Last modified on 11 May 2000.


U-Turn Pattern B A C E
16S:260-266 [F (Hairpin)] GUAAUGG 30.8 19.6 21.8 4.2
GUAACGG 25.8 52.7 6.5 0.1
GUAAAGG 20.3 5.8 12.4 0.9
GUAAUGU -- 5.4 -- --
GCAAUAG -- -- 15.9 --
GCAAUGG -- -- 10.0 --
GUAUUGG -- -- -- 23.2
AUAGAGG -- -- -- 16.8
GUAUUGU -- -- -- 10.0
GUAGUGG 1.3 0.9 -- 7.6
UUCUGCG -- -- -- 7.5
AUAGUGG -- -- -- 6.3
gap 2.5 -- 2.4 1.0
Other 19.3 15.6 31.0 22.4
N 56 15 23 67
Seq 5038 224 170 1029
16S:691-696 [F (Hairpin)] GUGAAA 78.1 60.9 93.5 95.1
GUGGAA 11.8 1.3 -- 0.3
GUAAAA 5.9 14.6 0.6 0.3
GCGAAA 0.0 21.5 -- 0.1
gap 3.3 1.7 0.6 1.2
Other 0.9 -- 5.3 3.0
N 20 4 7 7
Seq 4873 233 169 1043
23S:714-717 [F (Hairpin)] UAAC 49.6 -- 45.0 0.5
UAAG 23.4 -- 1.0 --
UAAA 19.5 -- 22.0 --
GAAA -- 78.4 -- 95.6
UUAC -- 8.1 -- --
GCCA -- 5.4 -- --
AACA -- 5.4 -- 2.0
UGAA 1.1 -- 13.0 --
UAAU 4.6 -- 7.0 --
UGAU -- -- 5.0 --
gap -- -- -- 0.5
Other 1.8 2.7 7.0 1.4
N 10 5 9 6
Seq 282 37 100 205
23S:1093-1098 [F (Hairpin)] GUAAUA 78.4 -- 90.0 0.5
GUAACA 20.1 100.0 7.0 92.7
gap -- -- -- 1.9
Other 1.5 -- 3.0 4.9
N 5 1 4 7
Seq 259 37 100 206