Letter Codes for Conservation Categories: A, C, G, U, N, nucleotide is conserved in 98-100% of the sequences in the alignment (corresponds to uppercase nucleotides in conservation diagrams); a, c, g, u, n, nucleotides is conserved in 90-100% of the sequences in the alignment (corresponds to lowercase nucleotides in conservation diagrams); o, nucleotide is conserved in 80-90% of the sequences in the alignment (corresponds to closed circles in conservation diagrams); w, nucleotide is conserved in less than 80% of the sequences in the alignment (corresponds to open circles in conservation diagrams); x, position is conserved in less than 95% of the sequences in the alignment (corresponds to arcs in conservation diagrams).
E. coli
(J01695)		 C. elegans (mito)
(X54252)		 Conservation (1 Col)
3 T
Aa   109 / 48 56 / 49
Cc   46 / 50 19 / 35
Gg   79 / 81 27 / 55
Uu   52 / 42 20 / 36
Nnowx   286 / 221 / 162 / 461 / 412 122 / 175 / 191 / 366 / 688
Tot   1542 1542
----- 1 U --- ---
----- 2 A --- ---
----- 3 A --- ---
----- 4 A --- ---
----- 5 G --- ---
----- 6 U --- ---
----- 7 U --- ---
----- 8 U --- ---
----- 9 U --- ---
----- 10 C --- ---
----- 11 U --- ---
----- 12 U --- ---
----- 13 U --- ---
----- 14 C --- ---
----- 15 A --- ---
1 A 16 G x x
2 A 17 G x x
3 A 18 G x x
4 U 19 A x x
5 U 20 A x x
6 G 21 U x x
7 A 22 U w w
8 A 23 A w w
9 G 24 A w w
10 A 25 A w w
11 G 26 A G g
12 U 27 U w w
13 U 28 U U u
14 U 29 U u u
15 G 30 G G g
16 A 31 A A o
17 U 32 U U U
18 C 33 C c c
19 A 34 A o o
20 U 35 U u u
21 G 36 G G g
22 G 37 G w w
23 C 38 U C c
24 U 39 U w w
25 C 40 U w w
26 A 41 A w w
27 G 42 A w w
28 A 43 G w w
29 U 44 A w w
30 U 45 U w w
31 G ----- x x
32 A 46 G w w
33 A 47 A a o
34 C 48 U w w
35 G 49 U G g
36 C 50 U c o
37 U 51 A U u
38 G ----- w w
39 G 52 A g o
40 C 53 A w w
41 G 54 A w w
42 G 55 U w w
43 C 56 G o w
44 A 57 G w w
45 G 58 U w w
46 G 59 A o w
47 C 60 U w w
48 C 61 U w w
----- 62 A --- ---
----- 63 U --- ---
49 U 64 C U u
50 A 65 U o o
51 A ----- A x
52 C ----- w w
53 A ----- w w
54 C ----- C C
55 A ----- A A
56 U ----- U U
57 G ----- G G
58 C ----- C c
59 A ----- a a
60 A ----- o o
61 G ----- G g
62 U ----- u u
63 C ----- c x
64 G ----- w x
65 A ----- o x
66 A ----- w x
67 C ----- w x
68 G ----- o x
69 G ----- x x
70 U ----- x x
71 A ----- x x
72 A ----- x x
73 C ----- x x
74 A ----- x x
75 G ----- x x
76 G ----- x x
77 A ----- x x
78 A ----- x x
79 G ----- x x
80 A ----- x x
81 A ----- x x
82 G ----- x x
----- 66 A --- ---
83 C 67 A x x
84 U 68 A x x
85 U 69 U x x
86 G 70 U x x
87 C ----- x x
88 U ----- x x
89 U ----- x x
90 C ----- x x
91 U ----- x x
92 U ----- x x
93 U ----- x x
94 G ----- x x
95 C ----- x x
96 U ----- x x
97 G ----- x x
98 A ----- x x
99 C ----- x x
100 G ----- x x
101 A ----- a x
102 G ----- w x
103 U ----- w x
104 G ----- x x
105 G ----- g g
106 C ----- c c
107 G ----- o o
108 G ----- w w
109 A ----- A a
110 C ----- o o
111 G ----- g o
112 G ----- G g
113 G ----- w o
114 U ----- u u
115 G ----- w o
116 A ----- a o
117 G ----- o o
118 U ----- u o
119 A ----- A a
120 A ----- a x
121 U ----- w w
122 G ----- w w
123 U ----- c c
124 C ----- w w
125 U ----- o w
126 G ----- w w
127 G ----- w w
128 G ----- w w
129 A ----- w w
130 A ----- o o
131 A ----- w w
132 C ----- w w
133 U ----- u x
134 G ----- w x
135 C ----- w x
136 C ----- o x
