Comparative RNA Web Site and Project The Gutell Lab

Paired to Unpaired Nucelotide Ratios for tRNA Secondary Structures Predicted by Comparative Analysis and MFold 3.1

Archaea		Paired		Unpaired		Ratio1		A2				G				C				U
		C	M	C	M	C	M	PC	UPC	PM	UPM	PC	UPC	PM	UPM	PC	UPC	PM	UPM	PC	UPC	PM	UPM
Archaeoglobus fulgidus (Ala:A)	AE000965	44	54	28	18	61%/39%	75%/25%	3	8	4	7	20	8	23	5	18	5	19	4	3	7	8	2
Halobacterium salinarum (His:H)	X03198	44	52	31	23	59%/41%	69%/31%	3	7	6	4	18	8	20	6	15	6	16	5	8	10	10	8
Halobacterium salinarum (Asn:N)	X03195	44	40	32	36	58%/42%	53%/47%	5	7	3	9	17	8	17	8	17	5	17	5	5	12	3	14
Halobacterium salinarum (Gln:Q)	X03196	44	46	31	29	59%/41%	61%/39%	6	8	6	8	15	8	17	6	14	7	14	7	9	8	9	8
Halobacterium salinarum (Val:V)	K02505	44	54	34	24	56%/44%	69%/31%	6	10	7	9	16	6	20	2	16	8	17	7	6	10	10	6
Halobacterium salinarum (Val:V)	K00244	44	52	34	26	56%/44%	67%/33%	6	10	7	9	16	7	19	4	16	7	16	7	6	10	10	6
Halobacterium sp. NRC-1 (Ala:A)	AE005128	44	52	28	20	61%/39%	72%/28%	5	8	7	6	18	6	19	5	15	4	14	5	6	10	12	4
Halobacterium sp. NRC-1 (Cys:C)	AE005128	44	40	32	36	58%/42%	53%/47%	4	8	2	10	19	6	18	7	18	8	18	8	3	10	2	11
Halobacterium sp. NRC-1 (Gly:G)	AE005077	44	36	30	38	59%/41%	49%/51%	5	11	4	12	16	4	14	6	16	6	14	8	7	9	4	12
Halobacterium sp. NRC-1 (Arg:R)	AE004980	44	54	32	22	58%/42%	71%/29%	3	10	7	6	18	8	20	6	16	6	17	5	7	8	10	5
Haloferax volcanii (Ala:A)	K02507	44	48	31	27	59%/41%	64%/36%	6	10	5	11	17	6	19	4	15	8	14	9	6	7	10	3
Haloferax volcanii (Ala:A)	K02506	44	42	31	33	59%/41%	56%/44%	6	9	2	13	17	8	19	6	16	6	16	6	5	8	5	8
Haloferax volcanii (Ala:A)	K02508	44	44	31	31	59%/41%	59%/41%	5	9	5	9	18	6	17	7	15	6	15	6	6	10	7	9
Haloferax volcanii (Cys:C)	X02584	44	40	36	40	55%/45%	50%/50%	7	8	3	12	17	6	17	6	17	14	17	14	3	8	3	8
Haloferax volcanii (Asp:D)	K00170	44	46	32	30	58%/42%	61%/39%	3	8	3	8	18	7	20	5	16	10	16	10	7	7	7	7
Haloferax volcanii (Glu:E)	K00190	44	40	34	38	56%/44%	51%/49%	7	9	6	10	14	6	14	6	12	12	11	13	11	7	9	9
Haloferax volcanii (Glu:E)	X02510	44	38	33	39	57%/43%	49%/51%	5	10	5	10	16	6	14	8	14	10	13	11	9	7	6	10
Haloferax volcanii (Phe:F)	K02511	44	46	32	30	58%/42%	61%/39%	5	12	6	11	17	6	17	6	18	6	15	9	4	8	8	4
Haloferax volcanii (Gly:G)	K02515	44	44	30	30	59%/41%	59%/41%	4	9	4	9	19	5	18	6	18	7	18	7	3	9	4	8
Haloferax volcanii (Gly:G)	K02513	44	36	30	38	59%/41%	49%/51%	5	11	4	12	16	4	14	6	16	6	14	8	7	9	4	12
Haloferax volcanii (Gly:G)	X02514	44	40	29	33	60%/40%	55%/45%	7	9	5	11	15	4	15	4	15	6	14	7	7	10	6	11
Haloferax volcanii (His:H)	K02516	44	54	32	22	58%/42%	71%/29%	4	8	7	5	17	8	20	5	14	6	12	8	9	10	15	4
Haloferax volcanii (Ile:I)	K00219	44	42	33	35	57%/43%	55%/45%	4	11	2	13	19	6	19	6	17	7	17	7	4	9	4	9
Haloferax volcanii (Lys:K)	X02518	44	46	31	29	59%/41%	61%/39%	4	9	4	9	18	6	19	5	17	6	17	6	5	10	6	9
Haloferax volcanii (Pro:P)	K02521	44	46	30	28	59%/41%	62%/38%	4	7	3	8	17	10	20	7	15	5	15	5	8	8	8	8
Haloferax volcanii (Pro:P)	K02522	44	44	32	32	58%/42%	58%/42%	2	8	1	9	18	8	21	5	17	7	18	6	7	9	4	12
Haloferax volcanii (Gln:Q)	K00183	44	48	32	28	58%/42%	63%/37%	6	8	5	9	15	9	19	5	14	7	13	8	9	8	11	6
Haloferax volcanii (Arg:R)	K00154	44	50	32	26	58%/42%	66%/34%	5	10	8	7	16	8	17	7	15	6	13	8	8	8	12	4
Haloferax volcanii (Arg:R)	X02524	44	44	32	32	58%/42%	58%/42%	5	10	6	9	17	5	16	6	14	9	14	9	8	8	8	8
Haloferax volcanii (Thr:T)	K02526	44	46	31	29	59%/41%	61%/39%	7	9	8	8	16	5	15	6	15	7	15	7	6	10	8	8
Haloferax volcanii (Thr:T)	K02525	44	46	31	29	59%/41%	61%/39%	5	10	6	9	18	6	17	7	16	6	16	6	5	9	7	7
Haloferax volcanii (Val:V)	K02527	44	46	33	31	57%/43%	60%/40%	5	9	4	10	17	6	19	4	16	10	18	8	6	8	5	9
Haloferax volcanii (Val:V)	K00245	44	48	34	30	56%/44%	62%/38%	7	9	5	11	15	7	19	3	15	7	18	4	7	11	6	12
Haloferax volcanii (Trp:W)	K02528	44	44	30	30	59%/41%	59%/41%	4	9	3	10	18	6	19	5	16	9	16	9	6	6	6	6
Haloferax volcanii (Tyr:Y)	K00268	44	40	32	36	58%/42%	53%/47%	5	10	3	12	17	5	17	5	17	8	17	8	5	9	3	11
Methanobacterium formicicum (Asp:D)	AF443995	44	40	30	34	59%/41%	54%/46%	5	5	3	7	18	9	17	10	15	5	15	5	6	11	5	12
Methanocaldococcus jannaschii (Glu:E)	U67517	44	44	31	31	59%/41%	59%/41%	3	9	2	10	18	6	20	4	16	8	17	7	7	8	5	10
Methanocaldococcus jannaschii (Phe:F)	U67517	44	42	30	32	59%/41%	57%/43%	7	9	6	10	15	8	15	8	14	5	13	6	8	8	8	8
Methanocaldococcus jannaschii (His:H)	U67517	44	48	31	27	59%/41%	64%/36%	4	8	7	5	17	7	17	7	15	7	16	6	8	9	8	9
Methanocaldococcus jannaschii (Ile:I)	U67517	44	48	31	27	59%/41%	64%/36%	4	10	4	10	18	6	20	4	15	5	16	4	7	10	8	9
Methanocaldococcus jannaschii (Pro:P)	U67537	44	44	33	33	57%/43%	57%/43%	4	9	4	9	17	8	18	7	14	7	16	5	9	9	6	12
Methanocaldococcus jannaschii (Gln:Q)	U67528	44	48	29	25	60%/40%	66%/34%	5	9	6	8	16	7	18	5	14	5	14	5	9	8	10	7
Methanocaldococcus jannaschii (Arg:R)	U67492	44	44	31	31	59%/41%	59%/41%	1	9	2	8	21	6	20	7	19	5	16	8	3	11	6	8
Methanocaldococcus jannaschii (Thr:T)	U67528	44	50	30	24	59%/41%	68%/32%	5	7	6	6	18	8	19	7	17	6	18	5	4	9	7	6
