Archaea   GC/CG AU/UA GU/UG
C1 M P A C M P A C M P A
Archaeoglobus fulgidus M64487 628 664 409 65% 110 165 76 69% 79 105 51 65%
Desulfurococcus mobilis X05480 714 820 419 59% 93 256 58 62% 67 105 29 43%
Haloarcula marismortui X13738 523 538 255 49% 210 255 97 46% 83 97 34 41%
Haloarcula marismortui rrnA AF034619 524 541 294 56% 209 261 113 54% 83 85 38 46%
Haloarcula marismortui rrnB AF034620 527 544 298 57% 211 247 115 55% 80 95 39 49%
Halobacterium salinarum X03407 518 548 299 58% 193 259 110 57% 83 103 46 55%
Halococcus morrhuae X05481 540 575 319 59% 180 223 98 54% 78 98 44 56%
Haloferax volcanii Thesis, Achenbach-Richter L. 495 520 274 55% 206 261 116 56% 77 98 40 52%
Methanococcus jannaschii U67517 L77117 683 696 463 68% 115 168 80 70% 81 102 55 68%
Methanococcus vannielii X02729 505 540 297 59% 211 274 138 65% 107 113 59 55%
Methanospirillum hungatei M81323 456 473 189 41% 240 295 90 38% 89 117 35 39%
Methanothermobacter thermautotrophicus X05482 518 547 214 41% 151 235 61 40% 173 188 66 38%
Sulfolobus acidocaldarius M67495 617 660 297 48% 154 242 96 62% 90 123 48 53%
Thermococcus celer M67497 668 711 431 65% 107 167 72 67% 85 112 53 62%
Thermofilum pendens X14835 686 741 405 59% 103 150 64 62% 78 100 37 47%
Thermoplasma acidophilum M32298 488 507 297 61% 206 272 127 62% 104 147 64 62%
Thermoproteus tenax PUBMED 699 738 436 62% 85 153 48 56% 83 102 40 48%
Bacteria   GC/CG AU/UA GU/UG
C1 M P A C M P A C M P A
Acinetobacter calcoaceticus X87280 469 471 211 45% 234 287 88 38% 117 134 47 40%
Aeromonas hydrophila X87281 495 498 244 49% 210 260 108 51% 113 130 60 53%
Aquifex aeolicus AE000709 AE000751 670 688 355 53% 104 159 60 58% 77 99 47 61%
Bacillus anthracis X64645 485 480 237 49% 232 291 106 46% 91 110 45 49%
Bacillus sp. X60981 525 562 271 52% 184 238 100 54% 94 112 51 54%
Bacillus subtilis K00637 AF008220 Z99119 520 509 268 52% 224 264 122 54% 91 125 51 56%
Bartonella bacilliformis L39095 457 460 235 51% 239 297 126 53% 106 132 64 60%
Bordetella bronchiseptica X70371 480 477 206 43% 207 262 73 35% 117 136 52 44%
Bordetella pertussis X68323 474 496 209 44% 207 264 76 37% 116 144 53 46%
Borrelia burgdorferi M88330 400 401 134 34% 320 368 133 42% 122 155 54 44%
Bradyrhizobium japonicum Z35330 472 494 268 57% 212 259 131 62% 103 134 62 60%
Bradyrhizobium japonicum X71840 477 509 282 59% 209 271 135 65% 106 133 59 56%
Burkholderia cepacia X16368 490 478 261 53% 211 261 104 49% 116 144 64 55%
Burkholderia mallei Y17183 494 490 251 51% 206 259 102 50% 121 145 62 51%
Burkholderia pseudomallei Y17184 495 489 248 50% 205 260 101 49% 121 146 61 50%
Campylobacter coli U09611 431 438 242 56% 302 361 159 53% 104 129 54 52%
Campylobacter jejuni Z29326 443 428 218 49% 277 316 140 51% 100 122 38 38%
Chlamydia suis U68420 423 452 191 45% 256 307 121 47% 114 120 56 49%
Chlamydia trachomatis U68443 448 450 170 38% 262 300 106 40% 109 118 45 41%