137 U ----- w x
138 G ----- w x
139 A ----- w x
140 U ----- w x
141 G ----- w x
142 G ----- w x
143 A ----- w x
144 G ----- w x
145 G ----- w x
146 G ----- w x
147 G ----- g x
148 G ----- w x
149 A ----- A x
150 U ----- o x
151 A ----- A x
152 A ----- o x
153 C ----- o x
154 U ----- w x
155 A ----- w x
156 C ----- w x
157 U ----- w x
158 G ----- w x
159 G ----- o x
160 A ----- A x
161 A ----- o x
162 A ----- o x
163 C ----- w x
164 G ----- w x
165 G ----- w x
166 U ----- w x
167 A ----- w x
168 G ----- w x
169 C ----- o x
170 U ----- u x
171 A ----- A x
172 A ----- A x
173 U ----- u x
174 A ----- a x
175 C ----- c x
176 C ----- w x
177 G ----- w x
178 C ----- w x
179 A ----- x x
180 U ----- x x
181 A ----- x x
182 A ----- x x
183 C ----- x x
184 G ----- x x
185 U ----- x x
186 C ----- x x
187 G ----- x x
188 C ----- x x
189 A ----- x x
190 A ----- x x
191 G ----- x x
192 A ----- x x
193 C ----- x x
194 C ----- x x
195 A ----- x x
196 A ----- x x
197 A ----- x x
198 G ----- x x
199 A ----- x x
200 G ----- x x
201 G ----- x x
202 G ----- x x
203 G ----- x x
204 G ----- x x
205 A ----- x x
206 C ----- x x
207 C ----- x x
208 U ----- x x
209 U ----- x x
210 C ----- x x
211 G ----- x x
212 G ----- x x
213 G ----- x x
214 C ----- x x
215 C ----- x x
216 U ----- x x
217 C ----- x x
218 U ----- x x
219 U ----- x x
220 G ----- x x
221 C ----- w x
222 C ----- w x
223 A ----- w x
224 U ----- w x
225 C ----- w x
226 G ----- w x
227 G ----- o o
228 A ----- o x
229 U ----- w x
230 G ----- w w
231 U ----- w w
232 G ----- w w
233 C ----- w w
234 C ----- w w
235 C ----- w w
236 A ----- w w
237 G ----- w w
238 A ----- g g
239 U ----- w w
240 G ----- w w
241 G ----- w w
242 G ----- w w
243 A ----- A a
244 U ----- U u
245 U ----- w w
246 A ----- A A
247 G ----- o o
248 C ----- o w
249 U ----- u o
250 A ----- w w
251 G ----- G o
252 U ----- o w
253 A ----- u o
254 G ----- G x
255 G ----- g x
256 U ----- u x
257 G ----- w x
258 G ----- w x
259 G ----- g x
260 G ----- g o
261 U ----- u u
262 A ----- a o
263 A ----- o w
264 C ----- w x
265 G ----- o x
266 G ----- g x
267 C ----- c x
268 U ----- w x
269 C ----- w x
270 A ----- a x
271 C ----- c x
272 C ----- C x
273 U ----- a o
274 A ----- o w
275 G ----- g g
276 G ----- o w
277 C ----- o o
278 G ----- w w
279 A ----- w w
280 C ----- w w
281 G ----- o o
282 A ----- A A
283 U ----- w w
284 C ----- w w
285 C ----- w w
286 C ----- w w
287 U ----- U u
288 A ----- A a
289 G ----- w w
290 C ----- w w
291 U ----- w x
292 G ----- g x
293 G ----- w x
294 U ----- w x
295 C ----- w x
296 U ----- U x
297 G ----- o x
298 A ----- a o
299 G ----- G o
300 A ----- o o
301 G ----- G x
302 G ----- w x
303 A ----- w x
304 U ----- w x
305 G ----- g x
306 A ----- o x
307 C ----- w x
308 C ----- o x
309 A ----- w x
310 G ----- w w
311 C ----- w w
312 C ----- w o
313 A ----- A a
314 C ----- w o
315 A ----- A a
316 C ----- w x
317 U ----- w x
318 G ----- G x
319 G ----- o x
320 A ----- w x
321 A ----- o x
322 C ----- c x
323 U ----- U x
324 G ----- G x
325 A ----- a x
326 G ----- g x
327 A ----- A x
328 C ----- w x
329 A ----- A x
330 C ----- c x
331 G ----- g x
332 G ----- g x
333 U ----- w x
334 C ----- o x
335 C ----- o x
336 A ----- w x
337 G ----- w x
338 A ----- a x
339 C ----- c c
340 U ----- o w
341 C ----- o o
342 C ----- c c
343 U ----- o w
344 A ----- A a
