Last modified on 29 August 2011.

NOTE: This section is under development.

Data Categories:

• Sequence-Level Data
• Alignment-Level Data
• Structure-Level Data
• Gutell Lab Manuscript Links

Sequence-Level Data: [Back to Top]

• FUTURE: sequences
• Current Sequence Metadata
• FUTURE: intron sites

Alignment-Level Data: [Back to Top]

• Sequence Alignments:
  • rRNA Primary Alignments
  • rRNA Seed Alignments
  • Specialized Alignments
  • rCAD Datasets
  • Alignments Used in Specific Analyses
• FUTURE: alignment metadata
• FUTURE: intron sites
• Sequence Conservation Diagrams
• Nucleotide Frequency
• Structural Statistics
• RNA2DMap

Structure-Level Data: [Back to Top]

• Reference Structure Diagrams
• Secondary Structure (Covariation) Model Diagrams:
  • Current 5S rRNA Structures
  • New and Updated Secondary Structure Diagrams
  • Old Secondary Structure Model Diagrams
• rRNA Structure/Basepair Information
• FUTURE: 3D structures
• Structural Statistics
• Comparison of Secondary Structure Model to 3D Structure
• RNA2DMap
• Structure Motif Data

Gutell Lab Manuscript Links: [Back to Top]

• The Accuracy of Ribosomal RNA Comparative Structure Models
• The Lonepair Triloop: A New Motif in RNA Structure
• Diversity of Basepair Conformations and Their Occurrence in rRNA Structure and RNA Structural Motifs
• Evaluation of the suitability of free-energy minimization using nearest-neighbor energy parameters for RNA secondary structure prediction