Last modified on 11 May 2000.
| U-Turn | Pattern | B | A | C | E |
|---|---|---|---|---|---|
| 16S:116-121 [I (Multi-Stem)] | AGUAAC | 66.1 | 90.2 | 69.0 | 0.8 |
| AGUAAU | 21.8 | 0.5 | 10.1 | 1.9 | |
| CGUAAC | 5.2 | 1.5 | 6.5 | -- | |
| AUUAAA | -- | -- | -- | 57.0 | |
| GGUAAA | -- | -- | -- | 17.1 | |
| AUUAUA | -- | -- | -- | 9.5 | |
| gap | 2.3 | -- | 1.8 | 1.9 | |
| Other | 4.6 | 7.8 | 12.6 | 11.8 | |
| N | 39 | 9 | 10 | 30 | |
| Seq | 4787 | 205 | 168 | 1023 | |
| 16S:557-566 [I (Multi-Stem)] | GGAAUUACUG | 37.5 | -- | 5.3 | -- |
| GGAAUUAUUG | 22.0 | -- | 14.8 | -- | |
| GGAUUUAUUG | 10.5 | -- | -- | -- | |
| GGAUUUACUG | 8.5 | -- | 0.6 | -- | |
| GGAAUCACUG | 7.9 | -- | 11.8 | -- | |
| GCUUUUAUUG | -- | 10.6 | -- | -- | |
| ACUUUUAUUG | -- | 6.6 | -- | -- | |
| ACUAUUAUUG | -- | 6.6 | -- | -- | |
| GAUCUUAUUG | -- | 6.2 | -- | -- | |
| GCUAUUAUUG | -- | 5.8 | -- | -- | |
| GAUAUUAUUG | -- | 5.3 | -- | -- | |
| GGAAUGAUUG | 0.4 | -- | 46.2 | -- | |
| GGAAUCAUUG | 2.4 | -- | 8.9 | -- | |
| AAAGUUGUUG | -- | -- | -- | 64.0 | |
| UAAGUUGUUG | -- | -- | -- | 7.0 | |
| gap | 2.8 | 3.1 | 1.8 | 2.6 | |
| Other | 8.0 | 55.8 | 10.6 | 26.4 | |
| N | 62 | 39 | 18 | 47 | |
| Seq | 4772 | 226 | 169 | 1042 | |
| 23S:446-460 [I (Multi-Stem)] | GAUAGUGAACCAGUA | 48.2 | -- | -- | -- |
| UAUAGUGAACCAGUA | 11.0 | -- | -- | -- | |
| GAUAGUGAACAAGUA | 5.7 | 13.5 | 1.0 | 0.9 | |
| GAUAGCGAACAAGUA | 2.5 | 35.1 | 3.0 | 46.9 | |
| GAUAGCGAACUAGUA | -- | 18.9 | 6.0 | -- | |
| GAUAGCAAACAAGUA | -- | 8.1 | -- | 18.0 | |
| GAUAGCGCAAUAGUA | -- | 5.4 | -- | -- | |
| GAUAGCGAAAUAGUA | -- | -- | 25.0 | -- | |
| GAUAGUGAAAUAGUA | -- | -- | 14.0 | -- | |
| GAUAGUGAAGUAGUA | -- | -- | 9.0 | -- | |
| GAUAGCGAAGUAGUA | -- | -- | 8.0 | -- | |
| GAUAGUGAAACAGUA | -- | -- | 5.0 | -- | |
| gap | 10.3 | 8.1 | 11.0 | 9.6 | |
| Other | 22.3 | 10.9 | 18.0 | 24.6 | |
| N | 22 | 9 | 21 | 36 | |
| Seq | 282 | 37 | 100 | 228 | |
| 23S:1339-1342 [I (Multi-Stem)] | GUUA | 61.8 | 73.2 | 40.0 | 56.4 |
| GUGA | 27.2 | 14.6 | 46.0 | 17.7 | |
| GUAA | 9.1 | 2.4 | 9.0 | 2.2 | |
| GUCA | 0.4 | 9.8 | 2.0 | 17.1 | |
| GUUG | -- | -- | -- | 5.5 | |
| gap | 1.1 | -- | -- | 1.1 | |
| Other | 0.4 | -- | 3.0 | -- | |
| N | 5 | 4 | 6 | 5 | |
| Seq | 265 | 41 | 100 | 181 | |
| 23S:2162-2173 [I (Internal)] | AUCGGUGGGAUA | 9.5 | -- | -- | -- |
| GUCCUUGAAAUA | 8.3 | -- | -- | -- | |
| GACCUUGAAAUA | 8.3 | -- | -- | 0.6 | |
| AUCCUUGAAAUA | 6.6 | -- | -- | -- | |
| GUUGUUGAAAUA | 5.0 | -- | -- | -- | |
| GAAAGUGAAACA | -- | 14.6 | -- | -- | |
| GCCAAUGAAACA | -- | 9.8 | -- | -- | |
| GUCCCUGAAACA | -- | 9.8 | -- | -- | |
| GGUCAUGAGACA | -- | 7.3 | -- | -- | |
| AACAGUGAAAUA | 0.8 | 7.3 | -- | -- | |
