Accession Comparative Base Pairs1 Predicted Correctly1 Accuracy Diagrams2
Archaea
Haloarcula marismortui AF034620 34 29 85% PDF | Text
Haloferax mediterranei X14441 34 10 29% PDF | Text
Methanococcus jannaschii U67518 L77117 37 28 76% PDF | Text
Methanolobus tindarius M34910 41 40 98% PDF | Text
Methanothermococcus thermolithotrophicus M34911 36 18 50% PDF | Text
Methanothermus fervidus M26976 40 31 78% PDF | Text
Pyrococcus woesei X15329 39 30 77% PDF | Text
Pyrodictium occultum M21086 45 41 91% PDF | Text
Sulfolobus acidocaldarius V01286 41 38 93% PDF | Text
Sulfolobus solfataricus X01588 Y08257 41 38 93% PDF | Text
Thermococcus celer X07692 39 36 92% PDF | Text
Thermoplasma acidophilum M32297 X02709 36 33 92% PDF | Text
Bacteria
Acidithiobacillus ferrooxidans M11542 U18089 35 32 91% PDF | Text
Agrobacterium tumefaciens X02627 35 33 94% PDF | Text
Arthrobacter globiformis M16173 34 25 74% PDF | Text
Arthrobacter globiformis X08002 33 22 67% PDF | Text
Arthrobacter oxydans X08000 33 22 67% PDF | Text
Bacillus subtilis D11460 32 23 72% PDF | Text
Campylobacter jejuni AL139076 31 9 29% PDF | Text
Deinococcus radiodurans AE002087 35 31 89% PDF | Text
Delftia acidovorans AJ131594 34 26 76% PDF | Text
Escherichia coli V00336 37 10 27% PDF | Text
Geobacillus stearothermophilus M10816 33 18 55% PDF | Text
Geobacillus stearothermophilus AJ251080 33 16 48% PDF | Text
Geobacillus stearothermophilus M24839 29 8 28% PDF | Text
Geobacillus stearothermophilus M25591 33 27 82% PDF | Text
Haemophilus influenzae U32688 35 29 83% PDF | Text
Micrococcus luteus K02682 35 27 77% PDF | Text
Mycoplasma genitalium U39694 32 26 81% PDF | Text
Planctomyces brasiliensis M35168 30 6 20% PDF | Text
Pseudomonas aeruginosa K02353 36 32 89% PDF | Text
Pseudomonas stutzeri M34776 34 22 65% PDF | Text
Rhodobacter capsulatus X04585 33 28 85% PDF | Text
Spiroplasma melliferum X06098 17 6 35% PDF | Text
Sporosarcina pasteurii X02024 33 6 18% PDF | Text
Staphylococcus aureus L36472 32 18 56% PDF | Text
Synechococcus sp. PCC 6301 X00757 X00343 32 27 84% PDF | Text
Thermus aquaticus X01590 37 14 38% PDF | Text
Thermus sp. M16532 34 30 88% PDF | Text
Thermus thermophilus V01415 36 8 22% PDF | Text
Eukaryotic Chloroplast
Chlamydomonas reinhardtii BK000554 34 29 85% PDF | Text
Euglena gracilis K02483 X70810 31 5 16% PDF | Text
Marchantia polymorpha X00666 X04465 34 29 85% PDF | Text
Zea mays M19943 M36716 Z00028 X86563 35 28 80% PDF | Text
Eukaryotic Mitochondrion
Reclinomonas americana U59762 34 31 91% PDF | Text
Eukaryotic Nuclear
Acanthamoeba castellanii V00003 36 27 75% PDF | Text
Acheta domesticus M16704 35 29 83% PDF | Text
Amoebidium parasiticum M36306 36 34 94% PDF | Text
Ascobolus immersus X99087 35 32 91% PDF | Text
Asterias vulgaris X00992 32 27 84% PDF | Text
Aurelia aurita X00991 34 28 82% PDF | Text
Blastocladiella simplex X01543 36 32 89% PDF | Text
Blepharisma japonicum J01851 35 31 89% PDF | Text
Bos taurus X57170 35 29 83% PDF | Text
Branchiostoma belcheri X13034 35 29 83% PDF | Text
Candida albicans X00868 35 31 89% PDF | Text
Chlamydomonas reinhardtii X02706 33 16 48% PDF | Text
Christiansenia pallida M58383 33 26 79% PDF | Text
Crithidia fasciculata V00149 34 10 29% PDF | Text
Crypthecodinium cohnii M25115 36 29 81% PDF | Text
Cryptococcus neoformans var. neoformans L14753 33 30 91% PDF | Text
Cyanophora paradoxa M33029 34 24 71% PDF | Text
Diatoma tenue D00058 35 12 34% PDF | Text
Drosophila melanogaster M25016 33 26 79% PDF | Text
Dugesia japonica X01551 35 27 77% PDF | Text
Emplectonema gracile X00021 34 31 91% PDF | Text
Enchytraeus albidus X03911 35 29 83% PDF | Text
Equisetum arvense X00377 33 29 88% PDF | Text
Euglena gracilis X01484 36 27 75% PDF | Text
Exobasidium vaccinii X00069 35 32 91% PDF | Text
Globodera pallida L28955 34 27 79% PDF | Text
Gracilaria compressa X00999 34 9 26% PDF | Text
Homo sapiens Z75742 29 8 28% PDF | Text
Hyphodontia paradoxa X73890 34 27 79% PDF | Text
Mesocricetus auratus J00063 35 29 83% PDF | Text
Mortierella formosensis M36312 36 32 89% PDF | Text
Octopus vulgaris X06835 33 26 79% PDF | Text
Oryza sativa M18171 33 25 76% PDF | Text
Phaseolus vulgaris X06843 33 31 94% PDF | Text
Physarum polycephalum X02036 36 27 75% PDF | Text
Plagiomnium trichomanes X01619 33 31 94% PDF | Text
Plasmodium falciparum AF239766 35 10 29% PDF | Text
Pneumocystis carinii M28193 36 32 89% PDF | Text
Pseudocentrotus depressus X04307 D00075 35 29 83% PDF | Text
Saccharomyces cerevisiae X67579 35 28 80% PDF | Text
Schizochytrium aggregatum X06104 36 29 81% PDF | Text
Schizosaccharomyces pombe K00570 36 33 92% PDF | Text
Spirogyra sp. M10438 35 0 0% PDF | Text
Tetrahymena thermophila X00475 36 32 89% PDF | Text
Xenopus laevis X05089 36 29 81% PDF | Text
  1. Only canonical base pairs (G-C,C-G,A-U,U-A,G-U,U-G) are considered.
  2. Secondary structure diagrams available in PDF and text formats. The pdf versions of the diagrams have correctly predicted base-pairs indicated with red tick-marks.