Accessions Length A G C U Total AUGC Count Other %GC
Archaea
Aeropyrum pernix AP000062 1504 278 569 458 196 1501 3 68%
Archaeoglobus fulgidus X05567 AE000965 1493 306 534 419 233 1492 1 64%
Haloarcula marismortui rrnA X61688 1473 348 476 381 267 1472 1 58%
Haloarcula marismortui rrnB X61689 1473 362 462 369 279 1472 1 56%
Halobacterium sp. AE005128 1473 342 483 376 272 1473 0 58%
Haloferax volcanii K00421 1474 359 466 373 276 1474 0 57%
Methanobacterium formicicum M36508 1477 348 472 355 301 1476 1 56%
Methanococcus jannaschii U67517 L77117 1478 295 527 426 230 1478 0 64%
Methanococcus vannielii M36507 1468 335 474 371 286 1466 2 58%
Methanospirillum hungatei M60880 1467 356 471 347 291 1465 2 56%
Methanothermobacter thermautotrophicus AE000930 1481 338 482 376 283 1479 2 58%
Natronobacterium innermongoliae AF009601 1473 342 481 371 278 1472 1 58%
Natronorubrum bangense Y14028 1476 351 475 373 276 1475 1 57%
Pyrococcus abyssi AJ248283 1512 291 555 445 221 1512 0 66%
Pyrococcus furiosus U20163 1496 291 551 438 215 1495 1 66%
Pyrococcus horikoshii AP000001 1500 289 554 440 217 1500 0 66%
Pyrodictium occultum M21087 1498 280 565 463 186 1494 4 69%
Sulfolobus acidocaldarius D14876 1495 323 519 418 232 1492 3 63%
Sulfolobus P2 NPA1 1497 323 519 415 238 1495 2 62%
Sulfolobus solfataricus X03235 1495 322 519 419 232 1492 3 63%
Thermococcus celer M21529 1487 291 546 431 218 1486 1 66%
Thermoplasma acidophilum AL445067 M38637 1473 366 456 352 297 1471 2 55%
Thermoproteus tenax M35966 1505 297 562 449 195 1503 2 67%
Bacteria
Acidobacterium capsulatum D26171 1498 350 452 339 277 1418 80 53%
Acinetobacter calcoaceticus M34139 1537 387 460 329 330 1506 31 51%
Actinomyces israelii X82450 1550 255 534 337 313 1439 111 56%
Aeromonas hydrophila X60407 1544 369 492 343 298 1502 42 54%
Agrobacterium tumefaciens M11223 1489 364 471 344 310 1489 0 55%
Allochromatium vinosum M26629 1528 353 489 364 277 1483 45 56%
Anabaena sp. X59559 1489 389 469 333 298 1489 0 54%
Aquifex aeolicus AE000709 AE000751 1588 313 564 468 242 1587 1 65%
Aquifex pyrophilus M83548 1582 317 561 454 232 1564 18 64%
Arthrobacter globiformis M23411 1531 347 509 364 311 1531 0 57%
Azorhizobium caulinodans D11342 1482 355 470 355 287 1467 15 56%
Bacillus anthracis X55059 1552 365 432 325 300 1422 130 49%
Bacillus cereus X55060 1551 368 442 326 304 1440 111 50%
Bacillus halodurans AB013373 1554 388 487 359 319 1553 1 54%
Bacillus subtilis K00637 1552 383 490 365 314 1552 0 55%
Bacteroides fragilis M61006 1537 405 446 329 356 1536 1 50%
Bartonella bacilliformis Z11683 1488 343 437 328 291 1399 89 51%
Bartonella henselae M73229 1487 346 446 330 290 1412 75 52%
Bartonella quintana M11927 1493 365 465 347 315 1492 1 54%
Beggiatoa sp. 1401-13 L40997 1522 387 445 314 313 1459 63 50%
Bordetella bronchiseptica U04948 1532 378 490 363 301 1532 0 56%
Bordetella parapertussis U04949 1531 363 465 347 283 1458 73 53%
Bordetella pertussis U04950 1531 361 468 344 285 1458 73 53%
Borrelia burgdorferi M88329 1537 447 436 281 373 1537 0 47%
Borrelia hermsii U42292 1536 440 440 286 357 1523 13 47%
Brachyspira hyodysenteriae U23035 1515 397 440 305 321 1463 52 49%
Bradyrhizobium japonicum Z35330 1490 362 467 361 300 1490 0 56%
Brevinema andersonii L31543 1530 377 454 314 298 1443 87 50%
Brucella melitensis L26166 1489 335 452 333 282 1402 87 53%
Buchnera sp. APS AP000398 1548 420 414 318 308 1460 88 47%
Burkholderia mallei S55008 1533 341 433 308 258 1340 193 48%
Burkholderia sp. U37342 1535 378 487 354 294 1513 22 55%
Campylobacter jejuni Z29326 1515 417 429 323 344 1513 2 50%
Campylobacter sputorum X67775 1744 536 416 318 424 1694 50 42%
Chlamydia muridarum AE002280 1554 401 470 327 352 1550 4 51%
Chlamydia trachomatis U68443 1554 401 472 325 356 1554 0 51%
Chlamydophila pneumoniae L06108 1554 420 452 316 366 1554 0 49%
