pseu 850 ugaCg|uguACCU-GAAGAA-UAAGCAUC|GGCU-AACU-CCGUG(CCA- chl.S.pseu 900 -GCAGCC|GCGGU---AA-)GACGGAG|GAUGCAAGUGUUAU-CCGGAAU chl.S.pseu 950 CACUGGGC|GUAAAGCGUCUGUAGGUG|GUUUAAUAAG-|UCA-ACUGUU chl.S.pseu 1000 AAAUCUUGAGGC(------------------------------------- chl.S.pseu 1050 ---------------------------------UCA)ACUUCAA-AA-UC chl.S.pseu 1100 GCAGU--CGA-AAC-U|AUU-AG-A-CUAGAG-UA|UAGUA-----GAGG chl.S.pseu 1150 UAAAG|GGAAUUUCCAG-UGGAGCG(GUGAAA)UGCGUAGAUA---UUGG chl.S.pseu 1200 AAAGAACACCGAU---GGC(GAAA)GC|A|CUUUA-CUG|GGCUA--U-- chl.S.pseu 1250 -------------------------------------------------- chl.S.pseu 1300 ----------UACUAACACU|CAG-AGACGAAAGCUAGGGUAGCAAAUGG chl.S.pseu 1350 G(AUU-A-GAUAC)-CCCAGUAG-|UC-CUA-GCCGUAAACAAUGGAU-- chl.S.pseu 1400 --AC|UA|GAUG-UUGAACAG-----------------(--------auc chl.S.pseu 1450 gac--)-------------------------------------------- chl.S.pseu 1500 |------------------------------|CUGUGCAGUAUC-AAAGC chl.S.pseu 1550 (UAAC)GCGU-UAAGUAUCC|C|GCCUGGGAAGUAUGCUC(GCAA)GAGU chl.S.pseu 1600 GAAACUCAAAGGAAUUGACGGGGGCCC-GCACA-------AGCGGU|GGA chl.S.pseu 1650 GCAUGUGGUUUAAUUCG-(AUGCAACG)CGAAGAACCUUACCAGGGUUUG chl.S.pseu 1700 ACA----UG|-AU-ACG--AA------UUUCUUU-----(GAA-A-)GAA chl.S.pseu 1750 GA-AAG---UG--CC---------(GUUU------)---------GGAA- chl.S.pseu 1800 ---------------|CGUAUACA|C|AGGUGGUGCAUG|GCU|GUCGUC chl.S.pseu 1850 A|-G-CUCGU|GUC(GUGA)GAUGUUGGG(UUAAGU)CCCGCAACGAGCG chl.S.pseu 1900 CAACCCUUG|UUUUUA-G-UUGCC-------------------------- chl.S.pseu 1950 -------------------------------------------------- chl.S.pseu 2000 -------------------------------------------------- chl.S.pseu 2050 -----------------------------(--uuuuau--)--------- chl.S.pseu 2100 |GGAACUCUAAAAAGACUGCCGGU(UAUAA----)--------------- chl.S.pseu 2150 ---------ACCGGAGGAAGGUGGGGAUGACGUC-AA--GUCAGCAUGCC chl.S.pseu 2200 CCUUACACCCUGGGCUAC-ACACGUGCUACAUUGGG--CGAGACAAUGAG chl.S.pseu 2250 AU----GCAAAUCU--------------------(----GUGA-)----- chl.S.pseu 2300 --------------AGAC-UAGCUAAUC-U-AU-AAACUCGUUCUAAGUU chl.S.pseu 2350 CGGAUUGUAGGC(--UGCAACUC)GCCUACAUGAAGGUGGAAUCGCU--- chl.S.pseu 2400 ---AGUAAU-CGCUGG(UC--AGCUAU)ACAGCGGUGAAUUC--GUU--- chl.S.pseu 2450 -----------------CCCGGGCCUUGUACACACCGCCCGUCACACCAU chl.S.pseu 2500 GGAAGCUGG-UUAUACCCGAAGUCAUU---ACUCU-AACC-(-----auu chl.S.pseu 2550 u------)-GG-GGG-AGG-GU-GCCU-AAGG-UAGAAUUAGUGACUGGG chl.S.pseu 2600 GUGAAGUCGUAACAAGGUAACCGUACU(GGAA)GGUGCGGUUGGAUCACC chl.S.pseu 2650 UCCUUU--|~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ chl.S.pseu 2700 ~~~~~~~~~~~~~~~~| chl.O.dani 0 |---------nnnnnnnnnnnnn~nn(n-nn)nnnn|nnnnnnnnnnnnn chl.O.dani 50 nnn-nnnnnnnnnnnnn--nnnnnnnnnnnnnnnnnnG|AA--------- chl.O.dani 100 --------aaa(gg------------------aaa-----)uuu------ chl.O.dani 150 ----------------UU--AGU--GGCGAACGGGUGAGUAA-CGCGUGA chl.O.dani 200 GA-AUUUGC-CUUU------------------------------------ chl.O.dani 250 -------------------------------------------------A chl.O.dani 300 GGA---------AGAGAAUAACAA------------------------UU chl.O.dani 350 A(GAAA)UAG-UUGCUAAAACU-CUAU-AU-------------------- chl.O.dani 400 ------------------gcn-------(gaga---)-------ugu--- chl.O.dani 450 ---gaaa-----------------------AAA-------------(--- chl.O.dani 500 -----g-aaa-------)---------|----UUUGCCUAAAGA-GAA|G chl.O.dani 550 -CUCGCGU|-CUGAUUA-GCUAGUUGG-UA-GG(G-UAAAGG)-CUUACC chl.O.dani 600 AA|GGCGACGAU|CAGUAGCUG|GUCU(GAGA)GGAUGAUCAGC|CACAC chl.O.dani 650 UGGAA(CUGAGACACG)GUCCAGA-C--UCC(UA-CG)GG-A--GGCGG- chl.O.dani 700 CNGUGAGG-AAUUUUCNG-CAAU-GGGC-(-GAAA)-GCCU-GACGGA|G chl.O.dani 750 CAACACCGCGUGAGGGAUGAAGGCU(---GGCG--)AG-UN--GUAAACC chl.O.dani 800 UC|UUUU-CUCAAGGAGGAAGN--------(--------)--------UC chl.O.dani 850 UGACG|UU-ACUU-GAGGAA-UAAGCAUN|GGCU-AACC-CUGUG(CCA- chl.O.dani 900 -GCAGCC|GCGGU---AA-)UACGGGG|NAUGCAAGUGUUAU-CCGGAAU chl.O.dani 950 UAUUGGGC|GUAAAGCGUCUGCAGGUG|GAUAAUUAAG-|UCU-UUUGUA chl.O.dani 1000 AAAGCUUCGGGC(------------------------------------- chl.O.dani 1050 ---------------------------------UNA)ACCUGGA-AU-CU chl.O.dani 1100 GCAAA--AGA-AAC-U|AUU-UA-U-CUAGAG-AG|UCAUA-----GAGG chl.O.dani 1150 GAAAG|GGAAUUUCCAG-UGNAGCG(GUGAAA)UGCGUAGAGA---UUGG chl.O.dani 1200 AAAGAACACCAAA---AGC(GAAA)GC|A|CUUUC-CUG|GGUGN--N-- chl.O.dani 1250 -------------------------------------------------- chl.O.dani 1300 ----------CNCUGACANU|NAN-GGACGAAAGCUAGGGGAGCAAACAG chl.O.dani 1350 G(AUU-A-GAUAC)-CCUGGUAG-|UC-CUA-GCCGUAAACGAUGGAU-- chl.O.dani 1400 --AC|UA|GAUG-UUGUAUAUU----------------(--------uuu chl.O.dani 1450 -----)-------------------------------------------- chl.O.dani 1500 |-----------------------------A|AUAUACAGNGUC-GU-NC chl.O.dani 1550 (UAAC)GCGU-NUAGUGUCC|C|GCCUGGGAAGUNUGCUN(GCAA)GACN chl.O.dani 1600 GAAACUCAAAGGAAUUGACGGNNNNNN-GCACA-------AGNNNN|NNN chl.O.dani 1650 NNNNNNNGUUUAAUUCG-(NNNNAACA)CGAAGAACCUUACCAGGACUUG chl.O.dani 1700 ACA----UG|-AA-GAG--AA------AUUUUUU-----(GAA-A-)GAA chl.O.dani 1750 AA-AUG---U---GC---------(NUCG------)---------gc--- chl.O.dani 1800 ---------------|cucuuACA|C|AGGUGGUGCAUG|GCU|GUCGUC chl.O.dani 1850 A|-G-CUCGU|GUC(GUGA)GAUGUUGGG(UNAAGU)CCCGUAACGAGCG chl.O.dani 1900 CAACCCUUG|UCUUUA-G-UU----------------------------- chl.O.dani 1950 -------------------------------------------------- chl.O.dani 2000 -------------------------------------------------- chl.O.dani 2050 -----------------------------(--nguuu---)--------- chl.O.dani 2100 |----UCCUAAAGAGACUGCCGAU(UAUAA----)--------------- chl.O.dani 2150 ---------AUCGGAGGAAGGUGAGGAUGACGUN-NA--GUCAUCAUGCC chl.O.dani 2200 CCUUAAGUUCUGGGCUAC-ACACGUGCUACAAUGGG--UAUGACAAAAAG chl.O.dani 2250 UU----GCUAAUUC--------------------(----GUGA-)----- chl.O.dani 2300 --------------GAAU-GUGCUAAUC-UU-A-AAACAUAUCCUUAGUU chl.O.dani 2350 CAGAUUGUAGGC(--UGCAACUC)GCCUACAUGAAGGUGGAAUCGCU--- chl.O.dani 2400 ---AGUAAU-CGCAGG(UC--AGCUAU)ACUGCGGUGAAUAC--GUU--- chl.O.dani 2450 -----------------CCCGGGCCUUGUACACACCGCCCGUCACACCAU chl.O.dani 2500 GGCAGCUNG-UUAUACCCGAAGNUAUn---nnnnn-nnnn-(-----nnn chl.O.dani 2550 n------)-nn-nnn-nnn-nn-nnnn-nnnn-nnnnnnnnnnnnnnnnn chl.O.dani 2600 nnnnnnnnnnnnnnnnnnnnnnnnnnn(nnnn)nnnnnnnnnnnnnnnnn chl.O.dani 2650 nnnnnn--|~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ chl.O.dani 2700 ~~~~~~~~~~~~~~~~| chl.P.litt 0 |---------AAACUAUCGAGAG-UU(U-GA)UCCU|GGCUCAGGAUGAA chl.P.litt 50 CGC-UGGCGGUAUGCUU--UACACAUGCAAGUCGUACG|AA--------- chl.P.litt 100 --------agu(gu------------------uaaa----)acu------ chl.P.litt 150 ----------------UU--AGU--GGCGGACGGGUGAGUAA-CACGUGA chl.P.litt 200 GA-AUUUAC-CUUU------------------------------------ chl.P.litt 250 -------------------------------------------------A chl.P.litt 300 GGA---------GGGGAAUAACAG------------------------UU chl.P.litt 350 G(GAAA)UGA-CUGCUAAUGCC-GCAU-AU-------------------- chl.P.litt 400 -------C----------GUAAUUAUGA(gacaua-)UCAUAACUAU--- chl.P.litt 450 ---GAAA-----------------------GAA-------------(--- chl.P.litt 500 -------gaaa------)---------|----UUCGCCUAAAGA-AAA|G chl.P.litt 550 -CUUGCGU|-CUGAUUA-GCUAGUUGG-UA-AG(GgUAAAGG)-CU-A-C chl.P.litt 600 AA|GGCGACGAU|CAGUAGCUG|GUUU(GAGA)GGACGACCAGU|CACAC chl.P.litt 650 UGG-A(CUGAGACACG)GUCCAGA-C--UAC(UA-CG)GG-A--GGCAG- chl.P.litt 700 CAGUGGGG-AAUUUUCUG-CAAU-GGGC-(-GAAA)---CUgAACAGA|G chl.P.litt 750 CAAUACCGCGUGAGGGAAGAAAGCC(---CACA-G)GG-UU--GUAAACC chl.P.litt 800 UC|UUUU-GUCAAGGAAGAAGAu-------(--------)--------UC chl.P.litt 850 UGACG|UU-ACUU-GACGAA-UAAGCAUC|GGCU-AACU-CCGUG(CCA- chl.P.litt 900 -GCAGCC|GCGGU---AAG)GACGGGG|GAUGCAAGUGUUAU-CCGGAAU chl.P.litt 950 UACUGGGC|GUAAAGCGUUUGUAGGUG|GUUUAGUAAG-|UCU-AUUGUU chl.P.litt 1000 AAAGCUUGAAGC(------------------------------------- chl.P.litt 1050 ---------------------------------UUA)ACUUCAA-AA-GU chl.P.litt 1100 GUAAU--AGA-AAC-U|ACU-AG-A-CUUGAG-GA|UAGUA-----GGGG chl.P.litt 1150 UAAAG|GGAAUUUCCAG-UGGAGCG(GUGAAA)UGCGUAGAGA---UUGG chl.P.litt 1200 AAGGACCACCGAU---GGC(GAAG)GC|A|CUUUA-CUG|GGCUA--U-- chl.P.litt 1250 -------------------------------------------------- chl.P.litt 1300 ----------UUCUGACACU|AAG-AGACGAAAGCUAGGGUAGCAAAUGG chl.P.litt 1350 G(AUU-A-GAUAC)-CCCAGUAG-|UC-CUA-GCUGUAAACGAUGAAU-- chl.P.litt 1400 --AC|UA|GAUG-UUGCGUGU-----------------(--------auc chl.P.litt 1450 gau--)-------------------------------------------- chl.P.litt 1500 |------------------------------|CCAUGCAGUAUC-GUAGC chl.P.litt 1550 (UAAC)GCGU-UAAGUAUUC|C|GCCUGGGAACUAUGCUC(GCAA)GAGU chl.P.litt 1600 GAAACUCAAAGGAAUUGACGGGGACCC-GCACA-------AGCGUG|GCA chl.P.litt 1650 GCAUGUGGUUUAAUUCG-(AUGCAACG)CGAAGAACCUUACCAGGGUUUG chl.P.litt 1700 ACA----UU|-AU-GUA--AA------UCUAUUU-----(GAA-A-)GAA chl.P.litt 1750 CA-GAG---UG--CC---------(CUCG------)---------GGAA- chl.P.litt 1800 ---------------|UACAUAAA|C|AGGUGGUGCAUG|GCU|GUCGUC chl.P.litt 1850 A|-G-CUCGU|GUC(GUGA)GAUGUUGGG(UUAAGU)CCCGCAACGAGCG chl.P.litt 1900 CAACCCUUG|UUUCUA-G-UUGCU-------------------------- chl.P.litt 1950 -------------------------------------------------- chl.P.litt 2000 -------------------------------------------------- chl.P.litt 2050 -----------------------------(--uuacaaa-)--------- chl.P.litt 2100 |AGGAAUCUUGAAG-ACUGCCGGU(UAUAA----)--------------- chl.P.litt 2150 ---------ACCGGAGGAAGGUGAGGAUGACGUC-AA--GUCAUCAUGCC chl.P.litt 2200 CCUUAUACCCUGGGCUAC-ACACGUGCUACAUUGGA--UAAGACAAAAAG chl.P.litt 2250 UU----GCGAAUUU--------------------(----GUGA-)----- chl.P.litt 2300 --------------AAAU-AAGCUAAUC-UUUA-AACUUAUUCCUAAGUU chl.P.litt 2350 CGGAUUGAAGGC(--UGCAACUC)GCCUUCAUGAAGAUGGAAUCGCU--- chl.P.litt 2400 ---AGUAAU-CGCUGG(UC--AGCUAU)ACAGCGGUGAAUCC--GUU--- chl.P.litt 2450 -----------------CCCGGGUCUUGUACACACCGCCCGUCACACCAU chl.P.litt 2500 GGAAGCUGG-UUAUACCCGAAGUCGUU---UUCUU-AACC-(--uu-uuu chl.P.litt 2550 -------)-GG-AGA-GAG-GC-GCCU-AAGG-UAAGGCUAGUGACUGGG chl.P.litt 2600 GUGAAGUCGUAACAAGGUAGCCGUACG(GGAA)CGUGCGGCUGGAUCACC chl.P.litt 2650 UCCUUA--|~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ chl.P.litt 2700 ~~~~~~~~~~~~~~~~| chl.H.akas 0 |-uuuuagga-uaUAAUUGAGAG-UU(U-GA)UCCU|GGCUCAGGAUGAA chl.H.akas 50 CGC-UGGCGGUAUGCUU--AACACAUGCAAGUCGAACG|AG------agg chl.H.akas 100 uuu-uuaaaga(uu------------------uu------)ucuuaaa-- chl.H.akas 150 -aaacug---------AA--AGU--GGCGGACGGGUGAGUAA-CACGUGA chl.H.akas 200 GA-AUCUGC-CUUU------------------------------------ chl.H.akas 250 -------------------------------------------------A chl.H.akas 300 GGA---------AAGGGACAACAU------------------------UU chl.H.akas 350 G(GAAA)CGA-AUGCUAAUACC-UUAU-AU-------------------- chl.H.akas 400 ------------------gccuauuauaacuuguauaauuaauaggu--- chl.H.akas 450 ---gaaa-----------------------AG--------------(--- chl.H.akas 500 -----u-uuu-------)---------|-----CUGCCUAGAGA-GGA|G chl.H.akas 550 -CUCGCGG|-CUGAUUA-GCUAGUUGG-UG-GG(G-UAAUGG)-CCUACC chl.H.akas 600 AA|GGCGACGAU|CAGUAACUG|AUUU(GAGA)GGAUGAUCAGU|CACAC chl.H.akas 650 UGGAA(CUGAGACACG)GUCCAGA-C--UCC(UA-CG)GG-A--GGCAG- chl.H.akas 700 CAGUGGGG-AAUUUUCUG-CAAU-GGGC-(-GAAA)-GCCU-GACAGA|G chl.H.akas 750 CAAUACCGCGUGAGGGAUGACAGUC(--CUAUG--)GA-UU--GUAAACC chl.H.akas 800 UC|UUUU-UUCAGGGAGGAAGU--------(--------)--------UC chl.H.akas 850 UGACG|UU-ACCU-GAAGAA-UAAGCAUC|GGCU-AACU-CCGUG(CCA- chl.H.akas 900 -GCAGCC|GCGGU---AA-)UACGGAG|GAUGCAAGUGUUAU-CCGGAAU chl.H.akas 950 CACUGGGC|GUAAAGCGUCUGUAGGUG|GUUUAAUGUG-|UCU-GUUGUU chl.H.akas 1000 AAAUCUUAAGGC(------------------------------------- chl.H.akas 1050 ---------------------------------UCA)ACCUUAA-AC-CA chl.H.akas 1100 GCAAU--GGA-AAC-U|AUUAUG-A-CUUGAG-UG|UGGUA-----GAGG chl.H.akas 1150 UAGAG|GGAAUUUCCAG-UGGAGCG(GUGAAA)UGCGUAGAUA---UUGG chl.H.akas 1200 AAAGACCACCAAU---GGC(GAAG)GC|A|CUCUA-CUG|GGCCA--U-- chl.H.akas 1250 -------------------------------------------------- chl.H.akas 1300 ----------UACUGACACU|GAG-AGACGAAAGCUAGGGGAGCAAAUGG chl.H.akas 1350 G(AUU-A-GAUAC)-CCCAGUAG-|UC-CUA-GCUGUAAACGAUGGAU-- chl.H.akas 1400 --AC|UA|GAUG-UCGCAUG------------------(-------uauc chl.H.akas 1450 gacc-)-------------------------------------------- chl.H.akas 1500 |------------------------------|-CAUGCGGUAUU-AUAGC chl.H.akas 1550 (UAAC)GCGU-UAAGUAUCC|C|GCCUGGGAAGUAUGCUC(GCAA)GAGU chl.H.akas 1600 GAAACUCAAAGGAAUUGACGGGGGCCC-GCACA-------AGCGGU|GGA chl.H.akas 1650 GCAUGUGGUUUAAUUCG-(AUGCAACG)CGAAGAACCUUACCAGGGUUUG chl.H.akas 1700 ACA----UA|-GU-ACG--AA------GUUUUUU-----(GAA-A-)AAA chl.H.akas 1750 AA-ACC----A--CC---------(UUCG------)---------GGAA- chl.H.akas 1800 ---------------|CGUACAUA|C|AGGUGGUGCAUG|GCU|GUCGUC chl.H.akas 1850 A|-G-CUCGU|GUC(GUGA)GAUGUUGGG(UUAAGU)CCCGCAACGAGCG chl.H.akas 1900 UAACCCUUG|UUUUUA-G-UUGCC---u---------------------- chl.H.akas 1950 -------------------------------------------------- chl.H.akas 2000 -------------------------------------------------- chl.H.akas 2050 -----------------------------(--uucg----)--------a chl.H.akas 2100 |GGAUAUUUAGAAAGACUGCCGAU(UAUAA----)--------------- chl.H.akas 2150 ---------AUCGGAGGAAGGUAAGGACGACGUC-AA--GUCAUCAUGCC chl.H.akas 2200 CCUUACACUCUGGGCUAC-ACACGUGCUACAUUGGG--UAGAACAAUAAG chl.H.akas 2250 UU----GCUAAGUU--------------------(----GCGA-)----- chl.H.akas 2300 --------------AACC-AAGCGAAUC-UUC--AAAUCUACUCUAAGUU chl.H.akas 2350 CGGAUUGUAGGC(--UGCAACUC)GCCUACAUAAAGAUGGAAUCGCU--- chl.H.akas 2400 ---AGUAAU-CGCUGG(UC--AGCUAC)ACAGCGGUGAAU-C--GUU--- chl.H.akas 2450 -----------------CCCGGGCCUUGUACACACCGCCCGUCACACCAU chl.H.akas 2500 GGAAGCUGG-UCACACCCAAAGUCGUU---AUUCU-AACC-(-----guu chl.H.akas 2550 u------)-GG-AGG-AAG-GC-GCCU-AAGG-UAGGAUUGGUGACUGGG chl.H.akas 2600 GUGAAGUCGUAACAAGGUAGCCGUACC(GGAA)GGUGCGGCUGGAUCACC chl.H.akas 2650 UCCUUA--|uaaagguuu~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ chl.H.akas 2700 ~~~~~~~~~~~~~~~~| (2)-Unclas 0 | (2)-Unclas 23 - (2)-Unclas 85 -- (2)-Unclas 88 - (2)-Unclas 103 --------------------------------------------- (2)-Unclas 148 - (2)-Unclas 156 --------- (2)-Unclas 173 -- (2)-Unclas 178 ------------------- (2)-Unclas 297 -- (2)-Unclas 303 --------- (2)-Unclas 316 -------- (2)-Unclas 324 --------- (2)-Unclas 345 --- (2)-Unclas 354 -- (2)-Unclas 360 - (2)-Unclas 371 - (2)-Unclas 375 - (2)-Unclas 378 - (2)-Unclas 380 --------------------------- (2)-Unclas 412 - (2)-Unclas 422 ---- (2)-Unclas 426 -- (2)-Unclas 438 ------ (2)-Unclas 462 ------------------ (2)-Unclas 491 - (2)-Unclas 494 - (2)-Unclas 499 - (2)-Unclas 507 -- (2)-Unclas 538 - (2)-Unclas 544 - (2)-Unclas 550 - (2)-Unclas 569 -- (2)-Unclas 581 - (2)-Unclas 585 - (2)-Unclas 606 ----- (2)-Unclas 612 - (2)-Unclas 618 | (2)-Unclas 633 | (2)-Unclas 639 | (2)-Unclas 643 -- (2)-Unclas 666 - (2)-Unclas 677 - (2)-Unclas 680 | (2)-Unclas 684 - (2)-Unclas 690 - (2)-Unclas 692 -- (2)-Unclas 698 --- (2)-Unclas 715 - (2)-Unclas 718 - (2)-Unclas 730 - (2)-Unclas 734 -------------------------------------- (2)-Unclas 772 ---------------------- (2)-Unclas 805 ------- (2)-Unclas 822 - (2)-Unclas 828 - (2)-Unclas 830 | (2)-Unclas 833 ----- (2)-Unclas 841 ------------- (2)-Unclas 854 -- (2)-Unclas 866 - (2)-Unclas 889 - (2)-Unclas 899 --- (2)-Unclas 907 - (2)-Unclas 913 --- (2)-Unclas 918 -| (2)-Unclas 926 | (2)-Unclas 931 - (2)-Unclas 942 - (2)-Unclas 958 | (2)-Unclas 988 - (2)-Unclas 990 | (2)-Unclas 993 - (2)-Unclas 1074 --------- (2)-Unclas 1086 - (2)-Unclas 1089 - (2)-Unclas 1097 - (2)-Unclas 1099 | (2)-Unclas 1105 --- (2)-Unclas 1116 - (2)-Unclas 1120 - (2)-Unclas 1123 - (2)-Unclas 1125 ---- (2)-Unclas 1131 |- (2)-Unclas 1142 ---- (2)-Unclas 1164 - (2)-Unclas 1165 ------ (2)-Unclas 1177 - (2)-Unclas 1183 -------------------------------------|----- (2)-Unclas 1226 -------------- (2)-Unclas 1243 - (2)-Unclas 1245 -- (2)-Unclas 1299 ----------- (2)-Unclas 1314 - (2)-Unclas 1320 - (2)-Unclas 1325 | (2)-Unclas 1355 - (2)-Unclas 1361 ------- (2)-Unclas 1371 | (2)-Unclas 1373 -- (2)-Unclas 1383 - (2)-Unclas 1387 - (2)-Unclas 1398 ---- (2)-Unclas 1404 - (2)-Unclas 1412 - (2)-Unclas 1415 - (2)-Unclas 1421 - (2)-Unclas 1427 --------------------- (2)-Unclas 1452 --- (2)-Unclas 1464 -- (2)-Unclas 1467 -- (2)-Unclas 1474 ---- (2)-Unclas 1479 -- (2)-Unclas 1483 -- (2)-Unclas 1487 ------------ (2)-Unclas 1499 --------------------------------- (2)-Unclas 1536 ------------ (2)-Unclas 1560 - (2)-Unclas 1565 | (2)-Unclas 1572 | (2)-Unclas 1575 - (2)-Unclas 1595 - (2)-Unclas 1626 - (2)-Unclas 1646 - (2)-Unclas 1675 ------ (2)-Unclas 1682 ------- (2)-Unclas 1704 --- (2)-Unclas 1709 | (2)-Unclas 1713 - (2)-Unclas 1721 ------ (2)-Unclas 1736 --- (2)-Unclas 1743 - (2)-Unclas 1752 - (2)-Unclas 1767 ------- (2)-Unclas 1777 --------- (2)-Unclas 1787 --- (2)-Unclas 1790 ----- (2)-Unclas 1802 ------------- (2)-Unclas 1821 -- (2)-Unclas 1824 | (2)-Unclas 1832 --- (2)-Unclas 1842 ---------- (2)-Unclas 1865 -- (2)-Unclas 1868 -- (2)-Unclas 1871 -- (2)-Unclas 1883 ---------- (2)-Unclas 1893 ------ (2)-Unclas 1901 - (2)-Unclas 1916 - (2)-Unclas 1924 - (2)-Unclas 1937 - (2)-Unclas 1939 -- (2)-Unclas 1959 -------------------------------------- (2)-Unclas 1997 -------------------------------------------------- (2)-Unclas 2047 -------------------------------- (2)-Unclas 2087 --- (2)-Unclas 2093 -- (2)-Unclas 2114 ||| (2)-Unclas 2130 ---- (2)-Unclas 2136 ------ (2)-Unclas 2142 - (2)-Unclas 2153 ------ (2)-Unclas 2187 -- (2)-Unclas 2218 - (2)-Unclas 2237 - (2)-Unclas 2253 --- (2)-Unclas 2264 -------------------- (2)-Unclas 2285 ---- (2)-Unclas 2293 - (2)-Unclas 2328 - (2)-Unclas 2363 -- (2)-Unclas 2397 ------ (2)-Unclas 2420 - (2)-Unclas 2443 - (2)-Unclas 2448 ------------------- (2)-Unclas 2527 ---- (2)-Unclas 2561 - (2)-Unclas 2577 - (2)-Unclas 2582 - (2)-Unclas 2657 - (2)-Unclas 2716 | chl.OM283 0 |~~~~~~~~~~~~~~~~~~AGAG-UU(U-GA)UCAU|GGCUCAGGAUGAA chl.OM283 50 CGC-UGGCGGUAUGCUU--AACACAUGCAAGUCGUACG|AGA-------- chl.OM283 100 --------auu(uu------------------u-------)aau------ chl.OM283 150 ----------------UCU-AGU--GGCGGACGGGUGAGUAA-CACGUGA chl.OM283 200 GA-AUCUGC-CCUU------------------------------------ chl.OM283 250 -------------------------------------------------A chl.OM283 300 GGA---------GAAGGAUAACAG------------------------CU chl.OM283 350 G(GAAA)CGG-UUGCUAAUACU-UCAU-AU-------------------- chl.OM283 400 ------------------GCC-------(GCAA---)-------GGU--- chl.OM283 450 ---GAAA-----------------------GAA-------------(--- chl.OM283 500 -----u-gua-------)---------|----UUCGCCUAAGGA-GGA|G chl.OM283 550 -CUCGCGU|-CUGAUUA-GCUAGUUGG-AG-AG(G-UAAUGG)-CUCACC chl.OM283 600 AA|GGCGACGAU|CAGUAGCUG|GUUU(GAGA)GGACGAUCAGC|CACAC chl.OM283 650 UGGGA(CUGAGACACG)GCCCAGA-C--UCC(UA-CG)GG-A--GGCAG- chl.OM283 700 CAGUGGGG-AAUUUUCCG-CAAU-GGGC-(-GAAA)-GCCU-GACGGA|G chl.OM283 750 CAAUACCGCGUGAGGGAUGACAGCC(---UGUG--)GG-UU--GUAAACC chl.OM283 800 UC|UUUU-CUCAAGGAAGAA----------(--guuc--)---------- chl.OM283 850 UGACG|GU-ACUU-GAGGAA-UAAGCAUC|GGCU-AACU-CUGUG(CCA- chl.OM283 900 -GCAGCC|GCGGU---AA-)UACAGAG|GAUGCAAGCGUUAU-CCGGAAU chl.OM283 950 CACUGGGC|AUAAAGCGUCUGUAGGUG|GUUCGGUAAG-|UCU-GCUGUU chl.OM283 1000 AAAGACUAGGGC(------------------------------------- chl.OM283 1050 ---------------------------------CUA)ACCCUAG-AA-AA chl.OM283 1100 GCAGU--GGA-AAC-U|GCC-AA-A-CUUGAG-UG|UGGUA-----GAGG chl.OM283 1150 UAGAG|GGAAUUCCUAG-UGUAGCG(GUGAAA)UGCGUAGAUA---UUAG chl.OM283 1200 GAAGAACACCAAU---GGC(GAAG)GC|A|CUCUA-CUG|GGCCA--U-- chl.OM283 1250 -------------------------------------------------- chl.OM283 1300 ----------AACUGACACU|GAG-AGACGACAGCUAGGGGAGCAAAUGG chl.OM283 1350 G(AUU-A-GAUAC)-CCCAGUAG-|UC-CUA-GCCGUAAACGAUGGAU-- chl.OM283 1400 --AC|UA|GAUG-UUGCACG------------------(-------uauu chl.OM283 1450 aacc-)-------------------------------------------- chl.OM283 1500 |------------------------------|-CGUGCAGUAUC-GUAGC chl.OM283 1550 (UAAG)GCGU-UAAGUAUCC|C|GCCUGGGAAGUACGCUC(GCAA)GAGU chl.OM283 1600 GAAACUCAAAGGAAUUGACGGGGGCCC-GCACA-------AGCGGU|GGA chl.OM283 1650 GUAUGUGGUUUAAUUCG-(AUGCAACG)CGAAGAACCUUACCAGGGCUUG chl.OM283 1700 ACA----UG|-UC-ACG--GA------UCUUUUU-----(GAA-A-)GGA chl.OM283 1750 AA-GAG---UG--CC---------(uucg------)---------GGAA- chl.OM283 1800 ---------------|CGUGAACA|C|AGGUGGUGCAUG|GCU|GUCGUC chl.OM283 1850 A|-G-CUCGU|GUC(GUGA)GAUGUUGGG(UUAAGU)CCCGCAACGAGCG chl.OM283 1900 UAACCCUUG|UUUUUA-G-UUGCC-auca--------------------- chl.OM283 1950 -------------------------------------------------- chl.OM283 2000 -------------------------------------------------- chl.OM283 2050 -----------------------------(--uuuagu--)-------ug chl.OM283 2100 |GGCACUUUAAAAAGACUGCCGGU(GAUAA----)--------------- chl.OM283 2150 ---------ACCGGAGGAAGGUGAGGACGACGUC-AA--GUCAGCAUGCC chl.OM283 2200 CCUUACGCCCUGGGCUAC-ACACGUACUACAAUGGU--CGAGACAAAGAG chl.OM283 2250 CU----GCUAGCCU--------------------(----GCGA-)----- chl.OM283 2300 --------------AGGU-ACGCUAAUC-UCAU-AAACUCGGUCUCAGUU chl.OM283 2350 CGGAUUGCAGGC(--UGCAACUC)GCCUGCAUGAAGGUGGAAUCGCU--- chl.OM283 2400 ---AGUAAU-CGCCGG(UC--AGCUAU)ACGGCGGUGAAUCC--GUU--- chl.OM283 2450 -----------------CCCGGGCCUUGUACACACCGCCCGUCACACCAU chl.OM283 2500 GGAAGCUAG-CCAUACCCAAAGUCGUU---ACCUU-AACC-(-----uuu chl.OM283 2550 u------)-GG-AGG-GGG-GC-GCCU-AAGG-UAAGGUUAGUGACUGGG chl.OM283 2600 GUGAAGUCCUAACAAGGUAGCCCUACU(GGAA)GGUGUGGUUGGAUCACC chl.OM283 2650 UCCUU---|~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ chl.OM283 2700 ~~~~~~~~~~~~~~~~| chl.OM270 0 |~~~~~~~~~~~~~~~~~~AGAG-UU(U-GA)UCAU|GGCUCAGGAUGAA chl.OM270 50 CGC-UGGCGGUAUGCCU--AACACAUGCAAGUCGUACG|GAa-------- chl.OM270 100 -------guuu(uu------------------u-------)aaac----- chl.OM270 150 ----------------UUU-AGU--GGCAGACGGGUGAGUAA-CACGUGA chl.OM270 200 GA-AUCUAC-CUUU------------------------------------ chl.OM270 250 -------------------------------------------------A chl.OM270 300 GGA---------GGAGGACAACAU------------------------UU chl.OM270 350 G(GAAA)CGA-AUGCUAAUACU-CCAU-AU-------------------- chl.OM270 400 ------------------GCC-------(GCAA---)-------GGU--- chl.OM270 450 ---GAAA-----------------------UAC-------------(--- chl.OM270 500 -------gcaa------)---------|----G-UGCCUGAAGA-CGA|G chl.OM270 550 -CUCGCGC|-CUGAUUA-GCUAGUUGG-UG-GG(G-UAAAGG)-CCCACC chl.OM270 600 AA|GGCGACGAU|CAGUAGCUG|GUUU(GAGA)GAACGAUCAGC|CACAC chl.OM270 650 UGGAA(CUGAGACACG)GUCCAGA-C--UCC(UG-CG)GG-A--GGCAG- chl.OM270 700 CAGUGGGG-AAUUUUCCG-CAAU-GGGC-(-GAAA)-GCCU-GACGGA|G chl.OM270 750 CAAUACCGCGUGAGGGAUUAAGGCC(---UGUG--)GG-UU--GUAAACC chl.OM270 800 UC|UUUU-CUCAAGGAAGAA----------(---uca-a)---------- chl.OM270 850 UGACG|GU-ACUU-GAGGAA-UAAGCAUC|GGCU-AACU-CCGUG(CCA- chl.OM270 900 -GCAGCC|GCGGU---AA-)UACGGGG|GAUGCAAGCGUUAU-CCGGAAU chl.OM270 950 UAUUGGGC|GUAAAGGGUCUGUAGGUG|GCUAGAUAAG-|UCU-GUUGUU chl.OM270 1000 AAAGACUGGGGC(------------------------------------- chl.OM270 1050 ---------------------------------UUA)ACCCCAG-GA-AA chl.OM270 1100 GCAAU--GGA-AAC-U|GUU-AA-G-CUAGAG-UG|UGGUA-----GAGG chl.OM270 1150 UAGAG|GGAAUUCCUAG-UGUAGCG(GUGAAA)UGCGUAGAUA---UUAG chl.OM270 1200 GAAGAACACCGGU---GGC(GAAG)GC|G|CUCUA-CUG|GGCCA--U-- chl.OM270 1250 -------------------------------------------------- chl.OM270 1300 ----------AACUGACACU|CAG-AGACGAAAGCUAGGGUAGCAAAUGG chl.OM270 1350 G(AUU-A-GAUAC)-CCCAGUAG-|UC-CUA-GCCGUAAACGAUGGAU-- chl.OM270 1400 --AC|UA|GAUG-UUGcgua------------------(--------acu chl.OM270 1450 uga--)-------------------------------------------- chl.OM270 1500 |------------------------------|UUAUGCAGUGUU-UUAGC chl.OM270 1550 (UAAC)GCGU-UAAGUAUCC|C|GCCUGGGGAGUACACUC(GCAA)GGGU chl.OM270 1600 GAAACUCAAAGGAAUUGACGGGGGCCC-GCACA-------AGCGGU|GGA chl.OM270 1650 GCAUGUGGUUUAAUUUG-(AUGCAACG)CGAAGAACCUUACCAAGGCUUG chl.OM270 1700 ACA----UG|-UC-ACG--AA------UCUUCUU-----(GAG-A-)GGG chl.OM270 1750 AA-GAG---UG--CC---------(uucg------)---------GGAA- chl.OM270 1800 ---------------|CGUGAACA|C|AGGUGGUGCAUG|GCU|GUCGUC chl.OM270 1850 A|-G-CUCGU|GUC(GUGA)GAUGUUGGG(UUAAGU)CCCGCAACGAGCG chl.OM270 1900 CAACCCUUG|UCUUUA-G-UUACC-AUCA--------------------- chl.OM270 1950 -------------------------------------------------- chl.OM270 2000 -------------------------------------------------- chl.OM270 2050 -----------------------------(--uuuagu--)-------UG chl.OM270 2100 |GGGACUCUAGAGAGACUGCCGGU(GACAA----)--------------- chl.OM270 2150 ---------ACCGGAGGAAGGUGAGGACGACGUC-AA--GUCAGCAUGCC chl.OM270 2200 CCUUAUGCCUUGGGCUAC-ACACGUGCUACAAUGGC--UAAGACAAagag chl.OM270 2250 ca----gcaagcuu--------------------(----gcaa-)----- chl.OM270 2300 --------------aagu-uagcgaauc-ucAU-AAACUUAGUCUAAGUU chl.OM270 2350 CGGAUUGUAGGC(--UGCAACUC)GCCUACAUGAAGGCGGAAUCGCU--- chl.OM270 2400 ---AGUAAU-CGCCGG(UC--AGCAAU)ACGGCGGUGAAUCC--GUU--- chl.OM270 2450 -----------------CCCGGGCCUUGUACACACCGCCCGUCACACCAU chl.OM270 2500 GGGAGUUGG-CUACGCCCGAAGUCGUU---ACcuu-aucu-(-----ggg chl.OM270 2550 -------)-gg-a--------c-gccu-aagg-cagagcugauaacuaGG chl.OM270 2600 GUGAAGUCGUAACAAGGUAGCCGUACU(GGAA)GGUGCGGUUGGAUCACU chl.OM270 2650 CCCUU---|~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ chl.OM270 2700 ~~~~~~~~~~~~~~~~| chl.OM164 0 |~~~~~~~~~~~~~~~~~~AGAG-UU(U-GA)UCAU|GGCUCAGGAUGAA chl.OM164 50 CGC-UAUCGGUAUG-uu--AACACAUGCAAGUCGAACG|AGA-------- chl.OM164 100 --------guu(uu------------------u-------)aac------ chl.OM164 150 ----------------UCU-AGU--GGCGGACGGGUGAGUAA-CGCGUGA chl.OM164 200 GA-AUUUGC-CCCU------------------------------------ chl.OM164 250 -------------------------------------------------A chl.OM164 300 GGA---------GGGAAAUAACAU------------------------UG chl.OM164 350 G(GAAA)CCG-GUGCUAAAGUC-CCAU-AU-------------------- chl.OM164 400 ------------------ACC-------(UUUU---)-------GGU--- chl.OM164 450 ---GAAA----------------------cAGG-------------(--- chl.OM164 500 ---uca-aaaa------)---------|----CCUGCCUAGGGA-GAA|G chl.OM164 550 -CUCGCGC|-CUGAUUA-GCUAGUUGG-UG-GG(G-UAAAGG)-CCUACC chl.OM164 600 AA|GGUGACGAU|CAGUAGUUG|GUCU(GAGA)GGAUGAUCAGC|CACAC chl.OM164 650 UGGAA(CUGAGACACG)GUCCAGA-C--UCC(UA-CG)GG-A--GGCAG- chl.OM164 700 CAGUGAGG-AAUUUUCCG-CAAU-GGGC-(-GCAA)-GCCU-GACGGA|G chl.OM164 750 CAAUACCGCGUGAGGGAUGACGGCC(---UUCG--)GG-UU--GUAAACC chl.OM164 800 UC|UUUU-UUUCAGGGAGGAA---------(--guuu-c)---------- chl.OM164 850 UGACG|UGuACCU-GAAGAA-UAAGCAUC|GGCU-AACU-CCGUG(CCA- chl.OM164 900 -GCAGCC|GCGGU---AA-)GACGGAG|GAUGCAAGUGUUAU-CCGAAAU chl.OM164 950 UAUUGGGC|GUAAAGAGUCUGUAGGUG|GCUUGACAAG-|UCG-GUUGUU chl.OM164 1000 AAAUAUCAUUGC(------------------------------------- chl.OM164 1050 ---------------------------------UUA)ACUUUGA-AA-CU chl.OM164 1100 GCAUC--CGA-AAC-U|GUC-AG-G-CUCGAG-UA|GAGUC-----GAAG chl.OM164 1150 UAGAA|GGAAUUUCCAG-UGAAGCG(GUGAAA)UGCGUAGAUA---UUGG chl.OM164 1200 AAGGAACACCAAU---GGC(GAAA)GC|A|UUCUA-CUA|GGCUC--U-- chl.OM164 1250 -------------------------------------------------- chl.OM164 1300 ----------UACUGACACU|GAG-AGACGAAAGCUAGGGUAGCAAAUGG chl.OM164 1350 G(AUU-A-GAUAC)-CCCAGUAG-|UC-CUA-GCGGUAAACGAUGGAU-- chl.OM164 1400 --AC|UA|AACA-UUGCGUGu-----------------(--------auc chl.OM164 1450 gaau-)-------------------------------------------- chl.OM164 1500 |------------------------------|CCACGUGGUGUU-AUAGC chl.OM164 1550 (UAAC)GCGU-UAAGUAUCC|C|GCCUGGGGAGUACGCUC(GCAA)GGGU chl.OM164 1600 GAAACUCAAAGGAAUUGACGGGGGCCC-GCACA-------AGCGGU|GGA chl.OM164 1650 GCAUGUGGUUUAAUUUG-(AUGCAACG)CGAAGAACCUUACCAGGGUUUG chl.OM164 1700 ACA----UA|-GU-GUU--AA------UUCUUU------(GAA-A-)-AA chl.OM164 1750 AG-AAG---UG---C---------(uucg------)---------gcag- chl.OM164 1800 ---------------|acacau-A|C|AGGUGGUGCAUG|GCU|GUCGUC chl.OM164 1850 A|-G-CUCGU|GUC(GUGA)GAUGUUGGG(UUAAGU)CCCGCAACGAGCG chl.OM164 1900 CAACCCUCG|UUUUUA-G-UU----------------------------- chl.OM164 1950 -------------------------------------------------- chl.OM164 2000 -------------------------------------------------- chl.OM164 2050 -----------------------------(--gcaaga--)--------- chl.OM164 2100 |---AAUCUAAAAaGACUAUCGGU(UAUAC----)--------------- chl.OM164 2150 ---------ACCGGAGGAAGGUGAGGAUGACGUC-AA--GUCAGCAUGCC chl.OM164 2200 CCUUAUACCCUGGGCUAC-ACACGUGCUACAUUGGG-uaugGACAAUGAG chl.OM164 2250 AU----GC-caagu--------------------(----cgug-)----- chl.OM164 2300 --------------agaccgAGCUAAUC-UAA--AAACCUACUCUAAGUU chl.OM164 2350 CGGAUUGgAGGC(--UGCAACUC)GCCUCCAUGAAGUUGGAAUCGCU--- chl.OM164 2400 ---AGUAAU-CGCUGG(UC--AGCUAC)ACAGCGGUGAAUCC--GUU--- chl.OM164 2450 -----------------CCCGGGCCUUGUACACACCGCCCGUCACACCAU chl.OM164 2500 GGAAGCCGG-UUAUGCCCAAAGUCGUU---GUACC-aacca(--uu-uau chl.OM164 2550 u------)uGG-AGG-AAG-GC-GUCU-AAGG-UAGAGCUAGUGACUAGG chl.OM164 2600 GUGAAGUCGUAACAAGGUAGCCGUACU(GGAA)GGUGUGGCUGGAUCACC chl.OM164 2650 UCCUU---|~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ chl.OM164 2700 ~~~~~~~~~~~~~~~~| chl.OM153 0 |~~~~~~~~~~~~~~~~~~NGAG-UU(U-GA)UCAU|GGCUCAGGAUGAA chl.OM153 50 CGC-UGGCGGUAUGCUU--AACACAUGCAAGUCGAACG|AAA-------- chl.OM153 100 --------guu(uu------------------u-------)aac------ chl.OM153 150 ----------------UUU-AGU--GGCGAACGGGUGCGUAA-UACGUGA chl.OM153 200 GA-AUCUGC-CCUU------------------------------------ chl.OM153 250 -------------------------------------------------A chl.OM153 300 GGA---------GGAGAAUAACUU------------------------CU chl.OM153 350 G(GAAA)CGG-UUGCUAAGUCU-CCAU-AU-------------------- chl.OM153 400 ------------------GCC-------(GAGA---)-------GGU--- chl.OM153 450 ---GAAAU----------------------AGU-------------(--- chl.OM153 500 -------uuag------)---------|----ACUGCCUAGGGA-UGA|G chl.OM153 550 -CUCACGC|-CUGAUUA-GCUUGUUGG-UG-AG(G-UAAUGG)-CUCACC chl.OM153 600 AA|GGCCACGAU|CAGUAGCUG|GUUU(GAGA)GAACGAUCAGC|CACAC chl.OM153 650 UGGGA(CUGAGACACG)GCCCAGA-C--UCC(UC-CG)GG-A--GGCAG- chl.OM153 700 CAGUGAGG-AAUUUUCCG-CAAU-GGGC-(-GAAA)-GCCU-GACGGA|G chl.OM153 750 CAAUACCGCGUGAGGGAUGAAGGAU(---UUUG--)GU-CU--GUAAACC chl.OM153 800 UC|UUUU-CUCAAGAAAGAA----------(--guuc--)---------- chl.OM153 850 UGACG|GU-ACUU-GAGGAA-UAAGCAUC|GGCU-AACU-CCGUG(CCA- chl.OM153 900 -GCAGCC|GCGGU---AA-)UACGGGU|GAUGCAAGCGUUAU-CCGGAAU chl.OM153 950 CAUUGGGC|GUAAAGCGCCUGUAGGUU|GUUUAAUAAG-|UCU-GUUGUU chl.OM153 1000 AAAGACCAGGGC(------------------------------------- chl.OM153 1050 ---------------------------------UUA)ACCCUGG-GA-AA chl.OM153 1100 GCAAU--GGA-AAC-U|GCU-AG-A-CUUGAG-UA|UGAUA-----GGGG chl.OM153 1150 UAGAG|GGAAUUUCUAG-UGUAGCG(GUGAAA)UGCGUAGAUA---UUAG chl.OM153 1200 AAAGAACACCGGU---GGC(GAAN)GC|G|CUCUA-CUG|GAUCA--U-- chl.OM153 1250 -------------------------------------------------- chl.OM153 1300 ----------CACUGACACU|CAG-AGGCGAAAGCUAGGGUAGCAAAAGG chl.OM153 1350 G(AUU-A-GAUAC)-CCCUGUAG-|UC-CUA-GCCGUAAACGAUGGAU-- chl.OM153 1400 --AC|UA|CAUG-UUGC~~~~~~~~~~~~~~~~~~~~~(~~~~~~~~~~~ chl.OM153 1450 ~~~~~)~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ chl.OM153 1500 |~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~|~~~~~~~~~~~~~~~~~~ chl.OM153 1550 (~~~~)~~~~~~~~~~~~~~|~|~~~~~~~~~~~~~~~~~(~~~~)~~~~ chl.OM153 1600 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~|~~~ chl.OM153 1650 ~~~~~~~~~~~~~~~~~~(~~~~~~~~)~~~~~~~~~~~~~~~~~~~~~~ chl.OM153 1700 ~~~~~~~~~|~~~~~~~~~~~~~~~~~~~~~~~~~~~~~(~~~~~~)~~~ chl.OM153 1750 ~~~~~~~~~~~~~~~~~~~~~~~~(~~~~~~~~~~)~~~~~~~~~~~~~~ chl.OM153 1800 ~~~~~~~~~~~~~~~|~~~~~~~~|~|~~~~~~~~~~~~|~~~|~~~~~~ chl.OM153 1850 ~|~~~~~~~~|~~~(~~~~)~~~~~~~~~(~~~~~~)~~~~~~~~~~~~~ chl.OM153 1900 ~~~~~~~~~|~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ chl.OM153 1950 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ chl.OM153 2000 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ chl.OM153 2050 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~(~~~~~~~~~~)~~~~~~~~~ chl.OM153 2100 |~~~~~~~~~~~~~~~~~~~~~~~(~~~~~~~~~)~~~~~~~~~~~~~~~ chl.OM153 2150 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gu--AA--GUCAGCAUCCC chl.OM153 2200 CCUUAUGUCCUUGGCCAC-ACACGUCCUACAAUGGC--UaagACAAAGAG chl.OM153 2250 UU----ccgaacuu--------------------(----ccGA-)----- chl.OM153 2300 --------------AAGU-CAGCUAAUC-UCAU-AAACUUAGCCCAAGUU chl.OM153 2350 CGGAUUGUAGGC(--UGCAACUC)GCCUGCAUGAAGUCGGAAUCGCU--- chl.OM153 2400 ---AGUAAU-CGCUGG(UC--AGCCAU)ACAGCGGUGAAUCC--GUU--- chl.OM153 2450 -----------------CCCGGGCCUUGUACACACCGCCCGUCACACCAU chl.OM153 2500 GGGAGCUGG-UCAUGCCCGAAACCGUU---UGCUU-AACC-(-----uuu chl.OM153 2550 c------)-GG-AGA-GCG-GC-GUCU-AAGG-UAGGGUUAGUGACUGGG chl.OM153 2600 GUGAAGUCGUAACAAGGUAGCCGUACU(GGAA)GGUGUGGCUGGAUCACC chl.OM153 2650 UCCUU---|~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ chl.OM153 2700 ~~~~~~~~~~~~~~~~| chl.OM125 0 |~~~~~~~~~~~~~~~~~~AGAG-UU(U-GA)UCAU|GGCUCAGGAUGAA chl.OM125 50 CGC-UGGCGGUAUGCUU--AACACAUGCAAGUCGAACG|AAA-------- chl.OM125 100 --------guu(uu------------------u-------)aac------ chl.OM125 150 ----------------UUU-AGU--GGCGAACGGGUGAGUAA-UACGUGA chl.OM125 200 GA-AUCUGC-CCUU------------------------------------ chl.OM125 250 -------------------------------------------------A chl.OM125 300 GGA---------GAAGAAUAACUG------------------------CU chl.OM125 350 G(GAAA)CGG-CUGCUAAUACU-UCAU-AU-------------------- chl.OM125 400 ------------------GCC-------(GAGA---)-------GGU--- chl.OM125 450 ---AAAAA----------------------AGU-------------(--- chl.OM125 500 -------uuua------)---------|----ACUGCCUAAGGA-UGA|G chl.OM125 550 -CUCACGC|-CUGAUUA-GCUUGUUGG-UA-AG(G-UAAUGG)-CUUACC