345 C ----- o o
346 G ----- G g
347 G ----- G g
348 G ----- o o
349 A ----- a o
350 G ----- g o
351 G ----- G o
352 C ----- C C
353 A ----- a a
354 G ----- g g
355 C ----- C C
356 A ----- A A
357 G ----- G G
358 U ----- w w
359 G ----- w w
360 G ----- g o
361 G ----- w w
362 G ----- G o
363 A ----- o o
364 A ----- A A
365 U 71 U o w
366 A 72 G w w
367 U 73 A u u
368 U 74 U U U
369 G 75 U w w
370 C 76 U w w
371 A 77 A w w
372 C 78 C C c
373 A 79 A A a
374 A 80 G a a
375 U 81 A U U
376 G 82 G o w
377 G 83 U w w
378 G 84 A w w
379 C 85 G w w
380 G 86 G x x
381 C 87 C w w
382 A 88 A o o
383 A 89 A a a
384 G 90 U w w
385 C 91 A w w
386 C 92 A w w
387 U 93 A o o
388 G 94 A g g
389 A 95 A A A
390 U 96 U w w
391 G 97 U w w
392 C 98 U w w
393 A 99 A a a
394 G 100 C G g
395 C 101 C o w
396 C 102 U w w
397 A 103 C A a
398 U 104 G w w
399 G 105 G w w
400 C 106 C o w
401 C 107 A w w
402 G 108 A o w
403 C 109 U w w
----- 110 U --- ---
404 G 111 U o x
405 U 112 A U x
406 G 113 U x x
407 U 114 C x x
408 A ----- x x
409 U ----- x x
410 G ----- x x
411 A ----- x x
412 A ----- x x
413 G ----- x x
414 A ----- x x
415 A ----- x x
416 G ----- x x
417 G ----- x x
418 C ----- x x
419 C ----- x x
420 U ----- x x
421 U ----- x x
422 C ----- x x
423 G ----- x x
424 G ----- x x
425 G ----- x x
426 U ----- x x
427 U ----- x x
428 G ----- x x
429 U ----- x x
430 A ----- x x
431 A ----- x x
432 A ----- x x
433 G ----- x x
434 U ----- x x
435 A ----- x x
436 C ----- x x
437 U ----- x x
438 U ----- x x
439 U ----- x x
440 C ----- x x
441 A ----- x x
442 G ----- x x
443 C ----- x x
444 G ----- x x
445 G ----- x x
446 G ----- x x
447 G ----- x x
448 A ----- x x
449 G ----- x x
450 G ----- x x
451 A ----- x x
452 A ----- x x
453 G ----- x x
454 G ----- x x
455 G ----- x x
456 A ----- x x
457 G ----- x x
458 U ----- x x
459 A ----- x x
460 A ----- x x
461 A ----- x x
462 G ----- x x
463 U ----- x x
464 U ----- x x
465 A ----- x x
466 A ----- x x
467 U ----- x x
468 A ----- x x
469 C ----- x x
470 C ----- x x
471 U ----- x x
472 U ----- x x
473 U ----- x x
474 G ----- x x
475 C ----- x x
476 U ----- x x
477 C ----- x x
478 A ----- x x
479 U ----- x x
480 U ----- x x
481 G ----- x x
482 A ----- x x
483 C ----- x x
484 G ----- x x
485 U ----- x x
486 U ----- x x
487 A ----- x x
488 C ----- x x
489 C ----- x x
490 C ----- x x
491 G ----- x x
492 C ----- x x
493 A ----- x x
494 G ----- x x
495 A ----- x x
496 A ----- x x
497 G ----- x x
498 A ----- o x
499 A ----- A x
500 G 115 G o o
501 C 116 C w w
502 A 117 U w w
503 C 118 U w w
504 C 119 G w w
505 G 120 U G G
506 G 121 A g g
507 C 122 A C c
508 U 123 A w w
509 A 124 A A A
510 A 125 U w o
511 C 126 A w w
512 U 127 C w w
513 C 128 U w w
514 C 129 U w w
515 G 130 G G G
516 U 131 U U U
517 G 132 U G G
518 C 133 C c c
519 C 134 C C C
520 A 135 A A A
521 G 136 G G G
522 C 137 A C C
523 A 138 A a o
524 G 139 U G g
525 C 140 A C c
526 C 141 A C c
527 G 142 U G G
528 C 143 C C C
529 G 144 G G G
530 G 145 G G G
531 U 146 C U u
532 A 147 U A o
533 A 148 A A A
534 U 149 G u o
535 A 150 A o o
536 C 151 C C C
537 G 152 U w w
538 G 153 U w w
539 A 154 G w w
540 G 155 U x w
541 G 156 U w w
542 G 157 A w w
543 U 158 A w w
----- 159 A --- ---
544 G 160 G w w
545 C 161 C o o
546 A 162 U w w
----- 163 U --- ---
----- 164 G --- ---
547 A 165 U A a
548 G 166 A g g