Chlamydophila psittaci U68447 1552 411 454 324 363 1552 0 50%
Chlorobium vibrioforme M62791 1507 399 456 332 316 1503 4 52%
Chlorogloeopsis sp. PCC 7518 X68780 1490 388 481 336 277 1482 8 55%
Chromohalobacter marismortui X87222 1538 356 489 360 269 1474 64 55%
Citrobacter freundii M59291 1542 368 463 332 294 1457 85 52%
Clostridium botulinum F L37593 1512 383 447 314 307 1451 61 50%
Clostridium difficile X73450 1503 385 444 319 314 1462 41 51%
Clostridium innocuum M23732 1543 427 464 330 317 1538 5 51%
Clostridium perfringens M69264 1514 400 462 333 318 1513 1 53%
Clostridium tetani X74770 1517 402 461 335 310 1508 9 52%
Comamonas testosteroni M11224 1536 384 482 356 314 1536 0 55%
Corynebacterium diphtheriae X84248 1520 327 504 339 312 1482 38 55%
Coxiella burnetii M21291 1541 369 461 330 311 1471 70 51%
Cristispira CP1 U42638 1528 440 405 276 370 1491 37 45%
Deferribacter thermophilus U75602 1559 346 533 389 283 1551 8 59%
Deinococcus radiodurans M21413 1504 365 483 351 303 1502 2 55%
Desulfovibrio desulfuricans M34113 1551 387 488 364 311 1550 1 55%
Dichelobacter nodosus M35016 1533 410 465 330 324 1529 4 52%
Edwardsiella tarda AF015259 1542 366 452 321 289 1428 114 50%
Enterococcus faecalis Y18293 1561 365 439 343 302 1449 112 50%
Enterococcus faecium AF070223 1538 390 452 350 318 1510 28 52%
environ.Eubacteria clone W15 NPA 1521 410 392 281 350 1433 88 44%
Epulopiscium sp. M99572 1511 406 427 299 301 1433 78 48%
Erysipelothrix rhusiopathiae M23728 1539 411 449 303 317 1480 59 49%
Escherichia coli J01695 1542 389 487 352 314 1542 0 54%
Eubacterium brachy Z36272 1520 407 454 319 320 1500 20 51%
Francisella tularensis Z21931 1525 399 470 318 334 1521 4 52%
Frankia sp. M55343 1512 328 527 387 270 1512 0 60%
Fusobacterium necrophorum X74408 1507 398 451 324 326 1499 8 51%
Fusobacterium nucleatum subsp. nucleatum M58683 1522 411 437 299 347 1494 28 48%
Gemmata obscuriglobus X56305 1497 362 478 351 261 1452 45 55%
Geotoga subterranea L10659 1530 420 491 334 283 1528 2 54%
Gluconacetobacter liquefaciens X75617 1494 350 495 343 298 1486 8 56%
Haemobartonella felis U95297 1487 397 361 261 358 1377 110 42%
Haemophilus influenzae X87977 1539 374 457 297 313 1441 98 49%
Haemophilus influenzae (operons A-F) U32741 U32744 U32755 U32847 U32697 U32708 1539 401 485 315 338 1539 0 52%
Halomonas halodenitrificans L04942 1538 377 487 364 298 1526 12 55%
Helicobacter pylori M88157 1503 386 418 310 330 1444 59 48%
Heliobacterium chlorum M11212 1526 369 502 366 275 1512 14 57%
Holophaga foetida X77215 1540 362 498 336 304 1500 40 54%
Isosphaera pallida X64372 1518 320 503 379 236 1438 80 58%
Klebsiella pneumoniae X80684 1541 352 463 345 283 1443 98 52%
Lactobacillus acidophilus M58802 1568 397 462 353 316 1528 40 52%
Lactococcus lactis subsp. lactis AE006456 1551 411 465 333 342 1551 0 51%
Legionella pneumophila M59157 1543 388 475 320 318 1501 42 52%
Leptonema illini M88719 1528 391 478 367 290 1526 2 55%
Leptospira interrogans X17547 1508 393 456 342 317 1508 0 53%
Leptospirillum ferriphilum AF356830 1553 376 513 373 260 1522 31 57%
Listeria monocytogenes M58822 1552 383 459 342 319 1503 49 52%
Mesorhizobium loti AP003001 1486 355 475 358 294 1482 4 56%
Methylobacterium sp. Z23160 1480 333 472 349 283 1437 43 55%
Methylococcus capsulatus X72771 1534 362 482 336 292 1472 62 53%
Micrococcus luteus M38242 1524 344 488 355 305 1492 32 55%
Microcystis aeruginosa U03402 Z28699 1489 353 458 332 268 1411 78 53%
Mycobacterium avium X52918 1533 321 496 345 298 1460 73 55%
Mycobacterium leprae X56657 1548 344 513 365 326 1548 0 57%
Mycobacterium tuberculosis X52917 1534 321 502 349 292 1464 70 55%
Mycoplasma capricolum X00921 1525 430 432 303 358 1523 2 48%
Mycoplasma gallisepticum M22441 1519 438 414 290 377 1519 0 46%
Mycoplasma genitalium U39694 1519 442 409 284 384 1519 0 46%