chl.OM125 600 AA|GGCCACGAU|CAGUAGCUG|GUUU(GAGA)GAACGAUCAGC|CACAC chl.OM125 650 UGGGA(CUGAGACACG)GCCCAGA-C--UCC(UC-CG)GG-A--GGCAG- chl.OM125 700 CAGUGAGG-AAUUUUCCG-CAAU-GGGC-(-GAAA)-GCCU-GACGGA|G chl.OM125 750 CAAUACCGCGUGAGGGAUGAAGGAU(---UUUG--)GU-CU--GUAAACC chl.OM125 800 UC|UUUU-CUCAAGAAAGAA----------(--guuc--)---------- chl.OM125 850 UGACG|GU-ACUU-GAGGAA-UAAGCAUC|GGCU-AACU-CCGUG(CCA- chl.OM125 900 -GCAGCC|GCGGU---AA-)UACGGGG|GAUGCAAGCGUUAU-CCGGAAU chl.OM125 950 CAUUGGGC|GUAAAGCGCCUGUAGGUU|GUUUAUUAAG-|UCU-GUUGUU chl.OM125 1000 AAAGCCUAGGGC(------------------------------------- chl.OM125 1050 ---------------------------------UUA)ACCCUAG-AG-AA chl.OM125 1100 GCAGU--GGA-AAC-U|GGU-AG-A-CUAGAG-UA|UGGCA-----GGGG chl.OM125 1150 UAGAG|GGAAUUUCUAG-UGUAGCG(GUGAAA)UGCGUAGAUA---UUAG chl.OM125 1200 AAAGAACACCAGC---GGC(GAAA)GC|G|CUCUA-CUG|GACCA--U-- chl.OM125 1250 -------------------------------------------------- chl.OM125 1300 ----------CACUGACACU|CAG-AGGCGAAAGCUAGGGUAGCAAAAGG chl.OM125 1350 G(AUU-A-GAUAC)-CCCUGUAG-|UC-CUA-GCCGUAAACGAUGGAU-- chl.OM125 1400 --AC|UA|GAUG-UUGUGUA------------------(-------augg chl.OM125 1450 c~~~~)~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ chl.OM125 1500 |~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~|~~~~~~~~~~~~~~~~~~ chl.OM125 1550 (~~~~)~~~~~~~~~~~~~~|~|~~~~~~~~~~~~~~~~~(~~~~)~~~~ chl.OM125 1600 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~|~~~ chl.OM125 1650 ~~~~~~~~~~~~~~~~~~(~~~~~~~~)~~~~~~~~~~~~~~~~~~~~~~ chl.OM125 1700 ~~~~~~~~~|~~~~~~~~~~~~~~~~~~~~~~~~~~~~~(~~~~~~)~~~ chl.OM125 1750 ~~~~~~~~~~~~~~~~~~~~~~~~(~~~~~~~~~~)~~~~~~~~~~~~~~ chl.OM125 1800 ~~~~~~~~~~~~~~~|~~~~~~~~|~|~~~~~~~~~~~~|~~~|~~~~~~ chl.OM125 1850 ~|~~~~~~~~|~~~(~~~~)~~~~~~~~~(~~~~~~)~~~~~~~~~~~~~ chl.OM125 1900 ~~~~~~~~~|~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ chl.OM125 1950 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ chl.OM125 2000 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ chl.OM125 2050 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~(~~~~~~~~~~)~~~~~~~~~ chl.OM125 2100 |~~~~~~~~~~~~~~~~~~~~~~~(~~~~~~~~~)~~~~~~~~~~~~~~~ chl.OM125 2150 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ chl.OM125 2200 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~uaagacaaagag chl.OM125 2250 uc----gcgaguuu--------------------(---cGUGA-)----- chl.OM125 2300 --------------GAAC-CAGCUAAUC-UCGU-AAACnUAGCCCAAGUU chl.OM125 2350 CAGAUUGUAGGC(--UGCAACUC)NCCUACAUGAAGNUGGAAUCGCU--- chl.OM125 2400 ---AGUAAU-CGCUGG(UC--AGCUAU)ACAGCGGUGAAUCC--GUU--- chl.OM125 2450 -----------------CCCGGGCCUUGUACACACCGCCCGUCACACCAU chl.OM125 2500 GGGAGCUGG-UCAUACCCAAAGUCGUU---UGCUU-AACC-(-----gun chl.OM125 2550 u------)-GG-AGA-GCU-GC-GCCU-AAGG-UAGGGCUAGUGACUAGG chl.OM125 2600 GUGAAGUCGUAACAAGGUAACCGUACU(GGAA)GGUGUGGAUGGAUCACC chl.OM125 2650 UCCUU---|~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ chl.OM125 2700 ~~~~~~~~~~~~~~~~| chl.OM081 0 |~~~~~~~~~~~~~~~~~~AGAG-UU(U-GA)UCAU|GGCUCAGGAUGAA chl.OM081 50 CGC-UAGCGGUAUGCUU--UACACAUGCAAGUCGUACG|-ga-------- chl.OM081 100 --------aaa(ga------------------a-------)auu------ chl.OM081 150 ----------------uuu-AGU--GGCGAACGGGUGAGUAA-CACGUGA chl.OM081 200 GA-AUCUAC-CUUU------------------------------------ chl.OM081 250 -------------------------------------------------A chl.OM081 300 GGA---------AGAGGAUAACAU------------------------UU chl.OM081 350 A(GAAA)CAU-UUGCUAAUACU-CUAU-AU-------------------- chl.OM081 400 ------------------GCU-------(UUAC---)-------GGU--- chl.OM081 450 ---GAAA-----------------------GAA-------------(--- chl.OM081 500 -------uuua------)---------|----UUCGCCUAAAGA-GGA|G chl.OM081 550 -CUCGCGU|-CUGAUUA-GCUAGUUGG-UA-GG(G-UAAAAG)-CCUACC chl.OM081 600 AA|GGCGACGAU|CAGUAGUUG|GUCU(GAGA)GGACGACCAGC|CACAU chl.OM081 650 UGGAA(CUGAGACACG)GUCCAGA-C--UCU(UA-CG)GG-A--GGCAG- chl.OM081 700 CAGUGAGG-AAUUUUCUG-CAAU-GGGC-(-GAAA)-GCCU-GACAGA|G chl.OM081 750 CAAUACCGCGUGAGGGAUGACUGCC(---UACG--)GG-UU--GUAAACC chl.OM081 800 UC|UUUU-CUCAAGGAGGAAG---------(---AUC--)---------- chl.OM081 850 UGACG|UU-ACUU-GAGGAA-UAAGCAUC|GGCU-AACC-CUGUG(CCA- chl.OM081 900 -GCAGCC|GCGGU---AA-)UACAGGG|GAUGCAAGUGUUAU-CCGGAAU chl.OM081 950 UAUUGGGC|GUAAAGCGUCUGUAGGUU|GAUAUUUAAG-|UCU-UUUGUU chl.OM081 1000 AAAACUUUGAGC(------------------------------------- chl.OM081 1050 ---------------------------------UUA)ACUCAAA-AA-CA chl.OM081 1100 GCAAA--AGA-AAC-U|AUU-UA-U-CUUGAG-UA|UGGUA-----GAGG chl.OM081 1150 UAAAG|GGAAUUUCCAG-UGGAGCG(GUGAAA)UGCGUAGAUA---UUGG chl.OM081 1200 AAAGAACACCAAC---AGC(GAAG)GC|A|CUUUA-CUG|GGCCA--G-- chl.OM081 1250 -------------------------------------------------- chl.OM081 1300 ----------UACUGACACU|GAG-AGACGAAAGCUAGGGUAGCAAACGG chl.OM081 1350 G(AUU-A-GAUAC)-CCCGGUAG-|UC-CUA-GCCGUAAACGAUGGAU-- chl.OM081 1400 --AC|UA|GAUG-UUGcgua------------------(-------cuuu chl.OM081 1450 uauag)-------------------------------------------- chl.OM081 1500 |------------------------------|-UAUGCAGUGUC-GUAGC chl.OM081 1550 (UAAC)GCGU-UAAGUAUCC|C|GCCUGGGAAGUAUGCUC(GCAA)GAGU chl.OM081 1600 GAAACUCAAAGGAAUUGACGGGGGCCC-GCACA-------AGCGGU|GGA chl.OM081 1650 GCAUGUGGUUUAAUUCG-(AUGCAACA)CGAAGAACCUUACCAGGACUUG chl.OM081 1700 ACA----UG|-A-agag--aag------uuuuuu-----(GAG-A-)aaa chl.OM081 1750 aa-a-----ug--ug----------cuac----------------ggcc- chl.OM081 1800 ----------------ucu-UACA|C|AGGUGGUGCAUG|GCU|GUCGUC chl.OM081 1850 A|-G-CUCGU|GUC(GUGA)GAUGUUGGG(UUAAGU)CCCGCAACGAGCG chl.OM081 1900 CAACCCUUG|UUUCUA-G-UU----------------------------- chl.OM081 1950 -------------------------------------------------- chl.OM081 2000 -------------------------------------------------- chl.OM081 2050 -----------------------------(---gaau---)--------- chl.OM081 2100 |----CUCUAGAAAGACUGCCGAU(uauaa----)--------------- chl.OM081 2150 ---------AUCGGAGGAAGGUGAGGAUGACGUC-AA--GUCAUCAUGCC chl.OM081 2200 CCUUACGUCCUGGGCUAC-ACACGUGCUACAAUGGA--UGUGACAAAAAG chl.OM081 2250 UU----GCAACUUC--------------------(----GCGA-)----- chl.OM081 2300 --------------GGAG-AAGCUAAUC-U-AU-AAACACAUCCCUAGUU chl.OM081 2350 CAGAUUGUAGGC(--UGCAACUC)GCCUACAUGAAGGUGGAAUCGCU--- chl.OM081 2400 ---AGUAAU-CGCAGG(UC--AGCUAU)ACUGCGGUGAAUCC--GUU--- chl.OM081 2450 -----------------CCCGGGCCUUGUACACACCGCCCGUCACACCAU chl.OM081 2500 GGGAGCUGG-UUAUGCCCGAAGCUAUU---AUCCU-AACC-(-----uuu chl.OM081 2550 u------)-GG-AGG-GAG-GU-AUCG-AAGG-UAGAAUUGGUGACUGGG chl.OM081 2600 GUGAAGUCGUAACAAGGUAGCCGUACU(GGAA)GGUGCGGCUGGAUCACC chl.OM081 2650 UCCUU---|~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ chl.OM081 2700 ~~~~~~~~~~~~~~~~| chl.OM039 0 |~~~~~~~~~~~~~~~~~~AGAG-UU(U-GA)UCCU|GGCUCAGAAGGAA chl.OM039 50 CGC-UGGCAGCGUGCAU--AACACAUGCAAGUCGAACG|Aug-------- chl.OM039 100 --a-agcauuc(uu------------------cg------)gaaugug-- chl.OM039 150 -g--------------aag-AGU--GGCGAACGGGUGAGGAA-CACGUAA chl.OM039 200 GA-AUCUGC-CCCU------------------------------------ chl.OM039 250 -------------------------------------------------C chl.OM039 300 GGU---------CGGGGACAACUU------------------------UU chl.OM039 350 G(GAAA)CGA-AAGCUAAUACC-CGAU-AC-------------------- chl.OM039 400 ------------------GCU-------(GUGG---)-------AGu--- chl.OM039 450 ---gaaa-----------------------GA--------------(--- chl.OM039 500 ----au-u---------)---------|-----UCGCCGAGGGA-UGA|U chl.OM039 550 -CUUGCGU|-CUGAUUA-GCUAGUUGG-UG-CG(G-UAAUGG)-CGCACC chl.OM039 600 AA|GGCGACGAU|CAGUAGCUG|GUCU(GAGA)GGAUGAACAGC|CACAU chl.OM039 650 UGGAA(CUGAGACACG)GUCCAAA-C--UCC(UA-CG)GG-A--GGCAG- chl.OM039 700 CAGUGGGG-AAUUUUCCG-CAAU-GGAC-(-GAAA)-GUCU-GACGGA|G chl.OM039 750 CGACGCUGCGUGAAGGAUGACGGCC(---UGCG--)GG-UU--GUAAACU chl.OM039 800 UC|UUUU-CUCGAAGAAGAA----------(--gcuc--)---------- chl.OM039 850 UGACG|GU-AUUC-GAGGAA-UAAGCAUC|GGCU-AACU-CCGUG(CCA- chl.OM039 900 -GCAGCC|GCGGU---AA-)GACGGAG|GAUGCAAGUGUUAU-UCGGAAU chl.OM039 950 GAUUGGGC|GUAAAGCGUCUGUAGGCU|GUAUAGAAAG-|UCU-UUUGUU chl.OM039 1000 AAAUACCUCGGC(------------------------------------- chl.OM039 1050 ---------------------------------UCA)ACCGAUA-UC-CA chl.OM039 1100 GCAAA--GGA-AAC-U|UCU-AU-A-CUUGAG-GU|AAGUA-----GAGG chl.OM039 1150 UACAG|GGAAUUCCCGG-UGGAGCG(GUGAAA)UGCGUAGAUA---UCGG chl.OM039 1200 GAGGAACANCAAU-auGGC(GAAG)GC|A|CUGUA-CUG|GGCUU--U-- chl.OM039 1250 -------------------------------------------------- chl.OM039 1300 ----------a~~~~~~~~~|~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ chl.OM039 1350 ~(~~~~~-~~~~~)-~~~~~~~~-|~~-~~~~~~~~~~~~~~~~~~~~~~ chl.OM039 1400 ~~~~|~~|~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~(-------~~~~ chl.OM039 1450 ~~~~-)~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-- chl.OM039 1500 |~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~|~~~~~~~~~~~~~~~~~~ chl.OM039 1550 (~~~~)~~~~~~~~~~~~~~|~|~~~~~~~~~~~~~~~~~(~~~~)~~~~ chl.OM039 1600 ~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~-------~~~~~~|~~~ chl.OM039 1650 ~~~~~~~~~~~~~~~~~-(~~~~~~~~)~~~~~~~~~~~~~~~~~~~~~~ chl.OM039 1700 ~~~~~~~~~|~~~~~~~--~~~----~~~~~~~~-----(~~~~~~)~~~ chl.OM039 1750 ~~~~~~~~~~~--~~~~~~~~~~~(~~~~~-----)~~~~~~~~~~~~~~ chl.OM039 1800 ~~~~~~~~~~~~~~~|~~~~~~~~|~|~~~~~~~~~~~~|~~~|~~~~~~ chl.OM039 1850 ~|~~~~~~~~|~~~(~~~~)~~~~~~~~~(~~~~~~)~~~~~~~~~~~~~ chl.OM039 1900 ~~~~~~~~~|~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ chl.OM039 1950 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ chl.OM039 2000 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ chl.OM039 2050 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~(~~~~~~~~~~)~~~~--~~~ chl.OM039 2100 |~~~~~~~~~~~~~~~~~~~~~~~(~~~~~~~~~)~~~~~~~~~~~~~~~ chl.OM039 2150 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ chl.OM039 2200 ~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ chl.OM039 2250 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~--~(--~~~~~~-)~~~~~ chl.OM039 2300 ~~~~~~~~------~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~ chl.OM039 2350 ~~~~~~~~~~~~(--~~~~~~~~)~~~~~~~~~~~~~~~~~~~~~~~~~~ chl.OM039 2400 ~~~~~~~~~~~~~~~~(~~~~~~~~~~)~~~~~~~~~~~~~~~~~~~~~~ chl.OM039 2450 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ chl.OM039 2500 ~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~(~~~~-~~~ chl.OM039 2550 ~~~~~~~)~~~~~~~-~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~ chl.OM039 2600 ~~~~~~~~~~~~~~~~~~~~~~~~~~~(~~~~)~~~~~~~~~~~~~~~~~ chl.OM039 2650 ~~~~~~~~|~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ chl.OM039 2700 ~~~~~~~~~~~~~~~~| chl.OM005 0 |~~~~~~~~~~~~~~~~~~AGAG-UU(U-GA)UCAU|GGCUCAGAAGGAA chl.OM005 50 CGC-UGGCAGCGUGCAU--AACACAUGCAAGUCGAACG|CGA-------- chl.OM005 100 --a-agaaucc(uu------------------cg------)ggauuug-- chl.OM005 150 -g--------------acg-AGU--GGCGAACGGGUGAGGAA-CACGUAA chl.OM005 200 GA-AUCU-A-CCUUu----------------------------------- chl.OM005 250 -------------------------------------------------C chl.OM005 300 GGU---------UGGGGAUAACUU------------------------CU chl.OM005 350 G(GAAA)CGG-GAGCUAAUACC-CAAU-AU-------------------- chl.OM005 400 ------------------GCU-------(GUGG---)-------AGU--- chl.OM005 450 ---GAAA-----------------------GA--------------(--- chl.OM005 500 ----Au-u---------)---------|-----UCGCCGAGAGA-CGA|u chl.OM005 550 -cuuGCGU|-CUGAUUA-GCUUGUUGG-GG-UG(G-UAAUGG)-CACACC chl.OM005 600 AA|GGCGACGAU|CAGUAGCUG|GUCU(GAGA)GGAUGGACAGC|CACAU chl.OM005 650 UGGGA(CUGAGACACG)GCCCAGA-C--UCC(UA-CG)GG-A--GGCAG- chl.OM005 700 CAGUGGGG-AAUUUUCCG-CAAU-GGAC-(-GAAA)-GUCU-GACGGA|G chl.OM005 750 CGACGCUGCGUGAAGGAUGAAGGCC(---CGUG--)GG-UU--GUAAACU chl.OM005 800 UC|UUUU-CUCGAAGAAGAa----------(-aaaaa--)---------- chl.OM005 850 ugACG|GU-AUUC-GAGGAA-UAAGCAUC|GGCU-AACU-CUGUG(CCA- chl.OM005 900 -GCAGCC|GCGGU---AA-)GACAGAG|GAUGCAAGUGUUAU-UCGGAAU chl.OM005 950 GAUUGGGC|GUAAAGAGUCUGUAGGCG|GUUUAGAAAG-|UCU-UUUGUG chl.OM005 1000 AAAUACUUCAGC(------------------------------------- chl.OM005 1050 ---------------------------------UCA)ACUGAGG-CU-CC chl.OM005 1100 GCAAA--AGA-AAC-U|UCU-AG-A-CUUGAG-GA|AAGUA-----GAGG chl.OM005 1150 UACAG|GGAAUUUCCGG-UGGAGCG(GUGAAA)UGCGUAGAUA---UCGG chl.OM005 1200 AAGGAACACCAAU-auGGC(GAAG)GC|A|CUGUA-CUG|GGCUU--U-- chl.OM005 1250 -------------------------------------------------- chl.OM005 1300 ----------UCCUGACGCU|CAG-AGACGAAAGCUGAAGGAGUGAUUAG chl.OM005 1350 G(AUU-A-GAUAC)-CCUAGUAA-|UU-UCA-GCCGUAAACGAUGAAA-- chl.OM005 1400 --AC|UC|ACUG-UCGAGC-------------------(-------caau chl.OM005 1450 auau-)-------------------------------------------- chl.OM005 1500 |------------------------------|-GGAGCGGUGGU-CAAGC chl.OM005 1550 (UAAC)GCGU-GAAGUUUUC|C|GCCUGGGGAUUACGCUU(GCAA)AAGU chl.OM005 1600 GAAACUCAAAGGAAUUGACGGGGACCC-GCACA-------AGCGGU|GGA chl.OM005 1650 GUAUGUGGUUUAAUUCG-(AUGCAACG)CGAAAAACCUUACCAGGGUUUG chl.OM005 1700 A-aauaauu|-uc-aaa--a--------cuucuu-----(GAA-A-)gag chl.OM005 1750 aa-g-c---cu--cc---------(uucg------)---------gga-- chl.OM005 1800 ---------------|UGGAAUUA|C|AGGUGGUGCAUG|GCU|GUCGUC chl.OM005 1850 A|-G-CUCGU|GUU(GUGA)AAUGUCAAG(UUAAGU)CUUGUAACGAGCG chl.OM005 1900 CAACCCAUG|UCUCUU-G-UUGC----ug--------------------- chl.OM005 1950 -------------------------------------------------- chl.OM005 2000 -------------------------------------------------- chl.OM005 2050 -----------------------------(--uuua----)-------ca chl.OM005 2100 |GUG-CUUAAGAGAAACUGCCGA-(ucaac----)--------------- chl.OM005 2150 ---------AUCGGAGGAAGGUGUGGAUGAUGUC-AA--GUCAGCAUGCC chl.OM005 2200 CCUUACAUCCUGGGCUAC-ACACGUACUACAAUGGU--CGAGACAAAGGG chl.OM005 2250 UC----GCUAACCU--------------------(----GCGA-)----- chl.OM005 2300 --------------AGGU-AUGCCAAUC-UCAU-AAACUCGAUCUCAGUU chl.OM005 2350 CGGAUUGUACUC(--UGCAACUC)GAGUACAUGAAGGUGGAAUCGCU--- chl.OM005 2400 ---AGUAAU-CGCUGG(UC--AGC-AU)ACAGCGGUGAAUAC--GUU--- chl.OM005 2450 -----------------CCCGGGUCUUGUACACACUGCCCGUCACACCAU chl.OM005 2500 GGAAGUCGA-CCCUUCCCUAAGUCGUU---ACUCG-AACC-(-----ugu chl.OM005 2550 a--aa--)-GG-ACG-AGG-AC-GCCG-AAGG-CAGAGUUGGUGACUAGG chl.OM005 2600 GUGAAGUCGUAACAAGGUAGCCGUACU(GGAA)GGUGCGGCUGGAUCACC chl.OM005 2650 UCCUU---|~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ chl.OM005 2700 ~~~~~~~~~~~~~~~~| chl.OM111 0 |~~~~~~~~~~~~~~~~~~AGAG-UU(U-GA)UCAU|GGCUCAGAAGGAA chl.OM111 50 CGC-UGGCAGCGUGCAU--AACACAUGCAAGUCGAACG|CGA-------- chl.OM111 100 --a-agaaucc(uu------------------cg------)ggauuug-- chl.OM111 150 -g--------------acg-AGU--GGCGAACGGGUGAGGAA-CACGUAA chl.OM111 200 GA-AUCU-A-CCUUu----------------------------------- chl.OM111 250 -------------------------------------------------C chl.OM111 300 GGU---------UGGGGAUAACUU------------------------CU chl.OM111 350 G(GAAA)CGG-GAGCUAAUACC-CAAU-AU-------------------- chl.OM111 400 ------------------GCU-------(GUGG---)-------AGU--- chl.OM111 450 ---GAAA-----------------------GA--------------(--- chl.OM111 500 ----Au-u---------)---------|-----UCGCCGAGAGA-CGA|u chl.OM111 550 -cuuGCGU|-CUGAUUA-GCUUGUUGG-GG-UG(G-UAAUUG)-CACACC chl.OM111 600 AA|GGCGACGAU|AAGUAGCUG|GUCU(GAGA)GGAUGGACAGC|CACAU chl.OM111 650 UGGGA(CUGAGACACG)GCCCAGA-C--UCC(UA-CG)GG-A--GGCAG- chl.OM111 700 NAGUGGGG-AAUUUUCCG-CAAU-GGAC-(-GAAA)-GUCU-GACGGA|G chl.OM111 750 CGACGCUGCGUGAUGGAUGAAGGCC(---CGUG--)GN-UU--GUAA~~~ chl.OM111 800 ~~|~~~~~~~~~~~~~~~~~~~~~~~~~~~(~~~~~~-~)~~~~~~~~~~ chl.OM111 850 ~~~~~|~~~~~~~-~~~~~~~~~~~~~~~|~~~~~~~~~~~~~~~(~~~- chl.OM111 900 -~~~~~~|~~~~~~~~~~~)~~~~~~~|~~~~~~~~~~~~~~-~~~~~~~ chl.OM111 950 ~~~~~~~~|~~~~~~~~~~~~~~~~~~|~~~~~~~~~~~|~~~~~~~~~~ chl.OM111 1000 ~~~~~~~~~~~~(~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ chl.OM111 1050 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~)~~~~~~~~~~~~~ chl.OM111 1100 ~~~~~~~~~~~~~~-~|~~~~~~~~~~~~~~~~~~|~~~~~~~~~~~~~~ chl.OM111 1150 ~~~~~|~~~~~~~~~~~~~~~~~~~(~~~~~~)~~~~~~~~~~~~~~~~~ chl.OM111 1200 ~~~~~~~~~~~~~~~~~~~(~~~~)~~|~|~~~~~~~~~|~~~~~~~~~~ chl.OM111 1250 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ chl.OM111 1300 ~~~~~~~~~~~~~~~~~~~~|~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ chl.OM111 1350 ~(~~~~~-~~~~~)-~~~~~~~~-|~~-~~~~~~~~~~~~~~~~~~~~~~ chl.OM111 1400 ~~~~|~~|~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~(-------~~~~ chl.OM111 1450 ~~~~-)~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-- chl.OM111 1500 |~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~|~~~~~~~~~~~~~~~~~~ chl.OM111 1550 (~~~~)~~~~~~~~~~~~~~|~|~~~~~~~~~~~~~~~~~(~~~~)~~~~ chl.OM111 1600 ~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~-------~~~~~~|~~~ chl.OM111 1650 ~~~~~~~~~~~~~~~~~-(~~~~~~~~)~~~~~~~~~~~~~~~~~~~~~~ chl.OM111 1700 ~~~~~~~~~|~~~~~~~--~~~----~~~~~~~~-----~~~~~~~~~~~ chl.OM111 1750 ~~~~~~~~~~~--~~~~~~~~~~~(~~~~~-----)~~~~~~~~~~~~~~ chl.OM111 1800 ~~~~~~~~~~~~~~~|~~~~~~~~|~|~~~~~~~~~~~~|~~~|~~~~~~ chl.OM111 1850 ~|~~~~~~~~|~~~(~~~~)~~~~~~~~~(~~~~~~)~~~~~~~~~~~~~ chl.OM111 1900 ~~~~~~~~~|~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ chl.OM111 1950 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ chl.OM111 2000 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ chl.OM111 2050 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~(~~~~~~~~~~)~~~~--~~~ chl.OM111 2100 |~~~~~~~~~~~~~~~~~~~~~~~(~~~~~~~~~)~~~~~~~~~~~~~~~ chl.OM111 2150 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ chl.OM111 2200 ~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ chl.OM111 2250 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~--~(--~~~~~~-)~~~~~ chl.OM111 2300 ~~~~~~~~------~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~ chl.OM111 2350 ~~~~~~~~~~~~(--~~~~~~~~)~~~~~~~~~~~~~~~~~~~~~~~~~~ chl.OM111 2400 ~~~~~~~~~~~~~~~~(~~~~~~~~~~)~~~~~~~~~~~~~~~~~~~~~~ chl.OM111 2450 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ chl.OM111 2500 ~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~(~~~~-~~~ chl.OM111 2550 ~~~~~~~)~~~~~~~-~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~ chl.OM111 2600 ~~~~~~~~~~~~~~~~~~~~~~~~~~~(~~~~)~~~~~~~~~~~~~~~~~ chl.OM111 2650 ~~~~~~~~|~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ chl.OM111 2700 ~~~~~~~~~~~~~~~~| chl.OM255 0 |~~~~~~~~~~~~~~~~~~AGAG-UU(U-GA)UCCU|GGCUCAGAAGGAA chl.OM255 50 CGC-UGGCAGCGUGCAU--AACACAUGCAAGUCGAACG|Aug-------- chl.OM255 100 --a-agcauuc(uu------------------cg------)gaaugug-- chl.OM255 150 -g--------------aag-AGU--GGCGAACGGGUGAGGAA-CACGUAA chl.OM255 200 GA-AUCUGC-CCCU------------------------------------ chl.OM255 250 -------------------------------------------------C chl.OM255 300 GGU---------CGGGGACAACUC------------------------UU chl.OM255 350 G(GAAA)CGA-GAGCUAAUACC-CGAU-AC-------------------- chl.OM255 400 ------------------GCU-------(GUGG---)-------AGU--- chl.OM255 450 ---GAAA-----------------------GA--------------(--- chl.OM255 500 ----au-u---------)---------|-----UCGCCGAGGGA-UGA|U chl.OM255 550 -CUUGCGU|-CUGAUUA-GCUAGUUGG-UG-UG(G-UAAAGG)-CAUACC chl.OM255 600 AA|GGCGACGAU|CAGUAGCUG|GUCU(GAGA)GGAUGAACAGC|CACAU chl.OM255 650 UGGAA(CUGAGACACG)GUCCAAA-C--UCC(UA-CG)GG-A--GGCAG- chl.OM255 700 CAGUGGGG-AAUUUUCCG-CANU-GGAC-(-GAAA)-GUCU-GACGGA|G chl.OM255 750 CGACGCUGCGUGAAGGAUGACGGNC(---CGCG--)GG-UU--GUAAACU chl.OM255 800 UC|UUUU-C~~~~~~~~~~~~~~~~~~~~~(~~~~~~-~)~~~~~~~~~~ chl.OM255 850 ~~~~~|~~~~~~~-~~~~~~~~~~~~~~~|~~~~~~~~~~~~~~~~~~~- chl.OM255 900 -~~~~~~|~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~ chl.OM255 950 ~~~~~~~~|~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ chl.OM255 1000 ~~~~~~~~~~~~(~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ chl.OM255 1050 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~)~~~~~~~~~~~~~ chl.OM255 1100 ~~~~~~~~~~~~~~-~|~~~~~~~~~~~~~~~~~~|~~~~~~~~~~~~~~ chl.OM255 1150 ~~~~~|~~~~~~~~~~~~~~~~~~~(~~~~~~)~~~~~~~~~~~~~~~~~ chl.OM255 1200 ~~~~~~~~~~~~~~~~~~~(~~~~)~~|~|~~~~~~~~~|~~~~~~~~~~ chl.OM255 1250 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ chl.OM255 1300 ~~~~~~~~~~~~~~~~~~~~|~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ chl.OM255 1350 ~(~~~~~-~~~~~)-~~~~~~~~-|~~-~~~~~~~~~~~~~~~~~~~~~~ chl.OM255 1400 ~~~~|~~|~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~(-------~~~~ chl.OM255 1450 ~~~~-)~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-- chl.OM255 1500 |~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~|~~~~~~~~~~~~~~~~~~ chl.OM255 1550 (~~~~)~~~~~~~~~~~~~~|~|~~~~~~~~~~~~~~~~~(~~~~)~~~~ chl.OM255 1600 ~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~-------~~~~~~|~~~ chl.OM255 1650 ~~~~~~~~~~~~~~~~~-(~~~~~~~~)~~~~~~~~~~~~~~~~~~~~~~ chl.OM255 1700 ~~~~~~~~~|~~~~~~~--~~~----~~~~~~~~-----(~~~~~~)~~~ chl.OM255 1750 ~~~~~~~~~~~--~~~~~~~~~~~(~~~~~~~~~~)~~~~~~~~~~~~~~ chl.OM255 1800 ~~~~~~~~~~~~~~~|~~~~~~~~|~|~~~~~~~~~~~~|~~~|~~~~~~ chl.OM255 1850 ~|~~~~~~~~|~~~(~~~~)~~~~~~~~~(~~~~~~)~~~~~~~~~~~~~ chl.OM255 1900 ~~~~~~~~~|~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ chl.OM255 1950 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ chl.OM255 2000 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ chl.OM255 2050 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~(~~~~~~~~~~)~~~~--~~~ chl.OM255 2100 |~~~~~~~~~~~~~~~~~~~~~~~(~~~~~~~~~)~~~~~~~~~~~~~~~ chl.OM255 2150 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ chl.OM255 2200 ~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ chl.OM255 2250 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~--~(--~~~~~~-)~~~~~ chl.OM255 2300 ~~~~~~~~------~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~ chl.OM255 2350 ~~~~~~~~~~~~(--~~~~~~~~)~~~~~~~~~~~~~~~~~~~~~~~~~~ chl.OM255 2400 ~~~~~~~~~~~~~~~~(~~~~~~~~~~)~~~~~~~~~~~~~~~~~~~~~~ chl.OM255 2450 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ chl.OM255 2500 ~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~(~~~~-~~~ chl.OM255 2550 ~~~~~~~)~~~~~~~-~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~ chl.OM255 2600 ~~~~~~~~~~~~~~~~~~~~~~~~~~~(~~~~)~~~~~~~~~~~~~~~~~ chl.OM255 2650 ~~~~~~~~|~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ chl.OM255 2700 ~~~~~~~~~~~~~~~~| chl.OM020 0 |---------nnnnnnnnnCGAG-UU(U-GA)UCCU|GGCUCAGGAUGAA chl.OM020 50 CGC-UGGCGGUAUGCCU--AAUACAUGCAAGUCGUACG|AAA-------- chl.OM020 100 --------guu(uu------------------u-------)aac------ chl.OM020 150 ----------------UUU-AGU--GGCGGACGGGUGAGUAA-CGCGUGA chl.OM020 200 GA-AUUUAC-CUUU------------------------------------ chl.OM020 250 -------------------------------------------------A chl.OM020 300 GGA---------GGGGGAUAACAG------------------------CU chl.OM020 350 G(GAAA)CGG-UUGCUAAUACC-CCAU-AU-------------------- chl.OM020 400 ------------------GCU-------(UUCG---)-------AGU--- chl.OM020 450 ---GAAAU----------------------AGA-------------(--- chl.OM020 500 -------uuua------)---------|----UCUGCCUGAAGA-GAA|G chl.OM020 550 -CUCGCGU|-CUGAUUA-GCUUGUUGG-UG-GG(G-UAAAGG)-CCUACC chl.OM020 600 AA|GGCGACGAU|CAGUAUCUG|GUUU(GAGA)GGAUGAUCAGA|CACAC chl.OM020 650 UGGAA(CUGAGACACG)GUCCAGA-C--UCC(UA-CG)GG-A--GGCAG- chl.OM020 700 CAGUAGGG-AAUUUUCCG-CAAU-GGGC-(-GAAA)-GCCU-GACGGA|G chl.OM020 750 CAAUACCGCGUGAGGGAAGACUGCC(---UAUG--)GG-UU--GUAAACC chl.OM020 800 UC|UUUU-UUCAGGGAGGAA----------(---UUU--)---------- chl.OM020 850 UGACG|UGuACCU-GAAGAA-UAAGCAUC|GGCU-AACU-CCGUG(CCA- chl.OM020 900 -GCAGCC|GCGGU---AA-)GACGGAG|GAUGCAAGUGUUAU-CCGGAAU chl.OM020 950 CACUGGGC|GUAAAGCGUCUGUAGGUG|GUUAAACAAG-|UCA-ACUGUU chl.OM020 1000 AAAUCUUGAAGC(------------------------------------- chl.OM020 1050 ---------------------------------UCA)ACUUCAA-AA-UC chl.OM020 1100 GCAGA--CGA-AAC-U|GUU-UG-A-CUAGAG-UA|UAGUA-----GGGG chl.OM020 1150 UAAAG|GGAAUUUCCAG-UGGAGCG(GUGAAA)UGCGUAGAUA---UUGG chl.OM020 1200 AAAGAACACCGAU---GGC(GAAG)GC|A|CUUUA-CUG|GGCUA--U-- chl.OM020 1250 -------------------------------------------------- chl.OM020 1300 ----------UACUGACACU|CAG-AGACGAAAGCUAGGGUAGCACAUGG chl.OM020 1350 G(AUU-A-GAUAC)-CCCAGUAG-|UC-CUA-GCCGUAAACAAUGGAU-- chl.OM020 1400 --AC|UA|GAUG-UUGUUCAg-----------------(--------auc chl.OM020 1450 gac--)-------------------------------------------- chl.OM020 1500 |------------------------------|CUGUGCAGUAUC-AAAGC chl.OM020 1550 (UAAC)GCGU-UAAGUAUCC|C|GCCUGGGAAGUAUGCUC(GCAA)GAGU chl.OM020 1600 GAAACUCAAAGGAAUUGGCGGGGGCCC-GCACA-------AGCGGU|GGA chl.OM020 1650 GCAUGUGGUUUAAUUCG-(AUGCAACG)CGAAGAACCUUACCAGGGUUUG chl.OM020 1700 ACA----UG|-AU-ACG--AA------UUUUUAU-----(GAA-A-)GUA chl.OM020 1750 AA-AAG---UG--CC---------(guuu------)---------GGAA- chl.OM020 1800 ---------------|CGUAUACA|C|AGGUGGUGCAUG|GCU|GUCGUC chl.OM020 1850 A|-G-CUCGU|GUC(GUGA)GAUGUUGGG(UGAAGU)CCCGCAACGAGCG chl.OM020 1900 CAACCCUUA|UUUUUA-G-UUGCC-------------------------- chl.OM020 1950 -------------------------------------------------- chl.OM020 2000 -------------------------------------------------- chl.OM020 2050 -----------------------------(--uuuu----)--------- chl.OM020 2100 |GGAACUCUAGAAAGACUGCCGGU(UAUAA----)--------------- chl.OM020 2150 ---------ACCGGAGGAAGGCGGGGAUGACGUC-AA--GUCAGCAUGCC chl.OM020 2200 CCUUACACCCUGGGCUAC-ACACGUGCUACAUUGGG--CGAGACAAUGAG chl.OM020 2250 AU----GCUAGUCU--------------------(----GCGA-)----- chl.OM020 2300 --------------AGAU-AAGCUAAUC-U-AU-AAACUCGUUCUAAGUU chl.OM020 2350 CGGAUUGUAGGC(--UGCAACUC)GCCUACAUGAAGGUGGAAUCGCU--- chl.OM020 2400 ---AGUAAU-CGCUGG(UC--AGCUAU)ACAGCGGUGAAUUC--GUU--- chl.OM020 2450 -----------------CCCGGGCCUUGUACACACCGCCCGUCACACCAU chl.OM020 2500 GGAAGCUGG-UUAUGCCCGAAGUCGUU---ACUCU-AACC-(-----uuu chl.OM020 2550 u------)-GG-AGG-AGG-GC-GCCU-AAGG-UAGAAUUAGUGACUGGG chl.OM020 2600 GUGAAGUCGUAACAAGGUAACCGUACU(GGAA)GGUGCGGUUGGAUCACC chl.OM020 2650 UCCUU---|~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ chl.OM020 2700 ~~~~~~~~~~~~~~~~| chl.OM021 0 |---------nnnnnnnnnAGAG-UU(U-GA)UCCU|GGCUCAGGAUGAA chl.OM021 50 CGC-UGGCGGUAUGCUU--AACACAUGCAAGUCGAACG|AAA-------- chl.OM021 100 --------guu(uu------------------u-------)aac------ chl.OM021 150 ----------------UUU-AGU--GGCGAACGGGUGCGUAA-UACGUGA chl.OM021 200 GA-AUCUUC-CCUU------------------------------------ chl.OM021 250 -------------------------------------------------A chl.OM021 300 GGA---------GGAGUAUAACUG------------------------CU chl.OM021 350 G(GAAA)CGG-CUGCUAACACU-CCAU-AU-------------------- chl.OM021 400 ------------------GUC-------(GAGA---)-------GAU--- chl.OM021 450 ---GAAAU----------------------AAU-------------(--- chl.OM021 500 ---------uu------)---------|----AUUGCCUAAGGA-UGA|G chl.OM021 550 -CUCGCGC|-CUGAUUA-GCUAGUUGG-UG-AG(G-UAAUGG)-CUCACC chl.OM021 600 AA|GGCCACGAU|CAGUAGCUG|GUUU(GAGA)GAACGAUCAGC|CACAC chl.OM021 650 UGGGA(CUGAGACACG)GCCCAGA-C--UCC(UC-CG)GG-A--GGCAG- chl.OM021 700 CAGUGAGG-AAUUUUCCG-CAAU-GGGC-(-GAAA)-GCCU-GACGGA|G chl.OM021 750 CAAUACCGCGUGAGGGAUGAAGGAU(---UUUG--)GU-CU--GUAAACC chl.OM021 800 UC|UUUU-CUCAAGAAAGAAG---------(---UUc--)---------- chl.OM021 850 UGACG|GU-ACUU-GAGGAA-UAAGCAUC|GGCU-AACU-CCGUG(CCA- chl.OM021 900 -GCAGCC|GCGGU---AA-)UACGGGG|GAUGCAAGCGUUAU-CCGGAAU chl.OM021 950 CAUUGGGC|GUAAAGCGCCUGUAGGUU|GUUUACUAAG-|UCU-GUUGUU chl.OM021 1000 AAAGACUAGGGC(------------------------------------- chl.OM021 1050 ---------------------------------UUA)ACCCUAG-AA-AA chl.OM021 1100 GCAAU--GGA-AAC-U|AAU-AG-A-CUAGAG-UA|UGGCA-----GGGG chl.OM021 1150 UAGAG|GGAAUUUCUAG-UGUAGCG(GUGAAA)UGCGUAGAUA---UUAG chl.OM021 1200 AAAGAACACCGGU---GGC(GAAA)GC|G|CUCUA-CUG|GACCA--U-- chl.OM021 1250 -------------------------------------------------- chl.OM021 1300 ----------UACUGACACU|CAG-AGGCGAAAGCUAGGGUAGCAAAAGG chl.OM021 1350 G(AUU-A-GAUAC)-CCCUGUAG-|UC-CUA-GCCGUAAACGAUGGAU-- chl.OM021 1400 --AC|UA|GAUG-UUGUGC-------------------(--------auu chl.OM021 1450 aa---)-------------------------------------------- chl.OM021 1500 |------------------------------|--GUACAGUGUC-CUAGC chl.OM021 1550 (UAAC)GCGU-UAAGUAUCC|C|GCCUGGGGAGUACGCUC(GCAA)GGGU chl.OM021 1600 GAAACUCAAAGGAAUUGACGGGGGCCC-GCACA-------AGCGGU|GGA chl.OM021 1650 GCAUGUGGUUUAAUUCG-(AUGCAACG)CGAAGAACCUUACCAGGGCUUG chl.OM021 1700 ACA----UA|-CU-ACG--AA------UUCUUUU-----(GAA-A-)AAG chl.OM021 1750 AG-AAG---UG--CC---------(uucg------)---------GGAA- chl.OM021 1800 ---------------|UGUAGAUA|C|AGGUGGUGCAUG|GCU|GUCGUC chl.OM021 1850 A|-G-CUCGU|GUC(GUGA)GAUGUUGGG(UUAAGU)CCCGCAACGAGCG chl.OM021 1900 CAACCCUUA|UUUUUA-G-UUACC-------------------------- chl.OM021 1950 -------------------------------------------------- chl.OM021 2000 -------------------------------------------------- chl.OM021 2050 -----------------------------(aauucguug-)--------- chl.OM021 2100 |GGUUCUUUAGAAAGACUGCCGGU(GACAA----)--------------- chl.OM021 2150 ---------ACCGGAGGAAGGUGAGGAUGACGUC-AA--GUCAGCAUGCC chl.OM021 2200 CCUUAUGUCCUGGGCUAC-ACACGUGCUACAAUGGU--UAAGACAAAGAG chl.OM021 2250 UC----GCGAGCUU--------------------(----GUAA-)----- chl.OM021 2300 --------------AAGU-CAGCUAAUC-UCGU-AAACUUAGCCUAAGUU chl.OM021 2350 CAGAUUGUAGGC(--UGCAACUC)GCCUGCAUGAAGUUGGAAUCGCU--- chl.OM021 2400 ---AGUAAU-CGCUGG(UC--AGCCAU)ACAGCGGUGAAUCC--GUU--- chl.OM021 2450 -----------------CCCGGGCCUUGUACACACCGCCCGUCACACCAU chl.OM021 2500 GGGAGCUGG-UCAUACCCGAAACCGUU---AGUUU-AACC-(-----guu chl.OM021 2550 u------)-GG-AGA-ACG-AC-GUCU-AAGG-UAGGGCUAGUGACUGGG chl.OM021 2600 GUGAAGUCGUAACAAGGUAGCCGUACU(GGAA)GGUGCGGCUGGAUCACC chl.OM021 2650 UCCUU---|~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ chl.OM021 2700 ~~~~~~~~~~~~~~~~| chl.OM134 0 |~~~~~~~~~~~~~~~~~~~~~~~~~(~~~~)~~~~|~~~~~~~~~~~~~ chl.OM134 50 ~~~-~~~~~~~~~~~~~~~~~~ACAUGCAAGUCGAACG|CGA-------- chl.OM134 100 -----aagaau(cc------------------uucggg--)auuugg--- chl.OM134 150 ----------------ACG-AGU--GGCGAACGGGUGAGGAA-CACGUAA chl.OM134 200 GA-AUCUAC-CUUU------------------------------------ chl.OM134 250 -------------------------------------------------C chl.OM134 300 GGU---------UGGGGAUAACUU------------------------CU chl.OM134 350 G(GAAA)CGG-GAGCUAAUACC-CAAU-AU-------------------- chl.OM134 400 ------------------GCU-------(GUGG---)-------AGU--- chl.OM134 450 ---GAAA-----------------------GA--------------(--- chl.OM134 500 -----a-uu--------)---------|-----UCGCCGAGAGA-CGA|U chl.OM134 550 -CUUGCGU|-CUGAUUA-GCUUGUUGG-GG-UG(G-UAAUGG)-CACACC chl.OM134 600 AA|GGCGACGAU|CAGUAGCUG|GUCU(GAGA)GGAUGGACAGC|CACAU chl.OM134 650 UGGGA(CUGAGACACG)GCCCAGA-C--UCC(UA-CG)GG-A--GGCAG- chl.OM134 700 CAGUGGGG-AAUUUUCCG-CAAU-GGAC-(-GAAA)-GUCU-GACGGA|G chl.OM134 750 CGACGCUGCGUGAAGGAUGAAGGCC(---CGUG--)GG-UU--GUAAACU chl.OM134 800 UC|UUUU-CUCGAAGAAGAA----------(-aaaaa--)---------- chl.OM134 850 UGACG|GU-AUUC-GAGGAA-UAAGCAUC|GGCU-AACU-CUGUG(CCA- chl.OM134 900 -GCAGCC|GCGGU---AA-)GACAGAG|GAUGCAAGUGUUAU-UCGGAAU chl.OM134 950 GAUUGGGC|GUAAAGAGUCUGUAGGCG|GUUUAGAAAG-|UCU-UUUGUG chl.OM134 1000 AAAUACUUCAGC(------------------------------------- chl.OM134 1050 ---------------------------------UCA)ACUGAGG-CU-CC chl.OM134 1100 GCAAA--AGA-AAC-U|UCU-AG-A-CUUGAG-GA|AAGUA-----GAGG chl.OM134 1150 UACAG|GGAAUUUCCGG-UGGAGCG(GUGAAA)UGCGUAGAUA---UCGG chl.OM134 1200 AAGGAACACCAAU-auGGC(GAAG)GC|A|CUGUA-CUG|GGCUU--U-- chl.OM134 1250 -------------------------------------------------- chl.OM134 1300 ----------UCCUGACGCU|CAG-AGACGAAAGCUGAAGGAGUGAUUAG chl.OM134 1350 G(AUU-A-GAUAC)-CCUAGUAA-|UU-UCA-GCCGUAAACGAUGAAA-- chl.OM134 1400 --ac|uc|acug-ucgagcc------------------(---------aa chl.OM134 1450 uau--)~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ chl.OM134 1500 |~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~|~~~~~~~~~~~~~~~~~~ chl.OM134 1550 (~~~~)~~~~~~~~~~~~~~|~|~~~~~~~~~~~~~~~~~(~~~~)~~~~ chl.OM134 1600 ~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~-------~~~~~~|~~~ chl.OM134 1650 ~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ chl.OM134 1700 ~~~~~~~~~|~~~~~~~--~~~----~~~~~~~~~~~~~(~~~~~~)~~~ chl.OM134 1750 ~~~~~~~~~~~--~~~~~~~~~~~(~~~~~~~~~~)~~~~~~~~~~~~~~ chl.OM134 1800 ~~~~~~~~~~~~~~~|~~~~~~~~|~~~~~~~~~~~~~~~~~~~~~~~~~ chl.OM134 1850 ~~~~~~~~~~~~~~(~~~~)~~~~~~~~~(~~~~~~)~~~~~~~~~~~~~ chl.OM134 1900 ~~~~~~~~~|~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ chl.OM134 1950 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ chl.OM134 2000 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ chl.OM134 2050 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~(~~~~~~~~~~)~~~~--~~~ chl.OM134 2100 |~~~~~~~~~~~~~~~~~~~~~~~(~~~~~~~~~)~~~~~~~~~~~~~~~ chl.OM134 2150 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ chl.OM134 2200 ~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ chl.OM134 2250 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~--~(--~~~~~~-)~~~~~ chl.OM134 2300 ~~~~~~~~------~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~ chl.OM134 2350 ~~~~~~~~~~~~(-~~~~~~~~~)~~~~~~~~~~~~~~~~~~~~~~~~~~ chl.OM134 2400 ~~~~~~~~~~~~~~~~(~~~~~~~~~~)~~~~~~~~~~~~~~~~~~~~~~ chl.OM134 2450 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ chl.OM134 2500 ~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-(~~~~-~~~ chl.OM134 2550 ~~~~~~~)~~~~~~~-~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~ chl.OM134 2600 ~~~~~~~~~~~~~~~~~~~~~~~~~~~(~~~~)~~~~~~~~~~~~~~~~~ chl.OM134 2650 ~~~~~~~~|~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ chl.OM134 2700 ~~~~~~~~~~~~~~~~| chl.OCS020 0 |------------------AGAG-UU(U-GA)UCCU|GGCUCAGGAUGAA chl.OCS020 50 CGC-UGGCGGUAUGCUU--AAUACAUGCAAGUCGUACG|AGA-------- chl.OCS020 100 --------gcu(uu------------------u-------)agc------ chl.OCS020 150 ----------------UCU-AGU--GGCGGACGGGUGAGUAA-CACGUGA chl.OCS020 200 GA-AUCUGC-CCUU------------------------------------ chl.OCS020 250 -------------------------------------------------A chl.OCS020 300 GGA---------GGAGGAUAACAG------------------------CU chl.OCS020 350 G(GAAA)CGG-UUGCUAAUACU-CCAU-AU-------------------- chl.OCS020 400 ------------------GCC-------(GAGA---)-------GGU--- chl.OCS020 450 ---GAAA-----------------------GGA-------------(--- chl.OCS020 500 -----u-uua-------)---------|----UCCACCUAAGGA-GGA|G chl.OCS020 550 -CUCGCGU|-CUGAUUA-GCUAGUUGG-UA-GG(G-UAAUAG)-CCUACC chl.OCS020 600 AA|GGCGACGAU|CAGUAGCUG|GUUU(GAGA)GGAUGAUCAGC|CACAC chl.OCS020 650 UGGGA(CUGAGACACG)GCCCAGA-C--UCC(UA-CG)GG-A--GGCAG- chl.OCS020 700 CAGUAGGG-AAUUUUCCG-CAAU-GGGC-(-GAAA)-GCCU-GACGGA|G chl.OCS020 750 CAAUACCGCGUGAGGGAUGACGGCC(---UGUG--)GG-UU--GUAAACC chl.OCS020 800 UC|UUUU-CUCAAGGAAGAA----------(--guuc--)---------- chl.OCS020 850 UGACG|GU-ACUU-GAGGAA-UAAGCAUC|GGCU-AACU-CUGUG(CCA- chl.OCS020 900 -GCAGCC|GCGGU---AA-)UACAGAG|GAUGCA-GCGUUAU-CCGGAAU chl.OCS020 950 CACUGGGC|AUAAAGCGUCUGUAGGUG|GUUUGGUAAG-|UCU-GCUGUU chl.OCS020 1000 AAAGACUGGGGC(------------------------------------- chl.OCS020 1050 ---------------------------------UCA)ACCCCAG-AA-AA chl.OCS020 1100 GCAGU--GGA-AAC-U|GCU-AG-A-CUUGAG-UG|UGGUA-----GAGG chl.OCS020 1150 UAGAG|GGAAUUCCUAG-UGUAGCG(GUGAAA)UGCGUAGAUA---UUAG chl.OCS020 1200 GAAGAACACCAAU---GGC(GAAG)GC|A|CUCUA-CUG|GGCCA--U-- chl.OCS020 1250 -------------------------------------------------- chl.OCS020 1300 ----------AACUGACACU|GAG-AGACGACAGCUAGGGGAGCAAAUGG chl.OCS020 1350 G(AUU-A-GAUAC)-CCCAGUAG-|UC-CUA-GCCGUAAACGAUGGAU-- chl.OCS020 1400 --AC|UA|GAUG-UUGCACG------------------(-------uauu chl.OCS020 1450 aacc-)-------------------------------------------- chl.OCS020 1500 |------------------------------|-CGUGCAGUAUC-GUAGC chl.OCS020 1550 (UAAG)GCGU-UAAGUAUCC|C|GCCUGGGAAGUACGCUC(GCAA)GAGU chl.OCS020 1600 GAAACUCAAAGGAAUUGACGGGGGCCC-GCACA-------AGCGGU|GGA chl.OCS020 1650 GUAUGUGGUUUAAUUCG-(AUGCAACG)CGAAGAACCUUACCAGGGCUUG chl.OCS020 1700 ACA----UG|-UC-ACA--AA------UCUUCCU-----(GAA-A-)GGG chl.OCS020 1750 AA-GAG---UG--CC---------(uucg------)---------GGAA- chl.OCS020 1800 ---------------|UGUGAACA|C|AGGUGGUGCAUG|GCU|GUCGUC chl.OCS020 1850 A|-G-CUCGU|GUC(GUGA)GAUGUUGGG(UUAAGU)CCCGCAACGAGCG chl.OCS020 1900 UAACCCUUG|UCUUUA-G-UUGCC-auca--------------------- chl.OCS020 1950 -------------------------------------------------- chl.OCS020 2000 -------------------------------------------------- chl.OCS020 2050 -----------------------------(--uuuagu--)-------ug chl.OCS020 2100 |GGCACUUUAAAGAGACUGCCGGU(GAUAA----)--------------- chl.OCS020 2150 ---------ACCGGAGGAAGGUGAGGACGACGUC-AA--GUCAGCAUGCC chl.OCS020 2200 CCUUACGCCCUGGGCUAC-ACACGUACUACAAUGGC--CGAGACAAAGAG chl.OCS020 2250 UC----GCAAGUUU--------------------(----GCAA-)----- chl.OCS020 2300 --------------AGAC-AAGCUAAUC-UCAU-AAACUCGGUCUCAGUU chl.OCS020 2350 CGGAUUGUAGGC(--UGCAACUC)GCCUACAUGAAGUUGGAAUCGCU--- chl.OCS020 2400 ---AGUAAU-CGCCGG(UC--AGCUAU)ACGGCGGUGAAUCC--GUU--- chl.OCS020 2450 -----------------CCCGGGCCUUGUACACACCGCCCGUCACACCAU chl.OCS020 2500 GGAAGCUGU-UCAUGCCCAAAGUCGUU---ACCUU-AACC-(------gc chl.OCS020 2550 g------)--g-AGA-GGG-GC-GCCU-AAGG-UAGGGAUAGUGACUGGG chl.OCS020 2600 GUGAAGUCGUAACAAGGUAGCCCUACU(GGAA)GGUGUGGCUGGAUCACC chl.OCS020 2650 UCCUU---|~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ chl.OCS020 2700 ~~~~~~~~~~~~~~~~| chl.OCS031 0 |------------------AGAG-UU(U-GA)UCAU|GGCUCAGGAUGAA chl.OCS031 50 CGC-UGGCGGUAUGCUU--AACACAUGCAAGUCGAACG|AAA-------- chl.OCS031 100 --------guu(uu------------------u-------)uac------ chl.OCS031 150 ----------------UUU-AGU--GGCGAACGGGUGCGUAA-UACGUGA chl.OCS031 200 GA-AUCUGC-CCUU------------------------------------ chl.OCS031 250 -------------------------------------------------A chl.OCS031 300 GGA---------GGAGGAUAACUG------------------------CU chl.OCS031 350 G(GAAA)CGG-CUGCUAACACU-CCAU-AU-------------------- chl.OCS031 400 ------------------GUC-------(GAGA---)-------GAU--- chl.OCS031 450 ---GAAA-----------------------UAA-------------(--- chl.OCS031 500 -----u-uua-------)---------|----UU-GCCUAAGGA-UGA|G chl.OCS031 550 -CUCACGC|-CUGAUUA-GCUAGUUGG-UG-AG(G-UAAUGG)-CUCACC chl.OCS031 600 AA|GGCCACGAU|CAGUAGCUG|GUUU(GAGA)GAACGAUCAGC|CACAC chl.OCS031 650 UGGGA(CUGAGACACG)GCCCAGA-C--UCC(UC-CG)GG-A--GGCAG- chl.OCS031 700 CAGUGAGG-AAUUUUCCG-CAAU-GGGC-(-GAAA)-GCCU-GACGGA|G chl.OCS031 750 CAAUACCGCGUGAGGGAUGAAGGAU(---UUUG--)GU-CU--GUAAACC chl.OCS031 800 UC|UUUU-CUCAAGAAAGAA----------(--guuc--)---------- chl.OCS031 850 UGACG|GU-ACUU-GAGGAA-UAAGCAUC|GGCU-AACU-CCGUG(CCA- chl.OCS031 900 -GCAGCC|GCGGU---AA-)UACGGGG|GAUGCAAGCGUUAU-CCGGAAU chl.OCS031 950 CAUUGGGC|GUAAAGCGCCUGUAGGUU|GUUUAAUAAG-|UCU-GUUGUU chl.OCS031 1000 AAAGCCUAGGGC(------------------------------------- chl.OCS031 1050 ---------------------------------UUA)ACCCUAG-AA-AA chl.OCS031 1100 GCAAU--GGA-AAC-U|ACU-AG-A-CUAGAG-UA|UGGCA-----GGGG chl.OCS031 1150 UAGAG|GGAAUUUCUAG-UGUAGCG(GUGAAA)UGCGUAGAUA---UUAG chl.OCS031 1200 AAAGAACACCAGU---GGC(GAAA)GC|G|CUCUA-CUG|GACCA--U-- chl.OCS031 1250 -------------------------------------------------- chl.OCS031 1300 ----------CACUGACACU|CAG-AGGCGAAAGCUAGGGUAGCAAAAGG chl.OCS031 1350 G(AUU-A-GAUAC)-CCCUGUAG-|UC-CUA-GCCGUAAACGAUGGAU-- chl.OCS031 1400 --AC|UA|GAUG-UUGUGCA------------------(----------u chl.OCS031 1450 aa---)-------------------------------------------- chl.OCS031 1500 |------------------------------|-UGUACAGUAUC-GUAGC chl.OCS031 1550 (UAAC)GCGU-UAA-UAUCC|C|GCCUGGGGAGUACGCUC(GCAA)GGGU chl.OCS031 1600 GAAACUCAAAGGAAUUGACGGGGGCCC-GCACA-------AGCGGU|GGA chl.OCS031 1650 GCAUGUGGUUUAAUUCG-(AUGCAACG)CGAAGAACCUUACCAGGGCUUG chl.OCS031 1700 ACA----U-|-ACUACG--AAu-----UCUU-ua-----(GAG-A-)uaa chl.OCS031 1750 ag-aAG---UG--CC---------(uucg------)---------GGAA- chl.OCS031 1800 ---------------|UGUAGAUA|C|AGGUGGUGCAUG|GCU|GUCGUC chl.OCS031 1850 A|-G-CUCGU|GUC(GUGA)GAUGUUGGG(UUAAGU)CCCGCAACGAGCG chl.OCS031 1900 CAACCCUUG|UUUUUA-G-UUACU-aau---------------------- chl.OCS031 1950 -------------------------------------------------- chl.OCS031 2000 -------------------------------------------------- chl.OCS031 2050 -----------------------------(--ucguu---)--------a chl.OCS031 2100 |gguuuUCUAGAAAGACUGCCGGU(GAcAA----)--------------- chl.OCS031 2150 ---------ACCGGAGGAAGGUGAGGAUGACGUC-AA--GUCAGCAUGCC chl.OCS031 2200 CCUUAUGCCCUGGGCUAC-ACACGUGCUACAAUGGU--UAAGACAAAGAG chl.OCS031 2250 UC----GC-gagcu--------------------(----cgug-)----- chl.OCS031 2300 --------------agaguCAGCUAAUC-UCAU-AAACUUAGCCUAAGUU chl.OCS031 2350 CAGAUUGUAGGC(--UGCAACUC)GCCUACAUGAAGUUGGAAUCGCU--- chl.OCS031 2400 ---AGUAAU-CGCUGG(UC--AGCCAU)ACAGCGGUGAAUCC--GUU--- chl.OCS031 2450 -----------------CCCGGGCCUUGUACACACCGCCCGUCACACCAU chl.OCS031 2500 GGGAGCUGG-UCAUACCCGAUACCGUU---UGCUU-AACC-(------AU chl.OCS031 2550 UC-----)-GG-AGA-GCG-AC-GUCU-AAGG-UAGGGCUAGUGACUGGG chl.OCS031 2600 GUGAAGUCGUAACAAGGUAGCCGUACU(GGAA)GGUGCGGCUGGAUCACC chl.OCS031 2650 UCCUU---|~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ chl.OCS031 2700 ~~~~~~~~~~~~~~~~| chl.OCS050 0 |------------------AGAG-UU(U-GA)UCAU|GGCUCAGGAUGAA chl.OCS050 50 CGC-UGGCGGUAUGCUU--AACACAUGCAAGUCGAACG|AGA-------- chl.OCS050 100 --------guu(uu------------------u-------)aac------ chl.OCS050 150 ----------------UCU-AGU--GGCGAACGGGUGCGUAA-UACGUGA chl.OCS050 200 GA-AUCUGC-CCUU------------------------------------ chl.OCS050 250 -------------------------------------------------A chl.OCS050 300 GGA---------GAAGAAUAACUA------------------------CU chl.OCS050 350 G(GAAA)CGG-UAGCUAAGUCU-UCAU-AU-------------------- chl.OCS050 400 ------------------GCC-------(GAGA---)-------GGU--- chl.OCS050 450 ---GAAA-----------------------UAG-------------(--- chl.OCS050 500 -----u-uu--------)---------|--CAACUGCCUAAGGA-UGA|G chl.OCS050 550 -CUCACGC|-CUGAUUA-GCUUGUUGG-UG-AG(G-UAACGG)-CUUACC chl.OCS050 600 AA|GGCCACGAU|CAGUAGCUG|GUUU(GAGA)GAACGAUCAGC|CACAC chl.OCS050 650 UGGGA(CUGAGACACG)GCCCAGA-C--UCC(UC-CG)GG-A--GGCAG- chl.OCS050 700 CAGUGAGG-AAUUUUCCG-CAAU-GGGC-(-GAAA)-GCCU-GACGGA|G chl.OCS050 750 CAAUACCGCGUGAGGGAUGAAGGAU(---UUUG--)GU-CU--GUAAACC chl.OCS050 800 UC|UUUU-CUCAAGAAAGAA----------(--guuc--)---------- chl.OCS050 850 UGACG|GU-ACUU-GAGGAA-UAAGCAUC|GGCU-AACU-CCGUG(CCA- chl.OCS050 900 -GCAGCC|GCGGU---AA-)UACGGGG|GAUGCAAGCGUUAU-CCGGAAU chl.OCS050 950 CAUUGGGC|GUAAAGCGCCUGUAGGUU|GUUUAGUAAG-|UCU-GUUGUU chl.OCS050 1000 AAAGACCAGGGC(------------------------------------- chl.OCS050 1050 ---------------------------------UUA)ACCCUGG-GA-AA chl.OCS050 1100 GCAAU--GGA-AAC-U|ACU-AG-A-CUUGAG-UA|UGGCA-----GGGG chl.OCS050 1150 UAGAG|GGAAUUUCUAG-UGUAGCG(GUGAAA)UGCGUAGAUA---UUAG chl.OCS050 1200 AAAGAACACCGGC---GGC(GAAA)GC|G|CUCUA-CUG|GACCA--U-- chl.OCS050 1250 -------------------------------------------------- chl.OCS050 1300 ----------UACUGACACU|CAG-AGGCGAAAGCUAGGGGAGCAAAAGG chl.OCS050 1350 G(AUU-A-GAUAC)-CCCUGUAG-|UC-CUA-GCCGUAAACGAUGGAU-- chl.OCS050 1400 --AC|UA|GAUG-UUGCGCA------------------(----------a chl.OCS050 1450 uu---)-------------------------------------------- chl.OCS050 1500 |------------------------------|-UGUGCAGUAUC-UUAGC chl.OCS050 1550 (UAAC)GCGU-UAAGUAUCC|C|GCCUGGGGAGUACGCUC(GCAA)GGGU chl.OCS050 1600 GAAACUCAAAGGAAUUGACGGGGGCCC-GCACA-------AGCGGU|GGA chl.OCS050 1650 GCAUGUGGUUUAAUUCG-(AUGCAACG)CGAAGAACCUUACCAGGGCUUG chl.OCS050 1700 ACA----UA|-CU-ACA--AA------UCUUUUC-----(GAA-A-)CGA chl.OCS050 1750 ~~~~~~~~~~~--~~~~~~~~~~~(~~~~~~~~~~)~~~~~~~~~~~~~~ chl.OCS050 1800 ~~~~~~~~~~~~~~~|~~~~~~~~|~~~~~~~~~~~~~~~~~~~~~~~~~ chl.OCS050 1850 ~~~~~~~~~~~~~~(~~~~)~~~~~~~~~(~~~~~~)~~~~~~~~~~~~~ chl.OCS050 1900 ~~~~~~~~~|~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ chl.OCS050 1950 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ chl.OCS050 2000 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ chl.OCS050 2050 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~(~~~~~~~~~~)~~~~--~~~ chl.OCS050 2100 |~~~~~~~~~~~~~~~~~~~~~~~(~~~~~~~~~)~~~~~~~~~~~~~~~ chl.OCS050 2150 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ chl.OCS050 2200 ~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ chl.OCS050 2250 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~--~(--~~~~~~-)~~~~~ chl.OCS050 2300 ~~~~~~~~------~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~ chl.OCS050 2350 ~~~~~~~~~~~~(-~~~~~~~~~)~~~~~~~~~~~~~~~~~~~~~~~~~~ chl.OCS050 2400 ~~~~~~~~~~~~~~~~(~~~~~~~~~~)~~~~~~~~~~~~~~~~~~~~~~ chl.OCS050 2450 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ chl.OCS050 2500 ~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~(~~~~-~~~ chl.OCS050 2550 ~~~~~~~)~~~~~~~-~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~ chl.OCS050 2600 ~~~~~~~~~~~~~~~~~~~~~~~~~~~(~~~~)~~~~~~~~~~~~~~~~~ chl.OCS050 2650 ~~~~~~~~|~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ chl.OCS050 2700 ~~~~~~~~~~~~~~~~| chl.OCS054 0 |------------------CGAG-UU(U-GA)UCCU|GGCUCAGGAUGAA chl.OCS054 50 CGC-UGGCGGUAUGCCU--UAUACAUGCAAGUCGUACG|AGA-------- chl.OCS054 100 --------guu(uu------------------u-------)aac------ chl.OCS054 150 ----------------UCA-AGU--GGCGGACGGGUGAGUAA-CACGUAA chl.OCS054 200 GA-AUUUAC-CUUU------------------------------------ chl.OCS054 250 -------------------------------------------------A chl.OCS054 300 GGA---------GGGGGACAACAA------------------------GU chl.OCS054 350 G(GAAA)CAG-UUGCUAAUACC-CCAU-AU-------------------- chl.OCS054 400 ------------------GCU-------(AUUA---)-------AGU--- chl.OCS054 450 ---GAAAU----------------------GAAA------------(--- chl.OCS054 500 -----u-uuu-------)---------|---UUUCGCCUAAAGA-GAA|G chl.OCS054 550 -CUUGCGG|-CUGAUUA-GCUUGUUGG-UA-GG(G-UAAUAG)-CCUACC chl.OCS054 600 AA|GGCGACGAU|CAGUAUCUG|GUUU(GAGA)GGACGAUCAGA|CACAC chl.OCS054 650 UGGAA(CUGAGACACG)GUCCAGA-C--UCC(UA-CG)GG-A--GGCAG- chl.OCS054 700 CAGUAGGG-AAUCUUCCG-CAAU-GGGC-(-GAAA)-GCCU-GACGGA|G chl.OCS054 750 CAAUACCGCGUGAGGGAUGAAUGCC(---UAUG--)GG-UU--GUAAACC chl.OCS054 800 UC|UUUU-UUCAGGGAGGAA----------(--uaaa--)---------- chl.OCS054 850 UGACG|UGuACCU-GAAGAA-UAAGCAUC|GGCU-AACU-CCGUG(CCA- chl.OCS054 900 -GCAGCC|GCGGU---AA-)GACGGAG|GAUGCAAGUGUUAU-CCGGAAU chl.OCS054 950 CACUGGGC|GUAAAGCGUCUGUAGGUG|GCACAGUAAG-|UCA-ACUGUU chl.OCS054 1000 AAAUCUUGAAGC(------------------------------------- chl.OCS054 1050 ---------------------------------UCA)ACUUCAA-AC-UU chl.OCS054 1100 GCAGU--CGA-AAC-U|AUU-GA-G-CUAGAG-UA|UAGUA-----GAGG chl.OCS054 1150 UAAAG|GGAAUUUCCAG-UGGAGCG(GUGAAA)UGCGUAGAGA---UUGG chl.OCS054 1200 AAAGAACACCGAU---GGC(GAAG)GC|A|CUUUA-CUG|GGCUA--U-- chl.OCS054 1250 -------------------------------------------------- chl.OCS054 1300 ----------UACUGACACU|CAG-AGACGAAAGCUAGGGUAGCAAAUGG chl.OCS054 1350 G(AUU-A-GAUAC)-CCCAGUAG-|UC-CUA-GCUGUAAACAAUGGAU-- chl.OCS054 1400 --AC|UA|GGUG-UUGAACA------------------(-------gauu chl.OCS054 1450 gaac-)-------------------------------------------- chl.OCS054 1500 |------------------------------|-UGUGCAGUACU-AAAGC chl.OCS054 1550 (UAAC)GCGU-UAAGUAUCC|C|GCCUGGGAAGUAUGCUC(GCAA)GAGU chl.OCS054 1600 GAAACUCAAAGGAAUUGACGGGGGCCC-GCACA-------AGUGGU|GGA chl.OCS054 1650 GCAUGUGGUUUAAUUCG-(AUGCAACG)CGAAGAACCUUACCAGGGUUUG chl.OCS054 1700 ACA----UG|-AU-ACG--AAU----UUCUU--u-----(GAA-A-)aaa chl.OCS054 1750 ga-aag---ug--cc---------(uuuu------)---------ggaa- chl.OCS054 1800 ---------------|CGUAUACA|C|AGGUGGUGCAUG|GCU|GUCGUC chl.OCS054 1850 A|-G-CUCGU|GUC(GUGA)GAUGUUGGG(UUAAGU)CCCGCAACGAGCG chl.OCS054 1900 CAACCCUUA|UUUUUA-G-UUGCC-------------------------- chl.OCS054 1950 -------------------------------------------------- chl.OCS054 2000 -------------------------------------------------- chl.OCS054 2050 -----------------------------(---uuuu---)--------- chl.OCS054 2100 |GGAACUCUAAAAAGACUGCCGGU(UAUAA----)--------------- chl.OCS054 2150 ---------ACCGGAGGAAGGCGGGGAUGACGUC-AA--GUCAGCAUGCC chl.OCS054 2200 CCUUACACCCUGGGCUAC-ACACGUGCUACAAUGGG--CGAGACAAUGAG chl.OCS054 2250 UC----GCAAGUCC--------------------(----GCGA-)----- chl.OCS054 2300 --------------GGAU-UAGCUAAUC-U-AU-AAACUCGUUCUAAGUU chl.OCS054 2350 CGGAUUGUAGGC(--UGCAACUC)GCCUGCAUGAAGUUGGAAUCGCU--- chl.OCS054 2400 ---AGUAAU-CGCUGG(UC--AGCUAC)ACAGCGGUGAAUUC--GUU--- chl.OCS054 2450 -----------------CCCGGGCCUUGUACACACCGCCCGUCACACCAU chl.OCS054 2500 GGAAGCUGG-UUAUACCCGAAGUCGUU---ACUCU-AACC-(------UU chl.OCS054 2550 UUU----)-GG-AGG-GGG-AU-GCCU-AAGG-UAGAAUUAGUGACUGGG chl.OCS054 2600 GUGAAGUCGUAACAAGGUAACCGUACU(GGAA)GGUGCGGUUGGAUCACC chl.OCS054 2650 UCCUU---|~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ chl.OCS054 2700 ~~~~~~~~~~~~~~~~| chl.OCS056 0 |------------------AGAG-UU(U-GA)UCCU|GGCUCAGGAUGAA chl.OCS056 50 CGC-UGGCGGUAUGCCU--AACACAUGCAAGUCGUACG|AGG-------- chl.OCS056 100 --------guu(uc------------------a-------)uac------ chl.OCS056 150 ----------------CCA-AGU--GGCGGACGGGUGAGUAA-CACGUGA chl.OCS056 200 GA-AUUUAC-CCUA------------------------------------ chl.OCS056 250 -------------------------------------------------A chl.OCS056 300 GGA---------GGGGGACAACAA------------------------CU chl.OCS056 350 G(GAAA)CGG-UUGCUAAAACC-CCAU-AU-------------------- chl.OCS056 400 ------------------GCU-------(UUCG---)-------AGU--- chl.OCS056 450 ---GAAAU----------------------AGA-------------(--- chl.OCS056 500 -----u-uua-------)---------|----UCUGCCUUAGGA-AAA|G chl.OCS056 550 -CUCGCGG|-CUGAUUA-GCUAGUUGG-UA-AG(G-UAAUGG)-CUUACC chl.OCS056 600 AA|GGCGACGAU|CAGUAUCUG|GUUU(GAGA)GGACGAUCAGA|CACAC chl.OCS056 650 UGGAA(CUGAGACACG)GUCCAGA-C--UCC(UA-CG)GG-A--GGCAG- chl.OCS056 700 CAGUGGGG-AAUUUUCCG-CAAU-GGGC-(-GAAA)-GCCU-GACGGA|G chl.OCS056 750 CAAUACCGCGUGAAGGAAGACGGCC(---UAUG--)GG-UU--GUAAACU chl.OCS056 800 UC|UUUU-UUCAGGGAGGAA----------(-cucaa--)---------- chl.OCS056 850 UGACG|UGuACCU-GAAGAA-UAAGCAUC|GGCU-AACU-CCGUG(CCA- chl.OCS056 900 -GCAGCC|GCGGU---AA-)GACGGAG|GAUGCAAGUGUUAU-CCGGAAU chl.OCS056 950 CACUGGGC|GUAAAGCGUCUGUAGGUG|GUUUAGUAAG-|UCG-ACUGUU chl.OCS056 1000 AAAUC~~~~~~~(~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ chl.OCS056 1050 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~)~~~~~~~~~~~~~ chl.OCS056 1100 ~~~~~~~~~~~~~~-~|~~~~~~~~~~~~~~~~~~|~~~~~~~~~~~~~~ chl.OCS056 1150 ~~~~~|~~~~~~~~~~~~~~~~~~~(~~~~~~)~~~~~~~~~~~~~~~~~ chl.OCS056 1200 ~~~~~~~~~~~~~~~~~~~(~~~~)~~|~|~~~~~~~~~|~~~~~~~~~~ chl.OCS056 1250 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ chl.OCS056 1300 ~~~~~~~~~~~~~~~~~~~~|~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ chl.OCS056 1350 ~(~~~~~-~~~~~)-~~~~~~~~-|~~-~~~~~~~~~~~~~~~~~~~~~~ chl.OCS056 1400 ~~~~|~~|~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~(-------~~~~ chl.OCS056 1450 ~~~~-)~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ chl.OCS056 1500 |~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~|~~~~~~~~~~~~~~~~~~ chl.OCS056 1550 (~~~~)~~~~~~~~~~~~~~|~|~~~~~~~~~~~~~~~~~(~~~~)~~~~ chl.OCS056 1600 ~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~-------~~~~~~|~~~ chl.OCS056 1650 ~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ chl.OCS056 1700 ~~~~~~~~~|~~~~~~~--~~~----~~~~~~~~~~~~~(~~~~~~)~~~ chl.OCS056 1750 ~~~~~~~~~~~--~~~~~~~~~~~(~~~~~~~~~~)~~~~~~~~~~~~~~ chl.OCS056 1800 ~~~~~~~~~~~~~~~|~~~~~~~~|~~~~~~~~~~~~~~~~~~~~~~~~~ chl.OCS056 1850 ~~~~~~~~~~~~~~(~~~~)~~~~~~~~~(~~~~~~)~~~~~~~~~~~~~ chl.OCS056 1900 ~~~~~~~~~|~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ chl.OCS056 1950 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ chl.OCS056 2000 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ chl.OCS056 2050 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~(~~~~~~~~~~)~~~~--~~~ chl.OCS056 2100 |~~~~~~~~~~~~~~~~~~~~~~~(~~~~~~~~~)~~~~~~~~~~~~~~~ chl.OCS056 2150 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ chl.OCS056 2200 ~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ chl.OCS056 2250 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~--~(--~~~~~~-)~-~~~ chl.OCS056 2300 ~~~~~~~~------~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~ chl.OCS056 2350 ~~~~~~~~~~~~(-~~~~~~~~~)~~~~~~~~~~~~~~~~~~~~~~~~~~ chl.OCS056 2400 ~~~~~~~~~~~~~~~~(~~~~~~~~~~)~~~~~~~~~~~~~~~~~~~~~~ chl.OCS056 2450 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ chl.OCS056 2500 ~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~(~~~~-~~~ chl.OCS056 2550 ~~~~~~~)~~~~~~~-~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~ chl.OCS056 2600 ~~~~~~~~~~~~~~~~~~~~~~~~~~~(~~~~)~~~~~~~~~~~~~~~~~ chl.OCS056 2650 ~~~~~~~~|~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ chl.OCS056 2700 ~~~~~~~~~~~~~~~~| chl.OCS162 0 |------------------AGAG-UU(U-GA)UCAU|GGCUCAGGAUGAA chl.OCS162 50 CGC-UGGCGGCAUGCUU--AACACAUGCAAGUCGAACG|GUU-------- chl.OCS162 100 -----uuuauu(uu------------------cuucggag)aauaaa--- chl.OCS162 150 ----------------GAU-AGU--GGCGGACGGGUGAGUAA-CGCGUAA chl.OCS162 200 GA-ACCUAC-CCUU------------------------------------ chl.OCS162 250 -------------------------------------------------A chl.OCS162 300 AGA---------GGGGGACAACAG------------------------UU chl.OCS162 350 G(GAAA)CGA-CUGCUAAUACC-CCAU-AA-------------------- chl.OCS162 400 ------------------GCU-------(GAGG---)-------AGU--- chl.OCS162 450 ---UAAA-----------------------CGAAUC----------(--- chl.OCS162 500 -----u-uu--------)---------|-GAUUCGGCUUAAGGA-GGG|G chl.OCS162 550 -CUUGCGU|-CUGAUUA-GCUAGUUGG-UA-AG(G-UAAAUG)-CUUACC chl.OCS162 600 AA|GGCGACGAU|CAGUAGCUG|GUUU(GAGA)GGAUGAUCAGC|CACAC chl.OCS162 650 UGGGA(CUGAGACACG)GCCCAGA-C--UCC(AA-CG)GG-A--GGCAG- chl.OCS162 700 CAGUGGGG-AAUUUUCCG-CAAU-GGGC-(-GAAA)-GCCU-GACGGA|G chl.OCS162 750 CAAUGCCGCGUGGAGGAAGACGGCC(---CGUG--)GG-UU--GUAAACU chl.OCS162 800 CC|UUUU-CUCAGAGAAGAA----------(--gcuc--)---------- chl.OCS162 850 UGACG|GU-AUCU-GAGGAA-UAAGCAUC|GGCU-AACU-CCGUG(CCA- chl.OCS162 900 -GCAGCC|GCGGU---AA-)UACGGAG|GAUGCAAGCGUUAU-CCGGAAU chl.OCS162 950 CAUUGGGC|GUAAAGCGUCUGUAGGUG|GUUUUGUAAG-|UCC-GCUGUA chl.OCS162 1000 AAAGAGUACAGC(------------------------------------- chl.OCS162 1050 ---------------------------------UUA)ACUGUAU-AU-GG chl.OCS162 1100 GCAGU--GGA-AAC-U|ACA-AG-A-CUGGAG-UG|UGGUA-----GGGG chl.OCS162 1150 UAGAG|GGAAUUCCCGG-UGUAGCG(GUGAAA)UGCGUAGAUA---UCGG chl.OCS162 1200 GAAGAACACCAAC---GGC(GAAA)GC|A|CUCUA-CUG|GGCCA--A-- chl.OCS162 1250 -------------------------------------------------- chl.OCS162 1300 ----------CACUGACACU|GAG-AGACGAAAGCUAAGGGAGCGAAAAG chl.OCS162 1350 G(AUU-A-GAUAC)-CCUUGUAG-|UC-UUA-GCCGUAAACGAUGGAU-- chl.OCS162 1400 --AC|UA|AGUG-GUGCGCG------------------(-------uauu chl.OCS162 1450 caug-)-------------------------------------------- chl.OCS162 1500 |------------------------------|-CCUGCACUGCU-GUAGC chl.OCS162 1550 (UAAC)GCGU-UAAGUAUCC|C|GCCUGGGGAGUAUGCUC(GCAA)GGGU chl.OCS162 1600 GAAACUCAAAGGAAUUGACGGGGGCCC-GCACA-------AGCGGU|GGA chl.OCS162 1650 GCAUGUGGUUUAAUUCG-(AUGCAACG)CGAAGAACCUUACCAGGGCUUG chl.OCS162 1700 ACA----UG|-CC-ACG--AAA-----UCUUUCA-----(GAG-A-)UGA chl.OCS162 1750 GA-GAG---UG--CC---------(uucg------)---------GGAA- chl.OCS162 1800 ---------------|CGUGGACA|C|AGGUGGUGCAUG|GCU|GUCGUC chl.OCS162 1850 A|-G-CUCGU|GUC(GUGA)GAUGUUGGG(UUAAGU)CCCGCAACGAGCG chl.OCS162 1900 CAACCCUUA|UCUUUA-G-UU----------------------------- chl.OCS162 1950 -------------------------------------------------- chl.OCS162 2000 -------------------------------------------------- chl.OCS162 2050 -----------------------------(--aaaaaca-)--------- chl.OCS162 2100 |---ACUCUAGAGAGACUGCCAGU(GAUAA----)--------------- chl.OCS162 2150 ---------ACUGGAGGAAGGUGAGGAUGACGUC-AA--GUCAGCAUGCC chl.OCS162 2200 CCUUACGCCCUGGGCUAC-ACACGUGCUACAAUGGU--UAGGACAAAGAG chl.OCS162 2250 AU----GCUAACUC--------------------(----GCGA-)----- chl.OCS162 2300 --------------GAGC-AAGCUAACC-UCAA-AAACCUAAUCUCAGUU chl.OCS162 2350 CGGAUUGCAGGC(--UGCAACUC)GCCUGCAUGAAGGUGGAAUCGCU--- chl.OCS162 2400 ---AGUAAU-CGCAGG(UC--AGCCAU)ACUGCGGUGAAUUC--GUU--- chl.OCS162 2450 -----------------CCCGGGCCUUGUACACACCGCCCGUCACACCAU chl.OCS162 2500 GGGAGCUGG-CUAUGCCCAAAGUUGUU---ACCCU-AACC-(-------U chl.OCS162 2550 UCG----)-GG-AGG-GGG-AU-GCCU-AAGG-CAGAGCUGGUGACUAGG chl.OCS162 2600 GUGAAGUCGUAACAAGGUAGCCGUACU(GGAA)GGUGCGGCUGGAUCACC chl.OCS162 2650 UCCUU---|~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ chl.OCS162 2700 ~~~~~~~~~~~~~~~~| chl.OCS182 0 |------------------AGAG-UU(U-GA)UCAU|GGCUCAGAAGGAA chl.OCS182 50 CGC-UGGCAGCGUGCAU--AACACAUGCAAGUCGAACG|GGA-------- chl.OCS182 100 --u-uauuauc(uu------------------cg------)gaugaua-- chl.OCS182 150 -u--------------GAG-AGU--GGCGAACGGGUGAGUAA-CACGUAA chl.OCS182 200 GA-AUCUAC-CUUU------------------------------------ chl.OCS182 250 -------------------------------------------------A chl.OCS182 300 GGA---------CGGGGAUAACUU------------------------CU chl.OCS182 350 G(GAAA)CGG-AUGCUAAUACC-CGAU-AU-------------------- chl.OCS182 400 ------------------GCU-------(GUGG---)-------AGU--- chl.OCS182 450 ---GAAA-----------------------GGA-------------(--- chl.OCS182 500 -----a-uu--------)---------|----UC-GCCUAAAGA-UGA|U chl.OCS182 550 -CUUGCGU|-CUGAUUA-GCUAGAUAG-UG-UG(G-UAAUGG)-CGCACU chl.OCS182 600 AU|GGCGACGAU|CAGUAGCUG|GUCU(GAGA)GGAUGGACAGC|CACAU chl.OCS182 650 UGGAA(CUGAGACACG)GUCCAAA-C--UCC(UA-CG)GG-A--GGCAG- chl.OCS182 700 CAGUGGGG-AAUUUUCCG-CAAU-GGGC-(-GAAA)-GCCU-GACGGA|G chl.OCS182 750 CGACGCUGCGUGAAGGAUGACGGCC(---UGCG--)GG-UU--GUAAACU chl.OCS182 800 UC|UUUU-CUCGAAGAAGAA----------(--uaaa--)---------- chl.OCS182 850 UGACG|GU-AUUC-GAGGAA-UAAGCAUC|GGCU-AACU-CUGUG(CCA- chl.OCS182 900 -GCAGCC|GCGGU---AA-)GACAGAG|GAUGCAAGUGUUAU-UCGGAUU chl.OCS182 950 GAUUGGGC|GUAAAGCGUCUGUAGGCG|GUUUGGAAAG-|UCU-UUUGUG chl.OCS182 1000 AAAUUCUUCAGC(------------------------------------- chl.OCS182 1050 ---------------------------------UCA)ACUGGGG-GU-CC chl.OCS182 1100 GCAAA--AGA-AAC-U|UCU-AG-G-CUUGAG-GG|AAGUA-----GAGG chl.OCS182 1150 UACAG|GGAAUUUCCGG-UGGAGCG(GUGAAA)UGCGUAGAUA---UCGG chl.OCS182 1200 AAGGAACACCAAU-auGGC(GAAG)GC|A|CUGUA-CUG|GGCUU--U-- chl.OCS182 1250 -------------------------------------------------- chl.OCS182 1300 ----------ACCUGACGCU|AAG-AGACGAAAGCUAAAGGAGUGAUUAG chl.OCS182 1350 G(AUU-A-GAUAC)-CCUAGUAA-|UU-UUA-GCCGUAAACGAUGGAA-- chl.OCS182 1400 --AC|UC|ACUG-CCGAGCC------------------(-------ggua chl.OCS182 1450 uuc--)-------------------------------------------- chl.OCS182 1500 |------------------------------|-GGAGCGGUGGU-CAAGC chl.OCS182 1550 (UAAC)GCGU-GAAGUUUCC|C|GCCUGGGGACUACGCAU(GCAA)AUGU chl.OCS182 1600 GAAACUCAAAGGAAUUGACGGGGACCC-GCACA-------AGCGGU|GGA chl.OCS182 1650 GUAUGUGGUUUAAUUCG-(AUGCAACG)CGAAAAACCUUACCAAGGUUUG chl.OCS182 1700 Aaa----UC|-AU-UUC--AAA-----ACUCUUU-----(GAA-A-)-GA chl.OCS182 1750 AG-agc---CU--CC---------(uucg------)---------GGA-- chl.OCS182 1800 ---------------|ugGAAUGA|C|AGGUGGUGCAUG|GCU|GUCGUC chl.OCS182 1850 A|-G-CUCGU|GUU(GUGA)AAUGUCAAG(UUAAGU)CUUGUAACGAGCG chl.OCS182 1900 CAACCCAUG|UCUUUU-G-UUGCU---G---------------------- chl.OCS182 1950 -------------------------------------------------- chl.OCS182 2000 -------------------------------------------------- chl.OCS182 2050 -----------------------------(--uuua----)--------C chl.OCS182 2100 |AGUGCUUAAAAGAGACUGCCGC-(UCUAC----)--------------- chl.OCS182 2150 ---------AGCGGAGGAAGGUGUGGAUGAUGUC-AA--GUCAGCAUGCC chl.OCS182 2200 CCUUAUAUCUUGGGCUAC-ACACGUACUACAAUGGU--AGGGACAAUGAG chl.OCS182 2250 UC----GCAAACCU--------------------(----GCGA-)----- chl.OCS182 2300 --------------AGGC-UAGCCAAUC-UCAA-AAACCCUAUCUCAGUU chl.OCS182 2350 CGGAUUGUACUC(--UGCAACUC)GAGUGCAUGAAGGUGGAAUCGCU--- chl.OCS182 2400 ---AGUAAU-CGCUGG(UC--AGC-AU)ACAGCGGUGAAUAC--G-U--- chl.OCS182 2450 -----------------CCCGGGUCUUGUACACACUGCCCGUCACAC-au chl.OCS182 2500 GGAAGUCGA-UCCUUCCCUAAGUCGUU---ACUCG-AACC-(------UU chl.OCS182 2550 UUA----)-GG-ACG-AGG-AU-GCCG-AAGG-CAGGGUUGGUGACUANG chl.OCS182 2600 GUGAAGUCCUAACAAGGUAGCCGUACU(GGAA)GGUGUGGCUGGAUCACC chl.OCS182 2650 UCCUU---|~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ chl.OCS182 2700 ~~~~~~~~~~~~~~~~| 2.11.2.1.1 0 x~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~ 2.11.2.1.1 50 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 2.11.2.1.1 100 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~ 2.11.2.1.1 150 ~~~~~~---------~~~~~~~~--~~~~~~~~~~~~~~~~~-~~~~~~~ 2.11.2.1.1 200 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 2.11.2.1.1 250 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~ 2.11.2.1.1 300 ~~~---------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 2.11.2.1.1 350 ~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~-------------------- 2.11.2.1.1 400 -------~~~~~~~~~~~~~~~------~~~~~~~-~~------~~~~~~ 2.11.2.1.1 450 ~~~~~~~~~~~~------------------~~~~~~~~~~~~~~~~~~~~ 2.11.2.1.1 500 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~ 2.11.2.1.1 550 -~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~ 2.11.2.1.1 600 ~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 2.11.2.1.1 650 ~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~-~~~~~-~--~~~~~~ 2.11.2.1.1 700 ~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~-~~~~~~~~~~-~~~~~~~~ 2.11.2.1.1 750 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~--~~~~~~~ 2.11.2.1.1 800 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 2.11.2.1.1 850 ~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~ 2.11.2.1.1 900 ~~~~~~~-~~~~~---~~-~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~ 2.11.2.1.1 950 ~~~~~~~~|~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~-~~~~~~ 2.11.2.1.1 1000 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 2.11.2.1.1 1050 ~~~~~~~~~~~~~~~~~~~~~~~~---------~~~~~~~~~~~~~~-~~ 2.11.2.1.1 1100 ~~~~~--~~~~~~~~~-~~~-~~-~-~~~~~~-~~~~~~~~~----~~~~ 2.11.2.1.1 1150 ~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~ 2.11.2.1.1 1200 ~~~~~~~~~~~~~~--~~~~~~~~~~~-~-~~~~~-~~~~~~~~~--~~~ 2.11.2.1.1 1250 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~- 2.11.2.1.1 1300 ----------~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 2.11.2.1.1 1350 ~~~~~-~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~-- 2.11.2.1.1 1400 --~~-~~~~~~~-~~~~~~~~~~~~~~-----------~--------~~~ 2.11.2.1.1 1450 ~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------------- 2.11.2.1.1 1500 --------------------------------~~~~~~~~~~~~-~~~~~ 2.11.2.1.1 1550 ~~~~~~~~~~-~~~~~~~~~~~|~~~~~~~~~~~~~~~~~~~~~~~~~~~ 2.11.2.1.1 1600 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~ 2.11.2.1.1 1650 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 2.11.2.1.1 1700 ~~~~---~~|~~~-~~~~~~~------~~~~~~~~~---~~~~-~~~~~~ 2.11.2.1.1 1750 ~~-~~~~~~~~~~~~~~-------~~~~~~-----~~--------~~~~~ 2.11.2.1.1 1800 ~~-------------~~~~~~~~~|~~~~~~~~~~~~~~~~~~-~~~~~~ 2.11.2.1.1 1850 ~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 2.11.2.1.1 1900 ~~~~~~~~~~~~~~~~-~~~~~~~-~~~~~-~~~~~~~~~~~~~~~~~~~ 2.11.2.1.1 1950 ~~~~~~~~~----------------------------------------- 2.11.2.1.1 2000 -------------------------------------------------- 2.11.2.1.1 2050 -----------------------------~--~~~~~---~~~~~~~~~~ 2.11.2.1.1 2100 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~-------~~~~~~~ 2.11.2.1.1 2150 ~~~------~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~ 2.11.2.1.1 2200 ~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~ 2.11.2.1.1 2250 ~~~---~~~~~~~~--------------------~----~~~~-~-~~~~ 2.11.2.1.1 2300 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~ 2.11.2.1.1 2350 ~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--- 2.11.2.1.1 2400 ---~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~-~~~~-- 2.11.2.1.1 2450 -----------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 2.11.2.1.1 2500 ~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~ 2.11.2.1.1 2550 ~~~~~--~~~~-~~~~~~~~~~~~~~~-~~~~-~~~~~~~~~~~~~~~~~ 2.11.2.1.1 2600 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 2.11.2.1.1 2650 ~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 2.11.2.1.1 2700 ~~~~~~~~~~~~~~~~| env.OM19 0 ...................CGAG-UU(U-GA)UCAU|GGCUCAGGAUGAA env.OM19 50 CGC-UGGCGGUAUGCCU--AACACAUGCAAGUCGUACG-AG--------- env.OM19 100 -------AGUU(UU------------------U-------)AACU----- env.OM19 150 -----|----------CA--AGU--GGCGGACGGGUGAGUAA-CACGUGA env.OM19 200 GA-AUUUGC-CUUU------------------------------------ env.OM19 250 -------------------------------------------------A env.OM19 300 GGA---------GGGGGAUAACAG------------------------AG env.OM19 350 U(GAAA)ACG-CUGCUAAUACC-CCAU-AU-------------------- env.OM19 400 ------------------GCU-------(UUCU---)-------AGU--- env.OM19 450 ---GAAAU----------------------GGA-------------(--- env.OM19 500 -------UUUA------)---------|----UUCGCCUAAAGA-GAA|G env.OM19 550 -CUCGCGG|-CUGAUUA-GCUUGUUGG-UA-AG(G-UAAUGG)-CUUACC env.OM19 600 AA|GGCGACGAU-CAGUAUCUG|GUUU(GAGA)GGACGAUCAGA|CACAC env.OM19 650 UGGAA(CUGAGACACG)GUCCAG....-...(..-..)..-.--...... env.OM19 700 ..................-..........(-....).....-......|. env.OM19 750 .........................(..-......).....--....... env.OM19 800 ..|...........................(........).......... env.OM19 850 .....-.................................-.....(.... env.OM19 900 .......-.....---..-).......|..............-....... env.OM19 950 ........|..................|..........-|...-...... env.OM19 1000 ............(..................................... env.OM19 1050 ........................---------...)..........-.. env.OM19 1100 .....--.........-...-..-.-......-.........----.... env.OM19 1150 .....|...........-.......(......)..........---.... env.OM19 1200 ..............--...(....)..-.-.....-.........--... env.OM19 1250 .................................................- env.OM19 1300 ----------..........-............................. env.OM19 1350 .(...-.......).........--.......................-- env.OM19 1400 --..-..|....-..............-----------(--------... env.OM19 1450 ..---)...............................------------- env.OM19 1500 --------------------------------............-..... env.OM19 1550 (....)....-.........|.|.................(....).... env.OM19 1600 ..............................................-... env.OM19 1650 ..................(........)...................... env.OM19 1700 ....---..|...-.......------.........---(...-..)... env.OM19 1750 ..-..............-------(.....-----).--------..... env.OM19 1800 ..-------------|........|.|............|...-...... env.OM19 1850 .|..-.....|...(....).........(......)............. env.OM19 1900 .........|......-.......-.....-................... env.OM19 1950 .........----------------------------------------- env.OM19 2000 -------------------------------------------------- env.OM19 2050 -----------------------------(--.....