Methanocaldococcus jannaschii (Val:V)	U67538	44	48	30	26	59%/41%	65%/35%	5	8	4	9	17	7	20	4	15	5	17	3	7	10	7	10
Methanococcus maripaludis (Lys:K)	AF108356	44	40	30	34	59%/41%	54%/46%	4	7	4	7	18	7	16	9	16	4	16	4	6	12	4	14
Methanococcus vannielii (Ala:A)	X00083	44	42	29	31	60%/40%	58%/42%	3	9	2	10	20	7	19	8	17	5	17	5	4	8	4	8
Methanococcus vannielii (Asp:D)	X00916	44	52	31	23	59%/41%	69%/31%	5	7	6	6	16	7	20	3	14	9	17	6	9	8	9	8
Methanococcus vannielii (Pro:P)	X00916	44	46	34	32	56%/44%	59%/41%	4	9	4	9	17	8	19	6	14	8	16	6	9	9	7	11
Methanococcus vannielii (Thr:T)	X00916	44	40	32	36	58%/42%	53%/47%	10	11	7	14	14	6	13	7	12	5	12	5	8	10	8	10
Methanococcus vannielii (Thr:T)	X00916	44	42	28	30	61%/39%	58%/42%	9	10	7	12	14	6	14	6	13	2	13	2	8	10	8	10
Methanococcus vannielii (Thr:T)	X00916	44	48	30	26	59%/41%	65%/35%	4	6	4	6	18	8	20	6	17	5	18	4	5	11	6	10
Methanococcus vannielii (Tyr:Y)	X00916	44	42	30	32	59%/41%	57%/43%	5	10	4	11	18	6	17	7	16	3	16	3	5	11	5	11
Methanosaeta concilii (Ala:A)	X51423	44	48	29	25	60%/40%	66%/34%	5	8	5	8	18	7	19	6	16	6	16	6	5	8	8	5
Methanospirillum hungatei (Ala:A)	M19342	44	46	29	27	60%/40%	63%/37%	3	10	4	9	20	6	19	7	17	5	16	6	4	8	7	5
Methanothermobacter thermautotrophicus (Ala:A)	AE000940	44	40	30	34	59%/41%	54%/46%	2	10	1	11	21	7	19	9	18	6	18	6	3	7	2	8
Methanothermobacter thermautotrophicus (Gly:G)	X06787	44	42	34	36	56%/44%	54%/46%	5	9	3	11	17	4	18	3	19	11	16	14	3	10	5	8
Methanothermobacter thermautotrophicus (Asn:N)	X06788	44	56	33	21	57%/43%	73%/27%	3	9	5	7	19	5	23	1	19	8	20	7	3	11	8	6
Methanothermus fervidus (Ala:A)	M32222	44	46	30	28	59%/41%	62%/38%	3	9	2	10	20	7	21	6	18	7	17	8	3	7	6	4
Methanothermus fervidus (Asp:D)	M26977	44	42	28	30	61%/39%	58%/42%	2	6	2	6	19	8	19	8	17	5	16	6	6	9	5	10
Methanothermus fervidus (Glu:E)	M26978	44	54	31	21	59%/41%	72%/28%	5	9	7	7	16	6	20	2	15	9	18	6	8	7	9	6
Methanothermus fervidus (Ile:I)	M26978	44	40	30	34	59%/41%	54%/46%	4	10	3	11	18	6	17	7	17	6	17	6	5	8	3	10
Methanothermus fervidus (Lys:K)	M26977	44	44	30	30	59%/41%	59%/41%	3	9	3	9	19	5	19	5	17	4	17	4	5	12	5	12
Methanothermus fervidus (Asn:N)	M26978	44	42	30	32	59%/41%	57%/43%	3	7	3	7	19	10	18	11	18	3	17	4	4	10	4	10
Methanothermus fervidus (Pro:P)	M26977	44	48	31	27	59%/41%	64%/36%	2	9	5	6	19	7	19	7	16	5	17	4	7	10	7	10
Methanothermus fervidus (Thr:T)	M26977	44	50	29	23	60%/40%	68%/32%	4	8	5	7	18	6	20	4	17	4	18	3	5	11	7	9
Pyrobaculum aerophilum (Ala:A)	AE009773	44	42	28	30	61%/39%	58%/42%	2	8	1	9	21	7	20	8	18	7	17	8	3	6	4	5
Pyrobaculum aerophilum (Ala:A)	AE009773	44	42	28	30	61%/39%	58%/42%	2	8	1	9	21	7	20	8	18	6	16	8	3	7	5	5
Sulfolobus solfataricus (Phe:F)	AE006696	44	52	30	22	59%/41%	70%/30%	1	9	4	6	21	8	22	7	20	6	18	8	2	7	8	1
Sulfolobus solfataricus (Val:V)	X06054	44	48	31	27	59%/41%	64%/36%	4	8	5	7	19	6	19	6	17	8	18	7	4	9	6	7
Thermococcus sp. MZ12 (Ala:A)	AY017180	44	54	33	23	57%/43%	70%/30%	3	9	5	7	20	8	22	6	18	8	18	8	3	8	9	2
Thermofilum pendens (Gly:G)	X14835	44	40	33	37	57%/43%	52%/48%	2	12	1	13	21	4	19	6	18	10	16	12	3	7	4	6
Thermofilum pendens (Met:M)	X14835	44	52	35	27	56%/44%	66%/34%	1	10	4	7	21	4	22	3	19	11	19	11	3	10	7	6
Thermofilum pendens (Met:M)	X14835	44	42	30	32	59%/41%	57%/43%	5	7	5	7	17	9	16	10	14	6	16	4	8	8	5	11
Thermofilum pendens (Met:M)	X14835	44	44	33	33	57%/43%	57%/43%	5	8	6	7	17	8	16	9	14	8	16	6	8	9	6	11
Thermoplasma acidophilum (Met:M)	K00302	44	50	31	25	59%/41%	67%/33%	4	8	5	7	19	7	20	6	17	8	18	7	4	8	7	5
Bacteria		Paired		Unpaired		Ratio1		A2				G				C				U
		C	M	C	M	C	M	PC	UPC	PM	UPM	PC	UPC	PM	UPM	PC	UPC	PM	UPM	PC	UPC	PM	UPM
Acholeplasma laidlawii (Trp:W)	X15508	44	44	31	31	59%/41%	59%/41%	5	10	6	9	16	6	16	6	13	8	13	8	10	7	9	8
Acidithiobacillus ferrooxidans (Ala:A)	X07395	44	50	32	26	58%/42%	66%/34%	5	9	7	7	18	9	18	9	15	5	17	3	6	9	8	7
Aeromonas hydrophila (His:H)	X12977	44	42	32	34	58%/42%	55%/45%	5	6	5	6	16	8	16	8	15	6	14	7	8	12	7	13
Aeromonas hydrophila (Pro:P)	X12977	44	48	33	29	57%/43%	62%/38%	9	8	8	9	14	9	16	7	13	7	14	6	8	9	10	7
Aeromonas hydrophila (Arg:R)	X12977	44	42	33	35	57%/43%	55%/45%	5	9	4	10	18	8	17	9	17	8	17	8	4	8	4	8
Agrobacterium tumefaciens str. C58 (U. Washington) (Ala:A)	AE009341	44	46	32	30	58%/42%	61%/39%	7	8	8	7	16	9	15	10	14	7	14	7	7	8	9	6
Bacillus halodurans (Trp:W)	AP001510	44	44	30	30	59%/41%	59%/41%	8	9	6	11	14	6	16	4	13	7	12	8	9	8	10	7
Bacillus megaterium (Glu:E)	AF142677	44	36	28	36	61%/39%	50%/50%	6	8	3	11	17	5	15	7	16	6	14	8	5	9	4	10
Bacillus megaterium (Lys:K)	AF142677	44	44	32	32	58%/42%	58%/42%	10	8	7	11	13	7	15	5	12	5	12	5	9	12	10	11
Bacillus megaterium (Lys:K)	AF142677	44	40	31	35	59%/41%	53%/47%	10	7	8	9	13	7	12	8	12	5	12	5	9	12	8	13
Bacillus megaterium (Lys:K)	AF142677	44	40	31	35	59%/41%	53%/47%	10	8	8	10	13	7	12	8	12	4	12	4	9	12	8	13
Bacillus megaterium (Arg:R)	AF142677	44	42	33	35	57%/43%	55%/45%	7	9	4	12	16	8	17	7	14	6	12	8	7	10	9	8