Mycoplasma hyopneumoniae Y00149 1537 465 400 302 370 1537 0 46%
Mycoplasma mycoides M23943 1524 399 392 278 330 1399 125 44%
Mycoplasma pneumoniae M29061 1516 426 396 272 367 1461 55 44%
Myxococcus xanthus M34114 1540 384 488 372 295 1539 1 56%
Neisseria gonorrhoeae X07714 1544 380 492 357 315 1544 0 55%
Neisseria meningitidis AE002364 1544 390 482 355 317 1544 0 54%
Nocardia asteroides X80606 1517 333 497 359 280 1469 48 56%
Oscillatoria agardhii X84811 1490 387 471 331 274 1463 27 54%
Pasteurella multocida M35018 1542 392 468 313 327 1500 42 51%
Petrotoga miotherma L10657 1529 373 431 274 249 1327 202 46%
Pirellula marina X62912 1472 358 474 338 302 1472 0 55%
Pirellula staleyi M34126 1525 376 482 348 315 1521 4 54%
Planctomycetaceae Schlesner 670 X81948 1519 365 480 345 300 1490 29 54%
Plesiomonas shigelloides X74688 1542 370 459 323 302 1454 88 51%
Pleurocapsa sp. X78681 1489 383 449 322 307 1461 28 52%
Porphyromonas gingivalis L16492 1531 377 443 334 313 1467 64 51%
Proteus vulgaris X07652 1543 402 478 336 327 1543 0 53%
Pseudomonas aeruginosa M34133 1536 379 470 334 301 1484 52 52%
Pseudomonas putida D84020 1537 386 476 344 321 1527 10 53%
Pseudomonas sp. U37339 1537 367 468 333 301 1469 68 52%
Psychrobacter pacificensis AB016054 1536 405 472 335 324 1536 0 53%
Rhodobium orientis D30792 1486 335 453 343 277 1408 78 54%
Rhodoblastus acidophilus M34128 1491 364 449 341 300 1454 37 53%
Rhodococcus erythropolis AF001265 1519 345 509 370 295 1519 0 58%
Rickettsia bellii U11014 1502 397 447 321 336 1501 1 51%
Rickettsia prowazekii M21789 1502 400 445 314 343 1502 0 51%
Rickettsia rickettsii L36217 1499 383 429 307 321 1440 59 49%
Salmonella typhimurium X80681 1540 390 484 349 310 1533 7 54%
Serratia marcescens M59160 1542 385 472 342 312 1511 31 53%
Shewanella putrefaciens X81623 1543 379 491 350 314 1534 9 55%
Shigella dysenteriae X96966 1540 375 472 341 299 1487 53 53%
Spirochaeta aurantia M57740 1560 389 483 325 323 1520 40 52%
Staphylococcus aureus L36472 1555 417 452 342 344 1555 0 51%
Streptobacillus moniliformis Z35305 1521 435 427 281 342 1485 36 47%
Streptococcus mutans X58303 1546 340 394 290 283 1307 239 44%
Streptococcus pneumoniae X58312 1550 323 397 291 279 1290 260 44%
Streptococcus pyogenes X59029 1549 335 394 284 265 1278 271 44%
Streptomyces acidiscabies D63865 1530 344 516 386 284 1530 0 59%
Streptomyces albidoflavus Z76676 1527 331 504 371 269 1475 52 57%
Streptomyces albus X53163 1525 270 426 307 237 1240 285 48%
Streptomyces ambofaciens M27245 1529 342 515 388 283 1528 1 59%
Streptomyces bikiniensis X79851 1525 342 512 383 280 1517 8 59%
Streptomyces bluensis X79324 1528 340 516 381 283 1520 8 59%
Streptomyces bottropensis D63868 1531 348 513 383 287 1531 0 59%
Streptomyces brasiliensis X53162 1522 274 425 310 229 1238 284 48%
Streptomyces caelestis X80824 1526 341 513 385 279 1518 8 59%
Streptomyces coelicolor Y00411 1529 346 510 390 282 1528 1 59%
Streptomyces diastaticus X53161 1521 265 405 297 222 1189 332 46%
Streptomyces diastatochromogenes D63867 1531 348 514 382 287 1531 0 59%
Streptomyces espinosus X80826 1526 333 520 401 264 1518 8 60%
Streptomyces eurythermus D63870 1531 346 514 385 286 1531 0 59%
Streptomyces felleus Z76681 1527 331 504 371 269 1475 52 57%
Streptomyces galbus X79325 1525 347 505 373 292 1517 8 58%
Streptomyces glaucescens X79322 1527 343 510 384 282 1519 8 59%
Streptomyces gougerotii Z76687 1527 333 503 372 268 1476 51 57%
Streptomyces griseus X61478 1528 346 511 379 292 1528 0 58%
Streptomyces hygroscopicus X79853 1525 346 507 378 286 1517 8 58%
Streptomyces intermedius Z76686 1525 334 501 371 268 1474 51 57%
Streptomyces lavendulae X53173 1520 266 400 291 226 1183 337 45%
Streptomyces limosus Z76679 1527 331 504 371 269 1475 52 57%
Streptomyces lincolnensis X79854 1527 345 509 380 285 1519 8 58%