549 C 167 C c o
550 G 168 U G o
551 U 169 U u o
552 U 170 U o w
553 A 171 A w w
554 A 172 A w w
555 U 173 U w w
556 C 174 U o w
557 G ----- o x
558 G ----- w x
559 A ----- a x
560 A ----- w x
561 U ----- u x
562 U ----- o x
563 A ----- o w
564 C 175 G w w
565 U 176 A U u
566 G 177 U G o
567 G 178 G o o
568 G 179 U o o
569 C 180 U w w
570 G 181 A w w
571 U 182 A U U
572 A 183 U A a
573 A 184 U A a
574 A 185 A A A
575 G 186 U o o
576 C 187 G w w
577 G 188 A g g
578 C 189 A w w
579 A 190 A w w
580 C 191 U o w
581 G 192 U G o
582 C 193 A w w
583 A 194 U A a
----- 195 U --- ---
584 G 196 A G o
585 G 197 U w w
586 C 198 A w w
587 G 199 U g x
588 G ----- x x
589 U ----- x x
590 U ----- x x
591 U ----- x x
592 G ----- x x
593 U ----- x x
594 U ----- x x
595 A ----- x x
596 A ----- x x
597 G ----- x x
598 U ----- x x
599 C ----- x x
600 A ----- x x
601 G ----- x x
602 A ----- x x
603 U ----- x x
604 G ----- x x
605 U ----- x x
606 G ----- x x
607 A ----- x x
608 A ----- x x
609 A ----- x x
610 U ----- x x
611 C ----- x x
612 C ----- x x
613 C ----- x x
614 C ----- x x
615 G ----- x x
616 G ----- x x
617 G ----- x x
618 C ----- x x
619 U ----- x x
620 C ----- x x
621 A ----- x x
622 A ----- x x
623 C ----- x x
624 C ----- x x
625 U ----- x x
626 G ----- x x
627 G ----- x x
628 G ----- x x
629 A ----- x x
630 A ----- x x
631 C ----- x x
632 U ----- x x
633 G ----- x x
634 C ----- x x
635 A ----- x x
636 U ----- x x
637 C ----- x x
638 U ----- x x
639 G ----- x x
640 A ----- x x
641 U ----- x x
642 A ----- x x
643 C ----- x x
644 U ----- x x
645 G ----- x x
646 G ----- x x
647 C ----- x x
648 A ----- x x
649 A ----- x x
650 G ----- x x
651 C ----- x x
652 U ----- x x
653 U ----- x x
654 G ----- x x
655 A ----- w x
656 G ----- g x
657 U ----- w x
658 C ----- w w
659 U ----- w w
660 C ----- w w
661 G ----- o w
662 U ----- w w
663 A ----- w w
664 G ----- g o
665 A ----- w w
666 G ----- g o
667 G ----- g o
668 G ----- w w
669 G ----- w w
670 G ----- w w
671 G ----- w w
672 U ----- w w
673 A 200 U w w
674 G 201 U G o
675 A 202 U w o
676 A 203 C A a
677 U 204 U o o
678 U 205 U u u
679 C 206 U w w
680 C 207 U o w
681 A 208 A w w
682 G 209 G w w
683 G 210 A o w
684 U 211 U w w
685 G 212 C o w
686 U 213 U o x
687 A ----- A a
688 G 214 A g g
689 C 215 U w w
690 G 216 G g o
691 G 217 G G g
692 U 218 U U U
693 G 219 A g o
694 A 220 G a a
695 A 221 A A a
696 A 222 A A A
697 U 223 U U o
698 G 224 U w w
699 C 225 U c c
700 G 226 G w w
701 U ----- w w
702 A ----- o x
703 G ----- g x
704 A ----- A x
705 G 227 G w x
706 A 228 A w w
707 U 229 U o w
708 C 230 U w w
709 U 231 U w w
710 G 232 A o w
711 G ----- w w
712 A ----- a o
713 G ----- w w
714 G ----- G g
715 A ----- A a
716 A ----- w o
717 U 233 U w w
718 A ----- a x
719 C 234 A o w
720 C 235 U c c
721 G 236 U w w
722 G 237 A w w
723 U 238 G w w
724 G 239 U w w
725 G 240 G G o
726 C 241 A c c
727 G 242 A G g
728 A 243 U a a
729 A 244 U A A
730 G 245 U w w
731 G 246 U g g
732 C 247 C C o
733 G 248 A w w
734 G 249 U w w
735 C 250 A w w
736 C ----- w w
737 C ----- w w
738 C ----- w w
739 C ----- c o
740 U ----- o w
741 G ----- w w
742 G ----- g o
743 A ----- w w
744 C ----- w x
745 G ----- w w
746 A ----- w x
747 A ----- w x
748 G ----- w x
749 A ----- w x
750 C ----- w x
751 U ----- w x
752 G ----- o x
753 A ----- o x
754 C ----- o x