Bacillus sporothermodurans (Ala:A)	AF071855	44	40	32	36	58%/42%	53%/47%	5	7	3	9	18	8	17	9	16	8	16	8	5	9	4	10
Bacillus subtilis (Ala:A)	K00141	44	40	32	36	58%/42%	53%/47%	6	7	4	9	17	8	16	9	16	8	16	8	5	9	4	10
Bacillus subtilis (Cys:C)	Z99108	44	36	30	38	59%/41%	49%/51%	6	10	2	14	17	5	16	6	15	6	15	6	6	9	3	12
Bacillus subtilis (Phe:F)	K00637	44	46	32	30	58%/42%	61%/39%	5	10	6	9	18	6	17	7	16	5	16	5	5	11	7	9
Bacillus subtilis (Gly:G)	K00637	44	46	30	28	59%/41%	62%/38%	6	8	7	7	17	7	16	8	15	6	15	6	6	9	8	7
Bacillus subtilis (Gly:G)	K00637	44	38	30	36	59%/41%	51%/49%	7	7	5	9	14	5	14	5	14	7	13	8	9	11	6	14
Bacillus subtilis (Gly:G)	Z99108	44	38	30	36	59%/41%	51%/49%	8	7	6	9	13	5	13	5	13	7	12	8	10	11	7	14
Bacillus subtilis (His:H)	Z99108	44	48	32	28	58%/42%	63%/37%	8	5	8	5	15	8	16	7	14	7	13	8	7	12	11	8
Bacillus subtilis (His:H)	K00637	44	48	32	28	58%/42%	63%/37%	8	5	8	5	15	8	16	7	14	6	13	7	7	13	11	9
Bacillus subtilis (Ile:I)	K00637	44	48	33	29	57%/43%	62%/38%	8	9	8	9	14	7	16	5	15	6	13	8	7	11	11	7
Bacillus subtilis (Ile:I)	Z99104	44	50	32	26	58%/42%	66%/34%	5	10	6	9	17	6	19	4	16	6	15	7	6	10	10	6
Bacillus subtilis (Ile:I)	Z99104	44	52	33	25	57%/43%	68%/32%	5	9	7	7	18	8	19	7	16	6	16	6	5	10	10	5
Bacillus subtilis (Ile:I)	K00637	44	52	33	25	57%/43%	68%/32%	6	9	8	7	17	8	18	7	15	6	15	6	6	10	11	5
Bacillus subtilis (Ile:I)	Z99104	44	46	33	31	57%/43%	60%/40%	7	9	6	10	16	8	17	7	15	7	16	6	6	9	7	8
Bacillus subtilis (Met:M)	K00637	44	48	33	29	57%/43%	62%/38%	8	9	8	9	14	7	16	5	15	6	13	8	7	11	11	7
Bacillus subtilis (Met:M)	K00637	44	46	32	30	58%/42%	61%/39%	3	8	3	8	20	6	20	6	15	8	16	7	6	10	7	9
Bacillus subtilis (Met:M)	K00297	44	50	32	26	58%/42%	66%/34%	3	8	5	6	20	6	20	6	15	9	16	8	6	9	9	6
Bacillus subtilis (Asn:N)	K00637	44	44	31	31	59%/41%	59%/41%	7	8	8	7	14	8	14	8	15	5	14	6	8	10	8	10
Bacillus subtilis (Pro:P)	K00637	44	54	33	23	57%/43%	70%/30%	7	8	7	8	16	9	20	5	14	5	15	4	7	11	12	6
Bacillus subtilis (Gln:Q)	Z99108	44	42	28	30	61%/39%	58%/42%	9	7	7	9	14	7	14	7	14	5	12	7	7	9	9	7
Bacillus subtilis (Arg:R)	K00156	44	42	32	34	58%/42%	55%/45%	7	9	6	10	16	8	15	9	15	6	15	6	6	9	6	9
Bacillus subtilis (Thr:T)	Z99104	44	42	29	31	60%/40%	58%/42%	9	8	7	10	14	9	14	9	14	4	14	4	7	8	7	8
Bacillus subtilis (Thr:T)	K00637	44	40	31	35	59%/41%	53%/47%	6	9	4	11	17	6	16	7	13	4	13	4	8	12	7	13
Bacillus subtilis (Val:V)	K00637	44	46	32	30	58%/42%	61%/39%	7	9	7	9	16	8	16	8	14	8	15	7	7	7	8	6
Campylobacter coli (Ala:A)	AF146727	44	42	32	34	58%/42%	55%/45%	6	7	5	8	16	8	16	8	15	8	15	8	7	9	6	10
Caulobacter crescentus (Ala:A)	L00194	44	50	31	25	59%/41%	67%/33%	3	9	6	6	18	6	19	5	16	5	13	8	7	11	12	6
Cyanophora paradoxa (Ala:A)	M19493	44	46	29	27	60%/40%	63%/37%	6	7	7	6	17	7	16	8	15	3	15	3	6	12	8	10
Cyanophora paradoxa (Glu:E)	U30821	44	42	28	30	61%/39%	58%/42%	5	8	5	8	17	5	16	6	15	8	15	8	7	7	6	8
Cyanophora paradoxa (Gly:G)	X51421	44	46	29	27	60%/40%	63%/37%	5	7	6	6	18	6	17	7	16	5	16	5	5	11	7	9
Cyanophora paradoxa (Ile:I)	M19493	44	42	33	35	57%/43%	55%/45%	6	10	5	11	17	7	16	8	16	5	16	5	5	11	5	11
Cyanophora paradoxa (Ile:I)	M19493	44	42	33	35	57%/43%	55%/45%	8	10	7	11	15	7	14	8	13	6	13	6	8	10	8	10
Cyanophora paradoxa (Ile:I)	M19493	44	40	33	37	57%/43%	52%/48%	7	9	5	11	16	9	15	10	14	5	14	5	7	10	6	11
Cyanophora paradoxa (Ile:I)	M19493	44	40	30	34	59%/41%	54%/46%	6	9	4	11	17	8	16	9	15	3	15	3	6	10	5	11
Cyanophora paradoxa (Ile:I)	M19493	44	44	30	30	59%/41%	59%/41%	10	11	10	11	13	5	12	6	11	2	11	2	10	12	11	11
Escherichia coli (Ala:A)	K00139	44	38	32	38	58%/42%	50%/50%	4	7	2	9	19	8	17	10	17	8	16	9	4	9	3	10
Escherichia coli (Asp:D)	AJ316554	44	48	33	29	57%/43%	62%/38%	5	9	6	8	18	8	18	8	14	7	15	6	7	9	9	7
Escherichia coli (Glu:E)	X05359	44	42	31	33	59%/41%	56%/44%	5	9	4	10	17	5	17	5	16	10	16	10	6	7	5	8
Escherichia coli (Glu:E)	K00188	44	42	32	34	58%/42%	55%/45%	4	9	3	10	18	5	18	5	16	11	17	10	6	7	4	9
Escherichia coli (Phe:F)	AF461394	44	46	32	30	58%/42%	61%/39%	5	10	6	9	18	6	17	7	16	5	16	5	5	11	7	9
Escherichia coli (Met:M)	K00296	44	38	33	39	57%/43%	49%/51%	9	10	5	14	14	6	14	6	14	6	12	8	7	11	7	11
Escherichia coli (Pro:P)	U00039	44	48	33	29	57%/43%	62%/38%	7	7	6	8	16	10	18	8	14	7	15	6	7	9	9	7
Escherichia coli (Arg:R)	K00152	44	48	32	28	58%/42%	63%/37%	6	10	7	9	16	7	17	6	16	7	16	7	6	8	8	6
Escherichia coli (Thr:T)	V00334	44	54	32	22	58%/42%	71%/29%	7	6	7	6	16	10	20	6	14	5	15	4	7	11	12	6
Escherichia coli K12 (Val:V)	AE000262	44	42	33	35	57%/43%	55%/45%	5	8	4	9	18	8	17	9	16	5	16	5	5	12	5	12
Geobacillus stearothermophilus (Phe:F)	K00332	44	42	32	34	58%/42%	55%/45%	6	10	5	11	17	6	16	7	15	6	15	6	6	10	6	10
Geobacillus stearothermophilus (Val:V)	K01065	44	46	32	30	58%/42%	61%/39%	7	8	7	8	16	10	16	10	14	7	14	7	7	7	9	5
Haemophilus influenzae Rd (Gly:G)	U32698	44	48	32	28	58%/42%	63%/37%	6	7	5	8	17	8	19	6	15	7	17	5	6	10	7	9
Lactobacillus delbrueckii (Asp:D)	X15246	44	36	29	37	60%/40%	49%/51%	6	7	4	9	16	6	14	8	16	6	14	8	6	10	4	12