Streptomyces macrosporus Z68099 1529 327 515 378 262 1482 47 58%
Streptomyces mashuensis X79323 1526 345 510 382 281 1518 8 58%
Streptomyces megasporus Z68100 1535 317 525 391 255 1488 47 60%
Streptomyces neyagawaensis D63869 1531 345 517 384 285 1531 0 59%
Streptomyces nodosus AF114033 1528 339 517 390 282 1528 0 59%
Streptomyces odorifer Z76682 1527 331 504 371 269 1475 52 57%
Streptomyces ornatus X79326 1525 345 510 374 288 1517 8 58%
Streptomyces pseudogriseolus X80827 1524 342 511 383 280 1516 8 59%
Streptomyces purpureus X53170 1521 270 402 288 225 1185 336 45%
Streptomyces rimosus X62884 1530 340 515 390 284 1529 1 59%
Streptomyces rutgersensis Z76688 1527 333 503 371 269 1476 51 57%
Streptomyces sampsonii D63871 1531 340 519 387 285 1531 0 59%
Streptomyces scabiei D63862 1530 350 513 381 286 1530 0 58%
Streptomyces setonii D63872 1532 347 511 382 292 1532 0 58%
Streptomyces sp. D63866 1530 344 514 382 290 1530 0 59%
Streptomyces subrutilus X80825 1524 348 506 375 287 1516 8 58%
Streptomyces tendae D63873 1530 344 513 391 282 1530 0 59%
Streptomyces thermodiastaticus Z68101 1528 332 505 377 269 1483 45 58%
Streptomyces thermolineatus Z68097 1526 330 507 377 267 1481 45 58%
Streptomyces thermoviolaceus Z68096 1528 332 507 377 267 1483 45 58%
Streptomyces thermovulgaris Z68098 1531 327 514 377 268 1486 45 58%
Synechococcus sp. PCC 6301 X03538 1488 370 476 350 292 1488 0 56%
Synechocystis sp. PCC 6803 D64000 D90916 1489 384 468 335 302 1489 0 54%
Thermomicrobium roseum M34115 1527 295 585 416 226 1522 5 66%
Thermotoga maritima M21774 1562 327 564 430 241 1562 0 64%
Thermus aquaticus L09663 1519 313 531 395 231 1470 49 61%
Thermus thermophilus X07998 1518 310 544 425 236 1515 3 64%
Treponema pallidum (rRNA A) AE001204 1549 375 517 336 321 1549 0 55%
Tropheryma whipplei X99636 1522 358 503 365 296 1522 0 57%
Ureaplasma urealyticum AE002112 1545 450 408 292 395 1545 0 45%
Vibrio cholerae X76337 1544 392 485 341 318 1536 8 53%
Vibrio parahaemolyticus X56580 1546 379 466 326 308 1479 67 51%
Xanthomonas albilineans X95918 1545 375 481 344 298 1498 47 53%
Xanthomonas campestris NPA 1547 369 475 340 300 1484 63 53%
Xylella fastidiosa AE003861 1545 385 495 337 328 1545 0 54%
Yersinia pestis L37604 1542 371 465 332 299 1467 75 52%
Yersinia pseudotuberculosis Z21939 1543 372 468 334 303 1477 66 52%
Eukaryotic Chloroplast
Apodanthes sp NPA 1502 379 464 328 331 1502 0 53%
Astasia longa X14386 1520 469 382 234 435 1520 0 41%
Babesia bovis U06105 1486 562 240 160 486 1448 38 27%
Chlamydomonas humicola AF374186 1496 365 389 287 284 1325 171 45%
Chlamydomonas reinhardtii J01395 1474 382 451 334 307 1474 0 53%
Chlorella vulgaris AB001684 1494 395 457 331 308 1491 3 53%
Corethron criophilum NPA 1477 410 422 301 344 1477 0 49%
Cryptomonas sp. X56805 1493 414 432 311 336 1493 0 50%
Cyanidium caldarium X52985 1492 420 422 300 350 1492 0 48%
Cyanophora paradoxa X81840 1506 396 460 329 319 1504 2 52%
Cynomorium coccineum U67743 1480 397 441 329 313 1480 0 52%
Cytinus ruber U47845 1497 418 427 321 331 1497 0 50%
Emiliania huxleyi X82156 1483 395 431 319 338 1483 0 51%
Euglena gracilis X12890 V00159 1491 425 421 281 364 1491 0 47%
Glaucocystis nostochinearum X82496 1519 394 466 326 326 1512 7 52%
Gloeochaete wittrockiana X82495 1519 416 442 303 351 1512 7 49%
Heterosigma akashiwo M82860 1537 434 421 304 378 1537 0 47%
Hydnora africana U67745 1504 487 372 277 368 1504 0 43%
Marchantia polymorpha X04465 1496 380 471 351 294 1496 0 55%
Mitrastema yamamotoi U67742 1465 438 391 287 349 1465 0 46%
Nicotiana tabacum V00165 1486 363 483 358 282 1486 0 57%
Palmaria palmata Z18289 1486 397 436 336 317 1486 0 52%
Pilostyles thurberi U67741 1531 484 290 195 495 1464 67 32%
Plasmodium falciparum (plastid-like) X57167 X95275 1426 586 198 138 504 1426 0 24%
Plasmodium vivax AF040974 1447 396 130 103 320 949 498 16%