755 G ----- w w
756 C ----- w w
757 U ----- U u
758 C ----- w w
759 A ----- A a
760 G ----- w w
----- 251 A --- ---
761 G 252 U g w
762 U 253 U w w
763 G 254 U w w
764 C 255 U c c
765 G 256 A G g
766 A 257 A A A
767 A 258 G A a
768 A 259 A a a
769 G 260 U G g
770 C 261 U w o
771 G 262 U w w
772 U 263 G w w
773 G 264 U g g
774 G 265 U g g
775 G ----- G g
776 G 266 G o w
777 A 267 A a o
778 G 268 A w w
779 C 269 C c o
780 A 270 A w w
781 A 271 A A A
782 A 272 A A o
783 C 273 G w w
784 A 274 C o w
785 G 275 A o o
786 G 276 G G G
787 A 277 A a a
788 U 278 U U U
789 U 279 U o o
790 A 280 A A A
791 G 281 G G G
792 A ----- A A
793 U 282 U u u
794 A 283 A A A
795 C 284 C C C
796 C 285 C C C
797 C 286 U o o
798 U 287 G o w
799 G 288 G w w
800 G 289 U g o
801 U 290 U U U
802 A 291 A A A
803 G 292 G g o
804 U ----- U o
805 C 293 A c c
806 C ----- o o
807 A 294 C w w
808 C 295 A w w
809 G 296 A o o
810 C 297 A C c
811 C 298 A w w
812 G 299 A w w
813 U 300 U U u
814 A ----- A a
815 A ----- A a
816 A ----- A a
817 C ----- C c
818 G ----- g w
819 A ----- o w
820 U ----- U u
821 G ----- g g
822 U ----- w w
823 C ----- w w
824 G ----- w w
825 A ----- w w
826 C ----- c o
827 U ----- u o
828 U ----- w x
829 G ----- o x
830 G ----- w x
831 A ----- w x
832 G ----- o x
833 G ----- o x
834 U ----- w x
835 U ----- w x
836 G ----- o x
837 U ----- w x
838 G ----- w x
839 C ----- x x
840 C ----- x x
841 C ----- x x
842 U ----- w x
843 U ----- w x
844 G ----- w x
845 A ----- x x
846 G ----- x x
847 G ----- x x
848 C ----- x x
849 G ----- w x
850 U ----- w x
851 G ----- w x
852 G ----- w x
853 C ----- w x
854 U ----- w x
855 U ----- w x
856 C ----- w x
857 C ----- w x
858 G ----- w x
859 G ----- w x
860 A ----- o x
861 G ----- g x
862 C ----- w w
863 U ----- w w
864 A 301 U A a
865 A 302 A A A
866 C 303 A w w
867 G ----- w w
868 C ----- c w
869 G ----- w x
870 U ----- x x
871 U ----- x x
872 A ----- a a
873 A ----- A x
874 G ----- g w
875 U ----- w w
876 C ----- w w
877 G ----- w w
878 A ----- w w
879 C ----- o w
880 C 304 A o o
881 G 305 A w w
882 C 306 G c c
883 C 307 A o o
884 U 308 G o w
885 G 309 C G g
886 G 310 A g o
887 G 311 G g g
888 G 312 G o w
889 A 313 A A A
890 G 314 G g o
891 U 315 U U U
892 A 316 A A A
893 C ----- w o
894 G 317 A g g
895 G 318 A w w
896 C 319 G w w
897 C 320 U c c
898 G ----- G o
899 C 321 U C o
900 A 322 G A a
901 A 323 U A a
902 G 324 A g g
903 G 325 U w w
904 U 326 U w w
905 U 327 U u u
906 A ----- w w
907 A 328 A A A
908 A 329 A A A
909 A 330 A A A
910 C 331 C c c
911 U 332 U U u
912 C 333 G w w
913 A 334 A A a
914 A 335 A A A
915 A 336 A A A
916 U 337 A o o
917 G 338 G g g
918 A 339 A A A
919 A 340 U A o
----- 341 A --- ---
920 U 342 U U u
921 U 343 U u u
922 G 344 G G G
923 A 345 G a o
924 C 346 C C C
925 G 347 A G G
926 G 348 G G G
927 G 349 A o w
928 G 350 C w w
----- 351 A --- ---
929 G 352 U o w
930 C 353 U w w
931 C 354 C w w
932 C 355 U c o
933 G 356 A w w
934 C 357 A c o
935 A 358 A A o
936 C 359 U C c
937 A 360 U o w
938 A 361 A a o
939 G 362 U g o
940 C 363 C w w
941 G 364 U w w
942 G 365 U g g
943 U 366 U w w
944 G 367 G G G
945 G 368 G g g
946 A 369 A A A
947 G 370 G g g
948 C 371 G o o
949 A 372 C w w
950 U 373 U U U
951 G 374 G G G
952 U 375 A w w
953 G 376 G g o
954 G 377 U g o
955 U 378 A w w
956 U 379 G U o
957 U 380 U u u
958 A 381 A A A