Chlamydophila pneumoniae U76711 AE001668 403 424 185 46% 283 340 138 49% 105 129 52 50%
Chlamydophila psittaci U68447 430 424 168 39% 297 338 138 46% 104 127 43 41%
Chlorobium limicola M62805 429 457 253 59% 198 261 116 59% 95 117 51 54%
Citrobacter freundii U77928 488 482 203 42% 218 259 93 43% 115 130 45 39%
Clostridium botulinum A X65602 474 479 250 53% 240 301 125 52% 94 118 52 55%
Clostridium botulinum B M94178 468 463 255 54% 260 310 142 55% 98 126 58 59%
Clostridium botulinum B M94259 468 466 224 48% 256 319 128 50% 99 122 56 57%
Clostridium botulinum E M94261 466 470 225 48% 256 315 128 50% 97 121 50 52%
Coxiella burnetii X79704 428 491 146 34% 238 364 91 38% 107 144 32 30%
Deinococcus radiodurans AE002087 512 518 221 43% 208 257 84 40% 89 114 30 34%
Deinococcus radiodurans AE001886 513 528 256 50% 209 248 93 44% 88 116 39 44%
Enterococcus faecalis X79341 474 475 258 54% 255 301 144 56% 95 129 59 62%
Erysipelothrix rhusiopathiae AB019250 457 456 201 44% 262 293 122 47% 98 120 46 47%
Escherichia coli J01695 502 501 276 55% 213 257 116 54% 115 125 66 57%
Flexibacter flexilis M62806 412 440 150 36% 220 270 63 29% 109 123 34 31%
Frankia sp. M55343 554 587 279 50% 173 233 86 50% 148 162 84 57%
Geobacillus stearothermophilus K02663 536 567 308 57% 185 226 109 59% 96 115 57 59%
Haemophilus influenzae (operons A-F) U32742 U32745 U32755 U32847 U32697 U32707 452 448 201 44% 250 298 106 42% 118 120 51 43%
Helicobacter pylori U27270 428 446 179 42% 257 320 104 40% 100 125 54 54%
Heliobacterium chlorum NPA2 514 533 248 48% 203 246 102 50% 102 116 56 55%
Klebsiella pneumoniae X87284 495 496 269 54% 216 252 117 54% 117 135 71 61%
Lactobacillus delbrueckii X68426 497 494 253 51% 232 279 132 57% 94 119 53 56%
Lactococcus lactis X68434 456 448 173 38% 265 311 99 37% 107 130 40 37%
Leptospira interrogans X14249 496 479 208 42% 228 277 96 42% 107 133 50 47%
Listeria monocytogenes X64533 486 484 219 45% 247 291 118 48% 94 119 37 39%
Listeria monocytogenes X68420 512 509 258 50% 234 279 129 55% 92 124 54 59%
Micrococcus luteus X06484 542 575 226 42% 187 264 71 38% 125 129 56 45%
Mycobacterium leprae X56657 538 561 298 55% 195 255 102 52% 129 142 70 54%
Mycobacterium tuberculosis Z73902 570 605 179 31% 191 263 53 28% 110 128 44 40%
Mycoplasma genitalium U39694 402 395 142 35% 319 359 143 45% 111 140 45 41%
Mycoplasma pneumoniae X68422 U00089 406 394 189 47% 309 360 159 51% 114 136 54 47%
Myroides odoratus M62807 374 390 101 27% 228 275 76 33% 99 122 31 31%
Neisseria gonorrhoeae X67293 479 475 223 47% 227 259 93 41% 113 137 52 46%
Neisseria meningitidis X67300 478 471 208 44% 236 260 90 38% 106 131 47 44%
Parachlamydia acanthamoebae Y07555 451 462 206 46% 258 311 133 52% 93 122 45 48%
Pirellula marina X07408 475 496 264 56% 208 264 107 51% 107 128 58 54%
Plesiomonas shigelloides X65487 448 443 173 39% 203 249 72 35% 111 124 42 38%