Polytoma obtusum AF374187 1503 409 356 254 310 1329 174 41%
Polytoma oviforme AF374188 1485 384 372 264 291 1311 174 43%
Polytoma uvella AF374189 1589 490 411 290 395 1586 3 44%
Pylaiella littoralis X14873 1505 437 413 291 364 1505 0 47%
Ricinus communis L37580 1489 349 466 342 266 1423 66 54%
Skeletonema pseudocostatum X82155 1486 417 414 298 356 1485 1 48%
Toxoplasma gondii U87145 1500 523 316 216 445 1500 0 35%
Zea mays Z00028 1490 375 476 356 283 1490 0 56%
Eukaryotic Mitochondrion
Acanthamoeba castellanii U03732 1560 500 358 226 476 1560 0 37%
Afrixalus fornasini NPA 931 315 171 203 215 904 27 40%
Albinaria caerulea X83390 759 295 117 98 249 759 0 28%
Alligator mississippiensis L28074 939 319 191 251 178 939 0 47%
Amblysomus hottentotus M95108 952 347 161 187 257 952 0 37%
Anas platyrhynchos L16770 985 312 207 279 187 985 0 49%
Anopheles gambiae L20934 800 302 103 60 335 800 0 20%
Anopheles quadrimaculatus L04272 794 309 96 59 330 794 0 20%
Antilocapra americana M55540 958 343 178 218 219 958 0 41%
Apis mellifera L06178 S51650 786 329 100 46 311 786 0 19%
Artemia franciscana X69067 712 228 153 122 209 712 0 39%
Ascaris suum X54253 701 224 133 64 280 701 0 28%
Aspergillus nidulans J01393 1437 500 299 209 429 1437 0 35%
Asterina pectinifera D16387 950 345 168 220 217 950 0 41%
Balaenoptera musculus X72204 972 348 180 229 215 972 0 42%
Bos taurus J01394 V00654 955 351 172 216 216 955 0 41%
Bufo boreas boreas Thesis, Goebel A. 932 287 181 222 221 911 21 43%
Bufo peltocephalus Thesis, Goebel A. 936 300 177 212 227 916 20 42%
Caenorhabditis elegans X54252 697 250 115 68 264 697 0 26%
Cafeteria roenbergensis AF193903 1662 561 366 219 516 1662 0 35%
Ceratophrys sp. Thesis, Goebel A. 936 306 181 223 198 908 28 43%
Chlamydomonas eugametos AF008237 1257 439 269 195 354 1257 0 37%
Chlamydomonas reinhardtii X54860 1200 343 310 252 295 1200 0 47%
Chondrus crispus Z30950 Z47547 1376 500 269 184 423 1376 0 33%
Chorthippus parallelus ESC X95574 794 247 133 80 334 794 0 27%
Chorthippus parallelus NOR X95575 794 247 133 81 333 794 0 27%
Chrysodidymus synuroideus NPA 1611 538 326 214 528 1606 5 34%
Chrysodidymus synuroideus mg AF222718 1579 526 323 212 518 1579 0 34%
Coscoroba coscoroba S76216 983 312 206 273 192 983 0 49%
Coturnix coturnix X57245 971 330 179 263 199 971 0 46%
Crithidia fasciculata X02548 612 237 67 49 259 612 0 19%
Crossostoma lacustre M91245 951 292 222 245 192 951 0 49%
Cygnus melancoryphus S76217 989 309 208 277 195 989 0 49%
Cyprinus carpio X61010 951 309 204 256 182 951 0 48%
Damaliscus pygargus M86499 953 340 180 230 203 953 0 43%
Daphnia pulex Z15015 751 258 151 97 245 751 0 33%
Dictyostelium discoideum D16466 1551 573 366 218 394 1551 0 38%
Didelphis virginiana Z29573 951 365 157 188 241 951 0 36%
Drosophila teissieri X54011 790 319 103 61 307 790 0 21%
Drosophila virilis X05914 784 309 108 60 307 784 0 21%
Drosophila yakuba X03240 789 319 103 60 307 789 0 21%
Eleutherodactylus coqui NPA 946 298 159 218 200 875 71 40%
Equus caballus X79547 975 358 172 235 210 975 0 42%
Farfantepenaeus notialis X84357 858 304 176 105 273 858 0 33%
Felis catus U20753 960 347 172 227 214 960 0 42%
Gallus gallus X52392 976 316 178 282 200 976 0 47%
Glycine max M16859 1990 501 610 453 426 1990 0 53%
Harpactes ardens U94810 979 306 190 259 202 957 22 46%
Harpochytrium sp. JEL94 AY182005 1368 438 314 243 373 1368 0 41%
Herpetomonas megaseliae U01006 547 219 58 45 225 547 0 19%
Homo sapiens J01415 954 315 181 253 205 954 0 45%
Katharina tunicata U09810 882 343 118 123 297 881 1 27%
Latimeria chalumnae Z21921 975 351 187 262 175 975 0 46%
Leishmania tarentolae M10126 670 253 69 52 296 670 0 18%
Locusta migratoria X80245 827 251 123 76 377 827 0 24%
Loxodonta africana U60182 D50847 961 330 183 220 228 961 0 42%
Lumbricus terrestris U24570 785 275 147 170 193 785 0 40%