Lactobacillus delbrueckii (Glu:E)	X15246	40	32	28	36	59%/41%	47%/53%	6	8	3	11	15	4	13	6	14	5	12	7	5	11	4	12
Lactobacillus delbrueckii (Asn:N)	X15245	44	40	28	32	61%/39%	56%/44%	8	6	6	8	15	7	14	8	13	3	13	3	8	12	7	13
Lactobacillus delbrueckii (Pro:P)	X15245	44	54	30	20	59%/41%	73%/27%	6	7	6	7	17	9	21	5	15	2	16	1	6	12	11	7
Lactobacillus delbrueckii (Arg:R)	X15246	44	48	30	26	59%/41%	65%/35%	9	11	9	11	15	6	15	6	12	4	11	5	8	9	13	4
Lactobacillus delbrueckii (Val:V)	X15246.1	44	44	29	29	60%/40%	60%/40%	9	8	7	10	14	8	15	7	13	6	14	5	8	7	8	7
Lactobacillus sakei (Gly:G)	AF401668	44	40	28	32	61%/39%	56%/44%	6	6	4	8	17	7	16	8	14	4	14	4	7	11	6	12
Mycobacterium tuberculosis CDC1551 (Val:V)	AE007103	44	40	28	32	61%/39%	56%/44%	8	8	6	10	15	7	14	8	14	7	13	8	7	6	7	6
Mycoplasma capricolum (Cys:C)	X16746	44	44	31	31	59%/41%	59%/41%	9	8	7	10	14	6	15	5	13	9	14	8	8	8	8	8
Mycoplasma capricolum (Asp:D)	X16745	44	42	33	35	57%/43%	55%/45%	5	7	4	8	18	8	17	9	16	7	16	7	5	11	5	11
Mycoplasma capricolum (Glu:E)	X16748	44	48	32	28	58%/42%	63%/37%	8	9	8	9	16	5	16	5	14	8	14	8	6	10	10	6
Mycoplasma capricolum (Gly:G)	X16749	44	54	30	20	59%/41%	73%/27%	7	8	11	4	15	4	16	3	12	6	12	6	10	12	15	7
Mycoplasma capricolum (His:H)	X16750	44	48	32	28	58%/42%	63%/37%	8	6	6	8	15	8	18	5	13	7	14	6	8	11	10	9
Mycoplasma capricolum (Lys:K)	X16756	44	48	32	28	58%/42%	63%/37%	9	9	8	10	15	5	16	4	12	7	13	6	8	11	11	8
Mycoplasma capricolum (Met:M)	X16758	44	42	33	35	57%/43%	55%/45%	6	10	5	11	17	5	16	6	15	6	15	6	6	12	6	12
Mycoplasma capricolum (Asn:N)	X16744	44	48	32	28	58%/42%	63%/37%	9	8	10	7	13	8	14	7	13	7	13	7	9	9	11	7
Mycoplasma capricolum (Gln:Q)	X16747	44	42	31	33	59%/41%	56%/44%	8	9	6	11	14	6	15	5	16	7	13	10	6	9	8	7
Mycoplasma capricolum (Thr:T)	X16764.1	44	42	32	34	58%/42%	55%/45%	12	11	10	13	11	6	11	6	10	5	9	6	11	10	12	9
Mycoplasma capricolum (Thr:T)	X16765	44	44	32	32	58%/42%	58%/42%	11	9	7	13	12	7	15	4	11	7	12	6	10	9	10	9
Mycoplasma capricolum (Thr:T)	X16764	44	40	29	33	60%/40%	55%/45%	6	7	4	9	17	7	16	8	14	3	14	3	7	12	6	13
Mycoplasma capricolum (Val:V)	X16769	44	46	32	30	58%/42%	61%/39%	8	10	9	9	13	7	14	6	14	7	13	8	9	8	10	7
Mycoplasma capricolum (Trp:W)	X16766	44	42	31	33	59%/41%	56%/44%	8	9	8	9	15	5	13	7	11	7	11	7	10	10	10	10
Mycoplasma capricolum (Trp:W)	X16767.1	44	48	30	26	59%/41%	65%/35%	7	8	8	7	14	5	16	3	10	6	11	5	13	11	13	11
Mycoplasma capricolum (Trp:W)	X16767	44	42	32	34	58%/42%	55%/45%	9	9	8	10	14	7	13	8	12	6	12	6	9	10	9	10
Mycoplasma mycoides (Ala:A)	X03154	44	54	32	22	58%/42%	71%/29%	5	7	6	6	18	8	21	5	15	9	17	7	6	8	10	4
Mycoplasma mycoides (Gly:G)	M21590	44	44	30	30	59%/41%	59%/41%	7	8	6	9	14	4	16	2	12	7	13	6	11	11	9	13
Mycoplasma mycoides (Ile:I)	X03154	44	52	33	25	57%/43%	68%/32%	9	10	10	9	13	6	16	3	14	6	12	8	8	11	14	5
Mycoplasma mycoides (Ile:I)	Y00372	44	42	33	35	57%/43%	55%/45%	10	10	8	12	13	7	13	7	11	6	11	6	10	10	10	10
Mycoplasma mycoides (Met:M)	X03154	44	42	33	35	57%/43%	55%/45%	6	9	5	10	17	5	16	6	15	7	15	7	6	12	6	12
Mycoplasma mycoides (Pro:P)	X03154	44	52	33	25	57%/43%	68%/32%	7	8	6	9	16	9	20	5	14	4	15	3	7	12	11	8
Mycoplasma mycoides (Arg:R)	X03154	44	42	33	35	57%/43%	55%/45%	7	10	5	12	16	8	16	8	15	5	14	6	6	10	7	9
Mycoplasma pneumoniae (Gly:G)	AE000043	44	44	30	30	59%/41%	59%/41%	9	7	8	8	13	5	14	4	10	7	11	6	12	11	11	12
Mycoplasma pneumoniae (Lys:K)	AE000043	44	46	31	29	59%/41%	61%/39%	10	8	8	10	13	6	15	4	12	7	13	6	9	10	10	9
Mycoplasma pneumoniae (Gln:Q)	AE000043	44	40	31	35	59%/41%	53%/47%	11	7	9	9	11	7	11	7	13	8	10	11	9	9	10	8
Mycoplasma sp. (Phe:F)	X01305	44	46	32	30	58%/42%	61%/39%	6	9	6	9	17	6	17	6	15	7	15	7	6	10	8	8
Mycoplasma sp. PG50 (Lys:K)	X05660	44	52	32	24	58%/42%	68%/32%	7	9	7	9	16	6	19	3	15	7	16	6	6	10	10	6
Pectobacterium carotovorum subsp. brasiliensis (Ile:I)	AF448597	44	54	33	23	57%/43%	70%/30%	6	10	8	8	17	8	19	6	14	5	14	5	7	10	13	4
Photobacterium phosphoreum (His:H)	X12976	44	42	32	34	58%/42%	55%/45%	6	7	6	7	15	7	15	7	14	6	13	7	9	12	8	13
Pseudomonas aeruginosa (Gly:G)	AE004843	44	42	30	32	59%/41%	57%/43%	6	8	6	8	15	5	15	5	16	6	15	7	7	11	6	12
Pseudomonas aeruginosa (Thr:T)	AF331071	44	44	32	32	58%/42%	58%/42%	8	8	7	9	16	7	15	8	13	6	13	6	7	11	9	9
Pseudomonas aeruginosa (Thr:T)	AE004843	44	46	32	30	58%/42%	61%/39%	8	9	8	9	15	7	15	7	15	4	15	4	6	12	8	10
Pylaiella littoralis (Ala:A)	X14875	44	46	29	27	60%/40%	63%/37%	8	6	8	6	15	7	15	7	11	4	13	2	10	12	10	12
Pylaiella littoralis (Ile:I)	X14875	44	40	30	34	59%/41%	54%/46%	6	10	4	12	17	7	16	8	15	3	15	3	6	10	5	11
Rhodospirillum rubrum (Phe:F)	K00331	44	38	32	38	58%/42%	50%/50%	4	10	2	12	19	6	17	8	17	7	16	8	4	9	3	10
Salmonella typhimurium (Pro:P)	AE008893	44	50	33	27	57%/43%	65%/35%	3	8	3	8	19	9	22	6	17	7	18	6	5	9	7	7
Salmonella typhimurium LT2 (Ala:A)	AE008786	44	40	32	36	58%/42%	53%/47%	6	7	3	10	17	8	17	8	15	8	16	7	6	9	4	11
Salmonella typhimurium LT2 (Cys:C)	AE008895	44	50	30	24	59%/41%	68%/32%	8	8	10	6	15	6	15	6	15	6	15	6	6	10	10	6