Pseudomonas aeruginosa Y00432 493 490 243 49% 206 249 95 46% 125 135 64 51%
Rhodobacter capsulatus X06485 484 513 246 51% 198 248 91 46% 104 120 51 49%
Rhodobacter sphaeroides X53853 501 535 293 58% 188 254 100 53% 99 109 54 55%
Rhodococcus erythropolis AF001265 528 565 263 50% 209 269 109 52% 131 138 76 58%
Rhodopseudomonas palustris X71839 468 495 274 59% 202 238 107 53% 106 128 62 58%
Rickettsia prowazekii AJ235270 420 403 218 52% 271 309 166 61% 97 114 59 61%
Rickettsia rickettsii U11022 406 402 222 55% 241 280 147 61% 95 111 59 62%
Ruminobacter amylophilus X06765 427 433 159 37% 263 302 112 43% 115 121 44 38%
Simkania negevensis U68460 446 452 186 42% 256 321 114 45% 94 126 42 45%
Staphylococcus aureus X68425 474 468 221 47% 260 310 130 50% 102 119 48 47%
Staphylococcus carnosus X68419 477 467 219 46% 260 309 128 49% 100 127 48 48%
Streptomyces ambofaciens M27245 551 583 308 56% 176 253 98 56% 140 162 73 52%
Streptomyces griseus X61478 538 570 232 43% 191 260 78 41% 138 149 59 43%
Synechococcus sp. PCC 6301 X00512 487 516 213 44% 198 244 72 36% 104 127 48 46%
Thermotoga maritima M67498 666 671 393 59% 125 184 80 64% 83 112 48 58%
Thermus aquaticus NPA 611 639 330 54% 112 167 53 47% 97 109 52 54%
Thermus thermophilus X12612 610 659 345 57% 108 148 56 52% 87 115 51 59%
Treponema pallidum (rRNA A) AE001204 474 478 125 26% 234 275 54 23% 132 128 36 27%
Tropheryma whipplei AF190687 508 568 221 44% 199 278 78 39% 121 123 42 35%
Eukaryotic Chloroplast   GC/CG AU/UA GU/UG
C1 M P A C M P A C M P A
Alnus incana M75719 M75722 478 509 214 45% 194 247 83 43% 100 114 57 57%
Astasia longa X14386 304 289 85 28% 411 501 72 18% 111 152 25 23%
Chlamydomonas eugametos Z17234 429 484 122 28% 283 362 70 25% 109 120 32 29%
Chlamydomonas frankii L43352 X68905 X68906 X68907 X68908 X68909 Z17230 431 442 145 34% 236 305 71 30% 103 129 35 34%
Chlamydomonas geitleri L43353 X68891 X68892 Z15153 427 436 153 36% 264 302 89 34% 94 116 36 38%
Chlamydomonas gelatinosa Z15151 436 447 186 43% 240 294 89 37% 99 116 40 40%
Chlamydomonas humicola L42989 X68921 X68922 Z17235 426 439 142 33% 247 308 88 36% 100 128 38 38%
Chlamydomonas indica X68893 X68894 X68895 X68896 X68897 X68898 Z17228 428 465 124 29% 281 351 71 25% 109 120 32 29%
Chlamydomonas iyengarii L43354 X68885 X68886 Z15148 432 461 190 44% 242 305 95 39% 101 117 45 45%
Chlamydomonas komma L43502 X68927 X68928 X68929 Z17237 432 457 184 43% 238 308 95 40% 105 117 47 45%
Chlamydomonas mexicana L49148 X68910 X68911 X68912 Z17231 428 448 167 39% 249 305 96 39% 105 111 32 30%
Chlamydomonas pallidostigmatica L43503 X68899 X68900 X68901 X68902 X68903 X68904 Z17229 435 480 205 47% 258 359 120 47% 123 137 67 54%
Chlamydomonas peterfii L43538 X68887 X68888 Z15149 424 444 163 38% 252 330 108 43% 103 127 43 42%
Chlamydomonas pitschmannii Z15152 422 459 181 43% 259 342 114 44% 101 121 48 48%