---)......... env.OM19 2100 |GGAACUCUAGAAAGACUGCUGGU(UAUAA----)--------------- env.OM19 2150 ---------ACCGGAGGAAGGCGGGGAUGACGUC-AA--GUCAGCAUGCC env.OM19 2200 CCUUACACCCUGGGCUAC-ACACGUGCUACAUUGGG--CGAGACAAUGAG env.OM19 2250 AC----GCAAACCU--------------------(----GCGA-)----- env.OM19 2300 --------------AGGC-UAGCUAAUC-UAU--AAACUCGUUCUAAGUU env.OM19 2350 CGGAUUGUAGGC(--UGCAACUC)GCCUGCAUGAAGGUGGAAUCGCU--- env.OM19 2400 ---AGUAAU-CGCUGG(UC--AGC-AU)ACAGCGGUGAAUUC--GUU--- env.OM19 2450 -----------------CCCGGGCCUUGUACACACCGCCCGUCACACCAU env.OM19 2500 GGAAGCUGG-UUAUACCCGAAGUCGUU---ACUCU-AACC-(-----GUU env.OM19 2550 U------)-GG-AG-GAGG-AU-GCCU-AAGG-UAGAAUUAGUGACUAGG env.OM19 2600 GUGAAGUCGUAACAAGGUAACCGUACU(GGAA)GGUGCGGCUGGAUCACC env.OM19 2650 UCCUU..-|....................................~~~~~ env.OM19 2700 ~~~~~~~~~~~~~~~~| env.OM22 0 ...................CGAG-UU(U-GA)UCAU|GGCUCAGGAUGAA env.OM22 50 CGC-UGGCGGUAUGCCU--UACACAUGCAAGUCGUACG-AG--------- env.OM22 100 -------AGUU(UU------------------U-------)AACU----- env.OM22 150 -----|----------CA--AGU--GGCGGACGGGUGAGUAA-CACGUGA env.OM22 200 GU-AUUUAC-CUUU------------------------------------ env.OM22 250 -------------------------------------------------A env.OM22 300 GGA---------GGGGGACAACAG------------------------UU env.OM22 350 G(GAAA)CGA-CUGCUAAUACC-CCAU-AU-------------------- env.OM22 400 ------------------GCU-------(UUAG---)-------AGU--- env.OM22 450 ---GAAAU----------------------GGA-------------(--- env.OM22 500 -------UUUA------)---------|----UCCGCCUAAAGA-AAA|G env.OM22 550 -CUCGCGG|-CUGAUUA-GCUUGUUGG-UG-AG(G-UAAUGG)-CUCACC env.OM22 600 AA|GGCGACGAU-CAGUAUCUG|GUUU(GAGA)GGACGAUCAGA|CACAC env.OM22 650 UGGAA(CUGAGACACG)GUCCAG....-...(..-..)..-.--...... env.OM22 700 ..................-..........(-....).....-......|. env.OM22 750 .........................(..-......).....--....... env.OM22 800 ..|...........................(........).......... env.OM22 850 .....-.................................-.....(.... env.OM22 900 .......-.....---..-).......|..............-....... env.OM22 950 ........|..................|..........-|...-...... env.OM22 1000 ............(..................................... env.OM22 1050 ........................---------...)..........-.. env.OM22 1100 .....--.........-...-..-.-......-.........----.... env.OM22 1150 .....|...........-.......(......)..........---.... env.OM22 1200 ..............--...(....)..-.-.....-.........--... env.OM22 1250 .................................................- env.OM22 1300 ----------..........-............................. env.OM22 1350 .(...-.......).........--.......................-- env.OM22 1400 --..-..|....-..............-----------(--------... env.OM22 1450 ..---)...............................------------- env.OM22 1500 --------------------------------............-..... env.OM22 1550 (....)....-.........|.|.................(....).... env.OM22 1600 ..............................................-... env.OM22 1650 ..................(........)...................... env.OM22 1700 ....---..|...-.......------.........---(...-..)... env.OM22 1750 ..-..............-------(.....-----).--------..... env.OM22 1800 ..-------------|........|.|............|...-...... env.OM22 1850 .|..-.....|...(....).........(......)............. env.OM22 1900 .........|......-.......-.....-................... env.OM22 1950 .........----------------------------------------- env.OM22 2000 -------------------------------------------------- env.OM22 2050 -----------------------------(--.....---)......... env.OM22 2100 |GGAACUCUAGAAAGACUGCUGGU(UAUAA----)--------------- env.OM22 2150 ---------ACCGGAGGAAGGCGGGGAUGACGUC-AA--GUCAGCAUGCC env.OM22 2200 CCUUACACCCUGGGCUAC-ACACGUGCUACAUUGGG--CGAGACAAUGAG env.OM22 2250 AU----GCAACUCU--------------------(----GCGA-)----- env.OM22 2300 --------------AGAU-UAGCUAAUC-UAU--AAACUCGUUCUAAGUU env.OM22 2350 CGGAUUGCAGGC(--UGCAACUC)GCCUGCAUGAAGGUGGAAUCGCU--- env.OM22 2400 ---AGUAAU-CGCUGG(UC--AGCUAC)ACAGCGGUGAAUCC--GUU--- env.OM22 2450 -----------------CCCGGGCCUUGUACACACCGCCCGUCACACCAU env.OM22 2500 GGAAGCUGG-UUAUACCCGAAGUCGUU---ACUCU-AACC-(-----GUU env.OM22 2550 U------)-GG-AG-GAGG-AU-GCCU-AAGG-UAGAAUUAGUGACUGGG env.OM22 2600 GUGAAGUCGUAACAAGGUAACCGUACU(GGAA)GGUGUGGUUGGAUCACC env.OM22 2650 UCCUU..-|....................................~~~~~ env.OM22 2700 ~~~~~~~~~~~~~~~~| env.PAD32 0 .......................-..(....)....|............. env.PAD32 50 .................................................. env.PAD32 100 ...........(......................-----.)......... env.PAD32 150 .....|---------........--.................-....... env.PAD32 200 .................................................. env.PAD32 250 ...............................................--. env.PAD32 300 ...---------...................................... env.PAD32 350 .(....)...-...................-------------------- env.PAD32 400 -------...............------(......-).------...... env.PAD32 450 ............------------------................(... env.PAD32 500 .................).........|................-...|. env.PAD32 550 -.......|........................(.-......)....... env.PAD32 600 ..|.........-.........|....(....)...........|..... env.PAD32 650 .....(..........)..........-...(..-..)..-.--...... env.PAD32 700 ..................-..........(-....).....-......|. env.PAD32 750 .........................(..-......).....--....... env.PAD32 800 ..|...........................(........).......... env.PAD32 850 .....-.................................-.....(.... env.PAD32 900 .......-.....---..-).......|..............-....... env.PAD32 950 ........|..................|..........-|...-...... env.PAD32 1000 ............(..................................... env.PAD32 1050 ........................---------...)..........-.. env.PAD32 1100 .....--.........-...-..-.-......-.........----.... env.PAD32 1150 .....|...........-.......(......)..........---.... env.PAD32 1200 ..............--...(....)..-.-.....-.........--... env.PAD32 1250 .................................................- env.PAD32 1300 ----------..........-............................. env.PAD32 1350 .(...-.......).........--.......................-- env.PAD32 1400 --..-..|....-..............-----------(--------... env.PAD32 1450 ..---)...............................------------- env.PAD32 1500 --------------------------------............-..... env.PAD32 1550 (....)....-.........|.|.................(....).... env.PAD32 1600 ..............................................-... env.PAD32 1650 ..................(........)...................... env.PAD32 1700 ....---..|...-.......------.........---(...-..)... env.PAD32 1750 ..-..............-------(.....-----).--------..... env.PAD32 1800 ..-------------|........|.|............|...-...... env.PAD32 1850 .|..-.....|...(....).........(......)............. env.PAD32 1900 ......UCA|UUUUUA-G-UUGCC-------------------------- env.PAD32 1950 -------------------------------------------------- env.PAD32 2000 -------------------------------------------------- env.PAD32 2050 -----------------------------(--UUUAU---)--------- env.PAD32 2100 |GGAACUCUAGAAAGACUGCCGGU(UAUAA----)--------------- env.PAD32 2150 ---------ACCGGAGGAAGGCGGGGAUGACGUC-AA--GUCAGCAUGCC env.PAD32 2200 CCUUACACCCUGGGCUAC-ACACGUGCUACAAUGGG--UGAGACAAUGAG env.PAD32 2250 AU----GCAACUCU--------------------(----GCGA-)----- env.PAD32 2300 --------------AGAC-AAGCUAAUC-UAU--AAACUCACUCUAAGUU env.PAD32 2350 CGGAUUGUAGGC(--UGCAACUC)GCCUGCAUGAAGUUGGAAUCGCU--- env.PAD32 2400 ---AGUAAU-CGCUGG(UC--AGCUAU)ACAGCGGUGAAUUC--GUU--- env.PAD32 2450 -----------------CCCGGGCCUU....................... env.PAD32 2500 ...........................---...........(........ env.PAD32 2550 .....--)...-...............-....-................. env.PAD32 2600 ...........................(....)................. env.PAD32 2650 .......-|....................................~~~~~ env.PAD32 2700 ~~~~~~~~~~~~~~~~| env.PAD22 0 .......................-..(....)....|............. env.PAD22 50 .................................................. env.PAD22 100 ...........(......................-----.)......... env.PAD22 150 .....|---------........--.................-....... env.PAD22 200 .................................................. env.PAD22 250 ...............................................--. env.PAD22 300 ...---------...................................... env.PAD22 350 .(....)...-...................-------------------- env.PAD22 400 -------...............------(......-).------...... env.PAD22 450 ............------------------................(... env.PAD22 500 .................).........|................-...|. env.PAD22 550 -.......|........................(.-......)....... env.PAD22 600 ..|.........-.........|....(....)...........|..... env.PAD22 650 .....(..........)..........-...(..-..)..-.--...... env.PAD22 700 ..................-..........(-....).....-......|. env.PAD22 750 .........................(..-......).....--....... env.PAD22 800 ..|...........................(........).......... env.PAD22 850 .....-.................................-.....(.... env.PAD22 900 .......-.....---..-).......|..............-....... env.PAD22 950 ........|..................|..........-|...-...... env.PAD22 1000 ............(..................................... env.PAD22 1050 ........................---------...)..........-.. env.PAD22 1100 .....--.........-...-..-.-......-.........----.... env.PAD22 1150 .....|...........-.......(......)..........---.... env.PAD22 1200 ..............--...(....)..-.-.....-.........--... env.PAD22 1250 .................................................- env.PAD22 1300 ----------..........-............................. env.PAD22 1350 .(...-.......).........--.......................-- env.PAD22 1400 --..-..|....-..............-----------(--------... env.PAD22 1450 ..---)...............................------------- env.PAD22 1500 --------------------------------............-..... env.PAD22 1550 (....)....-.........|.|.................(....).... env.PAD22 1600 ..............................................-... env.PAD22 1650 ..................(........)...................... env.PAD22 1700 ....---..|...-.......------.........---(...-..)... env.PAD22 1750 ..-..............-------(.....-----).--------..... env.PAD22 1800 ..-------------|........|.|............|...-...... env.PAD22 1850 .|..-.....|...(....).........(......)............. env.PAD22 1900 ......UCA|UUUUUA-G-UUGCC-------------------------- env.PAD22 1950 -------------------------------------------------- env.PAD22 2000 -------------------------------------------------- env.PAD22 2050 -----------------------------(--UUAU----)--------- env.PAD22 2100 |GGAACUCUAAAAAGACUGCCGGU(UAUAA----)--------------- env.PAD22 2150 ---------ACCGGAGGAAGGCGGGGAUGACGUC-AA--GUCAGCAUGCC env.PAD22 2200 CCUUACACCCUGGGCUAC-ACACGUGCUACAAUGGG--CGAGACAAUGAG env.PAD22 2250 AU----GCAAGUCU--------------------(----GCGA-)----- env.PAD22 2300 --------------AGAU-UAGCUAAUC-UAU--AAACUCGUUCUAAGUU env.PAD22 2350 CGGAUUGUAGGC(--UGCAACUC)GCCUGCAUGAAGUUGGAAUCGCU--- env.PAD22 2400 ---AGUAAU-CGCUGG(UC--AGCUAU)ACAGCGGUGAAUUC--GUU--- env.PAD22 2450 -----------------CCCGGGCCUU....................... env.PAD22 2500 ...........................---...........(........ env.PAD22 2550 .....--)...-...............-....-................. env.PAD22 2600 ...........................(....)................. env.PAD22 2650 .......-|....................................~~~~~ env.PAD22 2700 ~~~~~~~~~~~~~~~~| env.agg462 0 .......................-..(....)....|............. env.agg462 50 .................................................. env.agg462 100 ...........(......................-----.)......... env.agg462 150 .....|---------........--.................-....... env.agg462 200 .................................................. env.agg462 250 ...............................................--. env.agg462 300 ...---------...................................... env.agg462 350 .(....)...-.......UACC-CCAU-AU-------------------- env.agg462 400 ------------------GCU-------(UUCG---)-------AGU--- env.agg462 450 ---GAAAU----------------------GGAU------------(--- env.agg462 500 -----UUAUAUUU----)---------|---AUCCGCCUAGAGA-GAA|G env.agg462 550 -CUCGCGG|-CUGAUUA-GCUUGUUGG-UA-AG(G-UAAGAG)-CUUACC env.agg462 600 AA|GGCGACGAU-CAGUAUCUG|GUUU(GAGA)GGACGAUCAGA|CACAC env.agg462 650 UGGAA(CUGAGACACG)GUCCAGA-C--UCC(UA-CG)GG-A--GGCAG- env.agg462 700 CAGUGGGG-AAUUUUCCG-CAAU-GGGC-(-GAAA)-GCCU-GACGGA|G env.agg462 750 CAAUACCGCGUGAGGGAAGACUGCC(---UAUG--)GG-UY--GUAAACC env.agg462 800 UC|CUUU-UUCAGGGAGGAA----------(--UAAAA-)---------- env.agg462 850 UGACG-UU-ACCU-GAAGAA-UAAGCAUC-GGCU-AACU-CCGUG(CCA- env.agg462 900 -GCAGCC-GCGGU---AA-)GACGGAG|GAUGCAAGUGUUAU-CCGGAAU env.agg462 950 CACUGGGC|GUAAAGCGUCUGUAGGUG|GUUUGAUAAG-|UCA-ACUGUU env.agg462 1000 AAAUCUUGAGGC(------------------------------------- env.agg462 1050 ---------------------------------UCA)ACUUCAA-AA-UC env.agg462 1100 GCAGU--CGA-AAC-U-AUU-AG-A-CUAGAG-UA-UAGUA-----GAGG env.agg462 1150 UAAAG|GGAAUUUCCAG-UGGAGCG(GUGAAA)UGCGUAGAUA---UUGG env.agg462 1200 AAAGAACACCGAU---GGC(GAAA)GC-A-CUUUA-CUG-GGCUA--U-- env.agg462 1250 -------------------------------------------------- env.agg462 1300 ----------UACUAACACU-CAG-AGACGAAAGCUAGGGUAGCAAAUGG env.agg462 1350 G(AUU-A-GAUAC)-CCCAGUAG--UC-CUA-GCCGUAAACUAUGGAU-- env.agg462 1400 --GC-UA|GAUG-UUGAACA------G-----------(--------AUC env.agg462 1450 GA---)CC------------------------------------------ env.agg462 1500 ---------------------------------CGUGCAGUAUC-AAACG env.agg462 1550 (UAAC)GCGU-UAAGUAUCC|C|GCCUGGGAAGUAUGCUC(GCAA)GAGU env.agg462 1600 GAAACUCAAAGGAAUUGACGGGGG-CC-GCACA-------AGCGGU-GGA env.agg462 1650 GCAUGUGGUUUAAUUCG-(AUGCAACG)CGAAGAACCUUACCAGGGUUUG env.agg462 1700 ACA----UG|-AU-ACG--AA------UUUCUUU-----(GAA-A-)GAA env.agg462 1750 GA-AAG---UG--CC---------(GUUU------)---------GGAA- env.agg462 1800 ---------------|CGUAUACA|C|AGGUGGUGCAUG|GCU-GUCGUC env.agg462 1850 A|-G-CUCGU|GUC(GUGA)GAUGUUGGG(UUAAGU)CCCCGAACGACGC env.agg462 1900 GAACCCUUG|UUUUUA-G-UUGCC-------------------------- env.agg462 1950 -------------------------------------------------- env.agg462 2000 -------------------------------------------------- env.agg462 2050 -----------------------------(--UUUAU---)--------- env.agg462 2100 |GGAACUCUAGAAAGACCGCCGGU(UAUAA----)--------------- env.agg462 2150 ---------ACCGGAGGAAGGCGGGGAUGACGUC-AA--GUCAGCAUGCC env.agg462 2200 CCUUACACCCUGGGCUAC-ACACGUGCUACAUUGGG--CGAGACAAUGAG env.agg462 2250 AC----GCAACUCU--------------------(----GCAA-)----- env.agg462 2300 --------------AGAU-AAGCUAAUC-UAU--AAACUCGUUCUAAGUU env.agg462 2350 CGGAUUGCAGGC(--UGCAACUC)GCCUGCAUGAAGGUGGAAUCGCU--- env.agg462 2400 ---AGUAAU-CGCUGG(UC--AGCUAU)ACAGCGGUGAAUCC--GUU--- env.agg462 2450 -----------------CCCGGGCCUUGUACACACCGCCCGUCACACCAU env.agg462 2500 GGAAGCUGG-UUAUACCCGAAGUCGUU---ACUUU-AACC-(-----AAU env.agg462 2550 U------)-GG-AG--GAG-G......-....-................. env.agg462 2600 ...........................(....)................. env.agg462 2650 .......-|....................................~~~~~ env.agg462 2700 ~~~~~~~~~~~~~~~~| env.agg56 0 .......................-..(....)....|............. env.agg56 50 .................................................. env.agg56 100 ......GAGUU(UU------------------U-------)AACUC---- env.agg56 150 -----|-------------AAGU--GGCGGACGGGUGAGUAA-CACGUGA env.agg56 200 GA-AUUUGC-CUUU------------------------------------ env.agg56 250 -------------------------------------------------A env.agg56 300 GGA---------GGGGGAUAACAG------------------------AG env.agg56 350 U(GAAA)ACG-CUGCUAAUACC-CCAU-AU-------------------- env.agg56 400 ------------------GCU-------(UUCG---)-------AGU--- env.agg56 450 ---GAAAU----------------------GGA-------------(--- env.agg56 500 -------UUUA------)---------|----UUCGCCUAAAGA-GAA|G env.agg56 550 -CUCGCGG|-CUGAUUA-GCUUGUUGG-UA-AG(G-UAAUGG)-CUUACC env.agg56 600 AA|GGCGACGAU-CAGUAUCUG|GUUU(GAGA)GGACGAUCAGA|CACAC env.agg56 650 UGGAA(CUGAGACACG)GUCCAGA-C--UCC(UA-CA)GG-A--GGCAG- env.agg56 700 CAGUGGGG-AAUUUUCCG-CAAU-GGGC-(-GAAA)-GC-U-GACGGA|G env.agg56 750 CAAUACCGCGUGAGGGAUGACUGCC(---UAUG--)GG-UU--GUAAACC env.agg56 800 UC|UUUU-CUCAGGGAGGAA----------(--AUCAA-)---------- env.agg56 850 UGACG-UU-ACCU-GAGGAA-UAAACAUC-GGCU-AACU-CCGUG(CCA- env.agg56 900 -GCAGCC-GCGGU---AA-)GACGGAG|GAUGCAAGUGUUAU-CCGGAAU env.agg56 950 CACUGGGC|GUAAAGCGUCUGUAGGUG|GUUUGAUAAG-|UCA-ACUGUU env.agg56 1000 AAAUCUUGAGGC(------------------------------------- env.agg56 1050 ---------------------------------UCA)ACUUCAA-AA-UC env.agg56 1100 GCAGU--CGA-AAC-U-AUU-AG-A-CUAGAG-UA-UAGUA-----GAGG env.agg56 1150 UAAAG|GGAAUUUCCAG-UGGAGCG(GUGAAA)UGCGUAGAUA---UUGG env.agg56 1200 AAAGAACACCGAU---GGC(GAAA)GC-A-CUUUA-CUG-GGCUA--U-- env.agg56 1250 -------------------------------------------------- env.agg56 1300 ----------UACUAACACU-CAG-AGACGAAAGCUAGGGUAGCAAAUGG env.agg56 1350 G(AUU-A-GAUAC)-CCCAGUAG--UC-CUA-GCCGUAAACUAUGGAU-- env.agg56 1400 --AC-UA|GAUG-UUGAACA------G-----------(--------AUC env.agg56 1450 GA---)CC------------------------------------------ env.agg56 1500 ---------------------------------UGUGCAGUAUC-AAACG env.agg56 1550 (UAAC)GCGU-UAAGUAUCC|C|GCCUGGGA-GUAUGCAC(GCAA)GUGU env.agg56 1600 GAAACUCAAAGGAAUUGACGGGGG-CC-GCACA-------AGCGGU-GGA env.agg56 1650 GCAUGUGGUUUAAUUCG-(AUGCAACG)CGAAGAACCUUACCAGGGUUCG env.agg56 1700 ACA----UG|-AU-ACG--AA------UUUCUUU-----(GAA-A-)GAA env.agg56 1750 GA-AAG---UG--CC---------(GUUU------)---------GGAG- env.agg56 1800 ---------------|CGUAUACA|C|AGGUGGUGCAUG|GCU-GUCGUC env.agg56 1850 A|-G-CUCGU|GUC(GUGA)GAUGUUGGG(UUAAGU)CCCGCAACGAGCG env.agg56 1900 CAACCCUUG|UUUUUA-G-UUGCC-------------------------- env.agg56 1950 --------U----------------------------------------- env.agg56 2000 -------------------------------------------------- env.agg56 2050 -----------------------------(--UUUAU---)--------- env.agg56 2100 |GGAACUCUAAAAAGACUGCUGGU(UAUAA----)--------------- env.agg56 2150 ---------ACCGGAGGAAGGUGGGGAUGACGUC-AA--GUCAGCAUGCC env.agg56 2200 CCUUACACCCUGGGCUAC-ACACGUGCUACAUUGGG--CGAGACAAUGAG env.agg56 2250 AU----GCAAAUCU--------------------(----GCAA-)----- env.agg56 2300 --------------AGAC-UAGCUAAUC-UAU--AAACUCGUUCUAAGUU env.agg56 2350 CGGAUUGUAGGC(--UGCAACUC)GCCUACAUGAAGGUGGAAUCGCU--- env.agg56 2400 ---AGUAAU-CGCUGG(UC--AGCCAU)ACAGCGGUGAAUUC--GUU--- env.agg56 2450 -----------------CCCGGGCCUUGUACACACCGCCCGUCAUACCAU env.agg56 2500 GGAAGCUGG-UUAUGCCCGAAGUCAUU---ACUCU-AGCC-(-----GUU env.agg56 2550 U------)-GG-AG--GAG-GG.....-....-................. env.agg56 2600 ...........................(....)................. env.agg56 2650 .......-|....................................~~~~~ env.agg56 2700 ~~~~~~~~~~~~~~~~| Sklt.cos_C 0 .................UUUAAA-GU(U-GA)UCCU|GGCUCAGGAUGAA Sklt.cos_C 50 CGC-UGGCGGUAUGCCU--AACACAUGCAAGUCGUACG-AG--------- Sklt.cos_C 100 -------AGUU(UU------------------U-------)AACU----- Sklt.cos_C 150 -----|----------CU--AGU--GGCGGACGGGUGAGUAA-CACGUGA Sklt.cos_C 200 GA-AUUUGC-CUUU------------------------------------ Sklt.cos_C 250 -------------------------------------------------A Sklt.cos_C 300 GGA---------GGGGGAUAACAA------------------------UU Sklt.cos_C 350 G(GAAA)CGA-AUGCUAAUACC-CCAU-AU-------------------- Sklt.cos_C 400 ------------------GCU-------(UUCG---)-------AGU--- Sklt.cos_C 450 ---GAAAU----------------------GGAU------------(--- Sklt.cos_C 500 -----UUAUAUUU----)---------|---AUCCGCCUAGAGA-GAA|G Sklt.cos_C 550 -CUCGCGG|-CUGAUUA-GCUUGUUGG-UA-AG(G-UAAGAG)-CUUACC Sklt.cos_C 600 AA|GGCGACGAU-CAGUAUCUG|GUUU(GAGA)GGACGAUCAGA|CACAC Sklt.cos_C 650 UGGAA(CUGAGACACG)GUCCAGA-C--UCC(UA-CG)GG-A--GGCAG- Sklt.cos_C 700 CAGUGGGG-AAUUUUCCG-CAAU-GGGC-(-GAAA)-GC-U-GACGGA|G Sklt.cos_C 750 CAAUACCGCGUGAGGGAGACUGCCC(---UAUG--)GG-UU--GUAAACC Sklt.cos_C 800 UC|UUUU-UUCAGGGAGGAA----------(--UCAA--)---------- Sklt.cos_C 850 UGACG-UGUACCU-GAAGAA-UAAGCAUC-GGCU-AACU-CCGUG(CCA- Sklt.cos_C 900 -GCAGCC-GCGGU---AA-)GACGGAG|GAUGCAAGUGUUAU-CCGGAAU Sklt.cos_C 950 CACUGGGC|GUAAAGCGUCUGUAGGUG|GUUUAAUAAG-|UCA-ACUGUU Sklt.cos_C 1000 AAAUCUUGAGGC(------------------------------------- Sklt.cos_C 1050 ---------------------------------UCA)ACUUCAA-AA-UC Sklt.cos_C 1100 GCAGU--CGA-AAC-U-AUU-AG-A-CUAGAG-UA-UAGUA-----GAGG Sklt.cos_C 1150 UAAAG|GGAAUUUCCAG-UGGAGCG(GUGAAA)UGCGUAGAUA---UUGG Sklt.cos_C 1200 AAAGAACACCGAU---GGC(GAAA)GC-A-CUUUA-CUG-GGCUA--U-- Sklt.cos_C 1250 -------------------------------------------------- Sklt.cos_C 1300 ----------UACUAACACU-CAG-AGACGAAAGCUAGGGUAGCAAAUGG Sklt.cos_C 1350 G(AUU-A-GAUAC)-CCCAGUAG--UC-CUA-GCCGUAAACAAUGGAU-- Sklt.cos_C 1400 --AC-UA|GAUG-UUGAACA------G-----------(--------AUC Sklt.cos_C 1450 GA---)CC------------------------------------------ Sklt.cos_C 1500 ---------------------------------UGUGCAGUAUC-AAAGC Sklt.cos_C 1550 (UAAC)GCGU-UAAGUAUCC|C|GCCUGGGAAGUAUGCUC(GCAA)GAGU Sklt.cos_C 1600 GAAACUCAAAGGAAUUGACGGGGG-CCCGCACA-------AGCGGU-GGA Sklt.cos_C 1650 GCAUGUGGUUUAAUUCG-(AUGCAACG)CGAAGAACCUUACCAGGGUUUG Sklt.cos_C 1700 ACA----UG|-AU-ACG--AA------UUUCUUU-----(GAA-A-)GAA Sklt.cos_C 1750 GA-AAG---UG--CC---------(GUUU------)---------GGAA- Sklt.cos_C 1800 ---------------|CGUAUACA|C|AGGUGGUGCAUG|GCU-GUCGUC Sklt.cos_C 1850 A|-G-CUCGU|GUC(GUGA)GAUGUUGGG(UUAAGU)CCCGCAACGAGCG Sklt.cos_C 1900 CAACCCUUG|UUUUUA-G-UUGCC-------------------------- Sklt.cos_C 1950 --------U----------------------------------------- Sklt.cos_C 2000 -------------------------------------------------- Sklt.cos_C 2050 -----------------------------(--UUUAU---)--------- Sklt.cos_C 2100 |GGAACUCUAAAAAGACUGCCGGU(UAUAA----)--------------- Sklt.cos_C 2150 ---------ACCGGAGGAAGGUGGGGAUGACGUC-AA--GUCAGCAUGCC Sklt.cos_C 2200 CCUUACACCCUGGGCUAC-ACACGUGCUACAUUGGG--CGAGACAAUGAG Sklt.cos_C 2250 AU----GCAAAUCU--------------------(----GUGA-)----- Sklt.cos_C 2300 --------------AGAC-UAGCUAAUC-UAU--AAACUCGUUCUAAGUU Sklt.cos_C 2350 CGGAUUGUAGGC(--UGCAACUC)GCCUACAUGAAGGUGGAAUCGCU--- Sklt.cos_C 2400 ---AGUAAU-CGCUGG(UC--AGCUAU)ACAGCGGUGAAUUC--GUU--- Sklt.cos_C 2450 -----------------CCCGGGCCUUGUACACACCGCCCGUCACACCAU Sklt.cos_C 2500 GGAAGCUGG--UAUACCCGAAGUCAUU---ACCUU-AACC-(------AU Sklt.cos_C 2550 U------)-GG-GGGAGGG-GG-GCCU-AAGG-UAGAAUUAGUGACUGGG Sklt.cos_C 2600 GUGAAGUCGUAACAAGGUAACCGUACU(GGAA)GGUGCGGUUGGAUCACC Sklt.cos_C 2650 UCCUUU.-|....................................~~~~~ Sklt.cos_C 2700 ~~~~~~~~~~~~~~~~| 2.11.2.1.2 0 x~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~ 2.11.2.1.2 50 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 2.11.2.1.2 100 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~ 2.11.2.1.2 150 ~~~~~~---------~~~~~~~~--~~~~~~~~~~~~~~~~~-~~~~~~~ 2.11.2.1.2 200 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 2.11.2.1.2 250 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~ 2.11.2.1.2 300 ~~~---------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 2.11.2.1.2 350 ~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~-------------------- 2.11.2.1.2 400 -------~~~~~~~~~~~~~~~------~~~~~~~-~~------~~~~~~ 2.11.2.1.2 450 ~~~~~~~~~~~~------------------~~~~~~~~~~~~~~~~~~~~ 2.11.2.1.2 500 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~ 2.11.2.1.2 550 -~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~ 2.11.2.1.2 600 ~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 2.11.2.1.2 650 ~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~-~~~~~-~--~~~~~~ 2.11.2.1.2 700 ~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~-~~~~~~~~~~-~~~~~~~~ 2.11.2.1.2 750 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~--~~~~~~~ 2.11.2.1.2 800 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 2.11.2.1.2 850 ~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~ 2.11.2.1.2 900 ~~~~~~~-~~~~~---~~-~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~ 2.11.2.1.2 950 ~~~~~~~~|~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~-~~~~~~ 2.11.2.1.2 1000 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 2.11.2.1.2 1050 ~~~~~~~~~~~~~~~~~~~~~~~~---------~~~~~~~~~~~~~~-~~ 2.11.2.1.2 1100 ~~~~~--~~~~~~~~~-~~~-~~-~-~~~~~~-~~~~~~~~~----~~~~ 2.11.2.1.2 1150 ~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~ 2.11.2.1.2 1200 ~~~~~~~~~~~~~~--~~~~~~~~~~~-~-~~~~~-~~~~~~~~~--~~~ 2.11.2.1.2 1250 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~- 2.11.2.1.2 1300 ----------~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 2.11.2.1.2 1350 ~~~~~-~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~-- 2.11.2.1.2 1400 --~~-~~~~~~~-~~~~~~~~~~~~~~-----------~--------~~~ 2.11.2.1.2 1450 ~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------------- 2.11.2.1.2 1500 --------------------------------~~~~~~~~~~~~-~~~~~ 2.11.2.1.2 1550 ~~~~~~~~~~-~~~~~~~~~~~|~~~~~~~~~~~~~~~~~~~~~~~~~~~ 2.11.2.1.2 1600 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~ 2.11.2.1.2 1650 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 2.11.2.1.2 1700 ~~~~---~~|~~~-~~~~~~~------~~~~~~~~~---~~~~-~~~~~~ 2.11.2.1.2 1750 ~~-~~~~~~~~~~~~~~-------~~~~~~-----~~--------~~~~~ 2.11.2.1.2 1800 ~~-------------~~~~~~~~~|~~~~~~~~~~~~~~~~~~-~~~~~~ 2.11.2.1.2 1850 ~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 2.11.2.1.2 1900 ~~~~~~~~~~~~~~~~-~~~~~~~-~~~~~-~~~~~~~~~~~~~~~~~~~ 2.11.2.1.2 1950 ~~~~~~~~~----------------------------------------- 2.11.2.1.2 2000 -------------------------------------------------- 2.11.2.1.2 2050 -----------------------------~--~~~~~---~~~~~~~~~~ 2.11.2.1.2 2100 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~-------~~~~~~~ 2.11.2.1.2 2150 ~~~------~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~ 2.11.2.1.2 2200 ~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~ 2.11.2.1.2 2250 ~~~---~~~~~~~~--------------------~----~~~~-~-~~~~ 2.11.2.1.2 2300 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~ 2.11.2.1.2 2350 ~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--- 2.11.2.1.2 2400 ---~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~-~~~~-- 2.11.2.1.2 2450 -----------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 2.11.2.1.2 2500 ~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~ 2.11.2.1.2 2550 ~~~~~--~~~~-~~~~~~~~~~~~~~~-~~~~-~~~~~~~~~~~~~~~~~ 2.11.2.1.2 2600 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 2.11.2.1.2 2650 ~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 2.11.2.1.2 2700 ~~~~~~~~~~~~~~~~| Eugl.gr4_C 0 ~~~~~~~~~~UGGAAAUGACGAG-UU(U-GA)UCCU|UGCUCAGGGUGAA Eugl.gr4_C 50 CGC-UGGCGGUAUGCUU--AACACAUGCAAGUUGAACG-AA--------- Eugl.gr4_C 100 ----AUUACUA(GC------------------AA------)UAGUAAU-- Eugl.gr4_C 150 -----|----------UU--AGU--GGCGGACGGGUGAGUAA-UAUGUAA Eugl.gr4_C 200 GA-AUCUGC-GCUU------------------------------------ Eugl.gr4_C 250 -------------------------------------------------G Eugl.gr4_C 300 GGU---------GAGGAAUAACAG------------------------AU Eugl.gr4_C 350 G(GAAA)CGU-UUGCUAAUGCC-UCAUAAU-------------------- Eugl.gr4_C 400 -------UUACUAGAUC-UAU-------(GUGA---)-------GUAGCU Eugl.gr4_C 450 AGUUAAA-----------------------GA--------------(--- Eugl.gr4_C 500 -------GAAUU-----)---------|-----UCGCCUAGGCA-UGA|G Eugl.gr4_C 550 -CUUGCAU|-CUGAUUA-GCUUGUUGG-UG-AG(G-UAAAGG)-CUUACC Eugl.gr4_C 600 AA|GGCGACGAU-CAGUAGCUG|AUUU(GAGA)GGAUGAUCAGC|CACAC Eugl.gr4_C 650 UGGGA(UUGAGA-ACG)GAACAGA-C--UUU(UA-CG)GA-A--GGCAG- Eugl.gr4_C 700 CAGUGAGG-AAUUUUCCG-CAAU-GGGC-(-GCAA)-GCCU-GACGGA|G Eugl.gr4_C 750 CAAUACCGCGUGAAGGAAGAAGGCC(---UUUG--)GG-UU--GUAAACU Eugl.gr4_C 800 UC|UUUU-CUCAAAGAAGAA----------(--GAAA--)---------- Eugl.gr4_C 850 UGACG-GU-AUUU-GAGGAA-UAAGCAUC-GGCU-AAUU-CCGUG(CCA- Eugl.gr4_C 900 -GCAGCC-GCGGU---AA-)UACGGGA|GAUGCGAGCGUUAU-CCGGAAU Eugl.gr4_C 950 UAUUGGGC|GUAAAGAGUUUGUAGGCG|GUCAAGUGUG-|UUU-AAUGUU Eugl.gr4_C 1000 AAAAGUCAAAGC(------------------------------------- Eugl.gr4_C 1050 ---------------------------------UUA)ACUUUGG-AA-GG Eugl.gr4_C 1100 GCAUU--AAA-AAC-U-GCU-AG-A-CUUGAG-UA-UGGUA-----GGGG Eugl.gr4_C 1150 UGAAG|GGAAUUUCCAG-UGUAGCG(GUGAAA)UGCGUAGAGA---UUGG Eugl.gr4_C 1200 AAAGAACACCAAU---GGC(GAAG)GC-A-CUUUU-CUA-GGCCA--A-- Eugl.gr4_C 1250 -------------------------------------------------- Eugl.gr4_C 1300 ----------UACUGACGCU-GAG-AAACGAAAGCUGAGGGAGCAAACAG Eugl.gr4_C 1350 G(AUU-A-GAUAC)-CCUGGUAG--UC-UUG-GCCGUAAACUAUGGAU-- Eugl.gr4_C 1400 --AC-UA|AGUG-GUGC---------U-----------(--------GAA Eugl.gr4_C 1450 AG---)U------------------------------------------- Eugl.gr4_C 1500 ------------------------------------GCACUGCU-GUAGU Eugl.gr4_C 1550 (UAAC)ACGU-UAAGUAUCC|C|GCCUGGGGAGUACGCUU(GCAC)AAGU Eugl.gr4_C 1600 GAAACUCAAAGGAAUUGACGGGGGCCC-GCACA-------AGCGGU-GGA Eugl.gr4_C 1650 GCAUGUGGUUUAAUUCG-(AUGCAACA)CGAAGAACCUUACCAGGAUUUG Eugl.gr4_C 1700 ACA----GG|-AU-CUAGGAG------GAAGUUU-----(GAA-A-)GAA Eugl.gr4_C 1750 CG-CAG---UA--CC---------(UUCG------)---------GGUA- Eugl.gr4_C 1800 ---------------|UCUAGACA|C|AGGUGGUGCAUG|GCU-GUCGUC Eugl.gr4_C 1850 A|-G-CUCGU|GUC(GUGA)GAUGUUGGG(UUAAGU)CCCGCAAC----- Eugl.gr4_C 1900 ----CCUUU|UUUUUA-A-UUAAC-GC----------------------- Eugl.gr4_C 1950 -------------------------------------------------- Eugl.gr4_C 2000 -------------------------------------------------- Eugl.gr4_C 2050 -----------------------------(----------)--------U Eugl.gr4_C 2100 |UGUCAUUUAGAAAUACUGCUGGU(UA-UU----)--------------- Eugl.gr4_C 2150 ---------ACCAGAGGAAGGUGAGGACGACGUC-AA--GUCAUCAUGCC Eugl.gr4_C 2200 CCUUAUAUCCUGGGCUAC-ACACGUGCUACAAUGGU--UAAGACAAUAAG Eugl.gr4_C 2250 UU----GCAAUUUU--------------------(----GUGA-)----- Eugl.gr4_C 2300 --------------AAAU-GAGCUAAUC-UUA--AAACUUAGCCUAAGUU Eugl.gr4_C 2350 CGGAUUGUAGGC(--UGAAACUC)GCCUACAUGAAGCCGGAAUCGCU--- Eugl.gr4_C 2400 ---AGUAAU-CGCCGG(UC--AGCUAU)ACGGCGGUGAAUAC--GUU--- Eugl.gr4_C 2450 -----------------CUCGGGCCUUGUACACACCGCCCGUCACACCAU Eugl.gr4_C 2500 GGAAGUUGG-CUGUGCCCGAAGUUAUU---AUCUU-GCCU-(-----GAA Eugl.gr4_C 2550 A------)-AG-AGG-GAA-AU-ACCU-AAGG-CCUGGCUGGUGACUGGG Eugl.gr4_C 2600 GUGAAGUCGUAACAAGGUAGCCGUACU(GGAA)GGUGUGGCUGGAACAAU Eugl.gr4_C 2650 UCCC~~~-|~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ Eugl.gr4_C 2700 ~~~~~~~~~~~~~~~~| Eugl.gr1_C 0 ~~~~~~~~~~UGGAAAUGACGAG-UU(U-GA)UCCU|UGCUCAGGGUGAA Eugl.gr1_C 50 CGC-UGGCGGUAUGCUU--AACACAUGCAAGUUGAACG-AA--------- Eugl.gr1_C 100 ----AUUACUA(GC------------------AA------)UAGUAAU-- Eugl.gr1_C 150 -----|----------UU--AGU--GGCGGACGGGUGAGUAA-UAUGUAA Eugl.gr1_C 200 GA-AUCUGC-GCUU------------------------------------ Eugl.gr1_C 250 -------------------------------------------------G Eugl.gr1_C 300 GGC---------GAGGAAUAACAG------------------------AU Eugl.gr1_C 350 G(GAAA)CGU-UUGCUAAUGCC-UCAUAAU-------------------- Eugl.gr1_C 400 -------UUACUAGAUC-UAU-------(GUGA---)-------GUAGCU Eugl.gr1_C 450 AGUUAAA-----------------------GA--------------(--- Eugl.gr1_C 500 -------GAAUU-----)---------|-----UCGCCUAGGCA-UGA|G Eugl.gr1_C 550 -CUUGCAU|-CUGAUUA-GCUUGUUGG-UG-AG(G-UAAAGG)-CUUACC Eugl.gr1_C 600 AA|GGCGACGAU-CAGUAGCUG|AUUU(GAGA)GGAUGAUCAGC|CACAC Eugl.gr1_C 650 UGGGA(UUGAGA-ACG)GAACAGA-C--UUC(UA-CG)GA-A--GGCAG- Eugl.gr1_C 700 CAGUGAGG-AAUUUUCCG-CAAU-GGGC-(-GCAA)-GCCU-GACGGA|G Eugl.gr1_C 750 CAAUACCGCGUGAAGGAAGACGGCC(---UUUG--)GG-UU--GAAAACC Eugl.gr1_C 800 UC|UUUU-CUCAAAGAAGAA----------(--GAAA--)---------- Eugl.gr1_C 850 UGACG-GU-AUUU-GAGGAA-UAAGCAUC-GGCU-AAUU-CCGUG(CCA- Eugl.gr1_C 900 -GCAGCC-GCGGU---AA-)UACGGGA|GAUGCGAGCGUUAU-CCGGAAU Eugl.gr1_C 950 UAUUGGGC|GUAAAGAGUUUGUAGGCG|GUCAAGUGUG-|UUU-AAUGUU Eugl.gr1_C 1000 AAAAGUCAAAGC(------------------------------------- Eugl.gr1_C 1050 ---------------------------------UUA)ACUUUGG-AA-GG Eugl.gr1_C 1100 GCAUU--AAA-AAC-U-GCU-AG-A-CUUGAG-UA-UGGUA-----GGGG Eugl.gr1_C 1150 UGAAG|GGAAUUUCCAG-UGUAGCG(GUGAAA)UGCGUAGAGA---UUGG Eugl.gr1_C 1200 AAAGAACACCAAU---GGC(GAAG)GC-A-CUUUU-CUA-GGCCA--A-- Eugl.gr1_C 1250 -------------------------------------------------- Eugl.gr1_C 1300 ----------UACUGACGCU-GAG-AAACGAAAGCUGAGGGAGCAAACAG Eugl.gr1_C 1350 G(AUU-A-GAUAC)-CCU-GUAG--UC-UUG-GCCGUAAACUAUGGAU-- Eugl.gr1_C 1400 --AC-UA|AGUG-GUGC---------U-----------(--------GAA Eugl.gr1_C 1450 AG---)U------------------------------------------- Eugl.gr1_C 1500 ------------------------------------GCACUGCU-GUAGU Eugl.gr1_C 1550 (UAAC)ACGU-UAAGUAUCC|C|GCCUGGGGAGUACGCUU(GCAC)AAGU Eugl.gr1_C 1600 GAAACUCAAAGGAAUUGACGGGGGCCC-GCACA-------AGCGGU-GGA Eugl.gr1_C 1650 GCAUGUGGUUUAAUUCG-(AUGCAACA)CGAAGAACCUUACCAGGAUUUG Eugl.gr1_C 1700 ACA----GG|-AU-CUA---G------GAAGUUU-----(GAA-A-)GAA Eugl.gr1_C 1750 CG-CAG---UA--CC---------(UUCG------)---------GGUA- Eugl.gr1_C 1800 ---------------|UCUAGACA|C|AGGUGGUGCAUG|GCU-GUCGUC Eugl.gr1_C 1850 A|-G-CUCGU|GUC(GUGA)GAUGUUGGG(UUAAGU)CCCGCAACGAGCG Eugl.gr1_C 1900 