959 A ----- A x
960 U 382 A U o
961 U 383 C U u
962 C 384 U w o
963 G 385 G G G
964 A 386 A A A
965 U 387 G w w
966 G 388 A w w
967 C 389 A o w
968 A 390 C o w
969 A 391 C A o
970 C 392 C c c
971 G 393 U w w
972 C 394 C C C
973 G 395 A g g
974 A 396 U w w
975 A 397 U w w
976 G ----- w w
977 A ----- a a
978 A 398 A A A
979 C 399 A o o
980 C 400 C C C
981 U 401 U U u
982 U ----- o w
983 A 402 A A A
984 C 403 C C C
985 C 404 U C c
986 U 405 U w w
987 G 406 A w w
988 G 407 A w w
989 U 408 U w w
990 C 409 U o w
991 U 410 U x x
992 U ----- x x
993 G 411 U x x
994 A 412 U x x
995 C 413 U x x
996 A ----- x x
997 U ----- x x
998 C ----- x x
999 C ----- x x
1000 A ----- x x
1001 C ----- x x
1002 G ----- x x
1003 G ----- x x
1004 A ----- x x
1005 A ----- x x
1006 G ----- x x
1007 U ----- x x
1008 U ----- x x
1009 U ----- x x
1010 U ----- x x
1011 C ----- x x
1012 A ----- x x
1013 G ----- x x
1014 A ----- x x
1015 G ----- x x
1016 A ----- x x
1017 U ----- x x
1018 G ----- x x
1019 A ----- x x
1020 G ----- x x
1021 A ----- x x
1022 A ----- x x
1023 U ----- x x
1024 G ----- x x
1025 U ----- x x
1026 G ----- x x
1027 C ----- x x
1028 C ----- x x
1029 U ----- x x
1030 U ----- x x
1031 C ----- x x
1032 G ----- x x
1033 G ----- x x
1034 G ----- x x
1035 A ----- x x
1036 A ----- x x
1037 C ----- x x
1038 C ----- x x
1039 G ----- x x
1040 U ----- x x
1041 G ----- x x
1042 A ----- x x
1043 G ----- x x
1044 A ----- x x
1045 C ----- x x
1046 A 414 G o o
1047 G 415 A g g
1048 G 416 C g o
1049 U 417 U u o
1050 G 418 C G o
1051 C 419 G w w
1052 U 420 U U u
1053 G 421 G G o
1054 C 422 U C o
1055 A 423 A A A
1056 U 424 U u o
1057 G 425 G G o
1058 G 426 A G g
1059 C 427 U w w
1060 U 428 C w w
1061 G 429 G G g
1062 U 430 U u u
1063 C 431 U o o
1064 G 432 U o w
1065 U ----- u u
1066 C ----- o o
1067 A ----- A a
----- 433 A --- ---
1068 G 434 U g g
1069 C 435 U o o
1070 U 436 U u u
1071 C 437 U o w
1072 G 438 A G o
1073 U 439 U U o
1074 G 440 U g o
1075 U 441 C w w
1076 U 442 U w w
1077 G 443 U g o
1078 U 444 A u o
1079 G 445 A G o
1080 A ----- a a
1081 A 446 G w w
1082 A 447 G w w
1083 U 448 A u o
1084 G ----- g x
1085 U ----- U x
1086 U ----- w x
1087 G ----- w x
1088 G ----- g x
1089 G ----- g x
1090 U 449 U U o
1091 U 450 U U o
1092 A 451 A a o
1093 A 452 U A a
1094 G 453 A o w
1095 U 454 A U x
1096 C ----- c x
1097 C ----- c x
1098 C ----- w x
1099 G ----- w x
1100 C ----- w w
1101 A ----- A A
1102 A ----- A o
1103 C 455 U C o
1104 G 456 A G o
1105 A 457 A a a
1106 G 458 A o o
1107 C 459 A c c
1108 G 460 A G o
1109 C 461 A w w
1110 A 462 U w o
1111 A 463 U A A
----- 464 U --- ---
1112 C 465 U c o
1113 C ----- c o
1114 C ----- o w
1115 U ----- w w
1116 U ----- w x
1117 A ----- w x
1118 U ----- x x
1119 C ----- x x
1120 C ----- x x
1121 U ----- x x
1122 U ----- x x
1123 U ----- x x
1124 G ----- x x
1125 U ----- x x
1126 U ----- x x
1127 G ----- x x
1128 C ----- x x
1129 C ----- x x
1130 A ----- x x
1131 G ----- x x
1132 C ----- x x
1133 G ----- x x
1134 G ----- x x
1135 U ----- x x
1136 C ----- x x
1137 C ----- x x
1138 G ----- x x
1139 G ----- x x
1140 C ----- x x
1141 C ----- x x
1142 G ----- x x
1143 G ----- x x
1144 G ----- x x
1145 A ----- x x
1146 A ----- x x
1147 C ----- x x
1148 U ----- x x
1149 C ----- x x
1150 A ----- x x
1151 A ----- x x
1152 A ----- x x
1153 G ----- x x