Salmonella typhimurium LT2 (Glu:E)	AE008839	44	38	32	38	58%/42%	50%/50%	5	9	4	10	17	5	15	7	16	11	14	13	6	7	5	8
Salmonella typhimurium LT2 (Gly:G)	AE008904	44	44	30	30	59%/41%	59%/41%	6	9	6	9	17	3	16	4	15	7	15	7	6	11	7	10
Salmonella typhimurium LT2 (Gly:G)	AE008904	44	48	32	28	58%/42%	63%/37%	4	8	3	9	19	7	21	5	17	7	19	5	4	10	5	9
Salmonella typhimurium LT2 (Gly:G)	AE008883	44	48	32	28	58%/42%	63%/37%	6	7	5	8	17	8	19	6	15	6	17	4	6	11	7	10
Salmonella typhimurium LT2 (Gly:G)	AE008809	44	32	30	42	59%/41%	43%/57%	5	8	2	11	15	4	14	5	16	8	14	10	8	10	2	16
Salmonella typhimurium LT2 (His:H)	AE008789	44	42	32	34	58%/42%	55%/45%	7	7	7	7	14	7	14	7	14	5	13	6	9	13	8	14
Salmonella typhimurium LT2 (Lys:K)	AE008799	44	52	32	24	58%/42%	68%/32%	8	9	8	9	14	6	18	2	13	5	13	5	9	12	13	8
Salmonella typhimurium LT2 (Asn:N)	AE008883	44	44	32	32	58%/42%	58%/42%	9	7	7	9	14	8	15	7	12	6	12	6	9	11	10	10
Salmonella typhimurium LT2 (Pro:P)	AE008727	44	48	33	29	57%/43%	62%/38%	3	9	3	9	19	9	21	7	17	6	18	5	5	9	6	8
Salmonella typhimurium LT2 (Pro:P)	AE008727	44	50	33	27	57%/43%	65%/35%	5	8	5	8	18	9	20	7	16	5	17	4	5	11	8	8
Salmonella typhimurium LT2 (Gln:Q)	AE008829	44	46	31	29	59%/41%	61%/39%	8	7	7	8	15	6	16	5	16	7	13	10	5	11	10	6
Salmonella typhimurium LT2 (Gln:Q)	AE008883	44	40	30	34	59%/41%	54%/46%	8	7	5	10	15	6	15	6	16	6	13	9	5	11	7	9
Salmonella typhimurium LT2 (Gln:Q)	AE008710	44	48	31	27	59%/41%	64%/36%	8	7	7	8	15	6	17	4	16	6	14	8	5	12	10	7
Salmonella typhimurium LT2 (Arg:R)	AE008893	44	46	33	31	57%/43%	60%/40%	6	11	7	10	16	7	16	7	16	7	15	8	6	8	8	6
Salmonella typhimurium LT2 (Arg:R)	AE008893	44	48	33	29	57%/43%	62%/38%	4	9	5	8	18	8	19	7	16	8	16	8	6	8	8	6
Salmonella typhimurium LT2 (Thr:T)	AE008893	44	44	32	32	58%/42%	58%/42%	10	8	8	10	14	7	14	7	12	6	13	5	8	11	9	10
Salmonella typhimurium LT2 (Thr:T)	AE008762	44	46	32	30	58%/42%	61%/39%	8	9	9	8	15	8	14	9	14	4	14	4	7	11	9	9
Salmonella typhimurium LT2 (Thr:T)	AE008809	44	44	31	31	59%/41%	59%/41%	11	9	7	13	12	7	15	4	11	7	12	6	10	8	10	8
Salmonella typhimurium LT2 (Thr:T)	AE008881	43	42	32	33	57%/43%	56%/44%	10	9	5	14	12	7	16	3	14	5	11	8	7	11	10	8
Salmonella typhimurium LT2 (Val:V)	AE008762	44	44	33	33	57%/43%	57%/43%	8	8	6	10	15	8	16	7	13	5	15	3	8	12	7	13
Salmonella typhimurium LT2 (Val:V)	AE008809	44	42	32	34	58%/42%	55%/45%	6	9	5	10	17	7	16	8	15	8	14	9	6	8	7	7
Salmonella typhimurium LT2 (Trp:W)	AE008881	44	42	32	34	58%/42%	55%/45%	5	9	4	10	18	6	17	7	15	6	15	6	6	11	6	11
Spiroplasma melliferum (Ala:A)	X03715	44	54	32	22	58%/42%	71%/29%	4	7	5	6	19	8	22	5	16	9	18	7	5	8	9	4
Spiroplasma melliferum (Cys:C)	X03715	44	40	32	36	58%/42%	53%/47%	8	9	6	11	15	6	14	7	15	8	14	9	6	9	6	9
Spiroplasma melliferum (Asp:D)	X03715	44	42	33	35	57%/43%	55%/45%	8	8	6	10	15	7	15	7	12	7	13	6	9	11	8	12
Spiroplasma melliferum (Phe:F)	X03715	44	42	32	34	58%/42%	55%/45%	10	9	8	11	13	6	13	6	11	5	10	6	10	12	11	11
Spiroplasma melliferum (Ile:I)	X03715	44	52	33	25	57%/43%	68%/32%	7	10	8	9	15	6	18	3	15	6	15	6	7	11	11	7
Spiroplasma melliferum (Met:M)	X03715	44	50	33	27	57%/43%	65%/35%	6	9	8	7	17	6	17	6	13	8	14	7	8	10	11	7
Spiroplasma melliferum (Pro:P)	X03715	44	46	33	31	57%/43%	60%/40%	7	8	7	8	16	9	16	9	13	5	13	5	8	11	10	9
Spiroplasma melliferum (Arg:R)	X03715	44	40	33	37	57%/43%	52%/48%	9	9	6	12	14	8	14	8	12	5	10	7	9	11	10	10
Staphylococcus epidermidis (Gly:G)	K00199	44	36	31	39	59%/41%	48%/52%	10	9	6	13	12	3	12	3	11	8	11	8	11	11	7	15
Staphylococcus epidermidis (Gly:G)	K00200	44	44	30	30	59%/41%	59%/41%	11	7	9	9	12	5	13	4	11	7	12	6	10	11	10	11
Staphylococcus epidermidis (Asn:N)	AF269878	44	44	28	28	61%/39%	61%/39%	7	7	8	6	14	8	14	8	15	3	14	4	8	10	8	10
Staphylococcus epidermidis (Asn:N)	AF269878	44	50	27	21	62%/38%	70%/30%	6	7	8	5	16	8	17	7	12	3	13	2	10	9	12	7
Streptococcus agalactiae (Ala:A)	AF291419	44	40	29	33	60%/40%	55%/45%	5	6	3	8	18	8	17	9	16	6	16	6	5	9	4	10
Streptomyces coelicolor (Lys:K)	AL596030	44	54	30	20	59%/41%	73%/27%	4	7	5	6	19	7	22	4	17	4	16	5	4	12	11	5
Streptomyces coelicolor A3(2) (Cys:C)	AL157953	44	40	30	34	59%/41%	54%/46%	6	10	4	12	17	6	16	7	17	7	16	8	4	7	4	7
Streptomyces coelicolor A3(2) (Gly:G)	AL157953	44	48	29	25	60%/40%	66%/34%	6	6	7	5	17	8	17	8	15	5	16	4	6	10	8	8
Streptomyces coelicolor A3(2) (Asn:N)	AL163003	44	42	29	31	60%/40%	58%/42%	6	7	4	9	17	8	17	8	16	3	16	3	5	11	5	11
Streptomyces coelicolor A3(2) (Asn:N)	AL163003	44	42	29	31	60%/40%	58%/42%	6	7	4	9	17	8	17	8	16	3	16	3	5	11	5	11
Streptomyces coelicolor A3(2) (Val:V)	AL157953	44	40	28	32	61%/39%	56%/44%	9	8	7	10	14	7	13	8	13	7	12	8	8	6	8	6
Synechocystis sp. (Glu:E)	M19535	44	46	31	29	59%/41%	61%/39%	6	9	7	8	16	5	16	5	15	10	15	10	7	7	8	6
Thermus thermophilus (Gly:G)	X51824	44	44	32	32	58%/42%	58%/42%	4	7	4	7	19	7	18	8	17	7	17	7	4	11	5	10
Thermus thermophilus (Ile:I)	M25628	44	50	33	27	57%/43%	65%/35%	6	10	7	9	17	7	18	6	16	6	16	6	5	10	9	6