Chlamydomonas reinhardtii X15727 X16686 X16687 459 455 169 37% 249 295 106 43% 97 128 42 43%
Chlamydomonas sp. SAG 66.72 L43539 X68923 X68924 X68925 X68926 Z17236 443 477 185 42% 268 349 115 43% 98 120 32 33%
Chlamydomonas starrii L43504 X68889 X68890 Z15150 430 493 175 41% 244 304 95 39% 103 129 41 40%
Chlamydomonas zebra L43356 Z17233 432 470 189 44% 243 302 89 37% 99 117 43 43%
Chlorella ellipsoidea M36158 422 516 180 43% 252 346 108 43% 98 128 42 43%
Conopholis americana X59768 X58863 452 499 109 24% 191 266 43 23% 103 98 21 20%
Epifagus virginiana X62099 463 511 143 31% 188 263 50 27% 106 101 29 27%
Euglena gracilis X12890 X13310 364 359 137 38% 329 364 115 35% 112 128 35 31%
Marchantia polymorpha X04465 458 482 183 40% 207 271 88 43% 109 117 43 39%
Nicotiana tabacum Z00044 484 505 185 38% 194 253 65 34% 104 124 41 39%
Odontella sinensis Z67753 385 407 145 38% 286 342 103 36% 106 120 39 37%
Oryza sativa X15901 490 521 134 27% 196 271 55 28% 108 114 27 25%
Palmaria palmata Z18289 424 427 179 42% 258 304 108 42% 97 125 51 53%
Pisum sativum X55033 M37430 466 497 144 31% 203 264 63 31% 107 103 29 27%
Plasmodium falciparum (plastid-like) X61660 X95275 141 130 35 25% 565 634 117 21% 37 83 5 14%
Toxoplasma gondii (plastid-like) U18086 236 261 92 39% 400 507 194 49% 57 95 17 30%
Zea mays Z00028 511 532 193 38% 198 255 73 37% 105 118 40 38%
Eukaryotic Mitochondrion   GC/CG AU/UA GU/UG
C1 M P A C M P A C M P A
Acanthamoeba castellanii U03732 246 244 90 37% 386 448 105 27% 89 142 30 34%
Aedes albopictus X01078 45 47 13 29% 232 347 47 20% 30 61 8 27%
Albinaria caerulea X83390 61 81 33 54% 165 210 54 33% 16 28 4 25%
Albinaria turrita X71393 X71394 62 79 12 19% 150 196 23 15% 27 45 4 15%
Allomyces macrogynus U41288 328 403 143 44% 334 445 127 38% 73 121 25 34%
Antilocapra americana M55540 157 173 64 41% 158 184 45 28% 20 38 5 25%
Apis mellifera L06178 37 48 9 24% 233 342 50 21% 28 53 9 32%
Artemia salina X12965 102 115 15 15% 131 173 20 15% 25 42 3 12%
Ascaris suum X54253 36 45 7 19% 120 198 21 18% 38 63 4 11%
Aspergillus nidulans J01390 X06961 239 256 113 47% 361 609 165 46% 70 106 31 44%
Balaenoptera musculus X72204 148 169 54 36% 164 207 53 32% 17 34 5 29%
Bos taurus J01394 157 176 36 23% 158 205 32 20% 17 32 2 12%
Cacozeliana lacertina AF101007 130 155 43 33% 145 203 43 30% 30 47 6 20%
Caenorhabditis elegans X54252 44 47 16 36% 139 208 35 25% 18 33 1 6%
Cafeteria roenbergensis AF193903 266 276 129 48% 346 371 154 45% 73 120 41 56%
Capra hircus M55541 143 173 61 43% 139 220 60 43% 16 31 7 44%
Cepaea nemoralis U23045 84 139 24 29% 99 180 19 19% 31 57 8 26%
Cervus unicolor M35875 138 158 43 31% 139 238 56 40% 19 35 4 21%
Chlamydomonas eugametos AF008237 172 200 54 31% 231 282 83 36% 55 67 8 15%
Chlamydomonas reinhardtii X54860 U03843 228 340 99 43% 167 278 68 41% 43 81 16 37%