1154 G ----- x x
1155 A ----- x x
1156 G ----- o x
1157 A ----- A x
1158 C ----- C x
1159 U ----- o x
1160 G ----- o x
1161 C ----- o x
1162 C ----- o x
1163 A ----- w x
----- 466 U --- ---
1164 G 467 A o x
1165 U 468 A w x
1166 G ----- g x
1167 A 469 U x x
1168 U 470 U w x
1169 A 471 U o x
1170 A 472 A a x
1171 A 473 U w x
1172 C 474 U w x
1173 U 475 A w x
1174 G ----- o x
1175 G ----- o x
1176 A ----- o x
1177 G ----- g o
1178 G ----- g o
1179 A ----- a o
1180 A ----- a o
1181 G ----- g x
1182 G ----- o x
1183 U ----- o x
1184 G ----- o x
1185 G ----- o w
1186 G ----- o w
1187 G ----- G o
1188 A ----- w o
1189 U ----- w w
1190 G ----- w w
1191 A ----- A A
1192 C 476 A o w
1193 G 477 A o o
1194 U 478 A w w
1195 C 479 U c c
1196 A 480 A A A
1197 A 481 G w w
1198 G 482 A w w
1199 U 483 U U U
1200 C 484 A C C
1201 A 485 U w w
1202 U 486 A w w
1203 C 487 U w w
1204 A 488 A A o
1205 U 489 C u u
1206 G 490 C G g
1207 G 491 C w w
1208 C 492 G c o
1209 C 493 G c o
1210 C 494 U w o
1211 U 495 U u o
1212 U 496 U w w
1213 A 497 A A A
1214 C 498 U w w
1215 G 499 G g o
1216 A 500 A w w
----- 501 U --- ---
1217 C 502 U w w
1218 C 503 U w w
1219 A 504 A w w
1220 G 505 A G g
1221 G 506 G G G
1222 G ----- G x
1223 C 507 A C o
1224 U 508 A w w
1225 A 509 A w w
1226 C 510 C C o
1227 A 511 A A a
1228 C 512 U c o
1229 A 513 U w w
1230 C 514 U C o
1231 G 515 G o o
1232 U 516 G o w
1233 G 517 C o g
1234 C 518 C c c
1235 U 519 U U U
1236 A 520 A A A
1237 C 521 C C C
1238 A 522 A A A
1239 A 523 A o w
1240 U 524 U U U
1241 G 525 A G o
1242 G 526 U o w
1243 C ----- w w
1244 G ----- w w
1245 C ----- w w
1246 A ----- w x
1247 U ----- w x
1248 A ----- x x
1249 C ----- x x
1250 A ----- x x
1251 A ----- x x
1252 A ----- x x
1253 G ----- x x
1254 A ----- x x
1255 G ----- x x
1256 A ----- x x
1257 A ----- x x
1258 G ----- x x
1259 C ----- x x
1260 G ----- x x
1261 A ----- x x
1262 C ----- x x
1263 C ----- x x
1264 U ----- x x
1265 C ----- x x
1266 G 527 U x x
1267 C 528 U x x
1268 G 529 U x x
1269 A ----- x x
1270 G ----- x x
1271 A ----- x x
1272 G ----- x x
1273 C ----- x x
1274 A ----- x x
1275 A ----- x x
1276 G ----- x x
1277 C ----- x x
1278 G ----- x x
1279 G ----- x x
1280 A ----- x x
1281 C ----- x x
1282 C ----- x x
1283 U ----- x x
1284 C ----- x x
1285 A ----- x x
1286 U ----- x x
1287 A ----- x x
1288 A ----- x x
1289 A ----- x x
1290 G ----- w x
1291 U ----- w x
1292 G ----- w w
1293 C ----- w w
1294 G ----- w w
1295 U 530 A o w
1296 C 531 U C o
1297 G 532 A w w
1298 U 533 U w w
1299 A 534 U o w
1300 G ----- o x
1301 U ----- u x
1302 C 535 A w w
1303 C 536 U o o
1304 G 537 G g g
1305 G 538 G G o
1306 A 539 A A a
1307 U 540 U u o
1308 U 541 U w w
1309 G 542 U G o
1310 G 543 U w w
1311 A 544 A w w
1312 G 545 G w w
1313 U 546 U w w
1314 C 547 U o w
1315 U 548 U U U
1316 G 549 U G G
1317 C 550 A o w
1318 A 551 G A A
1319 A 552 U A A
1320 C 553 U o x
1321 U 0 u x
1322 C 0 o x
1323 G 554 A o w
1324 A 555 A w w
1325 C 556 C w w
1326 U 557 U w w
1327 C 558 A w w
1328 C 559 A c o
1329 A 560 A w w
1330 U 561 U u o
1331 G 562 G g o
1332 A 563 A A A
1333 A 564 A A A
1334 G 565 A o o
1335 U 566 U w w
1336 C 567 U w w
1337 G 568 G G G
1338 G 569 U G G
1339 A 570 A A A
1340 A 571 A w w
1341 U 572 A U U
1342 C 573 A w w
1343 G 574 G w w
1344 C 575 A c o
1345 U 576 C u u
1346 A 577 A a a
1347 G 578 G G G
