1A: Mean Frequency of Introns in rRNA Positions

rRNA Total Introns Total Positions Positions with Introns Expanded View
16S 2076 1542 120 16S (Table 1D)
23S 773 2904 103 23S (Table 1D)
16S and 23S 2849 4446 223 16S/23S (Table 1D)

1B: Number of Intron Types per Intron Position

# of Intron Types 16S Positions 23S Positions
1 100 40, 114, 156, 162, 170, 263, 265, 287, 296, 322, 323, 330, 331, 332, 333, 337, 357, 374, 390, 392, 393, 395, 400, 401, 497, 508, 510, 514, 529, 531, 532, 548, 568, 569, 570, 674, 675, 687, 742, 781, 789, 791, 793, 801, 813, 879, 882, 883, 884, 894, 898, 901, 908, 915, 932, 934, 935, 939, 940, 952, 966, 967, 990, 1049, 1050, 1057, 1062, 1068, 1071, 1078, 1082, 1083, 1092, 1101, 1139, 1197, 1201, 1205, 1213, 1214, 1221, 1224, 1226, 1228, 1229, 1231, 1363, 1367, 1384, 1391, 1403, 1408, 1502, 1507, 1508, 1510, 1511, 1512, 1514, 1516 84 0, 323, 471, 569, 575, 580, 674, 677, 678, 681, 704, 711, 767, 775, 776, 777, 780, 782, 783, 784, 786, 796, 800, 801, 824, 829, 830, 858, 898, 978, 1024, 1025, 1054, 1066, 1085, 1090, 1091, 1092, 1093, 1094, 1098, 1100, 1102, 1255, 1685, 1766, 1773, 1787, 1809, 1849, 1898, 1903, 1911, 1915, 1917, 1925, 1926, 1927, 1929, 1939, 1951, 1952, 2059, 2066, 2067, 2069, 2076, 2256, 2262, 2409, 2445, 2451, 2455, 2499, 2504, 2509, 2533, 2534, 2552, 2571, 2586, 2593, 2601, 2610
2 12 297, 298, 299, 300, 891, 896, 911, 989, 1046, 1052, 1210, 1389 10 730, 787, 798, 1699, 1921, 1943, 1974, 2563, 2585, 2596
3 5 0, 651, 956, 1199, 1506 4 779, 958, 1065, 1931
4 3 516, 788, 943 3 1923, 1949, 2584
5 0   2 2449, 2500

1C: Number of Introns Identified for each Intron Position

# of Introns 16S rRNA 23S rRNA
# of Positions Position Numbers Total # of Introns PP1 EP2 # of Positions Position Numbers Total # of Introns PP1 EP2
1 44 170, 263, 322, 332, 333, 337, 392, 395, 400, 514, 529, 531, 532, 548, 568, 570, 675, 687, 789, 801, 879, 882, 884, 898, 915, 932, 966, 990, 1050, 1057, 1078, 1082, 1092, 1201, 1221, 1224, 1228, 1231, 1363, 1391, 1403, 1408, 1508, 1510 44 0.000e+0 0.0 38 0, 569, 580, 674, 677, 681, 767, 780, 782, 786, 796, 801, 824, 829, 830, 1024, 1066, 1091, 1100, 1685, 1766, 1773, 1849, 1898, 1911, 1915, 1939, 2067, 2069, 2076, 2256, 2445, 2499, 2533, 2534, 2552, 2571, 2610 38 0.000e+0 0.0
2 20 162, 296, 357, 401, 510, 569, 791, 813, 896, 901, 911, 935, 1062, 1083, 1101, 1214, 1226, 1367, 1384, 1502 40 0.000e+0 0.0 14 471, 575, 787, 858, 898, 1093, 1098, 1102, 1929, 1974, 2451, 2455, 2585, 2601 28 0.000e+0 0.0
3 5 40, 374, 508, 742, 967 15 0.000e+0 0.0 11 704, 711, 730, 775, 958, 978, 1092, 1903, 1943, 2509, 2586 33 0.000e+0 0.0
4 8 298, 300, 323, 781, 894, 952, 1139, 1514 32 0.000e+0 0.0 5 1255, 1787, 1952, 2059, 2584 20 0.000e+0 0.0
5 3 390, 1071, 1511 15 0.000e+0 0.0 6 323, 783, 1054, 1699, 1926, 2409 30 0.000e+0 0.0
6 3 674, 891, 1052 18 0.000e+0 0.0 3 1065, 1809, 2066 18 0.000e+0 0.0
7 6 265, 297, 651, 1049, 1205, 1213 42 0.000e+0 0.0 5 776, 777, 784, 2262, 2504 35 0.000e+0 0.0
8 3 156, 883, 934 24 0.000e+0 0.0 2 1917, 2596 16 0.000e+0 0.0
9 4 331, 793, 1068, 1197 36 0.000e+0 0.0 3 1085, 1925, 1927 27 0.000e+0 0.0
10 3 497, 956, 1507 30 0.000e+0 0.0 0   0 0 0
11 0   0 0 0 2 1951, 2563 22 0.000e+0 0.0
13 1 908 13 0.000e+0 0.0 1 1949 13 0.000e+0 0.0
14 2 114, 287 28 0.000e+0 0.0 1 779 14 0.000e+0 0.0
15 1 0 15 0.000e+0 0.0 0   0 0 0
16 1 939 16 0.000e+0 0.0 0   0 0 0
17 0   0 0 0 1 1923 17 0.000e+0 0.0
18 0   0 0 0 1 800 18 0.000e+0 0.0
19 2 299, 393 38 0.000e+0 0.0 1 1921 19 0.000e+0 0.0
20 1 1389 20 0.000e+0 0.0 0   0 0 0
25 1 1046 25 0.000e+0 0.0 0   0 0 0
27 1 1229 27 0.000e+0 0.0 0   0 0 0
28 1 940 28 0.000e+0 0.0 0   0 0 0
29 0   0 0 0 1 1094 29 0.000e+0 0.0
31 2 330, 989 62 0.000e+0 0.0 1 2593 31 0.000e+0 0.0
32 0   0 0 0 1 1025 32 0.000e+0 0.0
34 0   0 0 0 2 678, 1090 68 0.000e+0 0.0
36 1 1210 36 0.000e+0 0.0 0   0 0 0
45 0   0 0 0 1 1931 45 0.000e+0 0.0
48 0   0 0 0 1 2500 48 0.000e+0 0.0
61 0   0 0 0 1 2449 61 0.000e+0 0.0
78 1 1512 78 0.000e+0 0.0 0   0 0 0
90 1 788 90 0.000e+0 0.0 0   0 0 0
111 0   0 0 0 1 798 111 0.000e+0 0.0
121 1 1199 121 0.000e+0 0.0 0   0 0 0
222 1 1516 222 0 0 0   0 0 0
272 1 516 272 0 0 0   0 0 0
335 1 943 335 0 0 0   0 0 0
354 1 1506 354 0 0 0   0 0 0

 

  1. Poisson Probability (PP): Poisson Probability Function (or) Poisson Probability Function (for X <= 170; PP = 0 for X > 170)
  2. Expected Number of Positions (EP) = Poisson Probability x # of Positions in the rRNA Molecule