Chondrus crispus Z46224 Z47547 206 217 93 45% 403 466 163 40% 52 86 19 37%
Crithidia fasciculata X02548 27 40 1 4% 102 281 1 1% 15 41 0 0%
Crithidia oncopelti X51736 23 35 0 0% 95 274 0 0% 15 46 0 0%
Crossostoma lacustre M91245 194 221 75 39% 120 184 42 35% 18 26 7 39%
Damaliscus pygargus M86499 159 172 64 40% 160 204 59 37% 17 37 8 47%
Dictyostelium discoideum D16466 242 266 75 31% 349 463 92 26% 82 104 18 22%
Didelphis virginiana Z29573 146 150 52 36% 175 211 46 26% 16 31 4 25%
Drosophila melanogaster X53506 42 50 20 48% 237 326 36 15% 24 55 8 33%
Drosophila yakuba X03240 42 54 19 45% 215 309 33 15% 25 44 8 32%
Equus caballus X79547 150 169 53 35% 171 234 62 36% 18 28 7 39%
Euhadra herklotsi Z71693 62 75 21 34% 133 187 26 20% 29 40 4 14%
Gallus gallus X52392 170 204 49 29% 133 179 33 25% 18 27 4 22%
Homo sapiens D38112 159 171 53 33% 143 180 48 34% 19 34 6 32%
Hydropotes inermis M35876 138 166 65 47% 141 215 65 46% 18 34 10 56%
Katharina tunicata U09810 76 81 11 14% 187 230 27 14% 18 40 6 33%
Leishmania tarentolae X02354 23 38 2 9% 103 298 5 5% 16 33 0 0%
Leptomonas sp. J03814 23 44 0 0% 99 280 0 0% 12 38 0 0%
Locusta migratoria X80245 65 71 18 28% 191 289 36 19% 30 59 7 23%
Loligo bleekeri AB009838 59 71 11 19% 175 273 34 19% 55 84 8 15%
Lumbricus terrestris U24570 100 124 45 45% 138 176 49 36% 16 22 6 38%
Marchantia polymorpha M68929 386 430 139 36% 252 331 105 42% 67 96 24 36%
Meloidogyne javanica L76261 11 29 0 0% 108 403 6 6% 20 76 0 0%
Muntiacus reevesi M35877 151 158 36 24% 192 220 26 14% 26 33 5 19%
Mus musculus J01420 141 158 41 29% 175 232 48 27% 19 33 6 32%
Mytilus edulis M83756 95 112 23 24% 156 205 22 14% 37 73 8 22%
Neurospora crassa X55443 255 353 108 42% 358 579 155 43% 65 133 34 52%
Ochromonas danica AF287134 237 241 109 46% 371 424 143 39% 84 109 35 42%
Odocoileus virginianus M35874 140 172 46 33% 145 215 45 31% 18 34 7 39%
Oenothera berteriana X02559 383 528 136 36% 212 347 69 33% 73 129 21 29%
Pan troglodytes D38113 153 172 51 33% 145 178 39 27% 19 29 7 37%
Paracentrotus lividus J04815 143 176 55 38% 158 206 37 23% 25 38 6 24%
Paracrostoma paludiformis AF101008 103 131 29 28% 164 229 33 20% 29 43 7 24%
Paramecium primaurelia K00634 218 273 71 33% 312 404 80 26% 68 131 20 29%
Paramecium tetraurelia K01749 230 268 116 50% 331 413 163 49% 75 105 29 39%
Pecten maximus X92688 117 152 21 18% 114 189 13 11% 63 97 6 10%
Penicillium chrysogenum D13859 S56867 248 280 82 33% 354 654 112 32% 68 125 21 31%
Phoca vitulina X63726 155 176 54 35% 155 195 54 35% 18 33 8 44%
Physarum polycephalum AF080601 229 274 67 29% 354 467 106 30% 63 98 14 22%
Pichia canadensis D31785 147 156 42 29% 471 676 178 38% 54 85 16 30%
Podospora anserina X14735 X55026 256 377 94 37% 358 626 136 38% 70 157 26 37%
Porphyra purpurea AF114794 262 283 87 33% 350 402 102 29% 51 91 20 39%
Prototheca wickerhamii X68722 307 337 168 55% 336 455 192 57% 73 106 43 59%
