Haloferax volcanii | Methanosprillum hungatei | |||
---|---|---|---|---|
Comparative Base-pairs1 | 439 | 432 | ||
750 Structure Predictions | ||||
Total Base-pairs | 358,484 | 335,829 | ||
Total Unique Base-pairs2 | 4,679 | 5,013 | ||
Unique Base-pairs (opt)3 | 4804a | 10%4b | 447 | 9% |
Unique Base-pairs (subopts) | 4,1995a | 90%5b | 4,566 | 91% |
Unique Correct Base-pairs (opt) | 3506a | 73%6b | 198 | 44% |
Prediction Accuracy7 | 80% | 46% | ||
Unique Correct Base-pairs (opt + subopts) | 4018a | 9%8b | 352 | 7% |
Prediction Accuracy9 | 91% | 81% | ||
Unique Incorrect Base-pairs (opt) | 13010a | 27%10b | 249 | 56% |
Unique Incorrect Base-pairs (opt + subopts) | 4,27811a | 91%11b | 4,661 | 93% |
1000 Structure Predictions | ||||
Total Base-pairs | 478,075 | 447,762 | ||
Total Unique Base-pairs | 6,092 | 6,242 | ||
Unique Base-pairs (opt) | 480 | 8% | 447 | 7% |
Unique Base-pairs (subopts) | 5,612 | 92% | 5,795 | 93% |
Unique Correct Base-pairs (opt) | 350 | 73% | 198 | 44% |
Unique Correct Base-pairs (opt + subopts) | 403 | 7% | 358 | 6% |
Unique Incorrect Base-pairs (opt) | 130 | 27% | 249 | 56% |
Unique Incorrect Base-pairs (opt + subopts) | 5,689 | 93% | 5,884 | 94% |
Each population is for a specific 16S rRNA sequence folded for one optimal predictions and 749 to 999 suboptimal structure predictions.
1 Total number of comparative G:C, A:U and G:U base-pairs.
2 Total number of unique base-pairs predicted by MFold in the optimal and suboptimal structure predictions.
3 (opt), Optimal or minimum free energy structure prediction; (subopts), Suboptimal structure predictions.
4a Total unique base-pairs in the optimal MFold strucure prediction.
4b Percentage of total unique base-pairs predicted that are from the optimal structure predictions.
5a Total unique base-pairs from the suboptimal MFold structure predictions.
5b Percentage of total unique base-pairs predicted that are from the suboptimal structure predictions.
6a Total unique correct base-pairs in the optimal MFold structure prediction.
6b Percentage of base-pairs in the optimal MFold structure prediction which are unique and correct.
7 Comparative structure prediction accuracy based on unique correct base-pairs in the optimal MFold structure prediction only.
8a Total unique correct base-pairs from the optimal and all suboptimal MFold structure predictions.
8b Percentage of all unique base-pairs predicted which are correct.
9 Comparative structure prediction accuracy based on unique correct base-pairs from the MFold optimal and all suboptimal structure predictions.
10a Total unique incorrect base-pairs in the optimal MFold structure prediction.
10b Percentage of base-pairs in the optimal MFold structure prediction which are unique and incorrect.
11a Total unique incorrect base-pairs from the optimal and all suboptimal MFold structure predictions.
11b Percentage of all unique base-pairs predicted which are incorrect.