Lutreolina crassicaudata U33494 953 349 164 194 246 953 0 38%
Macropus giganteus X86941 952 352 176 213 211 952 0 41%
Magicicada tredecim NPA 750 267 111 66 283 727 23 24%
Marchantia polymorpha M68292 1974 555 528 420 471 1974 0 48%
Metridium senile S75445 1138 349 301 196 292 1138 0 44%
Monosiga brevicollis AF538053 1596 602 283 180 531 1596 0 29%
Mus musculus J01420 956 361 154 188 253 956 0 36%
Muscardinus avellanarius X84384 956 334 170 202 250 956 0 39%
Mytilus edulis M83756 945 309 214 125 297 945 0 36%
Nephroselmis olivacea AF110138 1509 434 412 299 364 1509 0 47%
Neurospora crassa L33367 1876 615 409 292 556 1872 4 37%
Ochromonas danica AF287134 1563 492 362 215 494 1563 0 37%
Oenothera berteriana X61277 1900 478 588 440 394 1900 0 54%
Oncorhynchus mykiss L29771 944 285 215 259 185 944 0 50%
Ornithorhynchus anatinus U33498 X83427 944 344 168 210 222 944 0 40%
Pan troglodytes D38113 949 315 179 244 211 949 0 45%
Paracentrotus lividus J04815 878 323 168 194 193 878 0 41%
Paramecium tetraurelia K01751 1677 559 347 272 497 1675 2 37%
Pedinomonas minor AF116775 1178 448 162 113 455 1178 0 23%
Penicillium chrysogenum Z23072 1449 503 298 212 436 1449 0 35%
Petromyzon marinus U11880 900 301 168 234 197 900 0 45%
Phalanger orientalis U33496 950 363 161 219 207 950 0 40%
Phascogale tapoatafa U33497 957 311 208 205 233 957 0 43%
Phoca vitulina X63726 961 355 166 229 211 961 0 41%
Physarum polycephalum X75592 1861 558 418 324 561 1861 0 40%
Phytophthora infestans U17009 1503 521 321 214 447 1503 0 36%
Pichia canadensis D49702 D31785 1537 672 207 144 514 1537 0 23%
Podospora anserina X14734 1779 579 376 276 548 1779 0 37%
Porphyra purpurea AF114794 1407 479 309 241 378 1407 0 39%
Protopterus dolloi L42813 933 297 195 234 207 933 0 46%
Prototheca wickerhamii X15435 1675 541 379 266 489 1675 0 39%
Puma concolor U33495 960 347 173 232 208 960 0 42%
Pylaiella littoralis X14874 1519 457 398 258 406 1519 0 43%
Rana catesbeiana X12841 937 291 187 219 240 937 0 43%
Rattus norvegicus J01438 953 345 164 204 240 953 0 39%
Reclinomonas americana AF007261 1595 480 403 285 427 1595 0 43%
Rhizopus stolonifer NPA 1431 449 359 264 358 1430 1 44%
Rhodomonas salina AF288090 1483 546 259 175 503 1483 0 29%
Saccharomyces cerevisiae V00704 1686 707 222 157 600 1686 0 22%
Salmo salar U12143 948 290 211 257 188 946 2 49%
Sceloporus undulatus L28075 947 354 165 235 192 946 1 42%
Schizosaccharomyces pombe X15738 1398 479 278 193 448 1398 0 34%
Scyliorhinus canicula Y16067 960 308 190 225 237 960 0 43%
Secale cereale Z14059 1977 501 604 464 408 1977 0 54%
Sphenodon punctatus L28076 904 328 172 219 185 904 0 43%
Spizellomyces punctatus AF404303 1213 376 276 229 332 1213 0 42%
Stenella coeruleoalba X78169 974 351 179 225 219 974 0 41%
Suillus sinuspaulianus L47584 1987 736 348 245 658 1987 0 30%
Tetrahymena pyriformis M12714 1669 612 300 212 545 1669 0 31%
Trachemys scripta L28077 966 358 167 233 208 966 0 41%
Triticum aestivum Z14078 1957 500 595 455 407 1957 0 54%
Trypanosoma brucei X02547 621 253 69 36 263 621 0 17%
Williopsis saturnus var. mrakii X71392 1614 644 228 150 588 1610 4 23%
Xenopus laevis M27605 945 303 183 246 213 945 0 45%
Zea mays X00794 1962 491 602 463 406 1962 0 54%
Eukaryotic Nuclear
Acanthamoeba castellanii U07413 2290 528 653 542 567 2290 0 52%
Agmasoma penaei NPA 1284 358 270 171 312 1111 173 34%
Ahnfeltia plicata Z14139 1765 418 531 393 423 1765 0 52%
Alexandrium fundyense U09048 1801 498 451 315 533 1797 4 43%
Amblyospora sp. U68474 1394 355 399 259 335 1348 46 47%
Ameson michaelis L15741 1280 392 335 215 333 1275 5 43%
Androctonus australis X77908 1812 470 491 410 441 1812 0 50%
Antonospora scoticae AF024655 1392 316 527 323 205 1371 21 61%
Artemia salina X01723 1810 454 503 417 436 1810 0 51%
Audouinella dasyae L26181 1772 434 514 375 448 1771 1 50%