Pylaiella littoralis Z48620 330 366 86 26% 252 325 74 29% 86 91 23 27%
Pyura stolonifera X74513 44 98 6 14% 124 294 23 19% 38 98 3 8%
Rana catesbeiana X12841 140 185 66 47% 137 205 64 47% 16 28 6 38%
Rattus norvegicus J01438 127 164 24 19% 129 198 22 17% 18 32 4 22%
Reclinomonas americana AF007261 347 343 133 38% 316 368 142 45% 79 111 33 42%
Rhizopus stolonifer NPA 316 387 157 50% 284 410 134 47% 76 108 28 37%
Rhodomonas salina AF288090 195 187 68 35% 444 505 149 34% 58 98 16 28%
Saccharomyces cerevisiae J01527 150 178 40 27% 453 740 85 19% 56 94 9 16%
Sceloporus undulatus L28075 163 180 45 28% 128 171 38 30% 16 24 2 13%
Schizosaccharomyces pombe X06597 236 262 107 45% 384 487 149 39% 60 96 28 47%
Strongylocentrotus purpuratus X12631 119 177 45 38% 107 209 21 20% 20 36 1 5%
Suillus sinuspaulianus L47585 268 358 82 31% 343 794 92 27% 78 165 19 24%
Tetrahymena pyriformis M58010 188 202 108 57% 429 525 183 43% 50 94 24 48%
Tetrahymena pyriformis M58011 187 196 101 54% 425 517 178 42% 45 98 24 53%
Tragulus napu M55539 143 179 60 42% 140 200 53 38% 20 35 10 50%
Triticum aestivum Z11889 Z14078 383 593 146 38% 212 344 88 42% 73 124 26 36%
Trypanosoma brucei X02547 22 38 1 5% 99 274 9 9% 16 53 2 13%
Xenopus laevis M10217 167 184 54 32% 155 211 51 33% 19 39 9 47%
Zea mays K01868 388 583 115 30% 215 358 53 25% 74 134 18 24%
Eukaryotic Mitochondrion   GC/CG AU/UA GU/UG
C1 M P A C M P A C M P A
Aedes albopictus L22060 487 747 228 47% 326 454 147 45% 111 158 36 32%
Arabidopsis thaliana X52320 569 671 274 48% 245 307 100 41% 116 152 43 37%
Babesia bigemina NPA 469 598 143 30% 243 338 68 28% 93 148 26 28%
Brassica napus D10840 550 633 224 41% 261 322 91 35% 116 141 38 33%
Caenorhabditis elegans X03680 501 580 278 55% 329 403 165 50% 142 176 71 50%
Candida albicans L28817 466 526 181 39% 332 395 105 32% 159 179 55 35%
Chlorella ellipsoidea D17810 D13340 539 596 306 57% 305 347 138 45% 101 130 45 45%
Crithidia fasciculata Y00055 469 665 203 43% 267 412 83 31% 123 187 49 40%
Dictyostelium discoideum X00601 V00189 353 450 199 56% 315 451 176 56% 140 170 67 48%
Didymium iridis X60210 523 677 207 40% 260 336 92 35% 167 187 61 37%
Drosophila melanogaster M21017 X15707 413 531 158 38% 440 638 222 50% 106 162 38 36%
Encephalitozoon cuniculi AJ005581 314 387 126 40% 155 232 63 41% 140 170 39 28%
Entamoeba histolytica X65163 295 348 116 39% 468 586 245 52% 99 152 46 46%
Euglena gracilis X53361 544 742 113 21% 264 382 47 18% 152 157 24 16%
Filobasidiella neoformans var. bacillispora L14067 497 545 262 53% 333 389 152 46% 142 168 71 50%
Fragaria x ananassa X15589 X58118 555 656 168 30% 237 308 63 27% 119 136 29 24%
Giardia ardeae X58290 582 716 183 31% 123 141 40 33% 45 76 10 22%
Giardia intestinalis X52949 647 796 226 35% 87 89 22 25% 40 54 9 23%
Giardia muris X65063 465 540 169 36% 202 276 79 39% 72 87 20 28%
