Last modified on 11 May 2000.
| U-Turn | Pattern | B | A | C | E |
|---|---|---|---|---|---|
| 16S:159-162 [A (Hairpin)] | GAAA | 97.9 | 97.7 | 95.3 | 2.1 |
| UAUU | -- | -- | 0.6 | 81.3 | |
| gap | 1.0 | 2.3 | 0.6 | 1.5 | |
| Other | 1.1 | -- | 3.5 | 15.1 | |
| N | 11 | 1 | 6 | 26 | |
| Seq | 4886 | 217 | 169 | 1026 | |
| 16S:297-300 [A (Hairpin)] | GAGA | 97.0 | 80.1 | 97.1 | -- |
| GGGA | 0.2 | 16.5 | -- | -- | |
| UAGG | -- | -- | -- | 47.7 | |
| CAGG | -- | -- | -- | 18.7 | |
| GGGU | -- | -- | -- | 17.6 | |
| AAGG | -- | -- | -- | 5.8 | |
| gap | 1.0 | 2.3 | -- | 0.9 | |
| Other | 1.8 | 3.0 | 2.9 | 9.3 | |
| N | 20 | 5 | 6 | 21 | |
| Seq | 5103 | 231 | 170 | 1029 | |
| 16S:727-730 [A (Hairpin)] | GAAG | 92.0 | 62.7 | 29.8 | 5.4 |
| GAAA | 5.6 | 27.0 | 66.7 | 91.6 | |
| gap | 1.0 | 4.6 | 1.8 | 1.3 | |
| Other | 1.4 | 5.7 | 1.7 | 1.7 | |
| N | 15 | 5 | 5 | 10 | |
| Seq | 4916 | 241 | 168 | 1043 | |
| 16S:898-901 [A (Hairpin)] | GCAA | 97.9 | 100.0 | 94.5 | 94.1 |
| gap | 0.9 | -- | -- | 4.8 | |
| Other | 1.2 | -- | 5.5 | 1.1 | |
| N | 19 | 1 | 4 | 5 | |
| Seq | 4547 | 220 | 165 | 1039 | |
| 16S:1077-1080 [A (Hairpin)] | GUGA | 98.8 | 92.0 | 58.5 | 67.3 |
| GCGA | 0.0 | 7.0 | -- | 19.3 | |
| GUAA | 0.1 | -- | 27.4 | 0.2 | |
| UUGA | 0.0 | -- | 11.0 | 1.8 | |
| gap | 0.5 | -- | -- | 2.2 | |
| Other | 0.6 | 1.0 | 3.1 | 9.2 | |
| N | 14 | 3 | 6 | 13 | |
| Seq | 4505 | 207 | 164 | 1029 | |
| 16S:1266-1269 [A (Hairpin)] | GCGA | 57.3 | -- | 60.7 | -- |
| GUGA | 25.4 | -- | 15.5 | -- | |
| GCAA | 7.5 | -- | 7.7 | -- | |
| GAAA | 0.0 | 82.6 | --- | 0.1 | |
| GAGA | 0.6 | 15.9 | 0.6 | -- | |
| gap | 3.8 | 1.0 | 0.6 | 99.5 | |
| Other | 5.4 | 0.5 | 14.9 | 0.4 | |
| N | 24 | 3 | 19 | 4 | |
| Seq | 4680 | 207 | 168 | 1027 | |
| 23S:463-466 [A (Hairpin)] | GUGA | 94.0 | 97.3 | 44.0 | 62.3 |
| GCGA | 2.5 | 2.7 | 44.0 | 23.4 | |
| ACGA | -- | -- | 9.0 | 1.3 | |
| GUAA | 2.5 | -- | -- | 10.4 | |
| gap | 0.7 | -- | -- | 0.4 | |
| Other | 0.3 | -- | 3.0 | 2.2 | |
| N | 4 | 2 | 6 | 9 | |
| Seq | 282 | 37 | 100 | 231 | |
| 23S:630-633 [A (Hairpin)] | GAAA | 97.5 | 100.0 | 96.0 | 61.9 |
| GAAG | -- | -- | -- | 23.3 | |
| gap | 1.8 | -- | -- | 2.5 | |
| Other | 0.7 | -- | 4.0 | 12.3 | |
| N | 3 | 1 | 4 | 14 | |
| Seq | 282 | 37 | 100 | 202 | |
| 23S:1223-1226 [A (Hairpin)] | GUAA | 32.0 | 10.8 | 45.0 | 22.2 |
| GUGA | 26.3 | 48.6 | 6.0 | 35.1 | |
| GGAA | 22.2 | -- | 14.0 | -- | |
| GAGA | 7.1 | 24.4 | 2.0 | -- | |
| GCGA | 2.3 | 10.8 | 5.0 | 24.2 | |
| GAAA | 4.9 | 2.7 | 17.0 | -- | |
| gap | 0.4 | -- | -- | 1.5 | |
| Other | 4.8 | 2.7 | 11.0 | 9.3 | |
| N | 13 | 6 | 11 | 12 | |
| Seq | 266 | 37 | 100 | 194 | |
| 23S:2375-2378 [A (Hairpin)] | GAAA | 97.9 | 90.2 | 96.1 | 94.9 |
| GAGA | -- | 7.3 | -- | -- | |
| gap | 2.1 | -- | -- | 0.6 | |
| Other | -- | 2.5 | 3.9 | 4.5 | |
| N | 1 | 3 | 3 | 5 | |
| Seq | 242 | 41 | 102 | 156 | |
| 23S:2595-2598 [A (Hairpin)] | GUGA | 96.2 | 70.7 | 50.0 | 98.6 |
| GCGA | 3.8 | 29.3 | -- | 0.7 | |
| gap | -- | -- | 46.1 | 0.7 | |
| Other | -- | -- | 3.9 | -- | |
| N | 2 | 2 | 2 | 2 | |
| Seq | 237 | 41 | 102 | 140 | |
| 23S:2659-2662 [A (Hairpin)] | GAGA | 99.2 | 100.0 | 56.9 | 99.3 |
| gap | -- | -- | 43.1 | 0.7 | |
| Other | 0.8 | -- | -- | -- | |
| N | 1 | 1 | 1 | 1 | |
| Seq | 237 | 41 | 102 | 140 | |
| 23S:2857-2860 [A (Hairpin)] | GUAA | 27.9 | 17.1 | 26.0 | -- |
| GCGA | 25.2 | -- | -- | -- | |
| GUGA | 17.1 | -- | 12.0 | -- | |
| GCAA | 14.0 | 9.8 | 12.0 | -- | |
| UUCG | -- | 12.2 | -- | 0.8 | |
| GUUU | -- | 9.8 | -- | -- | |
| CUUA | 11 | 9.8 | -- | -- | |
| GAAA | 1.8 | 7.3 | -- | -- | |
| CUUU | 11 | -- | -- | 8.4 | |
| gap | 10.8 | 12.2 | 50.0 | 80.7 | |
| Other | 3.2 | 21.8 | -- | 10.1 | |
| N | 11 | 12 | 3 | 13 | |
| Seq | 222 | 41 | 100 | 119 |