Audouinella hermannii AF026040 1771 427 518 387 439 1771 0 51%
Aulacoseira ambigua X85404 1847 483 498 358 505 1844 3 46%
Babesia bigemina X59604 1701 416 440 340 505 1701 0 46%
Bacillidium sp. AF104087 1413 466 325 215 380 1386 27 38%
Balamuthia mandrillaris AF019071 2017 526 541 414 536 2017 0 47%
Balbiania investiens AF132294 1772 417 502 366 430 1715 57 49%
Bangia sp. (Northwest Territories/NWT) AF043355 1830 456 486 383 472 1797 33 47%
Bangiopsis subsimplex AF168627 1792 467 464 374 464 1769 23 47%
Batrachospermum gelatinosum AF026045 1765 425 522 382 436 1765 0 51%
Batrachospermum macrosporum AF026048 1770 428 519 393 430 1770 0 52%
Bonnemaisonia hamifera L26182 1765 422 528 378 436 1764 1 51%
Bostrychia moritziana AF203893 1793 477 482 355 479 1793 0 47%
Candida albicans M60302 1787 482 461 347 497 1787 0 45%
Ceramium rubrum L26183 1778 429 513 377 459 1778 0 50%
Chlorella luteoviridis X73998 1800 447 499 409 445 1800 0 50%
Chondrus crispus Z14140 1778 437 521 369 451 1778 0 50%
Compsopogon coeruleus AF087124 1802 438 481 340 469 1728 74 46%
Corallina officinalis L26184 1786 458 501 370 457 1786 0 49%
Crossodonthina koreana Z36893 1811 466 484 372 489 1811 0 47%
Cryptocercus punctulatus NPA 2016 466 572 513 465 2016 0 54%
Cryptococcus neoformans var. neoformans L05428 1802 469 488 374 471 1802 0 48%
Culicosporella lunata AF027683 1343 415 349 241 338 1343 0 44%
Cyanophora paradoxa X68483 1807 488 462 355 502 1807 0 45%
Cymatosira belgica X85387 2317 614 545 482 675 2316 1 44%
Cyrtohymena citrina AF164135 1772 479 454 349 490 1772 0 45%
Dixonielloa grisea L26187 1793 499 493 311 486 1789 4 45%
Drosophila melanogaster M21017 1995 563 473 375 584 1995 0 43%
Echinococcus granulosus U27015 2394 493 764 541 596 2394 0 55%
Edhazardia aedis AF027684 1483 392 432 251 373 1448 35 46%
Encephalitozoon cuniculi X98467 1295 296 446 230 323 1295 0 52%
Encephalitozoon hellem AF118143 1314 321 422 208 363 1314 0 48%
Encephalitozoon sp. L16867 1295 318 441 222 314 1295 0 51%
Endoreticulatus schubergi L39109 1252 359 399 240 254 1252 0 51%
Engelmanniella mobilis AF164134 1773 479 454 351 489 1773 0 45%
Enterocytozoonidae gen. sp. AF201911 1318 368 374 245 313 1300 18 47%
Erythrotrichia carnea L26189 1796 465 472 367 491 1795 1 47%
Euglypha rotunda X77692 1811 484 457 364 506 1811 0 45%
Euplotes aediculatus M14590 1882 508 462 374 538 1882 0 44%
Flabelliforma montana AJ252962 1383 279 366 241 229 1115 268 44%
Fragaria x ananassa X15590 1804 451 491 398 464 1804 0 49%
Gastrostyla steinei AF164133 1771 481 449 344 497 1771 0 45%
Gelidium vagum L26190 1769 426 517 379 447 1769 0 51%
Genicularia spirotaenia NPA 1803 478 466 366 493 1803 0 46%
Giardia ardeae Z17210 1435 240 548 474 173 1435 0 71%
Giardia intestinalis X52949 1452 228 553 532 139 1452 0 75%
Giardia muris X65063 1432 350 501 345 236 1432 0 59%
Glaucocystis nostochinearum X70803 1819 481 467 361 510 1819 0 46%
Gloeochaete wittrockiana X81901 1801 459 481 371 490 1801 0 47%
Glomus intraradices X58725 1800 482 438 322 497 1739 61 42%
Glugea atherinae U15987 1357 384 428 259 264 1335 22 51%
Glugea stephani AF056015 1314 343 377 224 221 1165 149 46%
Gracilariopsis sp. M33639 1782 443 515 372 452 1782 0 50%
Halymenia plana U33133 1770 434 512 371 453 1770 0 50%
Hexamita sp. Z17224 1550 391 449 348 362 1550 0 51%
Hildenbrandia rubra L19345 1781 447 524 365 444 1780 1 50%
Homo sapiens K03432 1870 419 549 500 402 1870 0 56%
Ichthyosporidium sp. L39110 1360 386 418 270 278 1352 8 51%
Janacekia debaisieuxi AJ252950 1417 461 333 219 404 1417 0 39%
Lecanora dispersa NPA 1797 421 444 340 439 1644 153 44%
Lilioceris lilii NPA 1921 461 522 452 447 1882 39 51%
Loma acerinae AJ252951 1352 374 466 277 235 1352 0 55%
Mastigamoeba balamuthi L23799 2741 715 738 547 724 2724 17 47%
Microgemma sp. AJ252952 1356 404 419 247 278 1348 8 49%