Herdmania momus X53538 519 724 199 38% 249 333 61 24% 124 142 33 27%
Hexamita inflata NPA 414 537 199 48% 216 290 92 43% 93 121 37 40%
Homo sapiens J01866 M11167 624 1297 200 32% 229 301 64 28% 101 173 23 23%
Lycopersicon esculentum X13557 X52265 585 679 253 43% 241 319 90 37% 118 132 36 31%
Microsporidium 57864 U90885 205 233 73 36% 329 401 107 33% 83 130 21 25%
Mucor racemosus M26190 383 440 167 44% 379 455 175 46% 129 150 61 47%
Mus musculus J01871 X00525 628 1153 220 35% 229 298 69 30% 105 187 21 20%
Naegleria gruberi Thesis, Mullican J. 428 540 215 50% 335 465 183 55% 128 160 59 46%
Nosema apis U76706 216 251 87 40% 319 420 146 46% 76 118 29 38%
Nosema apis U97150 213 245 62 29% 328 404 97 30% 74 127 20 27%
Oryza sativa M11585 M16845 M35384 M82048 M19228 619 724 231 37% 230 281 68 30% 92 127 30 33%
Physarum polycephalum V01159 V01160 544 696 177 33% 272 370 69 25% 131 160 35 27%
Phytophthora megasperma X75631 X75632 488 617 274 56% 321 420 166 52% 153 204 83 54%
Plasmodium falciparum (A gene) U21939 400 455 179 45% 493 608 278 56% 105 144 42 40%
Plasmodium falciparum (S gene) U48228 373 413 132 35% 558 736 233 42% 139 216 51 37%
Plasmodium vivax (A gene) NPA 411 485 157 38% 485 614 229 47% 114 173 42 37%
Plasmodium vivax (O gene) NPA 389 562 147 38% 404 645 201 50% 125 191 41 33%
Plasmodium vivax (S gene) NPA 374 727 96 26% 357 752 107 30% 99 268 17 17%
Pneumocystis carinii M86760 468 511 267 57% 352 413 177 50% 146 162 70 48%
Prorocentrum micans M14649 M19230 X15973 437 540 168 38% 311 413 119 38% 122 165 28 23%
Rattus norvegicus J01881 V01270 J01438 422 1196 156 37% 208 296 72 35% 86 174 26 30%
Saccharomyces cerevisiae U53879 501 531 248 50% 350 413 167 48% 154 171 70 45%
Schizosaccharomyces japonicus Z32848 463 521 215 46% 365 429 150 41% 140 159 56 40%
Schizosaccharomyces pombe J01359 Z19136 X51920 477 549 215 45% 367 436 147 40% 149 166 53 36%
Sinapis alba X15915 X57137 564 654 242 43% 258 320 96 37% 118 137 34 29%
Tetrahymena thermophila X54512 438 510 232 53% 383 431 196 51% 118 141 55 47%
Theileria parva L28036 L28998 L26332 L26331 448 542 215 48% 279 369 133 48% 114 146 47 41%
Toxoplasma gondii (P) X75453 465 556 241 52% 332 413 171 52% 108 149 51 47%
Trepomonas agilis AF015455 295 388 124 42% 238 317 84 35% 88 115 27 31%
Trypanosoma brucei X05682 X14553 X04986 475 703 121 25% 254 410 55 22% 124 187 28 23%
Vairimorpha necatrix NPA 200 228 76 38% 355 445 155 44% 80 115 28 35%
Xenopus laevis X59734 625 990 223 36% 222 283 61 27% 111 153 21 19%
Zea mays NPA 407 712 150 37% 204 276 64 31% 74 106 17 23%
  1. C, Number of comparatively predicted base-pairs; M, Number of base-pairs in the MFold optimal structure prediction; P, Number of comparative base-pairs predicted correctly in the MFold optimal structure prediction.
  2. NPA, Not Publically Available - The sequence used for analysis has not been deposited in Genbank.