| GUCCAUGAGACA | -- | 7.3 | -- | -- | |
| AUCAGUGAGAGA | -- | -- | 29.7 | -- | |
| AUCAUUGAGAGA | -- | -- | 13.9 | -- | |
| AUCAGUGAGAUA | -- | -- | 11.9 | -- | |
| GUCAUUGAGAGA | -- | -- | 8.9 | -- | |
| AACAGUGAGAGA | -- | -- | 5.0 | -- | |
| GCCGGUGAAAUA | 0.8 | -- | -- | 18.7 | |
| GUCCGUGAAAUA | -- | -- | -- | 12.3 | |
| GCAAGUGAAAUA | -- | -- | -- | 9.7 | |
| GAAAGUGAAAUA | -- | -- | -- | 8.4 | |
| GCCAGUGAAAUA | -- | -- | -- | 5.2 | |
| gap | 0.4 | -- | -- | 4.5 | |
| Other | 60.3 | 43.9 | 30.6 | 40.6 | |
| N | 57 | 18 | 26 | 42 | |
| Seq | 242 | 41 | 101 | 155 | |
| 23S:2265-2275 [I (Hairpin)] | UAAAGAGUAAC | 23.5 | -- | 3.9 | -- |
| UAAAAGGUAAC | 18.9 | -- | 48.0 | -- | |
| UAAAAAGUAAC | 8.2 | -- | 7.8 | 2.6 | |
| CAAAGAGUAAC | 7.8 | -- | -- | 1.9 | |
| CAAAGCGUAAC | 6.2 | -- | 1.0 | -- | |
| CAAAGUGUAAC | 5.3 | -- | -- | 0.6 | |
| GAAAAGAUAUC | -- | 26.8 | -- | -- | |
| GAAAAGAUAAC | -- | 22.0 | -- | -- | |
| GAAAAGGUAUC | -- | 12.2 | -- | -- | |
| GAAAGGGUAAC | -- | 9.8 | -- | -- | |
| GAAAUGGUAUC | -- | 7.3 | -- | -- | |
| GAAAAGGUAAC | -- | 7.3 | -- | -- | |
| CAAAAGGUAAC | 2.5 | -- | 14.7 | -- | |
| UAAAGCGUAAC | 2.5 | -- | 5.9 | -- | |
| UAAAAGAUAAC | 0.4 | -- | -- | 32.3 | |
| UACAAGACAAC | -- | -- | -- | 10.3 | |
| UAAACGAUAAC | -- | -- | -- | 7.7 | |
| CAAACGGUAAC | -- | -- | 1.0 | 7.1 | |
| GAAACAAUAGC | -- | -- | -- | 5.2 | |
| gap | 2.5 | -- | 1.0 | 5.2 | |
| Other | 22.2 | 14.6 | 16.7 | 27.1 | |
| N | 22 | 11 | 16 | 37 | |
| Seq | 243 | 41 | 102 | 155 | |
| 23S:2422-2433 [I (Multi-Stem)] | CUCAACGGAUAA | 76.4 | -- | 82.4 | -- |
| CUCAAAGGAUAA | 5.4 | -- | -- | -- | |
| CUUAACGGAUAA | 5.4 | -- | 2.9 | -- | |
| gap | 0.8 | 100.0 | 4.9 | 100.0 | |
| Other | 12.0 | -- | 9.8 | -- | |
| N | 16 | -- | 7 | -- | |
| Seq | 242 | 41 | 102 | -- | |
| 23S:2448-2454 [I (Multi-Stem)] | AUAACAG | 99.6 | 82.9 | 99.0 | -- |
| AUAACUG | -- | 9.8 | -- | 98.6 | |
| gap | -- | -- | 1.0 | 1.4 | |
| Other | 0.4 | 7.3 | -- | -- | |
| N | 2 | 4 | 1 | 1 | |
| Seq | 242 | 7.3 | 102 | 139 | |
| 23S:2497-2506 [I (Multi-Stem)] | ACCUCGAUGU | 99.2 | 36.6 | 100.0 | -- |
| ACAUCGAUGU | -- | 29.3 | -- | -- | |
| ACUUCGAUGU | -- | 9.8 | -- | -- | |
| ACCUCGCUGU | -- | 7.3 | -- | -- | |
| ACCCAGACGU | -- | 7.3 | -- | -- | |
| CCUUCGAUGU | -- | -- | -- | 81.3 | |
| UCUUCGAUGU | -- | -- | -- | 18.0 | |
| gap | 0.4 | -- | -- | 0.7 | |
| Other | 0.4 | 9.7 | -- | -- | |
| N | 2 | 7 | 1 | 2 | |
| Seq | 242 | 41 | 102 | 139 | |
| 23S:2583-2587 [I (Multi-Stem)] | GUUCA | 62.4 | 17.1 | 94.1 | -- |
| GUUUA | 37.2 | 82.9 | -- | 96.4 | |
| gap | 0.4 | -- | 4.9 | 1.4 | |
| Other | -- | -- | 1.0 | 2.2 | |
| N | 2 | 2 | 2 | 3 | |
| Seq | 242 | 41 | 102 | 140 |
