Triloop Frequency Tables for Lonepair Triloops in 16S rRNA

Last modified on September 16, 2002

{64:68}: 65 66 67     ({64:68}: 65 66 67 in E. coli)
Aln AAC AAG AAU AGA AGC AGG CAC CAG GAC UAC UAU gap Other N Seq
3 39.5 13.9 0.4 0.4 31.2 2.7 1.2 2.3 1.5 1.1 0.2  1.3  4.2   1 5560
B 49.6  0.4  0.1  0.1 39.5  3.1  0.9  0.1  1.9  0.7 --  0.7  2.9   28 4390
A  9.0  0.5  7.0 11.0 0.5  8.0 15.0 -- -- 16.5  5.5 15.0 12.0   16  200
C 43.0 --  1.8 -- -- --  1.2 -- 27.3 24.8 --  1.3 0.6    6  165
E  0.1 77.9 -- -- --  0.2 -- 13.0 -- -- --  0.9 7.9   24  970
M  6.2 --  0.8 -- -- -- -- -- --  1.3  0.4 90.4  0.9 11 931

{318:322}: 319 320 321     ({323:327}: 324 325 326 in E. coli)
Aln GAA GAG gap Other N Seq
3  0.0 97.6  0.1  2.3   1 6320
B  0.8 97.7  0.1  1.4   13 5066
A -- 97.4 --  2.6    3  229
C  2.4 95.3 --  2.3    4  169
E -- 97.1  0.1  2.8   10 1025
M  5.4  3.9 89.8  0.9    9  985

{911:915}: 912 913 914     ({934:938}: 935 936 937 in E. coli)
Aln ACA ACC CCA CCC CCU CUA gap Other N Seq
3 83.0 16.0 -- -- -- --  0.2  0.8   1 5515
B 99.2 --  0.1 -- -- --  0.1  0.6   14 4312
A 95.9  0.5 -- -- -- -- --  3.6    3  218
C 97.6 -- -- -- -- --  1.2  1.2    3  168
E  9.3 89.5 -- -- -- --  0.2  1.0    6  984
M  2.7  3.1 40.5 27.9  9.3  5.0  0.3 11.2   32 1144

{933:937}: 934 935 936     ({956:960}: 957 958 959 in E. coli)
Aln CAA UAA gap Other N Seq
3  1.7 97.7  0.2  0.4   1 5457
B  0.6 98.8  0.2  0.4   10 4255
A 23.7 76.3 -- --    2  211
C  0.6 97.6  1.2  0.6    3  168
E  1.7 97.8  0.2  0.3    4  990
M  0.1  8.5 91.2  0.2    4 1144

{1035:1039}: 1036 1037 1038     ({1053:1057}: 1054 1055 1056 in E. coli)
Aln CAU UAC gap Other N Seq
3 96.8 --  0.1  3.1    1 5719
B 96.1 --  0.1  3.8    7 4498
A 100.0 -- -- --    1  202
C 97.6 ---  1.2  1.2    3  169
E 99.8 --  0.1  0.1    2 1014
M  5.9 89.0  0.1  5.0   10 1143

{1158:1162}: 1159 1160 1161     ({1177:1181}: 1178 1179 1180 in E. coli)
Aln GAA CGA GAG gap Other N Seq
3  95.4  2.4  1.0  0.3  0.6   16 5837
B 99.5 --  0.3  0.0  0.0    6 4611
A 96.4 --  3.1  0.5 --    2  195
C 94.2 --  1.2  1.8  3.0    6  172
E 77.3 13.6  3.7  1.5  4.0   13 1021
M  2.8  0.3  0.1 11.9 87.4   51 1143

{1296:1300}: 1297 1298 1299     ({1315:1319}: 1316 1317 1318 in E. coli)
Aln GAA GCA GUA gap Other N Seq
3  6.8 87.9  4.1  0.1  1.1   1 5795
B  6.9 92.4  0.3  0.1  0.3   11 4562
A 32.4 33.8 32.9 --  0.9    4  207
C 12.8 86.0 --  0.6  0.6    3  172
E  1.3 79.2 15.0  0.1  4.4    4 1025
M 88.2  3.0  4.5  0.3  4.0   19 1122