CAACCCUUU|UUUUUA-A-UUAAC-GC----------------------- Eugl.gr1_C 1950 -------------------------------------------------- Eugl.gr1_C 2000 -------------------------------------------------- Eugl.gr1_C 2050 -----------------------------(----------)--------U Eugl.gr1_C 2100 |UGUCAUUUAGAAAUACUGCUGGU(UA-UU----)--------------- Eugl.gr1_C 2150 ---------ACCGGAGGAAGGUGAGGACGACGUC-AA--GUCAUCAUGCC Eugl.gr1_C 2200 CCUUAUAUCCUGGGCUAC-ACACGUGCUACAAUGGU--UAAGACAAUAAG Eugl.gr1_C 2250 UU----GCAAUUUU--------------------(----GUGA-)----- Eugl.gr1_C 2300 --------------AAAU-GAGCUAAUC-UUA--AAACUUAGCCUAAGUU Eugl.gr1_C 2350 CGGAUUGUAGGC(--UGAAACUC)GCCUACAUGAAGCCGGAAUCGCU--- Eugl.gr1_C 2400 ---AGUAAU-CGCCGG(UC--AGCUAU)ACGGCGGUGAAUAC--GUU--- Eugl.gr1_C 2450 -----------------CUCGGGCCUUGUACACACCGCCCGUCACACCAU Eugl.gr1_C 2500 GGAAGUCGG-CUGUGCCCGAAGUUAUU---AUCUU-GCCU-(-----GAA Eugl.gr1_C 2550 A------)-AG-AGG-GAA-AU-ACCU-AAGG-CCUGGCUGGUGACUGGG Eugl.gr1_C 2600 GUGAAGUCGUAACAAGGUAGCCGUACU(GGAA)GGUGUGGCUGGAACAAC Eugl.gr1_C 2650 UCCC~~~-|~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ Eugl.gr1_C 2700 ~~~~~~~~~~~~~~~~| Eugl.gr2_C 0 ~~~~~~~~~~UGGAAAUGACGAG-UU(U-GA)UCCU|UGCUCAGGGUGAA Eugl.gr2_C 50 CGC-UGGCGGUAUGCUU--AACACAUGCAAGUUGAACG-AA--------- Eugl.gr2_C 100 ----AUUACUA(GC------------------AA------)UAGUAAU-- Eugl.gr2_C 150 -----|----------UU--AGU--GGCGGACGGGUGAGUAA-UAUGUAA Eugl.gr2_C 200 GA-AUCUGC-GCUU------------------------------------ Eugl.gr2_C 250 -------------------------------------------------G Eugl.gr2_C 300 GGC---------GAGGAAUAACAG------------------------AU Eugl.gr2_C 350 G(GAAA)CGU-UUGCUAAUGCC-UCAUAAU-------------------- Eugl.gr2_C 400 -------UUACUAGAUC-UAU-------(GUGA---)-------GUAGCU Eugl.gr2_C 450 AGUUAAA-----------------------GA--------------(--- Eugl.gr2_C 500 -------GAAUU-----)---------|-----UCGCCUAGGCA-UGA|G Eugl.gr2_C 550 -CUUGCAU|-CUGAUUA-GCUUGUUGG-UG-AG(G-UAAAGG)-CUUACC Eugl.gr2_C 600 AA|GGCGACGAU-CAGUAGCUG|AUUU(GAGA)GGAUGAUCAGC|CACAC Eugl.gr2_C 650 UGGGA(UUGAGA-ACG)GAACAGA-C--UUC(UA-CG)GA-A--GGCAG- Eugl.gr2_C 700 CAGUGAGG-AAUUUUCCG-CAAU-GGGC-(-GCAA)-GCCU-GACGGA|G Eugl.gr2_C 750 CAAUACCGCGUGAAGGAAGACGGCC(---UUUG--)GG-UU--GAAAACC Eugl.gr2_C 800 UC|UUUU-CUCAAAGAAGAA----------(--GAAA--)---------- Eugl.gr2_C 850 UGACG-GU-AUUU-GAGGAA-UAAGCAUC-GGCU-AAUU-CCGUG(CCA- Eugl.gr2_C 900 -GCAGCC-GCGGU---AA-)UACGGGA|GAUGCGAGCGUUAU-CCGGAAU Eugl.gr2_C 950 UAUUGGGC|GUAAAGAGUUUGUAGGCG|GUCAAGUGUG-|UUU-AAUGUU Eugl.gr2_C 1000 AAAAGUCAAAGC(------------------------------------- Eugl.gr2_C 1050 ---------------------------------UUA)ACUUUGG-AA-GG Eugl.gr2_C 1100 GCAUU--AAA-AAC-U-GCU-AG-A-CUUGAG-UA-UGGUA-----GGGG Eugl.gr2_C 1150 UGAAG|GGAAUUUCCAG-UGUAGCG(GUGAAA)UGCGUAGAGA---UUGG Eugl.gr2_C 1200 AAAGAACACCAAU---GGC(GAAG)GC-A-CUUUU-CUA-GGCCA--A-- Eugl.gr2_C 1250 -------------------------------------------------- Eugl.gr2_C 1300 ----------UACUGACGCU-GAG-AAACGAAAGCUGAGGGAGCAAACAG Eugl.gr2_C 1350 G(AUU-A-GAUAC)-CCU-GUAG--UC-UUG-GCCGUAAACUAUGGAU-- Eugl.gr2_C 1400 --AC-UA|AGUG-GUGC---------U-----------(--------GAA Eugl.gr2_C 1450 AG---)U------------------------------------------- Eugl.gr2_C 1500 ------------------------------------GCACUGCU-GUAGU Eugl.gr2_C 1550 (UAAC)ACGU-UAAGUAUCC|C|GCCUGGGGAGUACGCUU(GCAC)AAGU Eugl.gr2_C 1600 GAAACUCAAAGGAAUUGACGGGGGCCC-GCACA-------AGCGGU-GGA Eugl.gr2_C 1650 GCAUGUGGUUUAAUUCG-(AUGCAACA)CGAAGAACCUUACCAGGAUUUG Eugl.gr2_C 1700 ACA----GG|-AU-CUA---G------GAAGUUU-----(GAA-A-)GAA Eugl.gr2_C 1750 CG-CAG---UA--CC---------(UUCG------)---------GGUA- Eugl.gr2_C 1800 ---------------|UCUAGACA|C|AGGUGGUGCAUG|GCU-GUCGUC Eugl.gr2_C 1850 A|-G-CUCGU|GUC(GUGA)GAUGUUGGG(UUAAGU)CCCGCAACGAGCG Eugl.gr2_C 1900 CAACCCUUU|UUUUUA-A-UUAAC-GC----------------------- Eugl.gr2_C 1950 -------------------------------------------------- Eugl.gr2_C 2000 -------------------------------------------------- Eugl.gr2_C 2050 -----------------------------(----------)--------U Eugl.gr2_C 2100 |UGUCAUUUAGAAAUACUGCUGGU(UA-UU----)--------------- Eugl.gr2_C 2150 ---------ACCGGAGGAAGGUGAGGACGACGUC-AA--GUCAUCAUGCC Eugl.gr2_C 2200 CCUUAUAUCCUGGGCUAC-ACACGUGCUACAAUGGU--UAAGACAAUAAG Eugl.gr2_C 2250 UU----GCAAUUUU--------------------(----GUGA-)----- Eugl.gr2_C 2300 --------------AAAU-GAGCUAAUC-UUA--AAACUUAGCCUAAGUU Eugl.gr2_C 2350 CGGAUUGUAGGC(--UGAAACUC)GCCUACAUGAAGCCGGAAUCGCU--- Eugl.gr2_C 2400 ---AGUAAU-CGCCGG(UC--AGCUAU)ACGGCGGUGAAUAC--GUU--- Eugl.gr2_C 2450 -----------------CUCGGGCCUUGUACACACCGCCCGUCACACCAU Eugl.gr2_C 2500 GGAAGUCGG-CUGUGCCCGAAGUUAUU---AUCUU-GCCU-(-----GAA Eugl.gr2_C 2550 A------)-AG-AGG-GAA-AU-ACCU-AAGG-CCUGGCUGGUGACUGGG Eugl.gr2_C 2600 GUGAAGUCGUAACAAGGUAGCCGUACU(GGAA)GGUGUGGCUGGAACAAC Eugl.gr2_C 2650 UCCC~~~-|~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ Eugl.gr2_C 2700 ~~~~~~~~~~~~~~~~| Eugl.gr3_C 0 ~~~~~~~~~~UGGAAAUGACGAG-UU(U-GA)UCCU|UGCUCAGGGUGAA Eugl.gr3_C 50 CGC-UGGCGGUAUGCUU--AACACAUGCAAGUUGAACG-AA--------- Eugl.gr3_C 100 ----AUUACUA(GC------------------AA------)UAGUAAU-- Eugl.gr3_C 150 -----|----------UU--AGU--GGCGGACGGGUGAGUAA-UAUGUAA Eugl.gr3_C 200 GA-AUCUGC-GCUU------------------------------------ Eugl.gr3_C 250 -------------------------------------------------G Eugl.gr3_C 300 GGC---------GAGGAAUAACAG------------------------AU Eugl.gr3_C 350 G(GAAA)CGU-UUGCUAAUGCC-UCAUAAU-------------------- Eugl.gr3_C 400 -------UUACUAGAUC-UAU-------(GUGA---)-------GUAGCU Eugl.gr3_C 450 AGUUAAA-----------------------GA--------------(--- Eugl.gr3_C 500 -------GAAUU-----)---------|-----UCGCCUAGGCA-UGA|G Eugl.gr3_C 550 -CUUGCAU|-CUGAUUA-GCUUGUUGG-UG-AG(G-UAAAGG)-CUUACC Eugl.gr3_C 600 AA|GGCGACGAU-CAGUAGCUG|AUUU(GAGA)GGAUGAUCAGC|CACAC Eugl.gr3_C 650 UGGGA(UUGAGA-ACG)GAACAGA-C--UUC(UA-CG)GA-A--GGCAG- Eugl.gr3_C 700 CAGUGAGG-AAUUUUCCG-CAAU-GGGC-(-GCAA)-GCCU-GACGGA|G Eugl.gr3_C 750 CAAUACCGCGUGAAGGAAGACGGCC(---UUUG--)GG-UU--GAAAACC Eugl.gr3_C 800 UC|UUUU-CUCAAAGAAGAA----------(--GAAA--)---------- Eugl.gr3_C 850 UGACG-GU-AUUU-GAGGAA-UAAGCAUC-GGCU-AAUU-CCGUG(CCA- Eugl.gr3_C 900 -GCAGCC-GCGGU---AA-)UACGGGA|GAUGCGAGCGUUAU-CCGGAAU Eugl.gr3_C 950 UAUUGGGC|GUAAAGAGUUUGUAGGCG|GUCAAGUGUG-|UUU-AAUGUU Eugl.gr3_C 1000 AAAAGUCAAAGC(------------------------------------- Eugl.gr3_C 1050 ---------------------------------UUA)ACUUUGG-AA-GG Eugl.gr3_C 1100 GCAUU--AAA-AAC-U-GCU-AG-A-CUUGAG-UA-UGGUA-----GGGG Eugl.gr3_C 1150 UGAAG|GGAAUUUCCAG-UGUAGCG(GUGAAA)UGCGUAGAGA---UUGG Eugl.gr3_C 1200 AAAGAACACCAAU---GGC(GAAG)GC-A-CUUUU-CUA-GGCCA--A-- Eugl.gr3_C 1250 -------------------------------------------------- Eugl.gr3_C 1300 ----------UACUGACGCU-GAG-AAACGAAAGCUGAGGGAGCAAACAG Eugl.gr3_C 1350 G(AUU-A-GAUAC)-CCU-GUAG--UC-UUG-GCCGUAAACUAUGGAU-- Eugl.gr3_C 1400 --AC-UA|AGUG-GUGC---------U-----------(--------GAA Eugl.gr3_C 1450 AG---)U------------------------------------------- Eugl.gr3_C 1500 ------------------------------------GCACUGCU-GUAGU Eugl.gr3_C 1550 (UAAC)ACGU-UAAGUAUCC|C|GCCUGGGGAGUACGCUU(GCAC)AAGU Eugl.gr3_C 1600 GAAACUCAAAGGAAUUGACGGGGGCCC-GCACA-------AGCGGU-GGA Eugl.gr3_C 1650 GCAUGUGGUUUAAUUCG-(AUGCAACA)CGAAGAACCUUACCAGGAUUUG Eugl.gr3_C 1700 ACA----GG|-AU-CUA---G------GAAGUUU-----(GAA-A-)GAA Eugl.gr3_C 1750 CG-CAG---UA--CC---------(UUCG------)---------GGUA- Eugl.gr3_C 1800 ---------------|UCUAGACA|C|AGGUGGUGCAUG|GCU-GUCGUC Eugl.gr3_C 1850 A|-G-CUCGU|GUC(GUGA)GAUGUUGGG(UUAAGU)CCCGCAACGAGCG Eugl.gr3_C 1900 CAACCCUUU|UUUUUA-A-UUAAC-GC----------------------- Eugl.gr3_C 1950 -------------------------------------------------- Eugl.gr3_C 2000 -------------------------------------------------- Eugl.gr3_C 2050 -----------------------------(----------)--------U Eugl.gr3_C 2100 |UGUCAUUUAGAAAUACUGCUGGU(UA-UU----)--------------- Eugl.gr3_C 2150 ---------ACCGGAGGAAGGUGAGGACGACGUC-AA--GUCAUCAUGCC Eugl.gr3_C 2200 CCUUAUAUCCUGGGCUAC-ACACGUGCUACAAUGGU--UAAGACAAUAAG Eugl.gr3_C 2250 UU----GCAAUUUU--------------------(----GUGA-)----- Eugl.gr3_C 2300 --------------AAAU-GAGCUAAUC-UUA--AAACUUAGCCUAAGUU Eugl.gr3_C 2350 CGGAUUGUAGGC(--UGAAACUC)GCCUACAUGAAGCCGGAAUCGCU--- Eugl.gr3_C 2400 ---AGUAAU-CGCCGG(UC--AGCUAU)ACGGCGGUGAAUAC--GUU--- Eugl.gr3_C 2450 -----------------CUCGGGCCUUGUACACACCGCCCGUCACACCAU Eugl.gr3_C 2500 GGAAGUCGG-CUGUGCCCGAAGUUAUU---AUCUU-GCCU-(-----GAA Eugl.gr3_C 2550 A------)-AG-AGG-GAA-AU-ACCU-AAGG-CCUGGCUGGUGACUGGG Eugl.gr3_C 2600 GUGAAGUCGUAACAAGGUAGCCGUACU(GGAA)GGUGUGGCUGGAACAAC Eugl.gr3_C 2650 UCCC~~~-|~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ Eugl.gr3_C 2700 ~~~~~~~~~~~~~~~~| 2.11.2.1.3 0 x~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~ 2.11.2.1.3 50 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 2.11.2.1.3 100 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~ 2.11.2.1.3 150 ~~~~~~---------~~~~~~~~--~~~~~~~~~~~~~~~~~-~~~~~~~ 2.11.2.1.3 200 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 2.11.2.1.3 250 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~ 2.11.2.1.3 300 ~~~---------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 2.11.2.1.3 350 ~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~-------------------- 2.11.2.1.3 400 -------~~~~~~~~~~~~~~~------~~~~~~~-~~------~~~~~~ 2.11.2.1.3 450 ~~~~~~~~~~~~------------------~~~~~~~~~~~~~~~~~~~~ 2.11.2.1.3 500 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~ 2.11.2.1.3 550 -~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~ 2.11.2.1.3 600 ~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 2.11.2.1.3 650 ~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~-~~~~~-~--~~~~~~ 2.11.2.1.3 700 ~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~-~~~~~~~~~~-~~~~~~~~ 2.11.2.1.3 750 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~--~~~~~~~ 2.11.2.1.3 800 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 2.11.2.1.3 850 ~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~ 2.11.2.1.3 900 ~~~~~~~-~~~~~---~~-~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~ 2.11.2.1.3 950 ~~~~~~~~|~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~-~~~~~~ 2.11.2.1.3 1000 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 2.11.2.1.3 1050 ~~~~~~~~~~~~~~~~~~~~~~~~---------~~~~~~~~~~~~~~-~~ 2.11.2.1.3 1100 ~~~~~--~~~~~~~~~-~~~-~~-~-~~~~~~-~~~~~~~~~----~~~~ 2.11.2.1.3 1150 ~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~ 2.11.2.1.3 1200 ~~~~~~~~~~~~~~--~~~~~~~~~~~-~-~~~~~-~~~~~~~~~--~~~ 2.11.2.1.3 1250 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~- 2.11.2.1.3 1300 ----------~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 2.11.2.1.3 1350 ~~~~~-~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~-- 2.11.2.1.3 1400 --~~-~~~~~~~-~~~~~~~~~~~~~~-----------~--------~~~ 2.11.2.1.3 1450 ~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------------- 2.11.2.1.3 1500 --------------------------------~~~~~~~~~~~~-~~~~~ 2.11.2.1.3 1550 ~~~~~~~~~~-~~~~~~~~~~~|~~~~~~~~~~~~~~~~~~~~~~~~~~~ 2.11.2.1.3 1600 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~ 2.11.2.1.3 1650 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 2.11.2.1.3 1700 ~~~~---~~|~~~-~~~~~~~------~~~~~~~~~---~~~~-~~~~~~ 2.11.2.1.3 1750 ~~-~~~~~~~~~~~~~~-------~~~~~~-----~~--------~~~~~ 2.11.2.1.3 1800 ~~-------------~~~~~~~~~|~~~~~~~~~~~~~~~~~~-~~~~~~ 2.11.2.1.3 1850 ~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 2.11.2.1.3 1900 ~~~~~~~~~~~~~~~~-~~~~~~~-~~~~~-~~~~~~~~~~~~~~~~~~~ 2.11.2.1.3 1950 ~~~~~~~~~----------------------------------------- 2.11.2.1.3 2000 -------------------------------------------------- 2.11.2.1.3 2050 -----------------------------~--~~~~~---~~~~~~~~~~ 2.11.2.1.3 2100 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~-------~~~~~~~ 2.11.2.1.3 2150 ~~~------~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~ 2.11.2.1.3 2200 ~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~ 2.11.2.1.3 2250 ~~~---~~~~~~~~--------------------~----~~~~-~-~~~~ 2.11.2.1.3 2300 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~ 2.11.2.1.3 2350 ~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--- 2.11.2.1.3 2400 ---~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~-~~~~-- 2.11.2.1.3 2450 -----------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 2.11.2.1.3 2500 ~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~ 2.11.2.1.3 2550 ~~~~~--~~~~-~~~~~~~~~~~~~~~-~~~~-~~~~~~~~~~~~~~~~~ 2.11.2.1.3 2600 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 2.11.2.1.3 2650 ~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 2.11.2.1.3 2700 ~~~~~~~~~~~~~~~~| Ochs.nea_C 0 ~~~~~~~~~~UGCCUGCAGAGAG-UU(Y-GA)UCCU|GGCUCAGGAUGAA Ochs.nea_C 50 CGC-UGGCGGUAUGCUU--AACACAUGCAAGUCGGACG-AG--------- Ochs.nea_C 100 --------AGU(UU-----------------UUA------)ACU------ Ochs.nea_C 150 -----|----------CU--AGU--GGCGAACGGGUGCGUAA-UACGUGA Ochs.nea_C 200 GA-AUCUGC-CCUU------------------------------------ Ochs.nea_C 250 -------------------------------------------------A Ochs.nea_C 300 GGA---------GGGGAAUAACUG------------------------UU Ochs.nea_C 350 G(GAAA)CGA-YAGCUAAAUCC-CCAU-AU-------------------- Ochs.nea_C 400 ------------------GCC-------(GAGA---)-------GGU--- Ochs.nea_C 450 ---GAAAU----------------------AGU-------------(--- Ochs.nea_C 500 -------UUAC------)---------|----ACUGCCUAAGGA-UGA|G Ochs.nea_C 550 -CUCGCGC|-CUGAUUA-GCUUGUUGG-UA-AG(G-UAACGG)-CUUACC Ochs.nea_C 600 AA|GGCCACGAU-CAGUAGCUG|GUUU(GAGA)GAAUGAUCAGC|CACAC Ochs.nea_C 650 UGGGA(CUGAGACACG)GCCCAGA-C--UCC(UC-CG)GG-A--GGCAG- Ochs.nea_C 700 CAGUGAGG-AAUUUUCCG-CAAU-GGGC-(-GAAA)-GCCU-GACGGA|G Ochs.nea_C 750 CAAUACCGCGUGAGGGAUGAAGGAU(---UUUG--)GU-CU--GUAAACC Ochs.nea_C 800 UC|UUUU-CUCAAGAAAGAA----------(--GUUC--)---------- Ochs.nea_C 850 UGACG-GU-ACUU-GAGGAA-UAAGCAUC-GGCU-AACU-CCGUG(CCA- Ochs.nea_C 900 -GCAGCC-GCGGU---AA-)UACGGGG|GAUGCAAGCGUUAU-CCGGAAU Ochs.nea_C 950 CAUUGGGC|GUAAAGCGCCUGUAGGUU|GUCUAAUAAG-|UCU-GUUGUU Ochs.nea_C 1000 AAAGACUAGGGC(------------------------------------- Ochs.nea_C 1050 ---------------------------------UUA)ACCCUGG-GA-AA Ochs.nea_C 1100 GCGAU--GGA-AAC-U-AAU-AG-G-CUUGAG-UA-UGGUA-----GGGG Ochs.nea_C 1150 UAGAG|GGAAUUUCUAG-UGUAGCG(GUGAAA)UGCGUAGAUA---UUAG Ochs.nea_C 1200 AAAGAACACCGGU---GGC(GAAA)GC-G-CUCUA-CUG-GGCCA--U-- Ochs.nea_C 1250 -------------------------------------------------- Ochs.nea_C 1300 ----------UACUGACACU-GAG-AGGCGAAAGCUAGGGGAGCAAAAGG Ochs.nea_C 1350 G(AUU-A-GAUAC)-CCCUGUAG--UC-CUA-GCCGUAAACGAUGGAU-- Ochs.nea_C 1400 --AC-UA|GGUG-UUGUAU-------------------(---------UA Ochs.nea_C 1450 UU---)-------------------------------------------- Ochs.nea_C 1500 ----------------------------------GUACAGUAUC-GUAGC Ochs.nea_C 1550 (UAAC)GCGU-UAAGUAUCC|C|GCCUGGGGAGUACGCUC(GCAA)GGGU Ochs.nea_C 1600 GAAACUCAAAGGAAUUGACGGGGGCCC-GCACA-------AGCGGU-GGA Ochs.nea_C 1650 GCAUGUGGUUUAAUUCG-(AUGCAACG)CGAAGAACCUUACCAGGGCUUG Ochs.nea_C 1700 ACA----UA|-CU-ACA--GA------UCUUUUU-----(GAG-A-)CGA Ochs.nea_C 1750 AA-GAG---UG--CC---------(UUYG------)---------GGAA- Ochs.nea_C 1800 ---------------|UGUAGAUA|C|AGGUGGUGCAUG|GCU-GUCGUC Ochs.nea_C 1850 A|-G-CUCGU|GUC(GUGA)GAUGUUGGG(UUAAGU)CCCGCAACGAGCG Ochs.nea_C 1900 CAACCCUCG|UUUUUA-G-UUGCC-A--A--------------------- Ochs.nea_C 1950 -------------------------------------------------- Ochs.nea_C 2000 -------------------------------------------------- Ochs.nea_C 2050 -----------------------------(--UUUAU---)-------UG Ochs.nea_C 2100 |GGAUCUCUAGAGAGACUGCCGGU(GAUAA----)--------------- Ochs.nea_C 2150 ---------ACCGGAGGAAGGUGAGGAUGACGUC-AA--GUCAGCAUGCC Ochs.nea_C 2200 CCUUAUGUCCUGGGCCAC-ACACGUGCUACAAUGAC--AAAGACAAAGAG Ochs.nea_C 2250 UC----GCAAAUUC--------------------(----GCGA-)----- Ochs.nea_C 2300 --------------GAAC-UAGCUAAUC-UCAU-AAACUUUGUCCAAGUU Ochs.nea_C 2350 CGGAUUGUAGGC(--UGCAACUC)GCCUACAUGAAGUUGGAAUCGCU--- Ochs.nea_C 2400 ---AGUAAU-CGCUGG(UC--AGC-AU)ACAGCGGUGAAUUC--GUU--- Ochs.nea_C 2450 -----------------CCCGGGCCUUGUACACACCGCCCGUCACACCAU Ochs.nea_C 2500 GGGAGCUGG-UCAUACCCAACACCGUU---AGUCU-AACC-(-----AUU Ochs.nea_C 2550 U------)-GG-AGG-ACG-AC-GUCU-AAGG-UAGGGCUAGUGACUGGG Ochs.nea_C 2600 GUGAAGUCGUAACAAGGUAGCCGUACU(GGAA)GGUGNGGNUGGAUCACC Ochs.nea_C 2650 UCCUUG~-|~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ Ochs.nea_C 2700 ~~~~~~~~~~~~~~~~| 2.11.2.1.4 0 x~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~ 2.11.2.1.4 50 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 2.11.2.1.4 100 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~ 2.11.2.1.4 150 ~~~~~~---------~~~~~~~~--~~~~~~~~~~~~~~~~~-~~~~~~~ 2.11.2.1.4 200 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 2.11.2.1.4 250 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~ 2.11.2.1.4 300 ~~~---------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 2.11.2.1.4 350 ~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~-------------------- 2.11.2.1.4 400 -------~~~~~~~~~~~~~~~------~~~~~~~-~~------~~~~~~ 2.11.2.1.4 450 ~~~~~~~~~~~~------------------~~~~~~~~~~~~~~~~~~~~ 2.11.2.1.4 500 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~ 2.11.2.1.4 550 -~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~ 2.11.2.1.4 600 ~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 2.11.2.1.4 650 ~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~-~~~~~-~--~~~~~~ 2.11.2.1.4 700 ~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~-~~~~~~~~~~-~~~~~~~~ 2.11.2.1.4 750 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~--~~~~~~~ 2.11.2.1.4 800 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 2.11.2.1.4 850 ~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~ 2.11.2.1.4 900 ~~~~~~~-~~~~~---~~-~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~ 2.11.2.1.4 950 ~~~~~~~~|~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~-~~~~~~ 2.11.2.1.4 1000 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 2.11.2.1.4 1050 ~~~~~~~~~~~~~~~~~~~~~~~~---------~~~~~~~~~~~~~~-~~ 2.11.2.1.4 1100 ~~~~~--~~~~~~~~~-~~~-~~-~-~~~~~~-~~~~~~~~~----~~~~ 2.11.2.1.4 1150 ~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~ 2.11.2.1.4 1200 ~~~~~~~~~~~~~~--~~~~~~~~~~~-~-~~~~~-~~~~~~~~~--~~~ 2.11.2.1.4 1250 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~- 2.11.2.1.4 1300 ----------~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 2.11.2.1.4 1350 ~~~~~-~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~-- 2.11.2.1.4 1400 --~~-~~~~~~~-~~~~~~~~~~~~~~-----------~--------~~~ 2.11.2.1.4 1450 ~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------------- 2.11.2.1.4 1500 --------------------------------~~~~~~~~~~~~-~~~~~ 2.11.2.1.4 1550 ~~~~~~~~~~-~~~~~~~~~~~|~~~~~~~~~~~~~~~~~~~~~~~~~~~ 2.11.2.1.4 1600 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~ 2.11.2.1.4 1650 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 2.11.2.1.4 1700 ~~~~---~~|~~~-~~~~~~~------~~~~~~~~~---~~~~-~~~~~~ 2.11.2.1.4 1750 ~~-~~~~~~~~~~~~~~-------~~~~~~-----~~--------~~~~~ 2.11.2.1.4 1800 ~~-------------~~~~~~~~~|~~~~~~~~~~~~~~~~~~-~~~~~~ 2.11.2.1.4 1850 ~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 2.11.2.1.4 1900 ~~~~~~~~~~~~~~~~-~~~~~~~-~~~~~-~~~~~~~~~~~~~~~~~~~ 2.11.2.1.4 1950 ~~~~~~~~~----------------------------------------- 2.11.2.1.4 2000 -------------------------------------------------- 2.11.2.1.4 2050 -----------------------------~--~~~~~---~~~~~~~~~~ 2.11.2.1.4 2100 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~-------~~~~~~~ 2.11.2.1.4 2150 ~~~------~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~ 2.11.2.1.4 2200 ~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~ 2.11.2.1.4 2250 ~~~---~~~~~~~~--------------------~----~~~~-~-~~~~ 2.11.2.1.4 2300 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~ 2.11.2.1.4 2350 ~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--- 2.11.2.1.4 2400 ---~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~-~~~~-- 2.11.2.1.4 2450 -----------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 2.11.2.1.4 2500 ~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~ 2.11.2.1.4 2550 ~~~~~--~~~~-~~~~~~~~~~~~~~~-~~~~-~~~~~~~~~~~~~~~~~ 2.11.2.1.4 2600 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 2.11.2.1.4 2650 ~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 2.11.2.1.4 2700 ~~~~~~~~~~~~~~~~| Crpm.phi_C 0 ~~~~~~~~~~AAAUCAUGGAGAG-UU(U-GA)UCCU|GGCUCAGGAUGAA Crpm.phi_C 50 CGC-UGGCGGUAUGCUU--AACACAUGCAAGUCGUACG-AA--------- Crpm.phi_C 100 -------AGUU(UU------------------U-------)AACU----- Crpm.phi_C 150 -----|----------UU--AGU--GGCGGACGGGUGAGUAA-CACGUGA Crpm.phi_C 200 GA-AUCUAC-CCUUAGG--------------------------------- Crpm.phi_C 250 -------------------------------------------------A Crpm.phi_C 300 GGA---------GGGGGAUAACAG------------------------CU Crpm.phi_C 350 G(GAAA)CGG-CUGCUAAUACU-CCAU-AU-------------------- Crpm.phi_C 400 ------------------GCU-------(GAAG---)-------AGU--- Crpm.phi_C 450 ---GAAA-----------------------GG--------------(--- Crpm.phi_C 500 -------GAAA------)---------|-----CCACCUAAGGA-AGA|G Crpm.phi_C 550 -CUCGCGU|-CUGAUUA-GCUAGUUGG-UA-GG(G-UAAGGG)-CCUACC Crpm.phi_C 600 AA|GGCGACGAU-CAGUAGCUG|GUUU(GAGA)GGACGAUCAGC|CACAC Crpm.phi_C 650 UGGGA(CUGAGACACG)GCCCAGA-C--UCC(UA-CG)GG-A--GGCAG- Crpm.phi_C 700 CAGUGGGG-AAUUUUCCG-CAAU-GGGC-(-GCAA)-GCCU-GACGGA|G Crpm.phi_C 750 CAAUACCGCGUGAGGGAUGAAGGCC(---UGUG--)GG-UU--GUAAACC Crpm.phi_C 800 UC|UUUU-CUCAAGGAAGAA----------(--GUUC--)---------- Crpm.phi_C 850 UGACG-GU-ACUU-GAGGAA-UAAGCAUC-GGCU-AACU-CUGUG(CCA- Crpm.phi_C 900 -GCAGCC-GCGGU---AA-)UACAGAG|GAUGCAAGCGUUAU-CCGGAAU Crpm.phi_C 950 UACUGGGC|AUAAAGCGUCUGUAGGUU|GUUUAGUAAG-|UCU-GCUGUU Crpm.phi_C 1000 AAAGACUAGGGC(------------------------------------- Crpm.phi_C 1050 ---------------------------------UUA)ACCCUAG-AA-AA Crpm.phi_C 1100 GCAGU--GGA-AAC-U-GCU-AG-A-CUUGAG-UG-UGGUA-----GAGG Crpm.phi_C 1150 UAGAG|GGAAUUCCUAG-UGUAGCG(GUGAAA)UGCGUAGAUA---UUAG Crpm.phi_C 1200 GAAGAACACCAAU---GGC(GAAA)GC-A-CUUUA-CUG-GGCCA--U-- Crpm.phi_C 1250 -------------------------------------------------- Crpm.phi_C 1300 ----------AACUGACACU-GAG-AGACGACAGCUAGGGGAGCAAAUGG Crpm.phi_C 1350 G(AUU-A-GAUAC)-CCCAGUAG--UC-CUA-GCCGUAAACUAUGGAU-- Crpm.phi_C 1400 --AC-UA|GAUG-UUGUACG------U-----------(--------AUU Crpm.phi_C 1450 AA---)CC------------------------------------------ Crpm.phi_C 1500 ---------------------------------CGUACAGUAUC-GUAGC Crpm.phi_C 1550 (UAAG)GCGU-UAAGUAUCC|C|GCCUGGGAAGUACGCUC(GCAA)GAGU Crpm.phi_C 1600 GAAACUCAAAGGAAUUGACGGGGGCCC-GCACA-------AGCGGU-GGA Crpm.phi_C 1650 GUAUGUGGUUUAAUUCG-(AUGCAACG)CGAAGAACCUUACCAGGGUUUG Crpm.phi_C 1700 ACA----UG|-UC-ACA--AA------UUUUCUU-----(GAA-A-)AAG Crpm.phi_C 1750 AA-AAG---UG--CC---------(UUCG------)---------GGAA- Crpm.phi_C 1800 ---------------|UGUGAACA|C|AGGUGGUGCAUG|GCU-GUCGUC Crpm.phi_C 1850 A|-G-CUCGU|GUC(GUGA)GAUGUUGGG(UUAAGU)CCCGCAACGAGCG Crpm.phi_C 1900 UAACCCUUG|UUUUUA-G-UUGCC-AUCA--------------------- Crpm.phi_C 1950 --------U----------------------------------------- Crpm.phi_C 2000 -------------------------------------------------- Crpm.phi_C 2050 -----------------------------(--UAAGU---)-------UG Crpm.phi_C 2100 |GGCACUUUAAAAAGACUGCCGGU(GAUAA----)--------------- Crpm.phi_C 2150 ---------ACCGGAGGAAGGUGAGGACGACGUC-AA--GUCAGCAUGCC Crpm.phi_C 2200 CCUUACACUCUGGGCUAC-ACACGUACUACAAUGGU--CGAGACAAAAAG Crpm.phi_C 2250 UC----GCAAACUU--------------------(----GUGA-)----- Crpm.phi_C 2300 --------------AAGU-AAGCUAAUC-UUAU-AAACUCGAUCUCAGUU Crpm.phi_C 2350 CGGAUUGCAGGC(--UGCAACUC)GCCUGCAUGAAGUUGGAAUCGCU--- Crpm.phi_C 2400 ---AGUAAU-CGCCGG(UC--AGCUAU)ACGGCGGUGAAUCC--GUU--- Crpm.phi_C 2450 -----------------CCCGGGCCUUGUACACACCGCCCGUCACACCAU Crpm.phi_C 2500 GGAAGCUAG-UCAUACCCAAAGUCGUU---ACCUU-AACC-(-----AUU Crpm.phi_C 2550 C------)-GG-AGG-GGG-GC-GCCU-AAGG-UAGGGUUAGUGACUGGG Crpm.phi_C 2600 GUGAAGUCGUAACAAGGUAGCCGUACU(GGAA)GGUGCGGCUGGAUCACC Crpm.phi_C 2650 UCCUUA~-|~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ Crpm.phi_C 2700 ~~~~~~~~~~~~~~~~| 2.11.2.2 0 x~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~ 2.11.2.2 50 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 2.11.2.2 100 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~ 2.11.2.2 150 ~~~~~~---------~~~~~~~~--~~~~~~~~~~~~~~~~~-~~~~~~~ 2.11.2.2 200 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 2.11.2.2 250 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~ 2.11.2.2 300 ~~~---------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 2.11.2.2 350 ~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~-------------------- 2.11.2.2 400 -------~~~~~~~~~~~~~~~------~~~~~~~-~~------~~~~~~ 2.11.2.2 450 ~~~~~~~~~~~~------------------~~~~~~~~~~~~~~~~~~~~ 2.11.2.2 500 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~ 2.11.2.2 550 -~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~ 2.11.2.2 600 ~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 2.11.2.2 650 ~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~-~~~~~-~--~~~~~~ 2.11.2.2 700 ~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~-~~~~~~~~~~-~~~~~~~~ 2.11.2.2 750 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~--~~~~~~~ 2.11.2.2 800 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 2.11.2.2 850 ~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~ 2.11.2.2 900 ~~~~~~~-~~~~~---~~-~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~ 2.11.2.2 950 ~~~~~~~~|~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~-~~~~~~ 2.11.2.2 1000 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 2.11.2.2 1050 ~~~~~~~~~~~~~~~~~~~~~~~~---------~~~~~~~~~~~~~~-~~ 2.11.2.2 1100 ~~~~~--~~~~~~~~~-~~~-~~-~-~~~~~~-~~~~~~~~~----~~~~ 2.11.2.2 1150 ~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~ 2.11.2.2 1200 ~~~~~~~~~~~~~~--~~~~~~~~~~~-~-~~~~~-~~~~~~~~~--~~~ 2.11.2.2 1250 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~- 2.11.2.2 1300 ----------~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 2.11.2.2 1350 ~~~~~-~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~-- 2.11.2.2 1400 --~~-~~~~~~~-~~~~~~~~~~~~~~-----------~--------~~~ 2.11.2.2 1450 ~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------------- 2.11.2.2 1500 --------------------------------~~~~~~~~~~~~-~~~~~ 2.11.2.2 1550 ~~~~~~~~~~-~~~~~~~~~~~|~~~~~~~~~~~~~~~~~~~~~~~~~~~ 2.11.2.2 1600 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~ 2.11.2.2 1650 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 2.11.2.2 1700 ~~~~---~~|~~~-~~~~~~~------~~~~~~~~~---~~~~-~~~~~~ 2.11.2.2 1750 ~~-~~~~~~~~~~~~~~-------~~~~~~-----~~--------~~~~~ 2.11.2.2 1800 ~~-------------~~~~~~~~~|~~~~~~~~~~~~~~~~~~-~~~~~~ 2.11.2.2 1850 ~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 2.11.2.2 1900 ~~~~~~~~~~~~~~~~-~~~~~~~-~~~~~-~~~~~~~~~~~~~~~~~~~ 2.11.2.2 1950 ~~~~~~~~~----------------------------------------- 2.11.2.2 2000 -------------------------------------------------- 2.11.2.2 2050 -----------------------------~--~~~~~---~~~~~~~~~~ 2.11.2.2 2100 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~-------~~~~~~~ 2.11.2.2 2150 ~~~------~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~ 2.11.2.2 2200 ~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~ 2.11.2.2 2250 ~~~---~~~~~~~~--------------------~----~~~~-~-~~~~ 2.11.2.2 2300 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~ 2.11.2.2 2350 ~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--- 2.11.2.2 2400 ---~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~-~~~~-- 2.11.2.2 2450 -----------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 2.11.2.2 2500 ~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~ 2.11.2.2 2550 ~~~~~--~~~~-~~~~~~~~~~~~~~~-~~~~-~~~~~~~~~~~~~~~~~ 2.11.2.2 2600 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 2.11.2.2 2650 ~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 2.11.2.2 2700 ~~~~~~~~~~~~~~~~| 2.11.2.2.1 0 x~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~ 2.11.2.2.1 50 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 2.11.2.2.1 100 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~ 2.11.2.2.1 150 ~~~~~~---------~~~~~~~~--~~~~~~~~~~~~~~~~~-~~~~~~~ 2.11.2.2.1 200 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 2.11.2.2.1 250 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~ 2.11.2.2.1 300 ~~~---------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 2.11.2.2.1 350 ~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~-------------------- 2.11.2.2.1 400 -------~~~~~~~~~~~~~~~------~~~~~~~-~~------~~~~~~ 2.11.2.2.1 450 ~~~~~~~~~~~~------------------~~~~~~~~~~~~~~~~~~~~ 2.11.2.2.1 500 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~ 2.11.2.2.1 550 -~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~ 2.11.2.2.1 600 ~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 2.11.2.2.1 650 ~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~-~~~~~-~--~~~~~~ 2.11.2.2.1 700 ~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~-~~~~~~~~~~-~~~~~~~~ 2.11.2.2.1 750 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~--~~~~~~~ 2.11.2.2.1 800 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 2.11.2.2.1 850 ~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~ 2.11.2.2.1 900 ~~~~~~~-~~~~~---~~-~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~ 2.11.2.2.1 950 ~~~~~~~~|~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~-~~~~~~ 2.11.2.2.1 1000 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 2.11.2.2.1 1050 ~~~~~~~~~~~~~~~~~~~~~~~~---------~~~~~~~~~~~~~~-~~ 2.11.2.2.1 1100 ~~~~~--~~~~~~~~~-~~~-~~-~-~~~~~~-~~~~~~~~~----~~~~ 2.11.2.2.1 1150 ~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~ 2.11.2.2.1 1200 ~~~~~~~~~~~~~~--~~~~~~~~~~~-~-~~~~~-~~~~~~~~~--~~~ 2.11.2.2.1 1250 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~- 2.11.2.2.1 1300 ----------~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 2.11.2.2.1 1350 ~~~~~-~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~-- 2.11.2.2.1 1400 --~~-~~~~~~~-~~~~~~~~~~~~~~-----------~--------~~~ 2.11.2.2.1 1450 ~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------------- 2.11.2.2.1 1500 --------------------------------~~~~~~~~~~~~-~~~~~ 2.11.2.2.1 1550 ~~~~~~~~~~-~~~~~~~~~~~|~~~~~~~~~~~~~~~~~~~~~~~~~~~ 2.11.2.2.1 1600 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~ 2.11.2.2.1 1650 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 2.11.2.2.1 1700 ~~~~---~~|~~~-~~~~~~~------~~~~~~~~~---~~~~-~~~~~~ 2.11.2.2.1 1750 ~~-~~~~~~~~~~~~~~-------~~~~~~-----~~--------~~~~~ 2.11.2.2.1 1800 ~~-------------~~~~~~~~~|~~~~~~~~~~~~~~~~~~-~~~~~~ 2.11.2.2.1 1850 ~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 2.11.2.2.1 1900 ~~~~~~~~~~~~~~~~-~~~~~~~-~~~~~-~~~~~~~~~~~~~~~~~~~ 2.11.2.2.1 1950 ~~~~~~~~~----------------------------------------- 2.11.2.2.1 2000 -------------------------------------------------- 2.11.2.2.1 2050 -----------------------------~--~~~~~---~~~~~~~~~~ 2.11.2.2.1 2100 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~-------~~~~~~~ 2.11.2.2.1 2150 ~~~------~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~ 2.11.2.2.1 2200 ~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~ 2.11.2.2.1 2250 ~~~---~~~~~~~~--------------------~----~~~~-~-~~~~ 2.11.2.2.1 2300 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~ 2.11.2.2.1 2350 ~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--- 2.11.2.2.1 2400 ---~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~-~~~~-- 2.11.2.2.1 2450 -----------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 2.11.2.2.1 2500 ~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~ 2.11.2.2.1 2550 ~~~~~--~~~~-~~~~~~~~~~~~~~~-~~~~-~~~~~~~~~~~~~~~~~ 2.11.2.2.1 2600 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 2.11.2.2.1 2650 ~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 2.11.2.2.1 2700 ~~~~~~~~~~~~~~~~| Pyrm.par_C 0 .......................-UU(U-GA)UCCU|GGCUCAGGAUGAA Pyrm.par_C 50 CGC-UGGCGGCAUGCUU--AACACAUGCAAGUCGAACG-G---------- Pyrm.par_C 100 UGUUUUUUUUC(UU------------------CG------)GAGAAAAAU Pyrm.par_C 150 CU---|-----------U--UCU--U-CGGACGGGUGAGUAA-CGCGUAA Pyrm.par_C 200 GA-AGCCUA-CCUU------------------------------------ Pyrm.par_C 250 -------------------------------------------------A Pyrm.par_C 300 GGA---------GGGGGACAACAG------------------------CU Pyrm.par_C 350 G(GAAA)CGG-CUGCUAAUACC-CUAU-AA-------------------- Pyrm.par_C 400 ------------------GCU-------(GAGG---)-------AGU--- Pyrm.par_C 450 ---UAAAU----------------------CG--UUUUUAAAAUGA(--- Pyrm.par_C 500 ---GGAGUUAAAUCGAA)---UUAU-A|AAAUUUGGCCUAAGGA-GGG|G Pyrm.par_C 550 -CUUGCGU|-CUGAUUA-GUUAGUUGG-CA-GG(G-UAAAGG)-CCUACC Pyrm.par_C 600 AA|GGCAACGAU-CAGUAGCUG|GUUU(GAGA)GGAUGAUCAGC|CACAC Pyrm.par_C 650 UGGGA(CUGAGACACG)GCCCAGA-C--UCC(UA-CG)GG-A--GGCAG- Pyrm.par_C 700 CAGUGGGG-AAUUUUCCG-CAAU-GGGC-(-GAAA)-GCCU-GACGGA|C Pyrm.par_C 750 GAAUGCCGCGUGGAGGAAGACGGCC(---GGUG--)GG-UU--GUAAACU Pyrm.par_C 800 CC|UUUU-CUCAGAGAAGAA----------(--GUUC--)---------- Pyrm.par_C 850 UGACG-GU-AUCU-GAGGAA-UAAGCAUC-GGCU-AACU-CCGUG(CCA- Pyrm.par_C 900 -GCAGCC-GCGGU---AA-)UACGGAG|GAUGCAAGCGUUAU-CCGGAAU Pyrm.par_C 950 GAUUGGGC|GUAAAGCGUCUGUAGGUG|GUUUCGUAAG-|UCC-GCUGUG Pyrm.par_C 1000 AAAGAGUCCAGC(------------------------------------- Pyrm.par_C 1050 ---------------------------------UUA)ACUGUAG-AU-CC Pyrm.par_C 1100 GCAGU--GGA-AAC-U-ACG-AG-A-CUGGAG-UG-UGGUA-----GGGG Pyrm.par_C 1150 CAGAG|GGAAUUCCCGG-UGUAGCG(GUGAAA)UGCGUAGAUA---UCGG Pyrm.par_C 1200 GAGGAACACCAAU---GGC(G...)