Last modified on 11 May 2000.
U-Turn | Pattern | B | A | C | E |
---|---|---|---|---|---|
16S:787-795 [H (Hairpin)] | AUUAGAUAC | 95.6 | 98.7 | 91.1 | 20.6 |
AUUAGAGAC | 0.3 | -- | 6.0 | 3.1 | |
AUCAGAUAC | -- | -- | -- | 73.3 | |
gap | 1.9 | 0.9 | -- | 2.9 | |
Other | 2.2 | 0.4 | 2.9 | 5.7 | |
N | 25 | 2 | 7 | 13 | |
Seq | 4861 | 230 | 168 | 1028 | |
16S:1065-1067 [H (Multi-Stem)] | UCA | 98.1 | 67.2 | 99.4 | 2.4 |
CCA | 0.3 | 30.3 | -- | 1.2 | |
UUA | 0.0 | -- | -- | 89.1 | |
gap | 1.3 | 2.0 | 0.6 | 1.8 | |
Other | 0.3 | 0.5 | -- | 5.5 | |
N | 8 | 3 | 1 | 13 | |
Seq | 4515 | 201 | 164 | 1029 | |
16S:1358-1364 [H (Hairpin)] | UCAGCAU | 45.4 | -- | 78.1 | -- |
UCAGCAC | 22.2 | -- | 8.3 | 0.7 | |
UCAGAAU | 20.7 | 0.5 | 1.2 | -- | |
UCAACAA | -- | 14.5 | -- | 0.3 | |
UCAGAAG | 0.0 | 9.2 | -- | -- | |
UCAUCAU | 0.2 | 8.2 | -- | 13.8 | |
UCAUAAU | -- | 7.7 | 1.8 | -- | |
UCAAUAU | -- | 7.7 | -- | 0.1 | |
UCAACAU | 0.1 | 6.3 | -- | 0.1 | |
UCACUAU | 0.0 | 5.8 | -- | -- | |
UCAACAG | -- | 5.8 | -- | 0.1 | |
UCAUCAG | -- | -- | -- | 50.9 | |
UCAUAAG | -- | 1.9 | -- | 11.9 | |
UCAUCAA | -- | -- | -- | 7.1 | |
gap | 3.2 | 1.9 | 4.1 | 1.0 | |
Other | 8.2 | 30.5 | 6.5 | 14.0 | |
N | 47 | 23 | 12 | 34 | |
Seq | 4603 | 207 | 169 | 1029 | |
23S:1951-1955 [H (Hairpin)] | UAAGU | 90.4 | 53.7 | 100.0 | -- |
UAAAU | 6.3 | 7.3 | -- | -- | |
UCAGU | -- | 17.1 | -- | -- | |
UAAUU | 0.8 | 9.8 | -- | 92.3 | |
CAGGU | 0.4 | 7.3 | -- | ||
gap | 1.7 | -- | -- | -- | |
Other | 0.4 | 4.8 | -- | 7.7 | |
N | 5 | 6 | 1 | 5 | |
Seq | 240 | 41 | 101 | 155 | |
23S:2738-2741 [H (Internal) | AUAA | 97.9 | 31.7 | 52.0 | 15.1 |
GUAA | -- | 58.5 | -- | 0.7 | |
AUUA | -- | -- | 1.0 | 71.2 | |
gap | 1.7 | -- | 43.1 | 1.4 | |
Other | 0.4 | 9.8 | 3.9 | 11.6 | |
N | 2 | 4 | 5 | 14 | |
Seq | 236 | 41 | 102 | 139 |