Thermus thermophilus (Thr:T)	X51824	44	46	32	30	58%/42%	61%/39%	5	8	5	8	18	9	18	9	18	6	18	6	3	9	5	7
Thermus thermophilus (Thr:T)	X51824	44	42	32	34	58%/42%	55%/45%	4	9	3	10	19	5	18	6	17	8	17	8	4	10	4	10
Tolypothrix distorta (Ala:A)	AY007689	44	46	32	30	58%/42%	61%/39%	6	8	7	7	17	7	16	8	15	5	15	5	6	12	8	10
Vibrio cholerae (Asn:N)	AE004132	44	38	33	39	57%/43%	49%/51%	8	8	5	11	14	10	14	10	15	6	13	8	7	9	6	10
Vibrio cholerae (Pro:P)	AE004107	44	46	33	31	57%/43%	60%/40%	6	8	6	8	17	9	17	9	15	4	14	5	6	12	9	9
Eukaryotic Chloroplast		Paired		Unpaired		Ratio1		A2				G				C				U
		C	M	C	M	C	M	PC	UPC	PM	UPM	PC	UPC	PM	UPM	PC	UPC	PM	UPM	PC	UPC	PM	UPM
Chlamydomonas moewusii (Thr:T)	X51398	44	52	30	22	59%/41%	70%/30%	10	8	12	6	12	6	14	4	12	2	10	4	10	14	16	8
Chlamydomonas reinhardtii (Ala:A)	J01395	44	46	29	27	60%/40%	63%/37%	7	8	8	7	16	6	15	7	14	3	14	3	7	12	9	10
Chlamydomonas reinhardtii (Cys:C)	X54407	44	34	28	38	61%/39%	47%/53%	5	10	1	14	16	4	16	4	17	4	15	6	6	10	2	14
Chlamydomonas reinhardtii (Glu:E)	X54408	44	42	31	33	59%/41%	56%/44%	7	10	5	12	16	4	16	4	15	10	15	10	6	7	6	7
Chlamydomonas reinhardtii (Glu:E)	L26266	44	42	29	31	60%/40%	58%/42%	7	9	5	11	16	4	16	4	15	8	15	8	6	8	6	8
Chlamydomonas reinhardtii (Gly:G)	J01399	44	44	29	29	60%/40%	60%/40%	7	7	6	8	15	6	16	5	13	5	13	5	9	11	9	11
Chlamydomonas reinhardtii (Trp:W)	X62566	44	44	29	29	60%/40%	60%/40%	8	8	8	8	15	5	14	6	12	5	12	5	9	11	10	10
Chlorella ellipsoidea (Ala:A)	X05693	44	46	32	30	58%/42%	61%/39%	7	8	8	7	16	7	15	8	14	5	14	5	7	12	9	10
Chlorella ellipsoidea (Arg:R)	X15090	44	44	30	30	59%/41%	59%/41%	3	9	4	8	19	7	18	8	16	5	14	7	6	9	8	7
Chlorella pyrenoidosa (Ile:I)	X03848	44	40	30	34	59%/41%	54%/46%	8	9	6	11	15	7	14	8	14	3	14	3	7	11	6	12
Codium fragile (Gly:G)	M26736	44	46	31	29	59%/41%	61%/39%	9	7	9	7	13	6	14	5	12	5	12	5	10	13	11	12
Codium fragile (Met:M)	M26737	44	42	32	34	58%/42%	55%/45%	10	10	8	12	13	5	13	5	11	6	11	6	10	11	10	11
Codium fragile (Arg:R)	M26738	44	40	32	36	58%/42%	53%/47%	10	11	10	11	12	6	10	8	10	6	8	8	12	9	12	9
Cyanidium caldarium (Lys:K)	D17791	44	50	28	22	61%/39%	69%/31%	6	9	8	7	15	5	17	3	17	3	15	5	6	11	10	7
Euglena gracilis (Ala:A)	X70810	44	46	29	27	60%/40%	63%/37%	6	7	7	6	17	7	16	8	14	3	14	3	7	12	9	10
Euglena gracilis (Cys:C)	X70810	44	44	28	28	61%/39%	61%/39%	8	7	7	8	15	6	15	6	12	4	11	5	9	11	11	9
Euglena gracilis (Asp:D)	X70810	44	42	29	31	60%/40%	58%/42%	5	7	3	9	18	7	18	7	14	4	14	4	7	11	7	11
Euglena gracilis (Asp:D)	K00173	44	38	31	37	59%/41%	51%/49%	6	9	4	11	17	6	15	8	13	7	14	6	8	9	5	12
Euglena gracilis (Phe:F)	X70810	44	42	29	31	60%/40%	58%/42%	7	11	7	11	16	5	14	7	12	3	12	3	9	10	9	10
Euglena gracilis (Phe:F)	K00340	44	42	30	32	59%/41%	57%/43%	7	11	7	11	16	5	14	7	12	5	12	5	9	9	9	9
Euglena gracilis (Phe:F)	K00341	43	44	32	31	57%/43%	59%/41%	8	10	5	13	15	8	17	6	12	6	12	6	8	8	10	6
Euglena gracilis (Gly:G)	X70810	44	46	28	26	61%/39%	64%/36%	9	6	10	5	14	7	13	8	12	5	12	5	9	10	11	8
Euglena gracilis (Gly:G)	X70810	44	38	29	35	60%/40%	52%/48%	6	7	5	8	16	5	14	7	14	4	13	5	8	13	6	15
Euglena gracilis (His:H)	X70810	44	40	28	32	61%/39%	56%/44%	8	6	5	9	15	6	15	6	13	6	12	7	8	10	8	10
Euglena gracilis (Ile:I)	X70810	44	44	30	30	59%/41%	59%/41%	9	8	8	9	14	7	14	7	13	2	13	2	8	13	9	12
Euglena gracilis (Lys:K)	X70810	44	52	29	21	60%/40%	71%/29%	7	8	8	7	14	6	18	2	16	3	13	6	7	12	13	6
Euglena gracilis (Met:M)	X70810	44	38	29	35	60%/40%	52%/48%	7	12	5	14	16	5	14	7	13	3	12	4	8	9	7	10
Euglena gracilis (Asn:N)	X70810	44	40	28	32	61%/39%	56%/44%	11	7	9	9	11	8	11	8	12	3	11	4	10	10	9	11
Euglena gracilis (Pro:P)	X70810	44	46	30	28	59%/41%	62%/38%	7	7	7	7	16	9	16	9	14	2	14	2	7	12	9	10
Euglena gracilis (Gln:Q)	X70810	44	46	28	26	61%/39%	64%/36%	7	6	4	9	16	7	19	4	16	3	16	3	5	12	7	10
Euglena gracilis (Arg:R)	X70810	44	46	30	28	59%/41%	62%/38%	4	10	6	8	17	7	17	7	14	5	13	6	9	8	10	7
Euglena gracilis (Thr:T)	X70810	44	44	28	28	61%/39%	61%/39%	8	7	9	6	14	7	13	8	11	2	10	3	11	12	12	11
Euglena gracilis (Val:V)	X70810	44	42	29	31	60%/40%	58%/42%	6	9	5	10	17	5	16	6	13	4	13	4	8	11	8	11
Euglena gracilis (Trp:W)	X70810	44	46	29	27	60%/40%	63%/37%	9	10	9	10	14	5	14	5	11	4	12	3	10	10	11	9
Glycine max (Met:M)	X07377	44	46	29	27	60%/40%	63%/37%	10	10	11	9	13	4	12	5	9	4	10	3	12	11	13	10
Glycine max (Val:V)	X07675	44	46	28	26	61%/39%	64%/36%	11	7	9	9	12	8	14	6	10	4	10	4	11	9	13	7
Guillardia theta (Arg:R)	AF041468	44	40	29	33	60%/40%	55%/45%	7	11	5	13	15	3	15	3	12	5	12	5	10	10	8	12
Lactuca sativa (His:H)	AF426317	44	46	30	28	59%/41%	62%/38%	6	9	8	7	17	6	15	8	15	4	11	8	6	11	12	5
Marchantia polymorpha (Ala:A)	M20942	44	42	29	31	60%/40%	58%/42%	6	7	5	8	17	7	16	8	15	4	15	4	6	11	6	11
Marchantia polymorpha (Asp:D)	X04465	44	44	30	30	59%/41%	59%/41%	7	8	6	9	16	7	16	7	14	4	12	6	7	11	10	8
Marchantia polymorpha (Glu:E)	X04465	44	44	29	29	60%/40%	60%/40%	5	9	5	9	17	4	17	4	15	8	15	8	7	8	7	8
Marchantia polymorpha (Glu:E)	X04465	44	48	29	25	60%/40%	66%/34%	5	8	6	7	17	5	18	4	15	7	14	8	7	9	10	6