..-.-.....-....UACCA--A-- Pyrm.par_C 1250 -------------------------------------------------- Pyrm.par_C 1300 ----------CACUGACACU-GAG-AGACGAAAGCUAAGGGAGCGAAAAG Pyrm.par_C 1350 G(AUU-A-GAUAC)-CCUUGUAG--UC-UUA-GCCGUAAACGAUGGAU-- Pyrm.par_C 1400 --AC-UA|AGUG-CUGCGAG-----AG-----------(--------UUU Pyrm.par_C 1450 UU---)AUG----------------------------------------- Pyrm.par_C 1500 ---------------------------------CUUGCACUGCU-GUAGC Pyrm.par_C 1550 (UAAC)GCGU-UAAGUAUCC|C|GCCUGGGGAGUAUGCUC(GCAA)GGGU Pyrm.par_C 1600 GAAACUCAAAGGAAUUGACGGGGGCCC-GCACA-------AGCGGU-GGA Pyrm.par_C 1650 GCAUGUGGUUUAAUUCG-(AUGCAACG)CGAAGAACCUUACCAGGGCUUG Pyrm.par_C 1700 ACA----UG|-CC-GCG--AA------UUUUUCA-----(GAG-A-)UGA Pyrm.par_C 1750 GA-AAG---UG--NC---------(UUCG------)---------G-AA- Pyrm.par_C 1800 ---------------|CGCGGACA|C|AGGUGGUGCAUG|GCU-GUCGUC Pyrm.par_C 1850 A|-G-CUCGU|GUC(GUGA)GAUGUUGGG(UUAAGU)CCCGCAACGAGCG Pyrm.par_C 1900 CAACCCUUA|UCCUUA-G-UACUA-A-GCC-------------------- Pyrm.par_C 1950 -------------------------------------------------- Pyrm.par_C 2000 -------------------------------------------------- Pyrm.par_C 2050 -----------------------------(--UAAUA---)------GGU Pyrm.par_C 2100 |UAGU--CUAAAGAGACUGCCAGU(GAUAA----)--------------- Pyrm.par_C 2150 ---------ACUGGAGGAAGGUGAGGAUGACGUC-AA--GUCAGCAUGCC Pyrm.par_C 2200 CCUUACGCCCUGGGCGAC-AGACGUGCUACAAUGGC--CGGGACAAAGAG Pyrm.par_C 2250 AU----GCGAUCUC--------------------(----GCGA-)----- Pyrm.par_C 2300 --------------GAGU-AAGCUAAGC-UCAA-AAACCCGGUCUCAGUU Pyrm.par_C 2350 CGGAUUGCAGGC(--UGCAACUC)GCCUGCAUGAAGGUGGAAUCGCU--- Pyrm.par_C 2400 ---AGUAAU-CGCCGG(UC--A-CGAU)ACGGCGGUGAAACU--GUA--- Pyrm.par_C 2450 -----------------CCCGUGCCUUGUACACACCGCCCGUCACACCUU Pyrm.par_C 2500 GAGAGAGGG-UUCAUGCCAAAGUUGUU---ACCCU-AACC-(-----UUC Pyrm.par_C 2550 G------)-GG-AGG-GGG-AU-GCCU-AAGC-AGGUCUGCGCGACUGAG Pyrm.par_C 2600 GUGAAGUCGUAACAAGGUAG.......(....)..AGUCCCUGGAUCACC Pyrm.par_C 2650 UCCUUC~-|~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ Pyrm.par_C 2700 ~~~~~~~~~~~~~~~~| Clmy.par_C 0 .....................AG-UU(U-GA)UACU|GGCUCAGGAUGAA Clmy.par_C 50 CGC-UGGCGGUAUGCCU--AACACAUGCAAGUCGAACG-AA--------- Clmy.par_C 100 ----UUAAUGG(GC------------------AA------)CUAUUAG-- Clmy.par_C 150 -----|----------UU--AGU--GGCGGACGGGUGCGUAA-CGCGUAA Clmy.par_C 200 GA-ACCUAC-CUUU------------------------------------ Clmy.par_C 250 -------------------------------------------------U Clmy.par_C 300 GGA---------GGGGGAUAACUA------------------------CG Clmy.par_C 350 G(GAAA)CUG-UUGCUAAUACC-CCAUAAU-------------------- Clmy.par_C 400 -------...............------(......-).------...... Clmy.par_C 450 ............------------------................(... Clmy.par_C 500 .................).........|................-...|. Clmy.par_C 550 -......U|-CUGAUUA-GCUAGUUGG-UG-GG(G-UAAAAG)-CCUCCC Clmy.par_C 600 AA|GGCCACGAU-CAGUAGCUG|GUUU(GAGA)GGAUGAUCAGC|CACAC Clmy.par_C 650 UGGGA(CUGAGACACG)GCCCAGA-C--UCC(UA-CG)GG-A--GGCAG- Clmy.par_C 700 CAGUGAGG-AAUUUUCCG-CAAU-GGGC-(-GAAA)-GCCU-GACGGA|G Clmy.par_C 750 CAAUACCGCGUGAGGGAAGAAGGCC(---UGUG--)GG-UC--GUAAACC Clmy.par_C 800 UC|UUUN-GGGAGAGAAGAA----------(--UAAA--)---------- Clmy.par_C 850 UGACA-AU-ACCU-GAAGAA-UAAGCUCC-GGCU-AACU-CUGUG(CCA- Clmy.par_C 900 -GCAGCC-GCGGU---AA-)UACAGAG|GGAGCAAGCGUUAU-CCGGAAU Clmy.par_C 950 GAUUGGGC|GUAAAGCGUCUGUAGGUG|GUCUGAAAAG-|UCU-GCUGUC Clmy.par_C 1000 AAAUACCCAGGC(------------------------------------- Clmy.par_C 1050 ---------------------------------UUA)ACCUUGG-GC-AG Clmy.par_C 1100 GCAGU--AG-GUAC-U-UUC-AG-A-CUUGAG-UG-CGGUA-----GAGG Clmy.par_C 1150 UAGUG|GGAAUCCCUAG-CGUAACA(GUGAAA)UGUGUAGAUU---UUAG Clmy.par_C 1200 GGAGAACACCAGC---GGC(GAAG)G.-.-.....-.........--... Clmy.par_C 1250 .................................................- Clmy.par_C 1300 ----------...UGACACU-GAG-AGACGAAAGC............AAG Clmy.par_C 1350 G(AUU-A-GAUAC)-CCUUG...--........CUGUAAACGAUGGAA-- Clmy.par_C 1400 --AC-UA|AGUG-CUGCCGA------------------(----------- Clmy.par_C 1450 -----)-------------------------------------------- Clmy.par_C 1500 ----------------------------------AUGCAGUGCU-GUAGC Clmy.par_C 1550 (UAAC)GCGU-UAAGUUUCC|C|GCCUGGGGAGUAUGCUC(GCAA)GAGU Clmy.par_C 1600 GAAACUCAAAGGAAUUGACGGGGGCCC-GCACA-------AGCGGU-GGA Clmy.par_C 1650 UUAUGUGGUUUAAUUCG-(AUGCAACG)CGAAGAACCUUACCAGGGUUUG Clmy.par_C 1700 ACA----UG|-CU-CAG--CA------AUUUUCC-----(GAG-A-)UGG Clmy.par_C 1750 AU-GAG---UG-CCA---------(GAAA------)---------UGAG- Clmy.par_C 1800 ---------------|CUGAGUCA|C|AGGUGGUGCAUG|GCU-GUCGUC Clmy.par_C 1850 A|-G-CUCGU|GCG(UUGA)CGUGUAUGG(UUAAGU)CCUGCAACGAGCG Clmy.par_C 1900 CAACCCUCG|UCUUUA-G-UUAAA-------------------------- Clmy.par_C 1950 -------------------------------------------------- Clmy.par_C 2000 -------------------------------------------------- Clmy.par_C 2050 -----------------------------(----------)--------- Clmy.par_C 2100 |--UACUCUAAAGAGACUGCCAGU(GC-AA----)--------------- Clmy.par_C 2150 ---------ACUGGAGGAAGGUGAGGAUGACGUC-AA--GUCAGCAUGCC Clmy.par_C 2200 CCUUACACCCUGGGCUAC-ACACGUAAUACAAUGGU--UGGG........ Clmy.par_C 2250 ...---........--------------------(----....-)-.... Clmy.par_C 2300 ...................CAGCAAAUC-UGUU-AAACCCAACCUCAGUU Clmy.par_C 2350 CGGAUGGUAGGC(--UGCAACUC)GCCUGCAUGAAGUCGGAAUUGUU--- Clmy.par_C 2400 ---AGUAAU-CGCCAA(UC--AGC-AU)GUGGCGGUGAAUAC--GUU--- Clmy.par_C 2450 -----------------CCCGGGCCUUGUACACACCGCCCGUCACAUCAA Clmy.par_C 2500 GAAAGGAGA-UUCCUCCCAAAGCCAGU---AGUCU-AACC-(-----GUU Clmy.par_C 2550 U------)-GG-AAG-GCG-CU-GUCA-AAGG-AUGGGUUUCUGAUCAUG Clmy.par_C 2600 ...........................(....)..AGUCCCUGGAUCACC Clmy.par_C 2650 UCCUUC~-|~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ Clmy.par_C 2700 ~~~~~~~~~~~~~~~~| Yamg.uni_C 0 .......................-..(....)....|......GGACGAA Yamg.uni_C 50 CGC-UGGCGGGCUGCCU--AACACAUGCAAGUCGAACG-AG--------- Yamg.uni_C 100 ----CAUUUCA(UUCAUUUCUUCCGGGGAAA---------)-GAAGUG-- Yamg.uni_C 150 -U---|----------GU--AGU--GGCGGACGGGUGCGUAA-CGCGUAA Yamg.uni_C 200 GA-ACCUAC-CUAU------------------------------------ Yamg.uni_C 250 -------------------------------------------------A Yamg.uni_C 300 GGA---------GGGGGAUAACAU------------------------UG Yamg.uni_C 350 G(GAAA)CUG-UUGCUAAUACCCCCUAAAA-------------------- Yamg.uni_C 400 ------------------GCU-------(GAGG---)-------AGU--- Yamg.uni_C 450 ---GAAA-----------------------GGU-------------(--- Yamg.uni_C 500 -------GUAAA-----)---------|----ACCACCGAUAGA-GGG|G Yamg.uni_C 550 -CUUGCGU|-CUGAUUA-GCUAGUUGG-UG-GG(G-UAACGG)-CCUCCC Yamg.uni_C 600 AA|GGCCACGAU-CAGUAGCUG|GUCU(GAGA)GGAUGAUCAGC|CACAC Yamg.uni_C 650 UGGGA(CUGAGACACG)GCCCAGA-C--UCC(UA-CG)GG-A--GGCAG- Yamg.uni_C 700 CAGU-GAGGAAUUUUUCG-CAAU-GGGC-(-GCAA)-GCCU-GACGAA|G Yamg.uni_C 750 CAAUGCCGCGUGUAGGAAGAAGGCC(---UGUG--)GG-UC--GUAAACU Yamg.uni_C 800 GC|UUUU-CUCAGAGAAGAA----------(--GUUC--)---------- Yamg.uni_C 850 UGACG-GU-AUCU-GAGGAA-UAAGCACC-GGCU-AACU-CUGU-(-GCC Yamg.uni_C 900 AGCAGCC-GCGGU---AA-)UACAGAG|GGUGCAAGCGUUGU-CCGGAAU Yamg.uni_C 950 GAUUGGGC|GUAAAGCGUCUGUAGGUG|GCUCGUAAAG-|UCU-AAUGUC Yamg.uni_C 1000 AAAUACCCGGGC(------------------------------------- Yamg.uni_C 1050 ---------------------------------UCA)ACCUUGG-AC-CG Yamg.uni_C 1100 GCAUU--GGA-GAC-U-CAC-GG-A-CUUGAG-UA-CGGUA-----GAGG Yamg.uni_C 1150 CAGAG|GGAAUUCCAAG-UGGAGCG(GUGAAA)UGCGUAGAGA---UUUG Yamg.uni_C 1200 GAGGAACGCCAGU---GGC(GAAG)GC-G-CUCUG-CUG-GGCCG--A-- Yamg.uni_C 1250 -------------------------------------------------- Yamg.uni_C 1300 ----------AACUGACACU-GAG-AGACGAAAGCUGGGGGAGCGAAAAG Yamg.uni_C 1350 G(AUU-A-GAUAC)-CCUAGUAG--UC-CCA-GCCGUAAACUAUGGAG-- Yamg.uni_C 1400 --AC-UA|AGUG-CUGC---------------------(--------CAC Yamg.uni_C 1450 AA---)-------------------------------------------- Yamg.uni_C 1500 ------------------------------------GCAGUGCU-GUAUC Yamg.uni_C 1550 (UAAC)GCGU-UAAGUCUCC|C|GCCUGGAGAGUACGGCU(GGAA)AGAU Yamg.uni_C 1600 GAAACUCAAAGGAAUUGACGGGGACCC-GCACA-------AGCGGU-GGA Yamg.uni_C 1650 UUAUGUGGAUUAAUUCG-(AUGCAACG)CGAAGAACCUUACCAGGGUUUG Yamg.uni_C 1700 ACA----UG|-UC-AAG--AA------CUUCCCA-----(GAA-A-)UGG Yamg.uni_C 1750 GA-AGG---UG--CC---------(-AAC------)---------GGAG- Yamg.uni_C 1800 ---------------|CUUGAACA|C|AGGUGGUGCAUG|GCU-GUCGUC Yamg.uni_C 1850 A|-G-CUCGU|GCU(GUGA)AGUGUAUAG(UUAAGU)CUCAUAACGAGCG Yamg.uni_C 1900 CAACCCUCG|UCUUUA-G-UUGCC-------------------------- Yamg.uni_C 1950 -------------------------------------------------- Yamg.uni_C 2000 -------------------------------------------------- Yamg.uni_C 2050 -----------------------------(--AGUUU---)--------- Yamg.uni_C 2100 |GGUUCUCUAAAGAGACUGCCAGU(G-UAA----)--------------- Yamg.uni_C 2150 ---------GCUGGAGGAAGGUGAGGAUGACGUC-AA--GUCAGCAUGCC Yamg.uni_C 2200 CCUUACACCCUGGGCUUC-ACACGUAAUACAAUGGU--UGGGACAAUCAG Yamg.uni_C 2250 AA----GCGAUCUC--------------------(----GUGA-)----- Yamg.uni_C 2300 --------------GAGC-UAGCGGAUC-UGUU-AAACCCAACCUCAGUU Yamg.uni_C 2350 CGGAUUGUAGGC(--UGCAACUC)GCCUACAUGAAGCCGGAAUCGCU--- Yamg.uni_C 2400 ---AGUAAU-CGCCAG(UC--AGC-AU)AUGGCGGUGAAUAC--GUU--- Yamg.uni_C 2450 -----------------CCCGGGUCUUGUACACACCGCCCGUCACACCCA Yamg.uni_C 2500 GGAAGCUGG-UCCUGCUCCAAGUCGUU---ACCCU-AACC-(-----UUC Yamg.uni_C 2550 G------)-GG-AGG-GGG-GC-GCCU-AAAG-CAGGGCUAGUGACCAGG Yamg.uni_C 2600 GUGAAGUCGUAACAAGGUAG.......(....)..AGUCCCUGGAUCACC Yamg.uni_C 2650 UCCUUC~-|~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ Yamg.uni_C 2700 ~~~~~~~~~~~~~~~~| Gonm.pec_C 0 .......................-..(....)....|..........GAA Gonm.pec_C 50 CGC-UGGCGGCAUGCUU--AACACAUGCAAGUCGAACG-AG--------- Gonm.pec_C 100 ----CAUUUCA(UU-------------------C------)UGAAAUG-- Gonm.pec_C 150 -U---|----------GU--AGU--GGCGGACGGGUGAGUAA-CGCGUAA Gonm.pec_C 200 GA-ACCUAC-CUAU------------------------------------ Gonm.pec_C 250 -------------------------------------------------C Gonm.pec_C 300 GGA---------GGGGGAUAACAU------------------------UG Gonm.pec_C 350 G(GAAA)CUG-UUGCUAAUACC-CCAUAAA-------------------- Gonm.pec_C 400 -------A----------GCU-------(GAGG---)-------AGU--- Gonm.pec_C 450 ---GAAA-----------------------GGU-------------(--- Gonm.pec_C 500 -------UAAA------)---------|----ACCGCCAAUAGA-GGG|G Gonm.pec_C 550 -CUUGCGU|-CUGAUUA-GCUAGUUGG-UGGGG(G-UAAU-G)-CCUCCC Gonm.pec_C 600 AA|GGCCACGAU-CAAUAGCUG|GUCU(GAGA)GGAUGAUCAGC|CACAC Gonm.pec_C 650 UGGGA(CUGAGACACG)GCCCAGA-C--UCC(UA-CG)GG-A--GGCAG- Gonm.pec_C 700 CAGUGAG-GAAUUUUUCG-CAAU-GGGC-(-GAAA)-GCCU-GACGAA|G Gonm.pec_C 750 CAAUGCCGCGUGCAGGUAGAAGGCC(---UGUG--)GG-UU--GUAAACU Gonm.pec_C 800 GC|UUUU-CUCAGAGAAGAA----------(--GUUC--)---------- Gonm.pec_C 850 UGACG-GU-AUCU-GAGGAA-UAAGCACC-GGCU-AACU-CUGUG(CC-- Gonm.pec_C 900 AGCAGCC-GCGGU---AA-)UACAGAG|GGUGCAAGCGUUGU-CCGGAAU Gonm.pec_C 950 GAUUGGGC|GUAAAGCGUCUGUAGGUG|GCUCGUAAAG-|UCU-AAUGUC Gonm.pec_C 1000 AAAUACCCGGGC(------------------------------------- Gonm.pec_C 1050 ---------------------------------UCA)ACCUUGG-AU-CG Gonm.pec_C 1100 GCAUU---GAGCAC-U-CAC-GG-A-CUUGAG-UA-CGGUA-----GAGG Gonm.pec_C 1150 CAGAG|GGAAUUCCAAG-UGGAGCG(GUGAAA)UGCGUAGAGA---UUUG Gonm.pec_C 1200 GAGGAACACCAGU---GGC(GAAG)GC-G-CUCUG-CUG-GGCCG--A-- Gonm.pec_C 1250 -------------------------------------------------- Gonm.pec_C 1300 ----------AACUGACACU-GAG-AGACGAAAGCUGGGGGAGCGAAAAG Gonm.pec_C 1350 G(AUU-A-GAUAC)-CCUAGUAG--UC-CCA-GCCGUAAACUAUGGAG-- Gonm.pec_C 1400 --AC-UA|AGUG-CUGC---------------------(--------UUU Gonm.pec_C 1450 UU---)U------------------------------------------- Gonm.pec_C 1500 ------------------------------------GCAGUGCU-GUAGC Gonm.pec_C 1550 (UAAC)GCGU-UAAGUCUCC|C|GCCUGGGGAGUAUGCUC(GCAA)GAGU Gonm.pec_C 1600 GAAACUCAAAGGAAUUGACGGGGGCCC-GCACA-------AGCGGU-GGA Gonm.pec_C 1650 UUAUGUGGUUUAAUUCG-(AUGCAACG)CGAAGAACCUUACCAGGGUUUG Gonm.pec_C 1700 ACA----UG|-UC-AAG--AA------CUCUUCA-----(GAA-A-)UGG Gonm.pec_C 1750 GG-AGN---NNG------------(UAAC------)---------GGAA- Gonm.pec_C 1800 ---------------|CUUGAACA|C|AGGUGGUGCAUG|GCU-GUCGUC Gonm.pec_C 1850 A|-G-CUCGU|GCU(GUGA)AGUGUAUAG(UUAAGU)CUCAUAACGAGCG Gonm.pec_C 1900 CAACCCUCG|UCUUUA-G-UUGCC-------------------------- Gonm.pec_C 1950 -------------------------------------------------- Gonm.pec_C 2000 -------------------------------------------------- Gonm.pec_C 2050 -----------------------------(--AGUUU---)--------- Gonm.pec_C 2100 |GGUUCUCUAAAGAGACUGCCAGU(G-UAA----)--------------- Gonm.pec_C 2150 ---------GCUGGAGGAAGGUGAGGAUGACGUC-AA--GUCAGCAUGCC Gonm.pec_C 2200 CCUUACACCCUGGGCUUC-ACACGUAAUACAAUGGU--UGGGACAAUCAG Gonm.pec_C 2250 AA----GCGAUCUC--------------------(----GUGA-)----- Gonm.pec_C 2300 --------------GAGC-AAGCGGAUC-UGUG-AAACCCAACCUCAGUU Gonm.pec_C 2350 CGGAUUGUAGGC(--UGCAACUC)GCCUACAUGAAGCCGGAAUCGCU--- Gonm.pec_C 2400 ---AGUAAU-CGCCAG(UC--AG-UAU)AUGGCGGUGAAUAC--GUU--- Gonm.pec_C 2450 -----------------CCCGGGUCUUGUACACACCGCCCGUCACACCCC Gonm.pec_C 2500 GGAAGCUGG-UUCUGCUCCAAGUCGUU---ACCCU-AACC-(-----UUU Gonm.pec_C 2550 UU-----)-GG-AGG-GGG-GC-GCCU-AAAG-CAGGGCUAGUGACCAGG Gonm.pec_C 2600 GUGAAGUCGUAACAAGGUA........(....)..AGUCCCUGGAUCACC Gonm.pec_C 2650 UCCUUC~-|~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ Gonm.pec_C 2700 ~~~~~~~~~~~~~~~~| 2.11.2.2.2 0 x~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~ 2.11.2.2.2 50 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 2.11.2.2.2 100 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~ 2.11.2.2.2 150 ~~~~~~---------~~~~~~~~--~~~~~~~~~~~~~~~~~-~~~~~~~ 2.11.2.2.2 200 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 2.11.2.2.2 250 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~ 2.11.2.2.2 300 ~~~---------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 2.11.2.2.2 350 ~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~-------------------- 2.11.2.2.2 400 -------~~~~~~~~~~~~~~~------~~~~~~~-~~------~~~~~~ 2.11.2.2.2 450 ~~~~~~~~~~~~------------------~~~~~~~~~~~~~~~~~~~~ 2.11.2.2.2 500 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~ 2.11.2.2.2 550 -~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~ 2.11.2.2.2 600 ~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 2.11.2.2.2 650 ~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~-~~~~~-~--~~~~~~ 2.11.2.2.2 700 ~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~-~~~~~~~~~~-~~~~~~~~ 2.11.2.2.2 750 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~--~~~~~~~ 2.11.2.2.2 800 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 2.11.2.2.2 850 ~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~ 2.11.2.2.2 900 ~~~~~~~-~~~~~---~~-~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~ 2.11.2.2.2 950 ~~~~~~~~|~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~-~~~~~~ 2.11.2.2.2 1000 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 2.11.2.2.2 1050 ~~~~~~~~~~~~~~~~~~~~~~~~---------~~~~~~~~~~~~~~-~~ 2.11.2.2.2 1100 ~~~~~--~~~~~~~~~-~~~-~~-~-~~~~~~-~~~~~~~~~----~~~~ 2.11.2.2.2 1150 ~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~ 2.11.2.2.2 1200 ~~~~~~~~~~~~~~--~~~~~~~~~~~-~-~~~~~-~~~~~~~~~--~~~ 2.11.2.2.2 1250 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~- 2.11.2.2.2 1300 ----------~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 2.11.2.2.2 1350 ~~~~~-~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~-- 2.11.2.2.2 1400 --~~-~~~~~~~-~~~~~~~~~~~~~~-----------~--------~~~ 2.11.2.2.2 1450 ~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------------- 2.11.2.2.2 1500 --------------------------------~~~~~~~~~~~~-~~~~~ 2.11.2.2.2 1550 ~~~~~~~~~~-~~~~~~~~~~~|~~~~~~~~~~~~~~~~~~~~~~~~~~~ 2.11.2.2.2 1600 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~ 2.11.2.2.2 1650 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 2.11.2.2.2 1700 ~~~~---~~|~~~-~~~~~~~------~~~~~~~~~---~~~~-~~~~~~ 2.11.2.2.2 1750 ~~-~~~~~~~~~~~~~~-------~~~~~~-----~~--------~~~~~ 2.11.2.2.2 1800 ~~-------------~~~~~~~~~|~~~~~~~~~~~~~~~~~~-~~~~~~ 2.11.2.2.2 1850 ~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 2.11.2.2.2 1900 ~~~~~~~~~~~~~~~~-~~~~~~~-~~~~~-~~~~~~~~~~~~~~~~~~~ 2.11.2.2.2 1950 ~~~~~~~~~----------------------------------------- 2.11.2.2.2 2000 -------------------------------------------------- 2.11.2.2.2 2050 -----------------------------~--~~~~~---~~~~~~~~~~ 2.11.2.2.2 2100 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~-------~~~~~~~ 2.11.2.2.2 2150 ~~~------~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~ 2.11.2.2.2 2200 ~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~ 2.11.2.2.2 2250 ~~~---~~~~~~~~--------------------~----~~~~-~-~~~~ 2.11.2.2.2 2300 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~ 2.11.2.2.2 2350 ~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--- 2.11.2.2.2 2400 ---~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~-~~~~-- 2.11.2.2.2 2450 -----------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 2.11.2.2.2 2500 ~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~ 2.11.2.2.2 2550 ~~~~~--~~~~-~~~~~~~~~~~~~~~-~~~~-~~~~~~~~~~~~~~~~~ 2.11.2.2.2 2600 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 2.11.2.2.2 2650 ~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 2.11.2.2.2 2700 ~~~~~~~~~~~~~~~~| Clst.ehr_C 0 ............NAAGGAUCCAG-UU(U-GA)UCCU|GGCUCAGGAUGAA Clst.ehr_C 50 CGC-UGGCGGCAUGCCU--AACACAUGCAAGUCGUACG-GA--------- Clst.ehr_C 100 -------ACCA(UUC-----------------AU------)UGGU----- Clst.ehr_C 150 -----|----------UC--AGU--GGCGGACGGGUGAGUAA-CGCGUAA Clst.ehr_C 200 GA-ACCUGC-CCCU------------------------------------ Clst.ehr_C 250 -------------------------------------------------U Clst.ehr_C 300 GGC---------GGGGGACAACCA------------------------CU Clst.ehr_C 350 G(GAAA)CGG-UGGCUAAUACC-CCAU-AU-------------------- Clst.ehr_C 400 ------------------GCU-------(GAGG---)-------AGU--- Clst.ehr_C 450 ---AAAA-----------------------GGA-------------(--- Clst.ehr_C 500 -------GGAA------)---------|----UCCACCAAGGGA-GGG|G Clst.ehr_C 550 -CUUGCGU|-CUGAUUA-GCUAGUUGG-UG-AG(G-UAAUGG)-CUUACC Clst.ehr_C 600 AA|GGCGACGAU-CAGUAGCUG|GUCU(GAGA)GGAUGACCAGC|CACAC Clst.ehr_C 650 UGGGA(CUGAGACACG)GUCCAGA-C--UCC(UA-CG)GG-A--GGCAG- Clst.ehr_C 700 CAGUGGGG-AAUUUUCCG-CAAU-GGGC-(-GAAA)-GCCU-GACGGA|G Clst.ehr_C 750 CAAUGCCGCGUGGGGGAAUAAGGCC(---CACG--)GG-UC--GUAAACC Clst.ehr_C 800 CC|UUUU-CUCAGAGAAGAA----------(--GGGA--)---------- Clst.ehr_C 850 UGACG-GU-AUCU-GGGGAA-UAAGCAUC-GGCU-AACU-CUGUG(CCA- Clst.ehr_C 900 -GCAGCC-GCGGU---AA-)GACAGAG|GAUGCAAGCGUUAU-CCGGAAU Clst.ehr_C 950 GAUUGGGC|GUAAAGCGUCUGUAGGUG|GCUUCUUAAG-|UCU-GCUGUC Clst.ehr_C 1000 AAAUCCCCGGGC(------------------------------------- Clst.ehr_C 1050 ---------------------------------UUA)ACCCUGG-CC-AG Clst.ehr_C 1100 GCGGU--GGA-GAC-U-ACU-AG-A-CUUGAG-UA-CGGUA-----GGGG Clst.ehr_C 1150 CAGAG|GGAAUUUCCGG-UGGAGCG(GUGAAA)UGCGUAGAGA---UCGG Clst.ehr_C 1200 AAAGAACACCAAA---GGC(GAAG)GC-A-CUCGU-CUG-GGCCG--A-- Clst.ehr_C 1250 -------------------------------------------------- Clst.ehr_C 1300 ----------GANUGACACU-GAG-AGACAGAGACUAGGGGAGCGAAUGG Clst.ehr_C 1350 G(AUU-A-GAUAC)-CCCAGUAG--UC-CUA-GCCGUAAACGAUGGAU-- Clst.ehr_C 1400 --AC-UA|AGGC-CUGUGCG------U-----------(--------AUC Clst.ehr_C 1450 GA---)CC------------------------------------------ Clst.ehr_C 1500 ---------------------------------CGUACAGUGCU-GUAGC Clst.ehr_C 1550 (UAAC)GCGU-UAAGUAUUC|C|GCCUGGGGAGUACGCUC(GCAA)GAGU Clst.ehr_C 1600 GAAACUCAAAGGAAUUGACGGGGGCCC-GCACA-------AGCGUU-GGA Clst.ehr_C 1650 GCAUGUGGUUUAAUUCG-(AUGCAACG)CGAAGAACCUUACCAGGGCUUA Clst.ehr_C 1700 ACA----UG|-CC-GCG--AA------GCCCCCU-----(GAA-A-)GGG Clst.ehr_C 1750 GG-GAG---UG--CC---------(UUCG------)---------G-AG- Clst.ehr_C 1800 ---------------|CGCGGACA|C|AGGUAAUGCAUG|GCU-GUCGUC Clst.ehr_C 1850 A|-G-CUCGU|GCC(GUGA)GGUGUUGGG(UUAAGU)CCCGCAACGAGCG Clst.ehr_C 1900 UAACCCUCG|UGUUUA-G-UUGCC-AGCAG-------------------- Clst.ehr_C 1950 --------U----------------------------------------- Clst.ehr_C 2000 -------------------------------------------------- Clst.ehr_C 2050 -----------------------------(--UCCGG---)------CCG Clst.ehr_C 2100 |GGAACCCUAGACAGACUGCCAGU(GAUAA----)--------------- Clst.ehr_C 2150 ---------GCCGGAGGAAGGUGAGGAUGACGUC-AA--GUCAGCAUGCC Clst.ehr_C 2200 CCUUACGCCCUGGGCCAC-ACACGUGCUACAAUGGU--CGGGACAAUGGG Clst.ehr_C 2250 AU----GCUACCCC--------------------(----GCGA-)----- Clst.ehr_C 2300 --------------GCGC-AAGCCAACC-UCAA-AAACCCGGCCUCAGUU Clst.ehr_C 2350 CGGAUUGCAGGC(--UGCAACUC)GCCUGCAUGAAGGCGGAAUCGCU--- Clst.ehr_C 2400 ---AGUAAU-CGCAGG(UC--AG-CAU)ACUGCGGUGAAUAC--GUU--- Clst.ehr_C 2450 -----------------CCCGGGCCUUGUACACACCGCCCGUCACACUAU Clst.ehr_C 2500 GGGAGCUGG-UUUUGCCCGAAGUCGUU---ACUCC-AACC-(-----GCA Clst.ehr_C 2550 -------)-GA-GGG-GGA-UCCGGAU-GCCG-ACGGGCUAGUGACUGGA Clst.ehr_C 2600 GUGAAGUCGUAACAAGGUAGCCGUACU(GGAA)GGAGUCCCUGGAUCACC Clst.ehr_C 2650 UCCUUC~-|~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ Clst.ehr_C 2700 ~~~~~~~~~~~~~~~~| Spgn.com_C 0 .......................-..(....)....|............. Spgn.com_C 50 .................................................. Spgn.com_C 100 ...........(.A------------------GU------)GG-U----- Spgn.com_C 150 -GUUU|----------UC--AGU--GGCGGACGGGUGAGUAA-CGCGUAA Spgn.com_C 200 GA-ACCUGC-CCUU------------------------------------ Spgn.com_C 250 -------------------------------------------------G Spgn.com_C 300 GGA---------GGGGGACAACAG------------------------CU Spgn.com_C 350 G(GAAA)CGG-UUGCUAAUACC-CCAU-AG-------------------- Spgn.com_C 400 ------------------GCU-------(GAGG---)-------AGC--- Spgn.com_C 450 ---AAAA-----------------------GGA-------------(--- Spgn.com_C 500 -------GGAA------)---------|----UCCGCCCAAGGA-GGG|G Spgn.com_C 550 -CUUNCGU|-CUGAUUA-GCUAGUUGG-UG-AG(G-CAAUGG)-CUUACC Spgn.com_C 600 AA|GGCGACGAU-CAGUAGCUG|NNCU(GAGA)GG.........|..... Spgn.com_C 650 .....(..........)..........-...(..-..)..-.--...... Spgn.com_C 700 ..................-..........(-....).....-......|. Spgn.com_C 750 .........................(..-......).....--....... Spgn.com_C 800 ..|...........................(........).......... Spgn.com_C 850 .....-.................................-.....(.... Spgn.com_C 900 .......-.....---..-).......|..............-....... Spgn.com_C 950 ........|..................|..........-|...-...... Spgn.com_C 1000 ............(..................................... Spgn.com_C 1050 ........................---------...)..........-.. Spgn.com_C 1100 .....--.........-...-..-.-......-.........----.... Spgn.com_C 1150 .....|...........-.......(......)..........---.... Spgn.com_C 1200 ..............--...(....)..-.-.....-.........--... Spgn.com_C 1250 .................................................- Spgn.com_C 1300 ----------..........-............................. Spgn.com_C 1350 .(...-.......).........--.......................-- Spgn.com_C 1400 --..-..|....-..............-----------(--------... Spgn.com_C 1450 ..---)...............................------------- Spgn.com_C 1500 --------------------------------............-..... Spgn.com_C 1550 (....)....-.........|.|.................(....).... Spgn.com_C 1600 ..............................................-... Spgn.com_C 1650 ..................(........)...................... Spgn.com_C 1700 ....---..|...-.......------.........---(...-..)... Spgn.com_C 1750 ..-..............-------(.....-----).--------..... Spgn.com_C 1800 ..-------------|........|.|............|...-...... Spgn.com_C 1850 .|..-.....|...(....).........(......)............. Spgn.com_C 1900 .........|......-.......-.....-................... Spgn.com_C 1950 .........----------------------------------------- Spgn.com_C 2000 -------------------------------------------------- Spgn.com_C 2050 -----------------------------(--.....---)......... Spgn.com_C 2100 |.......................(.....----).-------....... Spgn.com_C 2150 ...------............................--........... Spgn.com_C 2200 ..................-..................-............ Spgn.com_C 2250 ...---........--------------------(----....-)-.... Spgn.com_C 2300 ............................-..................... Spgn.com_C 2350 ............(--........).......................--- Spgn.com_C 2400 ---.............(...-......)...............-....-- Spgn.com_C 2450 -----------------................................. Spgn.com_C 2500 ...........................---...........(........ Spgn.com_C 2550 .....--)...-...............-....-................. Spgn.com_C 2600 ...........................(....)................. Spgn.com_C 2650 .......-|....................................~~~~~ Spgn.com_C 2700 ~~~~~~~~~~~~~~~~| Polt.com_C 0 .......................-..(....)....|............. Polt.com_C 50 .................................................. Polt.com_C 100 ...........(.A------------------GU------)GG-U----- Polt.com_C 150 -GUUU|----------UU--AGU--GGCGGACGGGUGAGUAA-CGCGUAA Polt.com_C 200 GA-ACCUGC-CCUU------------------------------------ Polt.com_C 250 -------------------------------------------------G Polt.com_C 300 GGA---------GGGGGACAACAG------------------------CU Polt.com_C 350 G(GAAA)CGG-UUGCUAAUACC-CCAU-AG-------------------- Polt.com_C 400 ------------------GCU-------(GAGG---)-------AGC--- Polt.com_C 450 ---AAAA-----------------------GGA-------------(--- Polt.com_C 500 -------GGAA------)---------|----UCCGCCCAAGGA-GGG|G Polt.com_C 550 -CUUGCGU|-CUGAUUA-GCUAGUUGG-UG-AG(G-CAAUGG)-CUUACC Polt.com_C 600 AA|GGCGACGAU-CAGUAGCUG|GUCU(GAGA)GG.........|..... Polt.com_C 650 .....(..........)..........-...(..-..)..-.--...... Polt.com_C 700 ..................-..........(-....).....-......|. Polt.com_C 750 .........................(..-......).....--....... Polt.com_C 800 ..|...........................(........).......... Polt.com_C 850 .....-.................................-.....(.... Polt.com_C 900 .......-.....---..-).......|..............-....... Polt.com_C 950 ........|..................|..........-|...-...... Polt.com_C 1000 ............(..................................... Polt.com_C 1050 ........................---------...)..........-.. Polt.com_C 1100 .....--.........-...-..-.-......-.........----.... Polt.com_C 1150 .....|...........-.......(......)..........---.... Polt.com_C 1200 ..............--...(....)..-.-.....-.........--... Polt.com_C 1250 .................................................- Polt.com_C 1300 ----------..........-............................. Polt.com_C 1350 .(...-.......).........--.......................-- Polt.com_C 1400 --..-..|....-..............-----------(--------... Polt.com_C 1450 ..---)...............................------------- Polt.com_C 1500 --------------------------------............-..... Polt.com_C 1550 (....)....-.........|.|.................(....).... Polt.com_C 1600 ..............................................-... Polt.com_C 1650 ..................(........)...................... Polt.com_C 1700 ....---..|...-.......------.........---(...-..)... Polt.com_C 1750 ..-..............-------(.....-----).--------..... Polt.com_C 1800 ..-------------|........|.|............|...-...... Polt.com_C 1850 .|..-.....|...(....).........(......)............. Polt.com_C 1900 .........|......-.......-.....-................... Polt.com_C 1950 .........----------------------------------------- Polt.com_C 2000 -------------------------------------------------- Polt.com_C 2050 -----------------------------(--.....---)......... Polt.com_C 2100 |.......................(.....----).-------....... Polt.com_C 2150 ...------............................--........... Polt.com_C 2200 ..................-..................-............ Polt.com_C 2250 ...---........--------------------(----....-)-.... Polt.com_C 2300 ............................-..................... Polt.com_C 2350 ............(--........).......................--- Polt.com_C 2400 ---.............(...-......)...............-....-- Polt.com_C 2450 -----------------................................. Polt.com_C 2500 ...........................---...........(........ Polt.com_C 2550 .....--)...-...............-....-................. Polt.com_C 2600 ...........................(....)................. Polt.com_C 2650 .......-|....................................~~~~~ Polt.com_C 2700 ~~~~~~~~~~~~~~~~| Thdm.del_C 0 .......................-..(....)....|............. Thdm.del_C 50 .................................................. Thdm.del_C 100 ...........(.A------------------GU------)GG-U----- Thdm.del_C 150 -GUUU|----------UC--AGU--GGCGGACGGGUGAGUAA-CGCGUAA Thdm.del_C 200 GA-ACCUGC-CCUU------------------------------------ Thdm.del_C 250 -------------------------------------------------G Thdm.del_C 300 GGA---------GGGGGACAACAG------------------------CU Thdm.del_C 350 G(GAAA)CGG-UUGCUAAUACC-CCAU-AA-------------------- Thdm.del_C 400 ------------------GCU-------(GAGG---)-------AGC--- Thdm.del_C 450 ---GAAA-----------------------GGA-------------(--- Thdm.del_C 500 -------GGAA------)---------|----UCCACCCAAGGA-GGG|G Thdm.del_C 550 -CUUGCGU|-CUGAUUA-GCUAGUUGG-UG-AG(G-CAAUGG)-CUUACC Thdm.del_C 600 AA|GGCGACGAU-CAGUAGCUG|NUCU(GAGA)GG.........|..... Thdm.del_C 650 .....(..........)..........-...(..-..)..-.--...... Thdm.del_C 700 ..................-..........(-....).....-......|. Thdm.del_C 750 .........................(..-......).....--....... Thdm.del_C 800 ..|...........................(........).......... Thdm.del_C 850 .....-.................................-.....(.... Thdm.del_C 900 .......-.....---..-).......|..............-....... Thdm.del_C 950 ........|..................|..........-|...-...... Thdm.del_C 1000 ............(..................................... Thdm.del_C 1050 ........................---------...)..........-.. Thdm.del_C 1100 .....--.........-...-..-.-......-.........----.... Thdm.del_C 1150 .....|...........-.......(......)..........---.... Thdm.del_C 1200 ..............--...(....)..-.-.....-.........--... Thdm.del_C 1250 .................................................- Thdm.del_C 1300 ----------..........-............................. Thdm.del_C 1350 .(...-.......).........--.......................-- Thdm.del_C 1400 --..-..|....-..............-----------(--------... Thdm.del_C 1450 ..---)...............................------------- Thdm.del_C 1500 --------------------------------............-..... Thdm.del_C 1550 (....)....-.........|.|.................(....).... Thdm.del_C 1600 ..............................................-... Thdm.del_C 1650 ..................(........)...................... Thdm.del_C 1700 ....---..|...-.......------.........---(...-..)... Thdm.del_C 1750 ..-..............-------(.....-----).--------..... Thdm.del_C 1800 ..-------------|........|.|............|...-...... Thdm.del_C 1850 .|..-.....|...(....).........(......)............. Thdm.del_C 1900 .........|......-.......-.....-................... Thdm.del_C 1950 .........----------------------------------------- Thdm.del_C 2000 -------------------------------------------------- Thdm.del_C 2050 -----------------------------(--.....---)......... Thdm.del_C 2100 |.......................(.....----).-------....... Thdm.del_C 2150 ...------............................--........... Thdm.del_C 2200 ..................-..................-............ Thdm.del_C 2250 ...---........--------------------(----....-)-.... Thdm.del_C 2300 ............................-..................... Thdm.del_C 2350 ............(--........).......................--- Thdm.del_C 2400 ---.............(...-......)...............-....-- Thdm.del_C 2450 -----------------................................. Thdm.del_C 2500 ...........................---...........(........ Thdm.del_C 2550 .....--)...-...............-....-................. Thdm.del_C 2600 ...........................(....)................. Thdm.del_C 2650 .......-|....................................~~~~~ Thdm.del_C 2700 ~~~~~~~~~~~~~~~~| Pisu.sat_C 0 ........GAAGCUCAUGGAGAG-UU(U-GA)UC-U|GGCUCAGGAUGAA Pisu.sat_C 50 CGC-UGGCGGCAUGCUU--UACACAUGCAAGUCGGACG-GG--------- Pisu.sat_C 100 --------AAG(UGG-----------------UG------)UUU------ Pisu.sat_C 150 -----|----------CC--AGU--GGCGAACGGGUGAGUAA-CGCGUAA Pisu.sat_C 200 GA-ACCUGC-CCUU------------------------------------ Pisu.sat_C 250 -------------------------------------------------G Pisu.sat_C 300 GGA---------GGGGGACAACAG------------------------CU Pisu.sat_C 350 G(GAAA)CGG-CUGCUAAUACC-CCGU-AG-------------------- Pisu.sat_C 400 ------------------GCU-------(GAGG---)-------AGC--- Pisu.sat_C 450 ---GAAA-----------------------GGA-------------(--- Pisu.sat_C 500 -------GGAA------)---------|----UCCGCCCAAGGA-GGG|G Pisu.sat_C 550 -CUCGCGU|-CUGAUU.................