1348 U 579 U U U
1349 A 580 A A A
1350 A 581 A a a
1351 U 582 A o w
1352 C 583 A c o
1353 G 584 A g o
1354 U 585 A w w
1355 G 586 U w w
1356 G 587 U w w
1357 A 588 C w w
1358 U ----- u o
1359 C 589 U C o
1360 A 590 U A A
1361 G 591 A w w
1362 A 592 A w w
1363 A 593 U a o
1364 U ----- w w
1365 G 594 G w w
1366 C 595 U w w
1367 C 596 A w w
1368 A 597 U o w
1369 C 598 U c o
1370 G 599 U g o
1371 G 600 U o w
1372 U 601 U u u
1373 G 602 G G g
1374 A 603 A A A
1375 A 604 A o o
1376 U 605 G U o
1377 A 606 A a o
1378 C ----- c o
1379 G 607 U G g
1380 U 608 U U o
1381 U 609 A w w
1382 C 610 U C c
1383 C 611 C c o
1384 C 612 U w w
1385 G 613 A g g
1386 G 614 G w w
1387 G 615 A w w
1388 C 616 A o w
1389 C 617 G w w
1390 U 618 U U o
1391 U 619 G U o
1392 G 620 G G G
1393 U 621 U u u
1394 A 622 A A A
1395 C 623 C C C
1396 A 624 A a a
1397 C 625 A C c
1398 A 626 A A A
1399 C 627 U C c
1400 C 628 C c c
1401 G 629 A G g
1402 C 630 U C C
1403 C 631 C C c
1404 C 632 C C C
1405 G 633 A G G
1406 U 634 U U U
1407 C 635 C C C
1408 A 636 A w o
1409 C 637 A o o
1410 A 638 U w w
1411 C 639 U w w
1412 C 640 G c o
1413 A 641 C w w
1414 U 642 C w w
1415 G 643 C w w
1416 G ----- w w
1417 G ----- w x
1418 A ----- A x
1419 G ----- w x
1420 U ----- w x
1421 G ----- w x
1422 G ----- w x
1423 G ----- w x
1424 U ----- w x
1425 U ----- w x
1426 G ----- w x
1427 C ----- w x
1428 A ----- w x
1429 A ----- w x
1430 A ----- w x
1431 A ----- w x
1432 G ----- g x
1433 A ----- a x
1434 A ----- o x
1435 G ----- o x
1436 U ----- w x
1437 A ----- w x
1438 G ----- x x
1439 G ----- w x
1440 U ----- w x
1441 A ----- x x
1442 G ----- x x
1443 C ----- x x
1444 U ----- x x
1445 U ----- x x
1446 A ----- x x
1447 A ----- x x
1448 C ----- x x
1449 C ----- x x
1450 U 644 A w x
1451 U 645 A w x
1452 C 646 A w x
1453 G ----- x x
1454 G ----- x x
1455 G ----- x x
1456 A ----- x x
1457 G ----- x x
1458 G ----- x x
1459 G ----- x x
1460 C ----- x x
1461 G ----- o x
1462 C ----- w x
1463 U ----- w x
1464 U ----- w x
1465 A ----- w x
1466 C ----- w x
1467 C ----- w x
1468 A ----- A x
1469 C ----- w x
1470 U ----- w x
1471 U ----- w x
1472 U ----- o x
1473 G ----- w x
1474 U ----- w x
1475 G ----- w x
1476 A ----- w x
1477 U ----- w x
1478 U ----- w x
1479 C ----- w x
1480 A ----- w x
1481 U ----- w x
1482 G ----- o x
1483 A ----- A x
1484 C ----- w w
1485 U 647 G w w
1486 G 648 G w w
1487 G 649 G w o
1488 G 650 G g w
1489 G 651 A w w
1490 U 652 G w w
1491 G 653 U w w
1492 A 654 A A A
1493 A 655 A A A
1494 G 656 G G G
1495 U 657 U U U
1496 C 658 U C c
1497 G 659 G G G
1498 U 660 U U u
1499 A 661 A A A
1500 A 662 G A A
1501 C 663 U C c
1502 A 664 A A A
1503 A 665 A a o
1504 G 666 A G g
1505 G 667 G G G
1506 U 668 U u U
1507 A 669 A w w
1508 A 670 G w w
1509 C 671 A c w
1510 C 672 U c o
1511 G 673 U g o
1512 U 674 U U u
1513 A 675 A a a
1514 G 676 G w w
1515 G 677 G w w
1516 G 678 G w w
1517 G 679 G g g
1518 A 680 A a a
1519 A 681 A a A
1520 C 682 C w w
1521 C 683 C w w
1522 U 684 U u u
1523 G 685 G g g
1524 C 686 A o w
1525 G 687 A w w
1526 G 688 U g w
1527 U 689 C w w
1528 U 690 U w w
1529 G 691 A g g
1530 G 692 G g g
1531 A 693 U a a
1532 U 694 A u w
1533 C 695 A c w
1534 A 696 U a o
1535 C 697 A x x
1536 C ----- x x
1537 U ----- x x
1538 C ----- x x
1539 C ----- x x
1540 U ----- w x
1541 U ----- w x
1542 A ----- x x