Marchantia polymorpha (Phe:F)	X04465	44	42	29	31	60%/40%	58%/42%	7	11	6	12	16	5	15	6	13	3	13	3	8	10	8	10
Marchantia polymorpha (Gly:G)	X01647	44	36	27	35	62%/38%	51%/49%	8	8	5	11	14	4	13	5	14	4	13	5	8	11	5	14
Marchantia polymorpha (Gly:G)	M20952	44	40	27	31	62%/38%	56%/44%	8	7	5	10	13	5	15	3	15	4	13	6	8	11	7	12
Marchantia polymorpha (His:H)	X04465	44	40	30	34	59%/41%	54%/46%	5	8	4	9	17	7	16	8	15	4	13	6	7	11	7	11
Marchantia polymorpha (Ile:I)	X04465	44	42	30	32	59%/41%	57%/43%	11	10	10	11	13	3	11	5	12	5	11	6	8	12	10	10
Marchantia polymorpha (Ile:I)	M20955	44	42	28	30	61%/39%	58%/42%	6	9	5	10	17	7	16	8	15	3	15	3	6	9	6	9
Marchantia polymorpha (Ile:I)	M20955	44	42	30	32	59%/41%	57%/43%	5	11	5	11	17	7	16	8	16	4	15	5	6	8	6	8
Marchantia polymorpha (Lys:k)	M20959	44	52	28	20	61%/39%	72%/28%	6	9	8	7	16	5	18	3	17	3	15	5	5	11	11	5
Marchantia polymorpha (Met:M)	X04465	44	46	30	28	59%/41%	62%/38%	11	10	11	10	12	4	12	4	10	4	10	4	11	12	13	10
Marchantia polymorpha (Asn:N)	X04465	44	42	28	30	61%/39%	58%/42%	7	8	7	8	15	7	14	8	12	3	11	4	10	10	10	10
Marchantia polymorpha (Pro:P)	X04465	44	34	25	35	64%/36%	49%/51%	10	7	6	11	13	7	11	9	9	2	8	3	12	9	9	12
Marchantia polymorpha (Pro:P)	X04465	44	44	30	30	59%/41%	59%/41%	9	6	8	7	14	8	14	8	12	2	12	2	9	14	10	13
Marchantia polymorpha (Gln:Q)	X04465	44	40	28	32	61%/39%	56%/44%	5	5	3	7	17	7	17	7	14	3	14	3	8	13	6	15
Marchantia polymorpha (Arg:R)	X04465	44	40	30	34	59%/41%	54%/46%	3	11	4	10	18	6	16	8	15	4	11	8	8	9	9	8
Marchantia polymorpha (Arg:R)	X04465	44	52	30	22	59%/41%	70%/30%	8	9	11	6	13	6	15	4	12	4	12	4	11	11	14	8
Marchantia polymorpha (Arg:R)	X04465	44	46	28	26	61%/39%	64%/36%	9	11	10	10	13	4	13	4	12	3	11	4	10	10	12	8
Marchantia polymorpha (Thr:T)	X04465	44	42	28	30	61%/39%	58%/42%	10	9	8	11	13	7	13	7	12	2	12	2	9	10	9	10
Marchantia polymorpha (Thr:T)	X04465	44	40	29	33	60%/40%	55%/45%	6	7	5	8	16	7	15	8	13	5	12	6	9	10	8	11
Marchantia polymorpha (Val:V)	X04465	44	42	28	30	61%/39%	58%/42%	12	8	10	10	11	7	11	7	10	5	10	5	11	8	11	8
Marchantia polymorpha (Val:V)	M20972	44	40	28	32	61%/39%	56%/44%	9	9	7	11	14	4	13	5	14	5	13	6	7	10	7	10
Marchantia polymorpha (Trp:W)	X04465	44	42	30	32	59%/41%	57%/43%	10	9	9	10	13	5	12	6	10	6	10	6	11	10	11	10
Medicago sativa (His:H)	AY029748	44	46	31	29	59%/41%	61%/39%	7	9	9	7	16	6	14	8	15	5	11	9	6	11	12	5
Medicago truncatula (Asp:D)	AC093544	44	42	30	32	59%/41%	57%/43%	5	8	3	10	18	7	18	7	15	5	15	5	6	10	6	10
Medicago truncatula (Met:M)	AC093544	44	46	29	27	60%/40%	63%/37%	11	10	11	10	12	4	12	4	9	4	10	3	12	11	13	10
Medicago truncatula (Pro:P)	AC093544	44	52	30	22	59%/41%	70%/30%	10	7	11	6	13	7	15	5	12	3	13	2	9	13	13	9
Medicago truncatula (Arg:R)	AC093544	44	46	28	26	61%/39%	64%/36%	9	10	9	10	13	4	14	3	11	3	11	3	11	11	12	10
Medicago truncatula (Thr:T)	AC093544	44	42	28	30	61%/39%	58%/42%	9	10	7	12	14	6	14	6	14	2	14	2	7	10	7	10
Medicago truncatula (Trp:W)	AC093544	44	40	30	34	59%/41%	54%/46%	8	9	6	11	15	5	14	6	13	6	13	6	8	10	7	11
Mesostigma viride (Lys:K)	AF166114	44	50	28	22	61%/39%	69%/31%	6	10	8	8	15	4	17	2	17	3	15	5	6	11	10	7
Nephroselmis olivacea (Ala:A)	AF137379	42	40	29	31	59%/41%	56%/44%	5	8	4	9	17	6	16	7	14	6	15	5	6	9	5	10
Nicotiana tabacum (Cys:C)	Z00044	44	40	28	32	61%/39%	56%/44%	7	8	7	8	16	5	13	8	15	4	11	8	6	11	9	8
Nicotiana tabacum (Asp:D)	Z00044	44	48	30	26	59%/41%	65%/35%	5	8	6	7	18	7	18	7	15	6	14	7	6	9	10	5
Nicotiana tabacum (Glu:E)	Z00044	44	42	29	31	60%/40%	58%/42%	5	8	4	9	17	5	17	5	14	5	13	6	8	11	8	11
Nicotiana tabacum (Phe:F)	Z00044	44	42	29	31	60%/40%	58%/42%	7	11	6	12	16	5	15	6	14	3	14	3	7	10	7	10
Nicotiana tabacum (Gly:G)	Z00044	44	56	27	15	62%/38%	79%/21%	9	7	12	4	14	6	16	4	12	4	11	5	9	10	17	2
Nicotiana tabacum (His:H)	Z00044	44	46	31	29	59%/41%	61%/39%	6	9	8	7	17	6	15	8	15	5	11	9	6	11	12	5
Nicotiana tabacum (Met:M)	Z00044	44	46	29	27	60%/40%	63%/37%	10	10	11	9	13	4	12	5	10	4	10	4	11	11	13	9
Nicotiana tabacum (Asn:N)	Z00044	44	40	28	32	61%/39%	56%/44%	6	7	6	7	16	8	14	10	12	3	11	4	10	10	9	11
Nicotiana tabacum (Pro:P)	Z00044	44	50	30	24	59%/41%	68%/32%	10	6	10	6	13	8	15	6	12	3	13	2	9	13	12	10
Nicotiana tabacum (Gln:Q)	Z00044	44	42	28	30	61%/39%	58%/42%	6	5	3	8	17	8	18	7	16	2	14	4	5	13	7	11
Nicotiana tabacum (Thr:T)	Z00044	44	42	28	30	61%/39%	58%/42%	9	10	7	12	14	6	14	6	13	2	13	2	8	10	8	10
Nicotiana tabacum (Trp:W)	Z00044	44	38	30	36	59%/41%	51%/49%	8	9	6	11	15	5	13	7	12	6	12	6	9	10	7	12
Nicotiana tabacum (Tyr:Y)	X00360	44	44	32	32	58%/42%	58%/42%	7	9	6	10	16	8	16	8	13	5	14	4	8	10	8	10
Nicotiana tabacum (Tyr:Y)	X00361	44	46	32	30	58%/42%	61%/39%	6	9	6	9	17	8	17	8	14	5	15	4	7	10	8	9
Parodia erinacea (Thr:T)	AY064336	44	42	29	31	60%/40%	58%/42%	7	7	8	6	14	7	13	8	16	2	13	5	7	13	8	12
Pelargonium zonale (Arg:R)	X01120	44	36	30	38	59%/41%	49%/51%	5	11	2	14	17	6	16	7	17	4	14	7	5	9	4	10
Phaseolus vulgaris (Phe:F)	K00336	44	42	32	34	58%/42%	55%/45%	7	12	6	13	16	5	15	6	13	5	13	5	8	10	8	10