(.-......)....... Pisu.sat_C 600 ..|.........-.........|....(....)...........|..... Pisu.sat_C 650 .....(..........)..........-...(..-..)..-.--...... Pisu.sat_C 700 ..................-..........(-....).....-......|. Pisu.sat_C 750 .........................(..-......).....--....... Pisu.sat_C 800 ..|...........................(........).......... Pisu.sat_C 850 .....-.................................-.....(.... Pisu.sat_C 900 .......-.....---..-).......|..............-....... Pisu.sat_C 950 ........|..................|..........-|...-...... Pisu.sat_C 1000 ............(..................................... Pisu.sat_C 1050 ........................---------...)..........-.. Pisu.sat_C 1100 .....--.........-...-..-.-......-.........----.... Pisu.sat_C 1150 .....|...........-.......(......)..........---.... Pisu.sat_C 1200 ..............--...(....)..-.-.....-.........--... Pisu.sat_C 1250 .................................................- Pisu.sat_C 1300 ----------..........-............................. Pisu.sat_C 1350 .(...-.......).........--.......................-- Pisu.sat_C 1400 --..-..|....-..............-----------(--------... Pisu.sat_C 1450 ..---)...............................------------- Pisu.sat_C 1500 --------------------------------............-..... Pisu.sat_C 1550 (....)....-.........|.|.................(....).... Pisu.sat_C 1600 ..............................................-... Pisu.sat_C 1650 ..................(........)...................... Pisu.sat_C 1700 ....---..|...-.......------.........---(...-..)... Pisu.sat_C 1750 ..-..............-------(.....-----).--------..... Pisu.sat_C 1800 ..-------------|........|.|............|...-...... Pisu.sat_C 1850 .|..-.....|...(....).........(......)............. Pisu.sat_C 1900 .........|......-.......-.....-................... Pisu.sat_C 1950 .........----------------------------------------- Pisu.sat_C 2000 -------------------------------------------------- Pisu.sat_C 2050 -----------------------------(--.....---)......... Pisu.sat_C 2100 |.......................(.....----).-------....... Pisu.sat_C 2150 ...------............................--........... Pisu.sat_C 2200 ..................-..................-............ Pisu.sat_C 2250 ...---........--------------------(----....-)-.... Pisu.sat_C 2300 ............................-..................... Pisu.sat_C 2350 ............(--........).......................--- Pisu.sat_C 2400 ---.............(...-......)...............-....-- Pisu.sat_C 2450 -----------------................................. Pisu.sat_C 2500 ...........................---...........(........ Pisu.sat_C 2550 .....--)...-...............-....-................. Pisu.sat_C 2600 ...........................(....)................. Pisu.sat_C 2650 .......-|....................................~~~~~ Pisu.sat_C 2700 ~~~~~~~~~~~~~~~~| Epif.vir_C 0 ...........UAUAAUGGAGAG-UU(U-GA)UCCU|GGCUCAGGAUGAA Epif.vir_C 50 CGC-UGGCGGCAUGCUU--AACACAUGCAAGUCGGACG-GG--------- Epif.vir_C 100 --------AAG(UGG-----------------UG------)UUU------ Epif.vir_C 150 -----|----------CC--GGU--GGCGGACGGGUGAGUAA-CGCGUAA Epif.vir_C 200 GA-ACCUGC-CCCU------------------------------------ Epif.vir_C 250 -------------------------------------------------G Epif.vir_C 300 GGA---------GGGGAACAACAG------------------------CC Epif.vir_C 350 G(GAAA)CGG-CUGCUAAUACC-UCGU-AA-------------------- Epif.vir_C 400 ------------------GCU-------(GAGG---)-------AGC--- Epif.vir_C 450 ---UAAA-----------------------GGA-------------(--- Epif.vir_C 500 -------GGAA------)---------|----UCCGCCCGAGGA-GGG|G Epif.vir_C 550 -CUUGCGU|-CUGAUUA-GCUAGUUGG-UG-GG(G-CAAUAG)-CUUACC Epif.vir_C 600 AA|GGCGAUGAU-CAGUAGCUG|GUCC(GAGA)GGAUGAUCAGC|CACAC Epif.vir_C 650 UGGGA(CUGAGACACG)GCCCAGA-C--UCC(UA-CG)GG-A--GGCAG- Epif.vir_C 700 CAGUGGGG-AAUUUUCCG-CAAU-GGGC-(-GAAA)-GC-U-GACGGA|G Epif.vir_C 750 CAAUGCCGCGUGGAGGUAGAAGGCC(---CACG--)GG-UC--GUGAACU Epif.vir_C 800 UC|UUUU-ACCGAAGAAGAA----------(--GCAA--)---------- Epif.vir_C 850 UGACG-GU-AUCU-GGGGAA-UAAGCAUC-GGCU-AACU-CUGUG(CCA- Epif.vir_C 900 -GCAGCC-GCGGU---AA-)GACAGAG|GAUGCAAGCGUUAU-CCGGAAU Epif.vir_C 950 GAUUGGGC|GUAAAGCGUCUGUAGGUG|GCUUUUUAUG-|UCC-GCCGUC Epif.vir_C 1000 AAAUACCAGGGC(------------------------------------- Epif.vir_C 1050 ---------------------------------UUA)ACCCCGG-AC-AG Epif.vir_C 1100 GCGGU--GGA-AAC-U-AUC-UA-G-CUGGAG-UA-CGGUA-----GGGG Epif.vir_C 1150 CAGAG|GGAAUUUCCGG-UGGAGCG(GUGAAA)UGUUUAGAGA---UCGG Epif.vir_C 1200 GAAGAACACCAAC---GGC(GAAA)GC-A-CUCUG-CUG-GGCCG--A-- Epif.vir_C 1250 -------------------------------------------------- Epif.vir_C 1300 ----------CACUGACACU-UAG-AGACGAAAGCUAGGGGAGCGAAUGG Epif.vir_C 1350 G(AUU-A-GAUAC)-CCCAGUAG--UC-CUA-GCCGUAAACGAUGGAU-- Epif.vir_C 1400 --AC-UA|GGCG-CUGUGCG------U-----------(--------AUC Epif.vir_C 1450 GA---)CC------------------------------------------ Epif.vir_C 1500 ---------------------------------CGUGCAGUGCU-GUAGC Epif.vir_C 1550 (UAAC)GCGU-UAAGUAUCC|C|GCCUGGGGAGUAUGUUC(GCAA)GAAU Epif.vir_C 1600 GAAACUCAAAGGAAUUGACGGGGGCCC-GCACA-------AGCGGU-GGA Epif.vir_C 1650 GCAUGUGGUUUAAUUCG-(AUGCAAAG)CGAAGAACCUUACCAGGGCUUG Epif.vir_C 1700 ACA----UG|-CC-GCG--AA------UCCUCUU-----(GAA-A-)GAG Epif.vir_C 1750 AG-GGG---UG--CC---------(UUCG------)---------GGAA- Epif.vir_C 1800 ---------------|CGCGGACA|C|AGGUGGUGCAUG|GCU-GUCGUC Epif.vir_C 1850 A|-G-CUCGU|GCC(GUAA)GGUGUUGGG(UUAAGU)CCCGUAACGAGCG Epif.vir_C 1900 CAACCCUCG|UGUUUA-G-UUGCC-CUCG--------------------- Epif.vir_C 1950 -------------------------------------------------- Epif.vir_C 2000 -------------------------------------------------- Epif.vir_C 2050 -----------------------------(--UUUAA---)----UUUGU Epif.vir_C 2100 |GGAACCCUGAACAGACUGCCGGC(GAGAA----)--------------- Epif.vir_C 2150 ---------GCCAGAGGAAGGUGAGGAUGACGUC-AA--GUCAUCAUGCC Epif.vir_C 2200 CCUUAUGCCCUGGGCGAC-ACACGUGCUACAACGGC--CGGGACAAAGGG Epif.vir_C 2250 UC----GCGAUCCC--------------------(----GCGA-)----- Epif.vir_C 2300 --------------GGGU-GAGCUAACC-CCAA-AAACCCGUCCUCAGUU Epif.vir_C 2350 CGGAUUGCAGAC(--UGCAACUC)GUCUGCAUGAAGCCGGAAUCGCU--- Epif.vir_C 2400 ---AGUAAU-CGCCGG(UC--AGCCAU)ACGGCGGUGAAUUA--GUU--- Epif.vir_C 2450 -----------------CCCGGGCCUUGUACACACCGCCCGUCACACUAU Epif.vir_C 2500 GGAAGCUGG-CCAUGCCCGAAGUCGUU---AUCUU-AACC-(-----AAA Epif.vir_C 2550 A------)-GG-AGG-GGG-AU-GCCG-AAGG-CAGGGCUAGUGACUGGA Epif.vir_C 2600 GUGAAGUCGUAACAAGGUAGCCGUACU(GGAA)GGUGCAGCUGGAUCACC Epif.vir_C 2650 UCCUUUU-|~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ Epif.vir_C 2700 ~~~~~~~~~~~~~~~~| Nico.ta2_C 0 ~~~~~~~~~~~UCUCAUGGAGAG-UU(C-GA)UCCU|GGCUCAGGAUGAA Nico.ta2_C 50 CGC-UGGCGGCAUGCUU--AACACAUGCAAGUCGGACG-GG--------- Nico.ta2_C 100 --------AAG(UGG-----------------UG------)UUU------ Nico.ta2_C 150 -----|----------CC--AGU--GGCGGACGGGUGAGUAA-CGCGUAA Nico.ta2_C 200 GA-ACCUGC-CCUU------------------------------------ Nico.ta2_C 250 -------------------------------------------------G Nico.ta2_C 300 GGA---------GGGGAACAACAG------------------------CU Nico.ta2_C 350 G(GAAA)CGG-CUGCUAAUACC-CCGU-AG-------------------- Nico.ta2_C 400 ------------------GCU-------(GAGG---)-------AGC--- Nico.ta2_C 450 ---AAAA-----------------------GGA-------------(--- Nico.ta2_C 500 -------GGAA------)---------|----UCCGCCCGAGGA-GGG|G Nico.ta2_C 550 -CUCGCGU|-CUGAUUA-GCUAGUUGG-UG-AG(G-CAAUAG)-CUUACC Nico.ta2_C 600 AA|GGCGAUGAU-CAGUAGCUG|GUCC(GAGA)GGAUGAUCAGC|CACAC Nico.ta2_C 650 UGGGA(CUGAGACACG)GCCCAGA-C--UCC(UA-CG)GG-A--GGCAG- Nico.ta2_C 700 CAGUGGGG-AAUUUUCCG-CAAU-GGGC-(-GAAA)-GC-U-GACGGA|G Nico.ta2_C 750 CAAUGCCGCGUGGAGGUAGAAGGCC(---CACG--)GG-UC--GUGAACU Nico.ta2_C 800 UC|UUUU-CCCGGAGAAGAA----------(--GCAA--)---------- Nico.ta2_C 850 UGACG-GU-AUCU-GGGGAA-UAAGCAUC-GGCU-AACU-CUGUG(CCA- Nico.ta2_C 900 -GCAGCC-GCGGU---AA-)UACAGAG|GAUGCAAGCGUUAU-CCGGAAU Nico.ta2_C 950 GAUUGGGC|GUAAAGCGUCUGUAGGUG|GCUUUUUAAG-|UCC-GCCGUC Nico.ta2_C 1000 AAAUCCCAGGGC(------------------------------------- Nico.ta2_C 1050 ---------------------------------UCA)ACCCUGG-AC-AG Nico.ta2_C 1100 GCGGU--GGA-AAC-U-ACC-AA-G-CUGGAG-UA-CGGUA-----GGGG Nico.ta2_C 1150 CAGAG|GGAAUUUCCGG-UGGAGCG(GUGAAA)UGCGUAGAGA---UCGG Nico.ta2_C 1200 AAAGAACACCAAC---GGC(GAAA)GC-A-CUCUG-CUG-GGCCG--A-- Nico.ta2_C 1250 -------------------------------------------------- Nico.ta2_C 1300 ----------CACUGACACU-GAG-AGACGAAAGCUAGGGGAGCGAAUGG Nico.ta2_C 1350 G(AUU-A-GAUAC)-CCCAGUAG--UC-CUA-GCCGUAAACGAUGGAU-- Nico.ta2_C 1400 --AC-UA|GGCG-CUGUGCG------U-----------(--------AUC Nico.ta2_C 1450 GA---)CC------------------------------------------ Nico.ta2_C 1500 ---------------------------------CGUGCAGUGCU-GUAGC Nico.ta2_C 1550 (UAAC)GCGU-UAAGUAUCC|C|GCCUGGGGAGUACGUUC(GCAA)GAAU Nico.ta2_C 1600 GAAACUCAAAGGAAUUGACGGGGGCCC-GCACA-------AGCGGU-GGA Nico.ta2_C 1650 GCAUGUGGUUUAAUUCG-(AUGCAAAG)CGAAGAACCUUACCAGGGCUUG Nico.ta2_C 1700 ACA----UG|-CC-GCG--AA------UCCUCUU-----(GAA-A-)GAG Nico.ta2_C 1750 AG-GGG---UG--CC---------(UUCG------)---------GGAA- Nico.ta2_C 1800 ---------------|CGCGGACA|C|AGGUGGUGCAUG|GCU-GUCGUC Nico.ta2_C 1850 A|-G-CUCGU|GCC(GUAA)GGUGUUGGG(UUAAGU)CCCGCAACGAGCG Nico.ta2_C 1900 CAACCCUCG|UGUUUA-G-UUGCC-AUCG--------------------- Nico.ta2_C 1950 -------------------------------------------------- Nico.ta2_C 2000 -------------------------------------------------- Nico.ta2_C 2050 -----------------------------(--UUGAG---)------UUU Nico.ta2_C 2100 |GGAACCCUGAACAGACUGCCGGU(GAUAA----)--------------- Nico.ta2_C 2150 ---------GCCGGAGGAAGGUGAGGAUGACGUC-AA--GUCAUCAUGCC Nico.ta2_C 2200 CCUUAUGCCCUGGGCGAC-ACACGUGCUACAAUGGC--CGGGACAAAGGG Nico.ta2_C 2250 UC----GCGAUCCC--------------------(----GCGA-)----- Nico.ta2_C 2300 --------------G-GU-GAGCUAACC-CCAA-AAACCCGUCCUCAGUU Nico.ta2_C 2350 CGGAUUGCAGGC(--UGCAACUC)GCCUGCAUGAAGCCGGAAUCGCU--- Nico.ta2_C 2400 ---AGUAAU-CGCCGG(UC--AGCCAU)ACGGCGGUGAAUU..-....-- Nico.ta2_C 2450 -----------------................................. Nico.ta2_C 2500 ...........................---...........(........ Nico.ta2_C 2550 .....--)...-...............-....-................. Nico.ta2_C 2600 ...........................(....)................. Nico.ta2_C 2650 .......-|....................................~~~~~ Nico.ta2_C 2700 ~~~~~~~~~~~~~~~~| Nico.ta3_C 0 ...........UCUCAUGGAGAG-UU(C-GA)UCCU|GGCUCAGGAUGAA Nico.ta3_C 50 CGC-UGGCGGCAUGCUU--AACACAUGCAAGUCGGACG-GG--------- Nico.ta3_C 100 --------AAG(UGG-----------------UG------)UUU------ Nico.ta3_C 150 -----|----------CC--AGU--GGCGGACGGGUGAGUAA-CGCGUAA Nico.ta3_C 200 GA-ACCUGC-CCUU------------------------------------ Nico.ta3_C 250 -------------------------------------------------G Nico.ta3_C 300 GGA---------GGGGAACAACAG------------------------CU Nico.ta3_C 350 G(GAAA)CGG-CUGCUAAUACC-CCGU-AG-------------------- Nico.ta3_C 400 ------------------GCU-------(GAGG---)-------AGC--- Nico.ta3_C 450 ---AAAA-----------------------GGA-------------(--- Nico.ta3_C 500 -------GGAA------)---------|----UCCGCCCGAGGA-GGG|G Nico.ta3_C 550 -CUCGCGU|-CUGAUUA-GCUAGUUGG-UG-AG(G-CAAUAG)-CUUACC Nico.ta3_C 600 AA|GGCGAUGAU-CAGUAGCUG|GUCC(GAGA)GGAUGAUCAGC|CACAC Nico.ta3_C 650 UGGGA(CUGAGACACG)GCCCAGA-C--UCC(UA-CG)GG-A--GGCAG- Nico.ta3_C 700 CAGUGGGG-AAUUUUCCG-CAAU-GGGC-(-GAAA)-GC-U-GACGGA|G Nico.ta3_C 750 CAAUGCCGCGUGGAGGUAGAAGGCC(---CACG--)GG-UC--GUGAACU Nico.ta3_C 800 UC|UUUU-CCCGGAGAAGAA----------(--GCAA--)---------- Nico.ta3_C 850 UGACG-GU-AUCU-GGGGAA-UAAGCAUC-GGCU-AACU-CUGUG(CCA- Nico.ta3_C 900 -GCAGCC-GCGGU---AA-)UACAGAG|GAUGCAAGCGUUAU-CCGGAAU Nico.ta3_C 950 GAUUGGGC|GUAAAGCGUCUGUAGGUG|GCUUUUUAAG-|UCC-GCCGUC Nico.ta3_C 1000 AAAUCCCAGGGC(------------------------------------- Nico.ta3_C 1050 ---------------------------------UCA)ACCCUGG-AC-AG Nico.ta3_C 1100 GCGGU--GGA-AAC-U-ACC-AA-G-CUGGAG-UA-CGGUA-----GGGG Nico.ta3_C 1150 CAGAG|GGAAUUUCCGG-UGGAGCG(GUGAAA)UGCGUAGAGA---UCGG Nico.ta3_C 1200 AAAGAACACCAAC---GGC(GAAA)GC-A-CUCUG-CUG-GGCCG--A-- Nico.ta3_C 1250 -------------------------------------------------- Nico.ta3_C 1300 ----------CACUGACACU-GAG-AGACGAAAGCUAGGGGAGCGAAUGG Nico.ta3_C 1350 G(AUU-A-GAUAC)-CCCAGUAG--UC-CUA-GCCGUAAACGAUGGAU-- Nico.ta3_C 1400 --AC-UA|GGCG-CUGUGCG------U-----------(--------AUC Nico.ta3_C 1450 GA---)CC------------------------------------------ Nico.ta3_C 1500 ---------------------------------CGUGCAGUGCU-GUAGC Nico.ta3_C 1550 (UAAC)GCGU-UAAGUAUCC|C|GCCUGGGGAGUACGUUC(GCAA)GAAU Nico.ta3_C 1600 GAAACUCAAAGGAAUUGACGGGGGCCC-GCACA-------AGCGGU-GGA Nico.ta3_C 1650 GCAUGUGGUUUAAUUCG-(AUGCAAAG)CGAAGAACCUUACCAGGGCUUG Nico.ta3_C 1700 ACA----UG|-CC-GCG--AA------UCCUCUU-----(GAA-A-)GAG Nico.ta3_C 1750 AG-GGG---UG--CC---------(UUCG------)---------GGAA- Nico.ta3_C 1800 ---------------|CGCGGACA|C|AGGUGGUGCAUG|GCU-GUCGUC Nico.ta3_C 1850 A|-G-CUCGU|GCC(GUAA)GGUGUUGGG(UUAAGU)CCCGCAACGAGCG Nico.ta3_C 1900 CAACCCUCG|UGUUUA-G-UUGCC-AUCG--------------------- Nico.ta3_C 1950 -------------------------------------------------- Nico.ta3_C 2000 -------------------------------------------------- Nico.ta3_C 2050 -----------------------------(--UUGAG---)------UUU Nico.ta3_C 2100 |GGAACCCUGAACAGACUGCCGGU(GAUAA----)--------------- Nico.ta3_C 2150 ---------GCCGGAGGAAGGUGAGGAUGACGUC-AA--GUCAUCAUGCC Nico.ta3_C 2200 CCUUAUGCCCUGGGCGAC-ACACGUGCUACAAUGGC--CGGGACAAAGGG Nico.ta3_C 2250 UC----GCGAUCCC--------------------(----GCGA-)----- Nico.ta3_C 2300 --------------G-GU-GAGCUAACC-CCAA-AAACCCGUCCUCAGUU Nico.ta3_C 2350 CGGAUUGCAGGC(--UGCAACUC)GCCUGCAUGAAGCCGGAAUCGCU--- Nico.ta3_C 2400 ---AGUAAU-CGCCGG(UC--AGCCAU)ACGGCGGUGAAUU..-....-- Nico.ta3_C 2450 -----------------................................. Nico.ta3_C 2500 ...........................---...........(........ Nico.ta3_C 2550 .....--)...-...............-....-................. Nico.ta3_C 2600 ...........................(....)................. Nico.ta3_C 2650 .......-|....................................~~~~~ Nico.ta3_C 2700 ~~~~~~~~~~~~~~~~| Nico.ta4_C 0 ...........UCUCAUGGAGAG-UU(C-GA)UCCU|GGCUCAGGAUGAA Nico.ta4_C 50 CGC-UGGCGGCAUGCUU--AACACAUGCAAGUCGGACG-GG--------- Nico.ta4_C 100 --------AAG(UGG-----------------UG------)UUU------ Nico.ta4_C 150 -----|----------CC--AGU--GGCGGACGGGUGAGUAA-CGCGUAA Nico.ta4_C 200 GA-ACCUGC-CCUU------------------------------------ Nico.ta4_C 250 -------------------------------------------------G Nico.ta4_C 300 GGA---------GGGGAACAACAG------------------------CU Nico.ta4_C 350 G(GAAA)CGG-CUGCUAAUACC-CCGU-AG-------------------- Nico.ta4_C 400 ------------------GCU-------(GAGG---)-------AGC--- Nico.ta4_C 450 ---AAAA-----------------------GGA-------------(--- Nico.ta4_C 500 -------GGAA------)---------|----UCCGCCCGAGGA-GGG|G Nico.ta4_C 550 -CUCGCGU|-CUGAUUA-GCUAGUUGG-UG-AG(G-CAAUAG)-CUUACC Nico.ta4_C 600 AA|GGCGAUGAU-CAGUAGCUG|GUCC(GAGA)GGAUGAUCAGC|CACAC Nico.ta4_C 650 UGGGA(CUGAGACACG)GCCCAGA-C--UCC(UA-CG)GG-A--GGCAG- Nico.ta4_C 700 CAGUGGGG-AAUUUUCCG-CAAU-GGGC-(-GAAA)-GC-U-GACGGA|G Nico.ta4_C 750 CAAUGCCGCGUGGAGGUAGAAGGCC(---CACG--)GG-UC--GUGAACU Nico.ta4_C 800 UC|UUUU-CCCGGAGAAGAA----------(--GCAA--)---------- Nico.ta4_C 850 UGACG-GU-AUCU-GGGGAA-UAAGCAUC-GGCU-AACU-CUGUG(CCA- Nico.ta4_C 900 -GCAGCC-GCGGU---AA-)UACAGAG|GAUGCAAGCGUUAU-CCGGAAU Nico.ta4_C 950 GAUUGGGC|GUAAAGCGUCUGUAGGUG|GCUUUUUAAG-|UCC-GCCGUC Nico.ta4_C 1000 AAAUCCCAGGGC(------------------------------------- Nico.ta4_C 1050 ---------------------------------UCA)ACCCUGG-AC-AG Nico.ta4_C 1100 GCGGU--GGA-AAC-U-ACC-AA-G-CUGGAG-UA-CGGUA-----GGGG Nico.ta4_C 1150 CAGAG|GGAAUUUCCGG-UGGAGCG(GUGAAA)UGCGUAGAGA---UCGG Nico.ta4_C 1200 AAAGAACACCAAC---GGC(GAAA)GC-A-CUCUG-CUG-GGCCG--A-- Nico.ta4_C 1250 -------------------------------------------------- Nico.ta4_C 1300 ----------CACUGACACU-GAG-AGACGAAAGCUAGGGGAGCGAAUGG Nico.ta4_C 1350 G(AUU-A-GAUAC)-CCCAGUAG--UC-CUA-GCCGUAAACGAUGGAU-- Nico.ta4_C 1400 --AC-UA|GGCG-CUGUGCG------U-----------(--------AUC Nico.ta4_C 1450 GA---)CC------------------------------------------ Nico.ta4_C 1500 ---------------------------------CGUGCAGUGCU-GUAGC Nico.ta4_C 1550 (UAAC)GCGU-UAAGUAUCC|C|GCCUGGGGAGUACGUUC(GCAA)GAAU Nico.ta4_C 1600 GAAACUCAAAGGAAUUGACGGGGGCCC-GCACA-------AGCGGU-GGA Nico.ta4_C 1650 GCAUGUGGUUUAAUUCG-(AUGCAAAG)CGAAGAACCUUACCAGGGCUUG Nico.ta4_C 1700 ACA----UG|-CC-GCG--AA------UCCUCUU-----(GAA-A-)GAG Nico.ta4_C 1750 AG-GGG---UG--CC---------(UUCG------)---------GGAA- Nico.ta4_C 1800 ---------------|CGCGGACA|C|AGGUGGUGCAUG|GCU-GUCGUC Nico.ta4_C 1850 A|-G-CUCGU|GCC(GUAA)GGUGUUGGG(UUAAGU)CCCGCAACGAGCG Nico.ta4_C 1900 CAACCCUCG|UGUUUA-G-UUGCC-AUCG--------------------- Nico.ta4_C 1950 -------------------------------------------------- Nico.ta4_C 2000 -------------------------------------------------- Nico.ta4_C 2050 -----------------------------(--UUGAG---)------UUU Nico.ta4_C 2100 |GGAACCCUGAACAGACUGCCGGU(GAUAA----)--------------- Nico.ta4_C 2150 ---------GCCGGAGGAAGGUGAGGAUGACGUC-AA--GUCAUCAUGCC Nico.ta4_C 2200 CCUUAUGCCCUGGGCGAC-ACACGUGCUACAAUGGC--CGGGACAAAGGG Nico.ta4_C 2250 UC----GCGAUCCC--------------------(----GCGA-)----- Nico.ta4_C 2300 --------------G-GU-GAGCUAACC-CCAA-AAACCCGUCCUCAGUU Nico.ta4_C 2350 CGGAUUGCAGGC(--UGCAACUC)GCCUGCAUGAAGCCGGAAUCGCU--- Nico.ta4_C 2400 ---AGUAAU-CGCCGG(UC--AGCCAU)ACGGCGGUGAAUU..-....-- Nico.ta4_C 2450 -----------------................................. Nico.ta4_C 2500 ...........................---...........(........ Nico.ta4_C 2550 .....--)...-...............-....-................. Nico.ta4_C 2600 ...........................(....)................. Nico.ta4_C 2650 .......-|....................................~~~~~ Nico.ta4_C 2700 ~~~~~~~~~~~~~~~~| Nico.ta5_C 0 ...........UCUCAUGGAGAG-UU(C-GA)UCCU|GGCUCAGGAUGAA Nico.ta5_C 50 CGC-UGGCGGCAUGCUU--AACACAUGCAAGUCGGACG-GG--------- Nico.ta5_C 100 --------AAG(UGG-----------------UG------)UUU------ Nico.ta5_C 150 -----|----------CC--AGU--GGCGGACGGGUGAGUAA-CGCGUAA Nico.ta5_C 200 GA-ACCUGC-CCUU------------------------------------ Nico.ta5_C 250 -------------------------------------------------G Nico.ta5_C 300 GGA---------GGGGAACAACAG------------------------CU Nico.ta5_C 350 G(GAAA)CGG-CUGCUAAUACC-CCGU-AG-------------------- Nico.ta5_C 400 ------------------GCU-------(GAGG---)-------AGC--- Nico.ta5_C 450 ---AAAA-----------------------GGA-------------(--- Nico.ta5_C 500 -------GGAA------)---------|----UCCGCCCGAGGA-GGG|G Nico.ta5_C 550 -CUCGCGU|-CUGAUUA-GCUAGUUGG-UG-AG(G-CAAUAG)-CUUACC Nico.ta5_C 600 AA|GGCGAUGAU-CAGUAGCUG|GUCC(GAGA)GGAUGAUCAGC|CACAC Nico.ta5_C 650 UGGGA(CUGAGACACG)GCCCAGA-C--UCC(UA-CG)GG-A--GGCAG- Nico.ta5_C 700 CAGUGGGG-AAUUUUCCG-CAAU-GGGC-(-GAAA)-GC-U-GACGGA|G Nico.ta5_C 750 CAAUGCCGCGUGGAGGUAGAAGGCC(---CACG--)GG-UC--GUGAACU Nico.ta5_C 800 UC|UUUU-CCCGGAGAAGAA----------(--GCAA--)---------- Nico.ta5_C 850 UGACG-GU-AUCU-GGGGAA-UAAGCAUC-GGCU-AACU-CUGUG(CCA- Nico.ta5_C 900 -GCAGCC-GCGGU---AA-)UACAGAG|GAUGCAAGCGUUAU-CCGGAAU Nico.ta5_C 950 GAUUGGGC|GUAAAGCGUCUGUAGGUG|GCUUUUUAAG-|UCC-GCCGUC Nico.ta5_C 1000 AAAUCCCAGGGC(------------------------------------- Nico.ta5_C 1050 ---------------------------------UCA)ACCCUGG-AC-AG Nico.ta5_C 1100 GCGGU--GGA-AAC-U-ACC-AA-G-CUGGAG-UA-CGGUA-----GGGG Nico.ta5_C 1150 CAGAG|GGAAUUUCCGG-UGGAGCG(GUGAAA)UGCGUAGAGA---UCGG Nico.ta5_C 1200 AAAGAACACCAAC---GGC(GAAA)GC-A-CUCUG-CUG-GGCCG--A-- Nico.ta5_C 1250 -------------------------------------------------- Nico.ta5_C 1300 ----------CACUGACACU-GAG-AGACGAAAGCUAGGGGAGCGAAUGG Nico.ta5_C 1350 G(AUU-A-GAUAC)-CCCAGUAG--UC-CUA-GCCGUAAACGAUGGAU-- Nico.ta5_C 1400 --AC-UA|GGCG-CUGUGCG------U-----------(--------AUC Nico.ta5_C 1450 GA---)CC------------------------------------------ Nico.ta5_C 1500 ---------------------------------CGUGCAGUGCU-GUAGC Nico.ta5_C 1550 (UAAC)GCGU-UAAGUAUCC|C|GCCUGGGGAGUACGUUC(GCAA)GAAU Nico.ta5_C 1600 GAAACUCAAAGGAAUUGACGGGGGCCC-GCACA-------AGCGGU-GGA Nico.ta5_C 1650 GCAUGUGGUUUAAUUCG-(AUGCAAAG)CGAAGAACCUUACCAGGGCUUG Nico.ta5_C 1700 ACA----UG|-CC-GCG--AA------UCCUCUU-----(GAA-A-)GAG Nico.ta5_C 1750 AG-GGG---UG--CC---------(UUCG------)---------GGAA- Nico.ta5_C 1800 ---------------|CGCGGACA|C|AGGUGGUGCAUG|GCU-GUCGUC Nico.ta5_C 1850 A|-G-CUCGU|GCC(GUAA)GGUGUUGGG(UUAAGU)CCCGCAACGAGCG Nico.ta5_C 1900 CAACCCUCG|UGUUUA-G-UUGCC-AUCG--------------------- Nico.ta5_C 1950 -------------------------------------------------- Nico.ta5_C 2000 -------------------------------------------------- Nico.ta5_C 2050 -----------------------------(--UUGAG---)------UUU Nico.ta5_C 2100 |GGAACCCUGAACAGACUGCCGGU(GAUAA----)--------------- Nico.ta5_C 2150 ---------GCCGGAGGAAGGUGAGGAUGACGUC-AA--GUCAUCAUGCC Nico.ta5_C 2200 CCUUAUGCCCUGGGCGAC-ACACGUGCUACAAUGGC--CGGGACAAAGGG Nico.ta5_C 2250 UC----GCGAUCCC--------------------(----GCGA-)----- Nico.ta5_C 2300 --------------G-GU-GAGCUAACC-CCAA-AAACCCGUCCUCAGUU Nico.ta5_C 2350 CGGAUUGCAGGC(--UGCAACUC)GCCUGCAUGAAGCCGGAAUCGCU--- Nico.ta5_C 2400 ---AGUAAU-CGCCGG(UC--AGCCAU)ACGGCGGUGAAUU..-....-- Nico.ta5_C 2450 -----------------................................. Nico.ta5_C 2500 ...........................---...........(........ Nico.ta5_C 2550 .....--)...-...............-....-................. Nico.ta5_C 2600 ...........................(....)................. Nico.ta5_C 2650 .......-|....................................~~~~~ Nico.ta5_C 2700 ~~~~~~~~~~~~~~~~| Nico.ta6_C 0 ...........UCUCAUGGAGAG-UU(C-GA)UCCU|GGCUCAGGAUGAA Nico.ta6_C 50 CGC-UGGCGGCAUGCUU--AACACAUGCAAGUCGGACG-GG--------- Nico.ta6_C 100 --------AAG(UGG-----------------UG------)UUU------ Nico.ta6_C 150 -----|----------CC--AGU--GGCGGACGGGUGAGUAA-CGCGUAA Nico.ta6_C 200 GA-ACCUGC-CCUU------------------------------------ Nico.ta6_C 250 -------------------------------------------------G Nico.ta6_C 300 GGA---------GGGGAACAACAG------------------------CU Nico.ta6_C 350 G(GAAA)CGG-CUGCUAAUACC-CCGU-AG-------------------- Nico.ta6_C 400 ------------------GCU-------(GAGG---)-------AGC--- Nico.ta6_C 450 ---AAAA-----------------------GGA-------------(--- Nico.ta6_C 500 -------GGAA------)---------|----UCCGCCCGAGGA-GGG|G Nico.ta6_C 550 -CUCGCGU|-CUGAUUA-GCUAGUUGG-UG-AG(G-CAAUAG)-CUUACC Nico.ta6_C 600 AA|GGCGAUGAU-CAGUAGCUG|GUCC(GAGA)GGAUGAUCAGC|CACAC Nico.ta6_C 650 UGGGA(CUGAGACACG)GCCCAGA-C--UCC(UA-CG)GG-A--GGCAG- Nico.ta6_C 700 CAGUGGGG-AAUUUUCCG-CAAU-GGGC-(-GAAA)-GC-U-GACGGA|G Nico.ta6_C 750 CAAUGCCGCGUGGAGGUAGAAGGCC(---CACG--)GG-UC--GUGAACU Nico.ta6_C 800 UC|UUUU-CCCGGAGAAGAA----------(--GCAA--)---------- Nico.ta6_C 850 UGACG-GU-AUCU-GGGGAA-UAAGCAUC-GGCU-AACU-CUGUG(CCA- Nico.ta6_C 900 -GCAGCC-GCGGU---AA-)UACAGAG|GAUGCAAGCGUUAU-CCGGAAU Nico.ta6_C 950 GAUUGGGC|GUAAAGCGUCUGUAGGUG|GCUUUUUAAG-|UCC-GCCGUC Nico.ta6_C 1000 AAAUCCCAGGGC(------------------------------------- Nico.ta6_C 1050 ---------------------------------UCA)ACCCUGG-AC-AG Nico.ta6_C 1100 GCGGU--GGA-AAC-U-ACC-AA-G-CUGGAG-UA-CGGUA-----GGGG Nico.ta6_C 1150 CAGAG|GGAAUUUCCGG-UGGAGCG(GUGAAA)UGCGUAGAGA---UCGG Nico.ta6_C 1200 AAAGAACACCAAC---GGC(GAAA)GC-A-CUCUG-CUG-GGCCG--A-- Nico.ta6_C 1250 -------------------------------------------------- Nico.ta6_C 1300 ----------CACUGACACU-GAG-AGACGAAAGCUAGGGGAGCGAAUGG Nico.ta6_C 1350 G(AUU-A-GAUAC)-CCCAGUAG--UC-CUA-GCCGUAAACGAUGGAU-- Nico.ta6_C 1400 --AC-UA|GGCG-CUGUGCG------U-----------(--------AUC Nico.ta6_C 1450 GA---)CC------------------------------------------ Nico.ta6_C 1500 ---------------------------------CGUGCAGUGCU-GUAGC Nico.ta6_C 1550 (UAAC)GCGU-UAAGUAUCC|C|GCCUGGGGAGUACGUUC(GCAA)GAAU Nico.ta6_C 1600 GAAACUCAAAGGAAUUGACGGGGGCCC-GCACA-------AGCGGU-GGA Nico.ta6_C 1650 GCAUGUGGUUUAAUUCG-(AUGCAAAG)CGAAGAACCUUACCAGGGCUUG Nico.ta6_C 1700 ACA----UG|-CC-GCG--AA------UCCUCUU-----(GAA-A-)GAG Nico.ta6_C 1750 AG-GGG---UG--CC---------(UUCG------)---------GGAA- Nico.ta6_C 1800 ---------------|CGCGGACA|C|AGGUGGUGCAUG|GCU-GUCGUC Nico.ta6_C 1850 A|-G-CUCGU|GCC(GUAA)GGUGUUGGG(UUAAGU)CCCGCAACGAGCG Nico.ta6_C 1900 CAACCCUCG|UGUUUA-G-UUGCC-AUCG--------------------- Nico.ta6_C 1950 -------------------------------------------------- Nico.ta6_C 2000 -------------------------------------------------- Nico.ta6_C 2050 -----------------------------(--UUGAG---)------UUU Nico.ta6_C 2100 |GGAACCCUGAACAGACUGCCGGU(GAUAA----)--------------- Nico.ta6_C 2150 ---------GCCGGAGGAAGGUGAGGAUGACGUC-AA--GUCAUCAUGCC Nico.ta6_C 2200 CCUUAUGCCCUGGGCGAC-ACACGUGCUACAAUGGC--CGGGACAAAGGG Nico.ta6_C 2250 UC----GCGAUCCC--------------------(----GCGA-)----- Nico.ta6_C 2300 --------------G-GU-GAGCUAACC-CCAA-AAACCCGUCCUCAGUU Nico.ta6_C 2350 CGGAUUGCAGGC(--UGCAACUC)GCCUGCAUGAAGCCGGAAUCGCU--- Nico.ta6_C 2400 ---AGUAAU-CGCCGG(UC--AGCCAU)ACGGCGGUGAAUU..-....-- Nico.ta6_C 2450 -----------------................................. Nico.ta6_C 2500 ...........................---...........(........ Nico.ta6_C 2550 .....--)...-...............-....-................. Nico.ta6_C 2600 ...........................(....)................. Nico.ta6_C 2650 .......-|....................................~~~~~ Nico.ta6_C 2700 ~~~~~~~~~~~~~~~~| Nico.ta7_C 0 ...........UCUCAUGGAGAG-UU(C-GA)UCCU|GGCUCAGGAUGAA Nico.ta7_C 50 CGC-UGGCGGCAUGCUU--AACACAUGCAAGUCGGACG-GG--------- Nico.ta7_C 100 --------AAG(UGG-----------------UG------)UUU------ Nico.ta7_C 150 -----|----------CC--AGU--GGCGGACGGGUGAGUAA-CGCGUAA Nico.ta7_C 200 GA-ACCUGC-CCUU------------------------------------ Nico.ta7_C 250 -------------------------------------------------G Nico.ta7_C 300 GGA---------GGGGAACAACAG------------------------CU Nico.ta7_C 350 G(GAAA)CGG-CUGCUAAUACC-CCGU-AG-------------------- Nico.ta7_C 400 ------------------GCU-------(GAGG---)-------AGC--- Nico.ta7_C 450 ---AAAA-----------------------GGA-------------(--- Nico.ta7_C 500 -------GGAA------)---------|----UCCGCCCGAGGA-GGG|G Nico.ta7_C 550 -CUCGCGU|-CUGAUUA-GCUAGUUGG-UG-AG(G-CAAUAG)-CUUACC Nico.ta7_C 600 AA|GGCGAUGAU-CAGUAGCUG|GUCC(GAGA)GGAUGAUCAGC|CACAC Nico.ta7_C 650 UGGGA(CUGAGACACG)GCCCAGA-C--UCC(UA-CG)GG-A--GGCAG- Nico.ta7_C 700 CAGUGGGG-AAUUUUCCG-CAAU-GGGC-(-GAAA)-GC-U-GACGGA|G Nico.ta7_C 750 CAAUGCCGCGUGGAGGUAGAAGGCC(---CACG--)GG-UC--GUGAACU Nico.ta7_C 800 UC|UUUU-CCCGGAGAAGAA----------(--GCAA--)---------- Nico.ta7_C 850 UGACG-GU-AUCU-GGGGAA-UAAGCAUC-GGCU-AACU-CUGUG(CCA- Nico.ta7_C 900 -GCAGCC-GCGGU---AA-)UACAGAG|GAUGCAAGCGUUAU-CCGGAAU Nico.ta7_C 950 GAUUGGGC|GUAAAGCGUCUGUAGGUG|GCUUUUUAAG-|UCC-GCCGUC Nico.ta7_C 1000 AAAUCCCAGGGC(------------------------------------- Nico.ta7_C 1050 ---------------------------------UCA)ACCCUGG-AC-AG Nico.ta7_C 1100 GCGGU--GGA-AAC-U-ACC-AA-G-CUGGAG-UA-CGGUA-----GGGG Nico.ta7_C 1150 CAGAG|GGAAUUUCCGG-UGGAGCG(GUGAAA)UGCGUAGAGA---UCGG Nico.ta7_C 1200 AAAGAACACCAAC---GGC(GAAA)GC-A-CUCUG-CUG-GGCCG--A-- Nico.ta7_C 1250 -------------------------------------------------- Nico.ta7_C 1300 ----------CACUGACACU-GAG-AGACGAAAGCUAGGGGAGCGAAUGG Nico.ta7_C 1350 G(AUU-A-GAUAC)-CCCAGUAG--UC-CUA-GCCGUAAACGAUGGAU-- Nico.ta7_C 1400 --AC-UA|GGCG-CUGUGCG------U-----------(--------AUC Nico.ta7_C 1450 GA---)CC------------------------------------------ Nico.ta7_C 1500 ---------------------------------CGUGCAGUGCU-GUAGC Nico.ta7_C 1550 (UAAC)GCGU-UAAGUAUCC|C|GCCUGGGGAGUACGUUC(GCAA)GAAU Nico.ta7_C 1600 GAAACUCAAAGGAAUUGACGGGGGCCC-GCACA-------AGCGGU-GGA Nico.ta7_C 1650 GCAUGUGGUUUAAUUCG-(AUGCAAAG)CGAAGAACCUUACCAGGGCUUG Nico.ta7_C 1700 ACA----UG|-CC-GCG--AA------UCCUCUU-----(GAA-A-)GAG Nico.ta7_C 1750 AG-GGG---UG--CC---------(UUCG------)---------GGAA- Nico.ta7_C 1800 ---------------|CGCGGACA|C|AGGUGGUGCAUG|GCU-GUCGUC Nico.ta7_C 1850 A|-G-CUCGU|GCC(GUAA)GGUGUUGGG(UUAAGU)CCCGCAACGAGCG Nico.ta7_C 1900 CAACCCUCG|UGUUUA-G-UUGCC-AUCG--------------------- Nico.ta7_C 1950 -------------------------------------------------- Nico.ta7_C 2000 -------------------------------------------------- Nico.ta7_C 2050 -----------------------------(--UUGAG---)------UUU Nico.ta7_C 2100 |GGAACCCUGAACAGACUGCCGGU(GAUAA----)--------------- Nico.ta7_C 2150 ---------GCCGGAGGAAGGUGAGGAUGACGUC-AA--GUCAUCAUGCC Nico.ta7_C 2200 CCUUAUGCCCUGGGCGAC-ACACGUGCUACAAUGGC--CGGGACAAAGGG Nico.ta7_C 2250 UC----GCGAUCCC--------------------(----GCGA-)----- Nico.ta7_C 2300 --------------G-GU-GAGCUAACC-CCAA-AAACCCGUCCUCAGUU Nico.ta7_C 2350 CGGAUUGCAGGC(--UGCAACUC)GCCUGCAUGAAGCCGGAAUCGCU--- Nico.ta7_C 2400 ---AGUAAU-CGCCGG(UC--AGCCAU)ACGGCGGUGAAUU..-....-- Nico.ta7_C 2450 -----------------................................. Nico.ta7_C 2500 ...........................---...........(........ Nico.ta7_C 2550 .....--)...-...............-....-................. Nico.ta7_C 2600 ...........................(....)................. Nico.ta7_C 2650 .......-|....................................~~~~~ Nico.ta7_C 2700 ~~~~~~~~~~~~~~~~| Nico.ta8_C 0 ...........UCUCAUGGAGAG-UU(C-GA)UCCU|GGCUCAGGAUGAA Nico.ta8_C 50 CGC-UGGCGGCAUGCUU--AACACAUGCAAGUCGGACG-GG--------- Nico.ta8_C 100 --------AAG(UGG-----------------UG------)UUU------ Nico.ta8_C 150 -----|----------CC--AGU--GGCGGACGGGUGAGUAA-CGCGUAA Nico.ta8_C 200 GA-ACCUGC-CCUU------------------------------------ Nico.ta8_C 250 -------------------------------------------------G Nico.ta8_C 300 GGA---------GGGGAACAACAG------------------------CU Nico.ta8_C 350 G(GAAA)CGG-CUGCUAAUACC-CCGU-AG-------------------- Nico.ta8_C 400 ------------------GCU-------(GAGG---)-------AGC--- Nico.ta8_C 450 ---AAAA-----------------------GGA-------------(--- Nico.ta8_C 500 -------GGAA------)---------|----UCCGCCCGAGGA-GGG|G Nico.ta8_C 550 -CUCGCGU|-CUGAUUA-GCUAGUUGG-UG-AG(G-CAAUAG)-CUUACC Nico.ta8_C 600 AA|GGCGAUGAU-CAGUAGCUG|GUCC(GAGA)GGAUGAUCAGC|CACAC Nico.ta8_C 650 UGGGA(CUGAGACACG)GCCCAGA-C--UCC(UA-CG)GG-A--GGCAG- Nico.ta8_C 700 CAGUGGGG-AAUUUUCCG-CAAU-GGGC-(-GAAA)-GC-U-GACGGA|G Nico.ta8_C 750 CAAUGCCGCGUGGAGGUAGAAGGCC(---CACG--)GG-UC--GUGAACU Nico.ta8_C 800 UC|UUUU-CCCGGAGAAGAA----------(--GCAA--)---------- Nico.ta8_C 850 UGACG-GU-AUCU-GGGGAA-UAAGCAUC-GGCU-AACU-CUGUG(CCA- Nico.ta8_C 900 -GCAGCC-GCGGU---AA-)UACAGAG|GAUGCAAGCGUUAU-CCGGAAU Nico.ta8_C 950 GAUUGGGC|GUAAAGCGUCUGUAGGUG|GCUUUUUAAG-|UCC-GCCGUC Nico.ta8_C 1000 AAAUCCCAGGGC(------------------------------------- Nico.ta8_C 1050 ---------------------------------UCA)ACCCUGG-AC-AG Nico.ta8_C 1100 GCGGU--GGA-AAC-U-ACC-AA-G-CUGGAG-UA-CGGUA-----GGGG Nico.ta8_C 1150 CAGAG|GGAAUUUCCGG-UGGAGCG(GUGAAA)UGCGUAGAGA---UCGG Nico.ta8_C 1200 AAAGAACACCAAC---GGC(GAAA)GC-A-CUCUG-CUG-GGCCG--A-- Nico.ta8_C 1250 -------------------------------------------------- Nico.ta8_C 1300 ----------CACUGACACU-GAG-AGACGAAAGCUAGGGGAGCGAAUGG Nico.ta8_C 1350 G(AUU-A-GAUAC)-CCCAGUAG--UC-CUA-GCCGUAAACGAUGGAU-- Nico.ta8_C 1400 --AC-UA|GGCG-CUGUGCG------U-----------(--------AUC Nico.ta8_C 1450 GA---)CC------------------------------------------ Nico.ta8_C 1500 ---------------------------------CGUGCAGUGCU-GUAGC Nico.ta8_C 1550 (UAAC)GCGU-UAAGUAUCC|C|GCCUGGGGAGUACGUUC(GCAA)GAAU Nico.ta8_C 1600 GAAACUCAAAGGAAUUGACGGGGGCCC-GCACA-------AGCGGU-GGA Nico.ta8_C 1650 GCAUGUGGUUUAAUUCG-(AUGCAAAG)CGAAGAACCUUACCAGGGCUUG Nico.ta8_C 1700 ACA----UG|-CC-GCG--AA------UCCUCUU-----(GAA-A-)GAG Nico.ta8_C 1750 AG-GGG---UG--CC---------(UUCG------)---------GGAA- Nico.ta8_C 1800 ---------------|CGCGGACA|C|AGGUGGUGCAUG|GCU-GUCGUC Nico.ta8_C 1850 A|-G-CUCGU|GCC(GUAA)GGUGUUGGG(UUAAGU)CCCGCAACGAGCG Nico.ta8_C 1900 CAACCCUCG|UGUUUA-G-UUGCC-AUCG--------------------- Nico.ta8_C 1950 -------------------------------------------------- Nico.ta8_C 2000 -------------------------------------------------- Nico.ta8_C 2050 -----------------------------(--UUGAG---)------UUU Nico.ta8_C 2100 |GGAACCCUGAACAGACUGCCGGU(GAUAA----)--------------- Nico.ta8_C 2150 ---------GCCGGAGGAAGGUGAGGAUGACGUC-AA--GUCAUCAUGCC Nico.ta8_C 2200 CCUUAUGCCCUGGGCGAC-ACACGUGCUACAAUGGC--CGGGACAAAGGG Nico.ta8_C 2250 UC----GCGAUCCC--------------------(----GCGA-)----- Nico.ta8_C 2300 --------------G-GU-GAGCUAACC-CCAA-AAACCCGUCCUCAGUU Nico.ta8_C 2350 CGGAUUGCAGGC(--UGCAACUC)GCCUGCAUGAAGCCGGAAUCGCU--- Nico.ta8_C 2400 ---AGUAAU-CGCCGG(UC--AGCCAU)ACGGCGGUGAAUU..-....-- Nico.ta8_C 2450 -----------------................................. Nico.ta8_C 2500 ...........................---...........(........ Nico.ta8_C 2550 .....--)...-...............-....-................. Nico.ta8_C 2600 ...........................(....)................. Nico.ta8_C 2650 .......-|....................................