Microsporidium 57864 U90885 1245 403 286 172 384 1245 0 37%
Mus musculus X00686 1869 417 550 497 405 1869 0 56%
Mytilus edulis L24489 1826 456 500 418 452 1826 0 50%
Naegleria gruberi Thesis, Mullican J. 2019 516 537 427 539 2019 0 48%
Nemalion helminthoides L26196 1770 437 508 379 445 1769 1 50%
Nemalionopsis shawii AF506272 1793 428 496 368 444 1736 57 48%
Nosema algerae AF069063 1390 378 395 256 361 1390 0 47%
Nosema apis U97150 1242 387 297 183 375 1242 0 39%
Nosema necatrix U11051 1247 405 291 171 380 1247 0 37%
Okanagana utahensis U06478 1918 467 535 471 444 1917 1 52%
Onychodromus quadricornutus X53485 1771 481 451 342 496 1770 1 45%
Ophiopholis aculeata L28056 1801 457 495 410 439 1801 0 50%
Oxytricha granulifera AF164122 1774 486 447 347 494 1774 0 45%
Oxytricha longa AF164125 1770 472 456 350 492 1770 0 46%
Palmaria palmata Z14142 1771 428 518 385 440 1771 0 51%
Paraurostyla weissei AF164127 1771 482 450 355 484 1771 0 45%
Paruroleptus lepisma AF164132 1772 483 456 343 490 1772 0 45%
Paulinella chromatophora X81811 1817 466 483 382 484 1815 2 48%
Placopecten magellanicus X53899 1815 457 488 407 463 1815 0 49%
Plasmodium falciparum (A gene) M19172 2090 645 420 324 701 2090 0 36%
Plasmodium falciparum (S gene) M19173 2145 706 413 296 730 2145 0 33%
Plasmodium vivax (A gene) U07367 2063 614 441 350 658 2063 0 38%
Plasmodium vivax (O gene) U93095 2230 656 504 393 676 2229 1 40%
Plasmodium vivax (S gene) U07368 2147 646 464 361 676 2147 0 38%
Pleistophora hippoglossoideos AJ252953 1372 383 453 270 266 1372 0 53%
Pleistophora sp. U10342 1254 351 394 235 252 1232 22 50%
Pleurotricha lanceolota AF164128 1771 483 448 344 496 1771 0 45%
Plocamiocolax pulvinata U09618 1771 446 504 365 456 1771 0 49%
Polydispyrenia simulii AJ252960 1398 319 410 288 274 1291 107 50%
Porphyra miniata AF175540 1836 451 492 374 484 1801 35 47%
Porphyridium aerugineum L27635 1778 449 495 351 467 1762 16 48%
Reticulitermes flavipes NPA 1882 457 517 449 459 1882 0 51%
Rhodella maculata U21217 1784 454 484 352 465 1755 29 47%
Rhodochaete parvula AF139462 1790 459 460 363 476 1758 32 46%
Rhodogorgon carriebowensis AF006089 1841 439 547 391 464 1841 0 51%
Rhodymenia leptophylla U09621 1771 435 510 375 451 1771 0 50%
Saccharomyces cerevisiae U53879 1800 483 459 348 510 1800 0 45%
Spraguea lophii AF033197 1400 422 440 250 286 1398 2 49%
Staurastrum sp. M752 X74752 1803 468 477 372 486 1803 0 47%
Strongylocentrotus purpuratus L28055 1796 438 503 430 425 1796 0 52%
Stylonychia lemnae AF164124 1770 477 453 346 494 1770 0 45%
Stylonychia mytilus AF164123 1771 480 450 348 493 1771 0 45%
Thalassiosira eccentrica X85396 1802 480 461 351 508 1800 2 45%
Thelohania solenopsae AF031538 1410 417 348 229 388 1382 28 41%
Thelohania sp. AF031537 1387 351 289 175 315 1130 257 33%
Thorea hispida AF506273 1867 430 525 362 442 1759 108 48%
Thorea violacea AF026042 1916 467 545 392 512 1916 0 49%
Thorea violacea AF506274 1868 428 523 357 444 1752 116 47%
Toxoplasma gondii (P) X75453 1793 470 458 362 503 1793 0 46%
Trachipleistophora hominis AJ002605 1362 360 478 281 243 1362 0 56%
Tritrichomonas foetus M81842 1571 409 430 331 401 1571 0 48%
Uroleptus gallina AF164130 1775 477 453 354 491 1775 0 45%
Uroleptus pisces AF164131 1772 481 457 350 484 1772 0 46%
Urostyla grandis AF164129 1768 485 442 335 506 1768 0 44%
Vairimorpha necatrix Y00266 M24612 1244 401 293 172 378 1244 0 37%
Vairimorpha sp. Argentina AF031539 1331 334 426 251 241 1252 79 51%
Vavraia culicis AJ252961 1364 357 478 292 237 1364 0 56%
Visvesvaria acridophagus AF024658 1399 417 350 241 391 1399 0 42%
Weiseria palustris AF132544 1402 358 408 289 319 1374 28 50%
Xenopus laevis X04025 1826 433 516 466 411 1826 0 54%
  1. NPA, Not Publically Available - The sequence used for analysis has not been deposited in Genbank.