~~~~~ Nico.ta8_C 2700 ~~~~~~~~~~~~~~~~| Bras.nap_C 0 ~~~~~~~~~~~UCUCAUGGAGAG-UU(C-GA)UCCU|GGCUCAGGAUGAA Bras.nap_C 50 CGC-UGGCGGCAUGCUU--AACACAUGCAAGUCGGACG-GG--------- Bras.nap_C 100 --------AAG(UGG-----------------UG------)UUU------ Bras.nap_C 150 -----|----------CC--ACU--GGCGGACGGGUGAGUAA-CGCGUAA Bras.nap_C 200 GA-ACCUGC-CCUU------------------------------------ Bras.nap_C 250 -------------------------------------------------G Bras.nap_C 300 GGA---------GGGGAACAACAG------------------------CU Bras.nap_C 350 G(GAAA)CGG-CUGCUAAUACC-CCGU-AG-------------------- Bras.nap_C 400 ------------------GCU-------(GAGG---)-------AGC--- Bras.nap_C 450 ---AAAA-----------------------GGA-------------(--- Bras.nap_C 500 -------GGAA------)---------|----UCCGCCCGAGGA-GGG|G Bras.nap_C 550 -CUCGCGU|-CGGAUUA-GCUAGUUGG-UG-AG(G-CAAUAG)-CUUACC Bras.nap_C 600 AA|GGCGAUGAU-CAGUAGCUG|GUCC(GAGA)GGAUGAUCAGC|CACAC Bras.nap_C 650 UGGGA(CUGAGACACG)GCCCAGA-C--UCC(UA-CG)GG-A--GGCAG- Bras.nap_C 700 CAGUGGGG-AAUUUUCCG-CAAU-GGGC-(-GAAA)-GCCU-GACGGA|G Bras.nap_C 750 CAAUGCCGCGUGGAGGUAGAAGGCC(---UACG--)GG-UC--CUGAACU Bras.nap_C 800 UC|UUUU-CCCAGAGAAGAA----------(--GCAA--)---------- Bras.nap_C 850 UGACG-GU-AUCU-GGGGAA-UAAGCAUC-GGCU-AACU-CUGUG(CCA- Bras.nap_C 900 -GCAGCC-GCGGU---AA-)UACAGAG|GAUGCAAGCGUUAU-CCGGA-U Bras.nap_C 950 GAUUGGGC|GUAAAGCGUCUGUAGGUG|GCUUUUUAAG-|UCC-GCCGUC Bras.nap_C 1000 AAAUCCCAGGGC(------------------------------------- Bras.nap_C 1050 ---------------------------------UCA)ACCCUGG-AC-AG Bras.nap_C 1100 GCGGU--GGA-AAC-U-ACC-AA-G-CUUGAG-UA-CGGUA-----GGGG Bras.nap_C 1150 CAGAG|GGAAUUUCCGG-UGGAGCG(GUGAAA)UGCGUAGAGA---UCGG Bras.nap_C 1200 AAAGAACACCAAC---GGC(GAAA)GC-A-CUCUG-CUG-GGCCG--A-- Bras.nap_C 1250 -------------------------------------------------- Bras.nap_C 1300 ----------CACUGACACU-GAG-AGACGAAAGCUAGGGGAGCGAAUGG Bras.nap_C 1350 G(AUU-A-GAUAC)-CCCAGUAG--UC-CUA-GCCGUAAACGAUGGAU-- Bras.nap_C 1400 --AC-UA|GGCG-CUGUGCG------U-----------(--------AUC Bras.nap_C 1450 GA---)CC------------------------------------------ Bras.nap_C 1500 ---------------------------------CGUGCAGUGCU-GUAGC Bras.nap_C 1550 (UAAC)GCGU-UAAGUAUCC|C|GCCUGGGGAGUACGUUC(GCAA)GAAU Bras.nap_C 1600 GAAACUCAAAGGAAUUGACGGGGGCCC-GCACA-------AGCGGU-GGA Bras.nap_C 1650 GCAUGUGGUUUAAUUCG-(AUGCAAAG)CGAAGAACCUUACCAGGGCUUG Bras.nap_C 1700 ACA----UG|-CC-GCG--AA------UCCUCUU-----(GAA-A-)GAG Bras.nap_C 1750 AG-GGG---UG--CC---------(UUCG------)---------GGAA- Bras.nap_C 1800 ---------------|CGCGGACA|C|AGGUGGUGCAUG|GCU-GUCGUC Bras.nap_C 1850 A|-G-CUCGU|GCC(GUAA)GGUGUUGGG(UUAAGU)CCCGCAACGAGCG Bras.nap_C 1900 CAACCCUCG|UGUUUA-G-UUGCC-ACCG--------------------- Bras.nap_C 1950 -------------------------------------------------- Bras.nap_C 2000 -------------------------------------------------- Bras.nap_C 2050 -----------------------------(--UUGAG---)------UUU Bras.nap_C 2100 |GGAACCCUGAACAGACUGCCGGU(GAUAA----)--------------- Bras.nap_C 2150 ---------GCCGGAGGAAGGUGAGGAUGACGUC-AA--GUCAUCAUGCC Bras.nap_C 2200 CCUUAUGCCCUGGGCGAC-ACACGUGCUACAAUGGG--CGGGACAAAGGG Bras.nap_C 2250 UC----GCGAUCCC--------------------(----GCGA-)----- Bras.nap_C 2300 --------------GGGU-GAGCUAACU-CCAA-AAACCCGUCCUCAGUU Bras.nap_C 2350 CGGAUUGCAGGC(--UGCAACUC)GCCUGCAUGAAGCCGGAAUCGCU--- Bras.nap_C 2400 ---AGUAAU-CGCCGG(UC--AGCCAU)ACGGCGGUGAAUUC--GUU--- Bras.nap_C 2450 -----------------CCCGGGCCUUGUACACACCGCCCGUCACACUAU Bras.nap_C 2500 GGGAGCUGG-CCAUGCCCGAAGUCGUU---ACCUU-AACC-(-----GCA Bras.nap_C 2550 A------)-GG-AGG-GGG-GU-GCCG-AAGG-CAGGGCUAGUGACUGGA Bras.nap_C 2600 GUGAAGUCGUAACAAGGUAGCCGUACU(GGAA)GGUGCGGCUGGAUCACC Bras.nap_C 2650 UCCUUU~-|~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ Bras.nap_C 2700 ~~~~~~~~~~~~~~~~| Adri.gla_C 0 .......................-..(....)....|............. Adri.gla_C 50 CGCUGGMCGGCAUGCUU--AACACAUGCAAGUCGGACG-GG--------- Adri.gla_C 100 --------AAG(UGG-----------------UG------)UUU------ Adri.gla_C 150 -----|----------CC--AGU--GGCGGACGGGUGAGUAA-CGCGUAA Adri.gla_C 200 GA-ACCUGC-CCUU------------------------------------ Adri.gla_C 250 -------------------------------------------------G Adri.gla_C 300 GGA---------GGGGAACAACAG------------------------CU Adri.gla_C 350 G(GAAA)CGG-CUGCUAAUACC-CCGU-AG-------------------- Adri.gla_C 400 ------------------GCU-------(GAGG---)-------AGC--- Adri.gla_C 450 ---MNAA-----------------------GGA-------------(--- Adri.gla_C 500 -------GGAA------)---------|----UCCNCCCGAGGA-GGG|G Adri.gla_C 550 -CUCGCGU|-CUGAUUA-GCUAGUUGG-UG-AG(G-CAAUAG)-CUUACC Adri.gla_C 600 AA|GGUGAUGAU-CAGUAGCUG|GUCC(GAGA)GGAUGAUCAGC|CACAC Adri.gla_C 650 UGGGA(CUGAGACACG)GCCCAGA-C--UCC(UA-CG)GG-A--GGCAG- Adri.gla_C 700 CAGUGGGG-AAUUUUCCG-CAAU-GGGC-(-GAAA)-GCCU-GACGGA|G Adri.gla_C 750 CAAUGCCGCGUGGAGGUAGAAGGCC(---UACG--)GG-UC--GUGAACU Adri.gla_C 800 UC|UUUU-CCCGGAGAAGAA----------(--GCAA--)---------- Adri.gla_C 850 UGACG-GU-AUCU-GGGGAA-UAAGCAUC-GGCU-AACU-CUGUG(CCA- Adri.gla_C 900 -GCAGCC-GCGGU---AA-)UACAGAG|GAUNCAAGCGUWAU-CCGGAAU Adri.gla_C 950 GAUUGGGC|GUAAAGCGUCUGUAGGUG|GCUUUUUAAG-|UCC-GCCGUC Adri.gla_C 1000 AAAUCCCAGGGC(------------------------------------- Adri.gla_C 1050 ---------------------------------UCA)ACCCUGG-AC-AG Adri.gla_C 1100 GCGGU--GGA-AAC-U-GCC-AA-G-CUGGAG-UA-CGGUA-----GGGG Adri.gla_C 1150 CAGAG|GGAAUUUCCGG-UGGAGCG(GUGAAA)UGCGUAGAGA---UCGG Adri.gla_C 1200 AAAGAACACCAAC---GGC(GAAA)GC-A-CUCUG-CUG-GGCCG--A-- Adri.gla_C 1250 -------------------------------------------------- Adri.gla_C 1300 ----------CACUGACACU-GAG-AGACGAAAGCUAGGGGAGCGAAUGG Adri.gla_C 1350 G(AUU-AAGAUAC)CCCCAGUAG--UCCUAN-GCCGUAAACGAUGGAU-- Adri.gla_C 1400 --AC-UG|GGCG-CUGUGCG------U-----------(--------AUC Adri.gla_C 1450 GA---)CC------------------------------------------ Adri.gla_C 1500 ---------------------------------CGUGCAGUGCU-GUAGC Adri.gla_C 1550 (UAAC)GCGU-UAAGUAUCC|C|NCCUGGGGAGUACGUUC(GCAA)GAAU Adri.gla_C 1600 GAAACUCAAAGGAAUUGNCGGGGGCCC-GCACA-------AGCGGU-GGA Adri.gla_C 1650 GCAUGUGGUUUAAUUCGA(UNCAAAAG)CGAAGAACCUUACCAGGGCUUG Adri.gla_C 1700 ACA----UV|-CC-GCG--AA------UCCUCUU-----(GAA-A-)GAG Adri.gla_C 1750 AG-GGG---UG--CC---------(UUCG------)---------GGAA- Adri.gla_C 1800 ---------------|CGCGGACA|C|AGGUGGUGCAUG|NCU-GUCGUC Adri.gla_C 1850 A|-G-CUCGU|GCC(GUAA)GGUGUUGGG(UUAAGU)CCCGCAACGAGCG Adri.gla_C 1900 CAACCCUCG|UGUUUA-G-UUGCC-ACUG--------------------- Adri.gla_C 1950 -------------------------------------------------- Adri.gla_C 2000 -------------------------------------------------- Adri.gla_C 2050 -----------------------------(--UUGAG---)------UUU Adri.gla_C 2100 |GGAACCCUGAGCAGACUGCCGGU(GAUAA----)--------------- Adri.gla_C 2150 ---------GCCGGAGGAAGGUGAGGAUGACGUC-AA--GUCAUCAUGCC Adri.gla_C 2200 CCUUAUGCCCUGGGCGAC-ACACGUGCUACAAUGGC--CGGGACAAAGGG Adri.gla_C 2250 UC----GCGAUCCC--------------------(----GCGA-)----- Adri.gla_C 2300 --------------GGGU-GAGCUAACU-CCAA-AAACCCGUCCUCAGUU Adri.gla_C 2350 CGGAUUGCAGGC(--UGCAACUC)GCCUGCAUGAAGUCGGAAUCGCU--- Adri.gla_C 2400 ---AGUAAU-CGCCGG(UC--AGCCAU)ACGGCGGUGAAUUC--GUU--- Adri.gla_C 2450 -----------------CCCGGGCCUUGUACACACCGCCCGUCACACUAU Adri.gla_C 2500 GGSMGCUGGNCCAUGCCCGAAGUCGUU---ACCUU-AACC-(-----GCA Adri.gla_C 2550 A------)-GG-AGG-GGG-AU-GCCG-AAGG-CAGGGCUAGUGACUGGA Adri.gla_C 2600 GUGAAGUCGUAACAAGGUA........(....)................. Adri.gla_C 2650 .......-|....................................~~~~~ Adri.gla_C 2700 ~~~~~~~~~~~~~~~~| Ephr.pul_C 0 .......................-..(....)....|..CUCAGGAUGAA Ephr.pul_C 50 CGC-UGGCGGCAUGCUU--AACACAUGCAAGUCGGACG-GG--------- Ephr.pul_C 100 --------AAG(UGG-----------------UG------)UUU------ Ephr.pul_C 150 -----|----------CC--AGU--GGCGGACGGGUGAGUAA-CGCGUAA Ephr.pul_C 200 GA-ACCU-C-CCUU------------------------------------ Ephr.pul_C 250 -------------------------------------------------G Ephr.pul_C 300 GGA---------GGGGAACAACAG------------------------CU Ephr.pul_C 350 G(GAAA)CGG-NUGCUAAUACC-CCGU-AG-------------------- Ephr.pul_C 400 ------------------GCU-------(GAGG---)-------AGC--- Ephr.pul_C 450 ---AAAA-----------------------GGA-------------(--- Ephr.pul_C 500 -------GGAA------)---------|----UCCGCCCGAGGA-GGG|G Ephr.pul_C 550 -CUCGCGU|-CUGAUUA-GCUAGUUGG-UG-AG(N-CAAUAG)-CUUACC Ephr.pul_C 600 AA|GGCGAUGAU-CAGUAGCUG|GUCC(GAGA)GGAUGAUCAGC|CACAC Ephr.pul_C 650 UGGGA(CUGAGACACG)GCCCAGA-C--UCC(UA-CG)GG-A--GGCAG- Ephr.pul_C 700 CAGUGGGG-AAUUUUCCG-CAAU-GGGC-(-GAAA)-GCCU-GACGGA|G Ephr.pul_C 750 CAAUGCCGCGUGGAGGUAGAAGGCC(---UACG--)GG-UC--GUGAACU Ephr.pul_C 800 UC|UUUU-CCCGGAGAAGAA----------(--GCAA--)---------- Ephr.pul_C 850 UGACG-GU-AUCU-GGGGAA-UAAGCAUC-GNNU-ANCU-CUGUG(CCA- Ephr.pul_C 900 -GCAGNC-GCGGU---AA-)UACAGAG|GAUGCAAGCGUUAU-CCGGAAU Ephr.pul_C 950 GAUUGGGC|GUAAAGCGUCUGUAGGUG|GNUUUUUAAG-|UCC-GCCGUC Ephr.pul_C 1000 AAAUCCCAGGGC(------------------------------------- Ephr.pul_C 1050 ---------------------------------UCA)ACCCUGG-AC-AG Ephr.pul_C 1100 GNGGU--GGA-AAC-U-GCC-AA-G-CUCGAG-UA-CGGUA-----GGGG Ephr.pul_C 1150 CAGAG|GGAAUUUCCGG-UGGAGCG(GUGAAA)UGCGUAGAGA---UCGG Ephr.pul_C 1200 AAAGAACACCAAC---GGC(GAAA)GC-A-CUCUG-CUG-GGCCG--A-- Ephr.pul_C 1250 -------------------------------------------------- Ephr.pul_C 1300 ----------CACUGACACU-GAG-AGACGAAAGCUAGGGGAGCGAAUGG Ephr.pul_C 1350 G(AUU-A-GAUAC)-CCCAGUAG--UC-CUA-GCCGUAAACGAUGGAU-- Ephr.pul_C 1400 --AC-UG|GGCG-CUGUGCG------U-----------(--------AUU Ephr.pul_C 1450 GA---)CC------------------------------------------ Ephr.pul_C 1500 ---------------------------------CGUGCAGUGCU-GUAGC Ephr.pul_C 1550 (UAAC)GCGU-UAAGUAUCC|C|CCCUGGGGAGUACGUUC(GCAA)GAAU Ephr.pul_C 1600 GAAACUCAAAGGAAUUG-CGGGGGCCC--CACA-------AGCGGU-GGA Ephr.pul_C 1650 GCAUGUGGUUUAAUUCG-(AUNCAAAG)CGAAGAACCUUACCAGGGCUUG Ephr.pul_C 1700 ACA----UG|-CC-GCG--AA------UCCUCUU-----(GAA-A-)GAG Ephr.pul_C 1750 AG-GGG---UG--CC---------(UUCG------)---------GGAA- Ephr.pul_C 1800 ---------------|CGCGGACA|C|AGGUGGUGCAUG|KCU-GUCGUC Ephr.pul_C 1850 A|-G-CUCGU|NCC(GUAA)GGUGUUGGG(UUAAGU)CCCGCAACGAGCG Ephr.pul_C 1900 CAACCCUCG|UGUUUA-G-UUGCC-ACUG--------------------- Ephr.pul_C 1950 -------------------------------------------------- Ephr.pul_C 2000 -------------------------------------------------- Ephr.pul_C 2050 -----------------------------(--UUGAG---)------UUU Ephr.pul_C 2100 |GGAACCCUGAGCAGACUGCCGGU(GAUAA----)--------------- Ephr.pul_C 2150 ---------RCCGGAGGAAGGUGAGGAUGACGUC-AA--GUCAUCAUGCC Ephr.pul_C 2200 CCUUAUGCCCUGGGCGAC-ACACGUGCUACAAUGGC--CGGGACAAAGGG Ephr.pul_C 2250 UC----GCGAUCCC--------------------(----GCGA-)----- Ephr.pul_C 2300 --------------GGGU-GARCUAACU-CCMN-AAACCCGUCCUCAGUU Ephr.pul_C 2350 CGGAUUUCAGGC(--UGCAACUC)SCCUGCAUGAAGCCGGAAUCGCU--- Ephr.pul_C 2400 ---AGUAAU-CGCCGG(UC--AGCCAU)ACGGNGGUGAAUUC--GUU--- Ephr.pul_C 2450 -----------------CCCGGGGCUUGUACACACCGCCCGUCACACUAU Ephr.pul_C 2500 GGGAGCUGG-CCAUGCCCGAAGUCGNU---ACCUU-AACC-(-----GCA Ephr.pul_C 2550 A------)-GG-AGG-GGG-AU-GCCG-AAGG-CAGGGCUAGUGACUGGA Ephr.pul_C 2600 GUGAAGUCG..................(....)................. Ephr.pul_C 2650 .......-|....................................~~~~~ Ephr.pul_C 2700 ~~~~~~~~~~~~~~~~| Rici.com_C 0 .......................-..(....)....|..CUCAGGAUGAA Rici.com_C 50 CGC-UGGCGGCAUGCUU--AACACAUACAAGUCGGACG-GG--------- Rici.com_C 100 --------AAG(UGG-----------------UG------)UUU------ Rici.com_C 150 -----|----------CC--AGU--GGCGGACGGGUGAGUAA-CGCGUAA Rici.com_C 200 GA-ACCUGC-CCUU------------------------------------ Rici.com_C 250 -------------------------------------------------G Rici.com_C 300 GGA---------GGGGAACAACAG------------------------CU Rici.com_C 350 G(GAAA)CGG-CUGCUAAUACC-CCGU-AG-------------------- Rici.com_C 400 ------------------GCU-------(GAGG---)-------AGC--- Rici.com_C 450 ---AAAA-----------------------GGA-------------(--- Rici.com_C 500 -------GGAA------)---------|----UCCGCCCGAGGA-GGG|G Rici.com_C 550 -CUCGCGU|-CUGAUUA-GCUAGUUGG-UG-AG(G-CAAUAG)-CUUACC Rici.com_C 600 AA|GGCGAUGAU-CAGUAGCUG|GUCC(GAGA)GGAUGAUCAGC|CACAC Rici.com_C 650 UGGGA(CUGAGACACG)GCCCAGA-C--UCC(UA-CG)GG-A--GGCAG- Rici.com_C 700 CAGUGGGG-AAUUUUCCG-CAAU-GGGC-(-GAAA)-GCCU-GACGGA|G Rici.com_C 750 CAAUGCCGCGUGGAGGUAGAAGGCC(---UACG--)GG-UC--GUGAACU Rici.com_C 800 UC|UUUU-CCCGGAGAAGAA----------(--GCAA--)---------- Rici.com_C 850 UGACG-GU-AUCU-GGGGAA-UAAGCAUC-GGCU-AACU-CUGUG(CCA- Rici.com_C 900 -GCAGCC-GCGGU---AA-)UACAGAG|GAUGCAAGCGUUAU-CCGGAAU Rici.com_C 950 GAUUGGGC|GUAAAGCGUCUGUAGGUG|GCUUUUUAAG-|UCC-GCCGUC Rici.com_C 1000 AAAUCCCAGGGC(------------------------------------- Rici.com_C 1050 ---------------------------------UCA)ACCCUGG-AC-AG Rici.com_C 1100 GCGGU--GGA-AAC-U-GCC-AA-G-CUGGAG-UA-CGGUA-----GGGG Rici.com_C 1150 CAGAG|GGAAUUUCCGG-UGGAGCG(GUGAAA)UGCGUAGAGA---UCGG Rici.com_C 1200 AAAGAACACCAAC---GGC(GAAA)GC-A-CUCUG-CUG-GGCCG--A-- Rici.com_C 1250 -------------------------------------------------- Rici.com_C 1300 ----------CACUGACACU-GAG-AGACGAAAGCUAGGGGAGCGAAUGG Rici.com_C 1350 G(AUU-A-GAUAC)-CCCAGUAG--UC-CUA-GCCGUAAACGAUGGAU-- Rici.com_C 1400 --AC-UG|GGCG-CUGUGCG------U-----------(--------AUC Rici.com_C 1450 GA---)CC------------------------------------------ Rici.com_C 1500 ---------------------------------CGUGCAGUGCU-GUAGC Rici.com_C 1550 (UAAC)GCGU-UAAGUAUCC|C|GCCUGGGGAGUACGUUC(GCAA)GAAU Rici.com_C 1600 GAAACUCAAAGGAAUUGACGGGGGCCC-GCACA-------AGCGGU-GGA Rici.com_C 1650 GCAUGUGGUUUAAUUCG-(AUGCAAAG)CGAAGAACCUUACCAGGGCUUG Rici.com_C 1700 ACA----UG|-CC-GCG--AA------UCCUCUU-----(GAA-A-)GAG Rici.com_C 1750 AG-GGG---UG--CC---------(UUCG------)---------GGAA- Rici.com_C 1800 ---------------|CGCGGACA|C|AGGUGGUGCAUG|GCU-GUCGUC Rici.com_C 1850 A|-G-CUCGU|GCC(GUAA)GGUGUUGGG(UUAAGU)CCCGCAACGAGCG Rici.com_C 1900 CAACCCUCG|UGUUUA-G-UUGCC-ACUG--------------------- Rici.com_C 1950 -------------------------------------------------- Rici.com_C 2000 -------------------------------------------------- Rici.com_C 2050 -----------------------------(--UUGAG---)------UUU Rici.com_C 2100 |GGAACCCUGAGCAGACUGCCGGU(GAUAA----)--------------- Rici.com_C 2150 ---------GCCGGAGGAAGGUGAGGAUGACGUC-AA--GUCAUCAUGCC Rici.com_C 2200 CCUUAUGCCCUGGGCGAC-ACACGUGCUACAAUGGC--CGGGACAAAGGG Rici.com_C 2250 UC----GCGAUCCC--------------------(----GCGA-)----- Rici.com_C 2300 --------------GGGU-GAGCUAACU-CCAA-AAACCCGUCCUCAGUU Rici.com_C 2350 CGGAUUGCAGGC(--UGCAACUC)GCCUGCAUGAAGCCGGAAUCGCU--- Rici.com_C 2400 ---AGUAAU-CGCCGG(UC--AGCCAU)ACGGCGGUGAAUUC--GUU--- Rici.com_C 2450 -----------------CCCGGGCCUUGUACACACCGCCCGUCACACUAU Rici.com_C 2500 GGGAGCUGG-CCAUGCCCGAAGUCGUU---ACCUU-AACC-(-----GCA Rici.com_C 2550 A------)-GG-AGG-GGG-AU-GCCG-AAGG-CAGGGCUAGUGACUGGA Rici.com_C 2600 GUG-AGUCGU.................(....)................. Rici.com_C 2650 .......-|....................................~~~~~ Rici.com_C 2700 ~~~~~~~~~~~~~~~~| 2.11.2.3 0 x~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~ 2.11.2.3 50 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 2.11.2.3 100 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~ 2.11.2.3 150 ~~~~~~---------~~~~~~~~--~~~~~~~~~~~~~~~~~-~~~~~~~ 2.11.2.3 200 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 2.11.2.3 250 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~ 2.11.2.3 300 ~~~---------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 2.11.2.3 350 ~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~-------------------- 2.11.2.3 400 -------~~~~~~~~~~~~~~~------~~~~~~~-~~------~~~~~~ 2.11.2.3 450 ~~~~~~~~~~~~------------------~~~~~~~~~~~~~~~~~~~~ 2.11.2.3 500 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~ 2.11.2.3 550 -~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~ 2.11.2.3 600 ~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 2.11.2.3 650 ~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~-~~~~~-~--~~~~~~ 2.11.2.3 700 ~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~-~~~~~~~~~~-~~~~~~~~ 2.11.2.3 750 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~--~~~~~~~ 2.11.2.3 800 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 2.11.2.3 850 ~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~ 2.11.2.3 900 ~~~~~~~-~~~~~---~~-~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~ 2.11.2.3 950 ~~~~~~~~|~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~-~~~~~~ 2.11.2.3 1000 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 2.11.2.3 1050 ~~~~~~~~~~~~~~~~~~~~~~~~---------~~~~~~~~~~~~~~-~~ 2.11.2.3 1100 ~~~~~--~~~~~~~~~-~~~-~~-~-~~~~~~-~~~~~~~~~----~~~~ 2.11.2.3 1150 ~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~ 2.11.2.3 1200 ~~~~~~~~~~~~~~--~~~~~~~~~~~-~-~~~~~-~~~~~~~~~--~~~ 2.11.2.3 1250 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~- 2.11.2.3 1300 ----------~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 2.11.2.3 1350 ~~~~~-~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~-- 2.11.2.3 1400 --~~-~~~~~~~-~~~~~~~~~~~~~~-----------~--------~~~ 2.11.2.3 1450 ~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------------- 2.11.2.3 1500 --------------------------------~~~~~~~~~~~~-~~~~~ 2.11.2.3 1550 ~~~~~~~~~~-~~~~~~~~~~~|~~~~~~~~~~~~~~~~~~~~~~~~~~~ 2.11.2.3 1600 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~ 2.11.2.3 1650 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 2.11.2.3 1700 ~~~~---~~|~~~-~~~~~~~------~~~~~~~~~---~~~~-~~~~~~ 2.11.2.3 1750 ~~-~~~~~~~~~~~~~~-------~~~~~~-----~~--------~~~~~ 2.11.2.3 1800 ~~-------------~~~~~~~~~|~~~~~~~~~~~~~~~~~~-~~~~~~ 2.11.2.3 1850 ~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 2.11.2.3 1900 ~~~~~~~~~~~~~~~~-~~~~~~~-~~~~~-~~~~~~~~~~~~~~~~~~~ 2.11.2.3 1950 ~~~~~~~~~----------------------------------------- 2.11.2.3 2000 -------------------------------------------------- 2.11.2.3 2050 -----------------------------~--~~~~~---~~~~~~~~~~ 2.11.2.3 2100 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~-------~~~~~~~ 2.11.2.3 2150 ~~~------~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~ 2.11.2.3 2200 ~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~ 2.11.2.3 2250 ~~~---~~~~~~~~--------------------~----~~~~-~-~~~~ 2.11.2.3 2300 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~ 2.11.2.3 2350 ~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--- 2.11.2.3 2400 ---~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~-~~~~-- 2.11.2.3 2450 -----------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 2.11.2.3 2500 ~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~ 2.11.2.3 2550 ~~~~~--~~~~-~~~~~~~~~~~~~~~-~~~~-~~~~~~~~~~~~~~~~~ 2.11.2.3 2600 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 2.11.2.3 2650 ~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 2.11.2.3 2700 ~~~~~~~~~~~~~~~~| Cynp.par_C 0 ~~~~~~~~~~~UACCAUGGAGAG-UU(U-GA)UCCU|GGCUCAGGAUGAA Cynp.par_C 50 CGC-UGGCGGUAUGCUU--AACACAUGCAAGUCGAACG-AA--------- Cynp.par_C 100 -------GAUC(GC------------------AA------)GAUC----- Cynp.par_C 150 -----|----------UU--AGU--GGCGGACGGGUGAGUAA-CGCGUGA Cynp.par_C 200 GA-AUCUAC-CCUU------------------------------------ Cynp.par_C 250 -------------------------------------------------A Cynp.par_C 300 GGA---------GGGGGACAACAG------------------------UU Cynp.par_C 350 G(GAAA)CGA-CUGCUAAUACC-CCAU-AU-------------------- Cynp.par_C 400 -----------------CCCA-------(UUCG---)-------UGGU-- Cynp.par_C 450 ---GAAA-----------------------AGA-------------(--- Cynp.par_C 500 -------GUAA------)---------|----UCUGCCUGAGGA-AGA|G Cynp.par_C 550 -CUCGCGU|-CUGAUUA-GCUAGUUGG-UG-GG(G-UAAAGG)-CCUACC Cynp.par_C 600 AA|GGCGACGAU-CAGUAGCUG|GUCU(GAGA)GGAUGAUCAGC|CACAC Cynp.par_C 650 UGGGA(CUGAGAUACG)GCCCAGA-C--UCC(UA-CG)GG-A--GGCAG- Cynp.par_C 700 CAGUGGGG-AAUUUUCCG-CAAU-GGGC-(-GAAA)-GCCU-GACGGA|G Cynp.par_C 750 CAAUACCGCGUGAGGGAAGACGGCC(---UGUG--)GG-UU--GUAAACC Cynp.par_C 800 UC|UUUU-CUUAGGGAAGAA----------(--UCAA--)---------- Cynp.par_C 850 UGACG-GU-ACCU-AAGGAA-UAAGCAUC-GGCU-AACU-CCGUG(CCA- Cynp.par_C 900 -GCAGCC-GCGGU---AA-)UACGGAG|GAUGCAAGCGUUAU-CCGGAAU Cynp.par_C 950 CAUUGGGC|GUAAAGAGUUCGUAGGUG|GCUAAGCAAG-|UCU-GUUGUU Cynp.par_C 1000 AAAGGCUGGGGC(------------------------------------- Cynp.par_C 1050 ---------------------------------UUA)ACCCCAA-AA-AG Cynp.par_C 1100 GCAAU--GGA-AAC-U-GUU-UG-G-CUUGAG-UA-CGGUA-----GGGG Cynp.par_C 1150 CAGAG|GGAAUUCCUGG-UGUAGCG(GUGAAA)UGCGUAGAUA---UCAG Cynp.par_C 1200 GAAGAACACCGAU---GGC(GAAA)GC-A-CUCUG-CUG-GGCCG--U-- Cynp.par_C 1250 -------------------------------------------------- Cynp.par_C 1300 ----------UACUGACACU-GAG-GAACGAAAGCUAGGGUAGCAAAUGG Cynp.par_C 1350 G(AUU-A-GAUAC)-CCCAGUAG--UC-CUA-GCCGUAAACUAUGGAU-- Cynp.par_C 1400 --AC-UA|GGUG-UUGUGCG------U-----------(--------AUC Cynp.par_C 1450 GA---)CC------------------------------------------ Cynp.par_C 1500 ---------------------------------CGUACAGUACC-GUAGC Cynp.par_C 1550 (UAAC)GCGU-UAAGUAUCC|C|GCCUGGGGAGUACGCUC(GCAA)GAGU Cynp.par_C 1600 GAAACUCAAAGGAAUUGACGGGGGCCC-GCACA-------AGCGGU-GGA Cynp.par_C 1650 GUAUGUGGUUUAAUUCG-(AUGCAACG)CGAAGAACCUUACCAGGGUUUG Cynp.par_C 1700 ACA----UG|-UC-GCG--AA------UUUUCUU-----(GAA-A-)GAG Cynp.par_C 1750 AA-AAG---UG--CC---------(UUCG------)---------GGAA- Cynp.par_C 1800 ---------------|CGCGAACA|C|AGGUGGUGCAUG|GCU-GUCGUC Cynp.par_C 1850 A|-G-CUCGU|GUC(GUGA)GAUGUUGGG(UUAAGU)CCCGCAACGAGCG Cynp.par_C 1900 CAACCCUCG|UUUUUA-G-UUGCC-AUCA--UUC---------------- Cynp.par_C 1950 -------------------------------------------------- Cynp.par_C 2000 -------------------------------------------------- Cynp.par_C 2050 -----------------------------(----------)----AGUUG Cynp.par_C 2100 |GGCACUCUAAAGAGACUGCCGGU(GACAA----)--------------- Cynp.par_C 2150 ---------GCCGGAGGAAGGUGGGGAUGACGUC-AA--GUCAGCAUGCC Cynp.par_C 2200 CCUUAUACCCUGGGCUAC-ACACGUACUACAAUGGU--CGGGACAAUAGG Cynp.par_C 2250 UU----GCCAACUU--------------------(----GCGA-)----- Cynp.par_C 2300 --------------AAGU-GAGCUAAUC-CGUU-AAACCCGGCCUCAGUU Cynp.par_C 2350 CAGAUUGCAGGC(--UGCAACUC)GCCUGCAUGAAGGUGGAAUCGCU--- Cynp.par_C 2400 ---AGUAAU-CGCCGG(UC--AGCUAU)ACGGCGGUGAAUUC--GUU--- Cynp.par_C 2450 -----------------CCCGGGCCUUGUACACACCGCCCGUCACACCAC Cynp.par_C 2500 GGGAGUCGG-CCAUGCCCGAAGUCGUU---ACCCU-AACC-(----AUUU Cynp.par_C 2550 C------)-GG-AGG-GGG-AU-GCCU-AAGG-CAGGGCUGGUGACUGGG Cynp.par_C 2600 GUGAAGUCGUAACAAGGUAGCCGUACU(GGAA)GGUGCGGCUGGAUCACC Cynp.par_C 2650 UCCUUU.-|....................................~~~~~ Cynp.par_C 2700 ~~~~~~~~~~~~~~~~| 2.11.2.4 0 x~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~ 2.11.2.4 50 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 2.11.2.4 100 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~ 2.11.2.4 150 ~~~~~~---------~~~~~~~~--~~~~~~~~~~~~~~~~~-~~~~~~~ 2.11.2.4 200 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 2.11.2.4 250 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~ 2.11.2.4 300 ~~~---------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 2.11.2.4 350 ~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~-------------------- 2.11.2.4 400 -------~~~~~~~~~~~~~~~------~~~~~~~-~~------~~~~~~ 2.11.2.4 450 ~~~~~~~~~~~~------------------~~~~~~~~~~~~~~~~~~~~ 2.11.2.4 500 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~ 2.11.2.4 550 -~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~ 2.11.2.4 600 ~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 2.11.2.4 650 ~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~-~~~~~-~--~~~~~~ 2.11.2.4 700 ~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~-~~~~~~~~~~-~~~~~~~~ 2.11.2.4 750 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~--~~~~~~~ 2.11.2.4 800 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 2.11.2.4 850 ~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~ 2.11.2.4 900 ~~~~~~~-~~~~~---~~-~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~ 2.11.2.4 950 ~~~~~~~~|~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~-~~~~~~ 2.11.2.4 1000 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 2.11.2.4 1050 ~~~~~~~~~~~~~~~~~~~~~~~~---------~~~~~~~~~~~~~~-~~ 2.11.2.4 1100 ~~~~~--~~~~~~~~~-~~~-~~-~-~~~~~~-~~~~~~~~~----~~~~ 2.11.2.4 1150 ~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~ 2.11.2.4 1200 ~~~~~~~~~~~~~~--~~~~~~~~~~~-~-~~~~~-~~~~~~~~~--~~~ 2.11.2.4 1250 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~- 2.11.2.4 1300 ----------~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 2.11.2.4 1350 ~~~~~-~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~-- 2.11.2.4 1400 --~~-~~~~~~~-~~~~~~~~~~~~~~-----------~--------~~~ 2.11.2.4 1450 ~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------------- 2.11.2.4 1500 --------------------------------~~~~~~~~~~~~-~~~~~ 2.11.2.4 1550 ~~~~~~~~~~-~~~~~~~~~~~|~~~~~~~~~~~~~~~~~~~~~~~~~~~ 2.11.2.4 1600 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~ 2.11.2.4 1650 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 2.11.2.4 1700 ~~~~---~~|~~~-~~~~~~~------~~~~~~~~~---~~~~-~~~~~~ 2.11.2.4 1750 ~~-~~~~~~~~~~~~~~-------~~~~~~-----~~--------~~~~~ 2.11.2.4 1800 ~~-------------~~~~~~~~~|~~~~~~~~~~~~~~~~~~-~~~~~~ 2.11.2.4 1850 ~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 2.11.2.4 1900 ~~~~~~~~~~~~~~~~-~~~~~~~-~~~~~-~~~~~~~~~~~~~~~~~~~ 2.11.2.4 1950 ~~~~~~~~~----------------------------------------- 2.11.2.4 2000 -------------------------------------------------- 2.11.2.4 2050 -----------------------------~--~~~~~---~~~~~~~~~~ 2.11.2.4 2100 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~-------~~~~~~~ 2.11.2.4 2150 ~~~------~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~ 2.11.2.4 2200 ~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~ 2.11.2.4 2250 ~~~---~~~~~~~~--------------------~----~~~~-~-~~~~ 2.11.2.4 2300 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~ 2.11.2.4 2350 ~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--- 2.11.2.4 2400 ---~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~-~~~~-- 2.11.2.4 2450 -----------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 2.11.2.4 2500 ~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~ 2.11.2.4 2550 ~~~~~--~~~~-~~~~~~~~~~~~~~~-~~~~-~~~~~~~~~~~~~~~~~ 2.11.2.4 2600 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 2.11.2.4 2650 ~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 2.11.2.4 2700 ~~~~~~~~~~~~~~~~| Psan.galea 0 .......................-..(....)....|............. Psan.galea 50 .................................................. Psan.galea 100 ...........(......................-----.)......... Psan.galea 150 .....|---------........--.................-....... Psan.galea 200 .................................................. Psan.galea 250 ...............................................--. Psan.galea 300 ...---------...................................... Psan.galea 350 .(GAAA)UGA-CUGCUAAUACC-GGAU-GU-------------------- Psan.galea 400 ------------------GCU-------(UC-G---)-------GGU--- Psan.galea 450 ---GAAA-----------------------G---------------(--- Psan.galea 500 -------UUNA------)---------|------UGCCUGUAGA-UGA|G Psan.galea 550 -CUUGCGU|-CCGAUUA-GCUAGAUGG-AG-UG(G-UAACGG)-CACACC Psan.galea 600 AU|GGCGACGAU-CGGUAACUG|GUCU(GAGA)GGAUGACCAGU|CACAC Psan.galea 650 UGGAA(CUGAGACACG)GUCCAGA-C--UCC(UA-CG)GG-A--GGCAG- Psan.galea 700 CAGUGGGG-AAUUUUCCG-CAAU-GGGC-(-GAAA)-GCCU-NACGGA|G Psan.galea 750 CAAUACCGCGUGAGGGACGAAGGUC(---UGUN--)GA-UU--GUAAACC Psan.galea 800 UN|UUUU-GUNAGGGAAGA-----------(--UAAU--)---------- Psan.galea 850 -GANN-GU-ACCUACACGAA-UAAGCAUC-GGCU-AUCU-.....(.... Psan.galea 900 .......-.....---..-).......|..............-....... Psan.galea 950 ........|..................|.UUUUAUAAG-|UCU-GUUGUC Psan.galea 1000 AAA-CCCAGGGC(------------------------------------- Psan.galea 1050 ---------------------------------UCA)ACCUUGG-AA-AG Psan.galea 1100 GCAAU--GGA-AAC-U-GUG-AG-A-CUAGAG-AG-AGAUA-----GGGG Psan.galea 1150 CAGGA|GGAAUUCCAGG-UGUAGCG(GUGAAA)UGCGUAGAUA---UCUG Psan.galea 1200 GAAGAACACCAGU---GGC(GAAA)GC-G-UCCUG-CUG-GAUCU--C-- Psan.galea 1250 -------------------------------------------------- Psan.galea 1300 ----------AACUGACGCU-GAA-GUACNAAAGCUAGGGGAGCGAAUGG Psan.galea 1350 G(AUU-A-GAUAC)-CCCAGUAG--UC-CUA-GCCGUAAACGAUGGGU-- Psan.galea 1400 --AC-UA|GGUG-UUGGCCG------U-----------(--------AUN Psan.galea 1450 NA---)CC------------------------------------------ Psan.galea 1500 ---------------------------------CGGUCAGUGCC-GUACG Psan.galea 1550 (UAAC)GCGU-UAAGUACCC|C|GCCUGGGGAGUACGGUC(GCAA)GAU. Psan.galea 1600 ..............................................-... Psan.galea 1650 ..................(........)...................... Psan.galea 1700 ....---..|...-.......------.........---(...-..)... Psan.galea 1750 ..-.......G--C----------(U-CG------)---------GGAG- Psan.galea 1800 ---------------|CGCGAASA|C|AGGUGGUGCAUG|GCU-GUCGUC Psan.galea 1850 A|-G-CUCGU|GUC(GUGA)GAUGUUGGG(UUAAGU)CCCGCAACGAGCG Psan.galea 1900 CAACCCUCG|UAUUUA-G-UUGCC-AUCA--UUA---------------- Psan.galea 1950 -------------------------------------------------- Psan.galea 2000 -------------------------------------------------- Psan.galea 2050 -----------------------------(----------)----AGUUG Psan.galea 2100 |GGCRCUCUAGAUAGACUGCCGGU(GACAA----)--------------- Psan.galea 2150 ---------ACCGGAGGAAGGUGGGGAUGACGUC-AA--GUCAUCAUGCC Psan.galea 2200 CCUUACGCCUUGGGCUAC-ACACGUACUACAAUGGC--CGGGACAAAGAG Psan.galea 2250 UC----GCGAGCAU--------------------(----GCGA-)----- Psan.galea 2300 --------------AUGC-AAGCUAAUC-UCAU-AAACCCNNUCUUAGUU Psan.galea 2350 CAGAUUGCAGGC(--UGCAACUC)GCCUGCAUGAAGGCGGAAUCGCU--- Psan.galea 2400 ---AGUAAU-CGCAGG(UC--AGC-AU)ACUGCGGUNAAUAC.-....-- Psan.galea 2450 -----------------................................. Psan.galea 2500 ...........................---...........(........ Psan.galea 2550 .....--)...-...............-....-................. Psan.galea 2600 ...........................(....)................. Psan.galea 2650 .......-|....................................~~~~~ Psan.galea 2700 ~~~~~~~~~~~~~~~~| Psan.6903 0 .......................-..(....)....|............. Psan.6903 50 .................................................. Psan.6903 100 ...........(......................-----.)......... Psan.6903 150 .....|---------........--.................-....... Psan.6903 200 .................................................. Psan.6903 250 ...............................................--. Psan.6903 300 ...---------...................................... Psan.6903 350 .(....)...-...................-------------------- Psan.6903 400 -------...............------(......-).------...... Psan.6903 450 ............------------------................(... Psan.6903 500 .................).........|................-...|. Psan.6903 550 -.......|....AUUA-GCUAGAUGG-UG-GG(G-UAACGG)-CCUACC Psan.6903 600 AU|GGCGACGAU-CGAUNACUG|GUCU(GAGA)GGAUGACCAGN|CNCNC Psan.6903 650 UGGGA(CUGAGACNCG)GCCNNNC-C--UCC(UA-CG)GG-A--GNCNG- Psan.6903 700 CNGUGGGG-AAUUUUCCG-CAAU-GGGC-(-GAAA)-GCCU-GACGGA|G Psan.6903 750 CAAUGCCGCGUGAGGGACGAAGGUC(---UGUG--)GA-UU--GUNAACC Psan.6903 800 NN|UUUU-GUUGGGGAAGAU----------(-GAUAA--)---------- Psan.6903 850 UGACG-GU-ACCC-AACGAA-UAAGCAUC-GGCU-AACU-.....(.... Psan.6903 900 .......-.....---..-).......|..............-....... Psan.6903 950 ........|..................|..........-|...-...... Psan.6903 1000 ............(..................................... Psan.6903 1050 ........................---------...)..........-.. Psan.6903 1100 .....--......CGU-GUG-AG---CUAGAG-NG-AGAUA-----GGGG Psan.6903 1150 NAGGA|GGAAUUCCAGG-UGUAGCG(GUGAAA)UGCGUAGAUA---UCUG Psan.6903 1200 GAAGAACACCAGU---GGC(GAAA)GC-G-UCCUU-CUG-GAUCU--U-- Psan.6903 1250 -------------------------------------------------- Psan.6903 1300 ----------AACUGACGCU-GAA-GUACNNAAGCUAGGGGAGCGAAUGG Psan.6903 1350 G(AUU-A-GAUAC)-CCCAGUAG--UC-CUA-GCCGUAAACGAUGGAC-- Psan.6903 1400 --AC-UA|GGUG-UUGGCCG------U-----------(--------AUC Psan.6903 1450 GA---)CC------------------------------------------ Psan.6903 1500 ---------------------------------CGGUCAGUGCC-GUACG Psan.6903 1550 (UAAC)GCGU-UAAGUGUCC|N|GCCUGGGGAGUACGGUC(GCAA)GAU. Psan.6903 1600 ..............................................-... Psan.6903 1650 ..................(........)...................... Psan.6903 1700 ....---..|...-.......------.........---(...-..)... Psan.6903 1750 ..-..............-------(.....-----).--------..... Psan.6903 1800 ..-------------|.......A|C|AGGUGGUGCAUG|GCU-GUCGUC Psan.6903 1850 A|-G-CUCGU|GUC(GUGA)GAUGUUGGG(UUAAGU)CCCGCAACGAGCG Psan.6903 1900 CUUCCCUCG|UAUUUA-G-UUGCC-AUCA--UUA---------------- Psan.6903 1950 -------------------------------------------------- Psan.6903 2000 -------------------------------------------------- Psan.6903 2050 -----------------------------(----------)----AGUUG Psan.6903 2100 |GGCACUCUAGAUAGACUGCCGGU(GACAA----)--------------- Psan.6903 2150 ---------ACCGGAGGAAGGUGGGGAUGACGUC-AA--GUCAUCAUGCC Psan.6903 2200 CCUUACGCCUUGGGCUAC-ACACGUACUACAAUGGC--CGGGACAAAGAG Psan.6903 2250 UC----GCAAGCAU--------------------(----GCGA-)----- Psan.6903 2300 --------------AUGC-AAGCCUAUC-UCAU-AAACCCNGUCUUAGUU Psan.6903 2350 CAGAUUGCAGGC(--UGCAACUC)GCCUNCAUGNAGGCGGAAUCGCU--- Psan.6903 2400 ---AGUAAU-CGCAGG(UC--AGC-AU)ACUGCGGUNAAUAC--GUU--- Psan.6903 2450 -----------------C................................ Psan.6903 2500 ...........................---...........(........ Psan.6903 2550 .....--)...-...............-....-................. Psan.6903 2600 ...........................(....)................. Psan.6903 2650 .......-|....................................~~~~~ Psan.6903 2700 ~~~~~~~~~~~~~~~~|