Pisum sativum (Phe:F)	X04551	44	40	31	35	59%/41%	53%/47%	8	9	6	11	16	8	14	10	14	6	12	8	6	8	8	6
Pisum sativum (Gly:G)	X05394	44	42	27	29	62%/38%	59%/41%	8	9	8	9	14	4	13	5	11	5	11	5	11	9	10	10
Pisum sativum (Pro:P)	X05395	44	52	30	22	59%/41%	70%/30%	10	7	11	6	13	6	15	4	12	3	13	2	9	14	13	10
Pisum sativum (Arg:R)	M16863	44	38	30	36	59%/41%	51%/49%	3	11	3	11	18	6	16	8	19	4	13	10	4	9	6	7
Pisum sativum (Val:V)	X55033	44	42	28	30	61%/39%	58%/42%	10	8	9	9	13	7	12	8	10	5	10	5	11	8	11	8
Pisum sativum (Trp:W)	X05395	44	44	30	30	59%/41%	59%/41%	4	9	3	10	18	6	19	5	16	9	16	9	6	6	6	6
Pisum sativum (Trp:W)	X05395	44	40	30	34	59%/41%	54%/46%	8	8	6	10	15	5	14	6	13	6	13	6	8	11	7	12
Ptychosperma burretianum (Glu:E)	AF449169	44	42	29	31	60%/40%	58%/42%	5	7	4	8	17	5	17	5	13	7	12	8	9	10	9	10
Scenedesmus obliquus (Phe:F)	M25610	44	38	31	37	59%/41%	51%/49%	8	9	5	12	14	9	14	9	13	7	13	7	9	6	6	9
Scenedesmus obliquus (Met:M)	M25611	43	38	33	38	57%/43%	50%/50%	9	10	5	14	14	5	14	5	13	8	13	8	7	10	6	11
Scenedesmus obliquus (Tyr:Y)	X02224	44	46	31	29	59%/41%	61%/39%	6	9	5	10	17	8	18	7	13	6	12	7	8	8	11	5
Sinapis alba (His:H)	X17331	44	44	29	29	60%/40%	60%/40%	6	9	5	10	17	5	17	5	14	3	13	4	7	12	9	10
Sinapis alba (Gln:Q)	X13558	44	42	28	30	61%/39%	58%/42%	6	6	3	9	17	7	18	6	16	3	14	5	5	12	7	10
Spinacia oleracea (Cys:C)	AJ400848	44	48	27	23	62%/38%	68%/32%	5	8	6	7	19	5	18	6	15	4	14	5	5	10	10	5
Spinacia oleracea (Asp:D)	AJ400848	44	44	30	30	59%/41%	59%/41%	5	8	4	9	18	7	18	7	15	5	14	6	6	10	8	8
Spinacia oleracea (Glu:E)	AJ400848	44	40	29	33	60%/40%	55%/45%	6	8	4	10	16	4	16	4	14	8	13	9	8	9	7	10
Spinacia oleracea (Phe:F)	X02686	44	42	32	34	58%/42%	55%/45%	7	12	6	13	16	5	15	6	13	6	13	6	8	9	8	9
Spinacia oleracea (His:H)	AJ400848	44	44	31	31	59%/41%	59%/41%	6	9	5	10	17	5	17	5	15	4	14	5	6	13	8	11
Spinacia oleracea (Ile:I)	K01839	44	40	30	34	59%/41%	54%/46%	10	10	5	15	14	3	15	2	12	5	12	5	8	12	8	12
Spinacia oleracea (Ile:I)	K00222	44	42	28	30	61%/39%	58%/42%	5	9	4	10	18	7	17	8	15	3	15	3	6	9	6	9
Spinacia oleracea (Ile:I)	K00222	44	42	31	33	59%/41%	56%/44%	5	10	4	11	18	7	17	8	15	5	15	5	6	9	6	9
Spinacia oleracea (Ile:I)	K00222	44	42	28	30	61%/39%	58%/42%	5	8	4	9	18	7	17	8	15	4	15	4	6	9	6	9
Spinacia oleracea (Ile:I)	K02848	44	40	32	36	58%/42%	53%/47%	10	11	5	16	14	3	15	2	12	6	12	6	8	12	8	12
Spinacia oleracea (Met:M)	AJ400848	44	46	29	27	60%/40%	63%/37%	10	10	11	9	13	4	12	5	9	5	11	3	12	10	12	10
Spinacia oleracea (Pro:P)	K00358	43	44	31	30	58%/42%	59%/41%	9	8	9	8	12	6	13	5	12	5	12	5	10	12	10	12
Spinacia oleracea (Pro:P)	AJ400848	44	52	30	22	59%/41%	70%/30%	9	7	10	6	14	7	16	5	12	3	13	2	9	13	13	9
Spinacia oleracea (Arg:R)	AJ400848	44	46	28	26	61%/39%	64%/36%	9	12	11	10	12	4	12	4	11	3	11	3	12	9	12	9
Spinacia oleracea (Thr:T)	AJ400848	44	42	28	30	61%/39%	58%/42%	9	10	7	12	14	6	14	6	13	2	13	2	8	10	8	10
Spinacia oleracea (Thr:T)	K00281	44	42	31	33	59%/41%	56%/44%	9	11	7	13	14	6	14	6	14	4	14	4	7	10	7	10
Spinacia oleracea (Thr:T)	AJ400848	44	42	29	31	60%/40%	58%/42%	7	7	8	6	14	8	13	9	16	2	13	5	7	12	8	11
Spinacia oleracea (Val:V)	AJ400848	44	50	28	22	61%/39%	69%/31%	10	7	11	6	13	8	14	7	10	5	10	5	11	8	15	4
Spinacia oleracea (Val:V)	K00247	44	40	31	35	59%/41%	53%/47%	10	10	5	15	13	6	15	4	14	6	14	6	7	9	6	10
Spinacia oleracea (Val:V)	K00247	44	50	30	24	59%/41%	68%/32%	11	8	8	11	13	6	17	2	13	5	12	6	7	11	13	5
Spinacia oleracea (Trp:W)	K00262	44	38	31	37	59%/41%	51%/49%	8	8	6	10	15	6	13	8	12	8	12	8	9	9	7	11
Spirodela punctata (Arg:R)	X00764	44	46	28	26	61%/39%	64%/36%	9	9	10	8	13	5	13	5	11	3	12	2	11	11	11	11
Triticum aestivum (Met:M)	X02560	44	36	27	35	62%/38%	51%/49%	9	8	5	12	14	5	13	6	15	4	13	6	6	10	5	11
Triticum aestivum (Trp:W)	K02003	44	44	33	33	57%/43%	57%/43%	5	8	6	7	17	8	16	9	14	8	16	6	8	9	6	11
Triticum aestivum (Gly:G)	X00756	43	52	32	23	57%/43%	69%/31%	6	8	7	7	17	7	19	5	14	6	13	7	6	11	13	4
Vicia faba (Glu:E)	X00682	44	40	29	33	60%/40%	55%/45%	5	8	3	10	17	4	17	4	14	7	13	8	8	10	7	11
Vicia faba (Phe:F)	X51471	44	42	29	31	60%/40%	58%/42%	8	10	7	11	15	6	14	7	13	5	13	5	8	8	8	8
Zea mays (Cys:C)	X86563	44	46	27	25	62%/38%	65%/35%	6	9	5	10	17	5	18	4	15	5	17	3	6	8	6	8
Zea mays (Trp:W)	X86563	44	40	30	34	59%/41%	54%/46%	8	9	6	11	15	5	14	6	13	5	13	5	8	11	7	12
Eukaryotic Nuclear		Paired		Unpaired		Ratio1		A2				G				C				U
		C	M	C	M	C	M	PC	UPC	PM	UPM	PC	UPC	PM	UPM	PC	UPC	PM	UPM	PC	UPC	PM	UPM
Arabidopsis thaliana (Asp:D)	AC016041	44	36	28	36	61%/39%	50%/50%	4	7	2	9	17	7	16	8	14	6	13	7	9	8	5	12
Arabidopsis thaliana (Phe:F)	AC011665	44	40	29	33	60%/40%	55%/45%	8	8	6	10	16	9	14	11	14	4	12	6	6	8	8	6
Arabidopsis thaliana (Lys:K)	AC026234	44	40	32	36	58%/42%	53%/47%	4	7	4	7	17	8	16	9	15	7	14	8	8	10	6	12
Arabidopsis thaliana (Pro:P)	NM_105549	44	36	31	39	59%/41%	48%/52%	7	5	5	7	14	10	13	11	13	5	12	6	10	11	6	15
Arabidopsis thaliana (Pro:P)	NM_105549	44	36	28	36	61%/39%	50%/50%	7	5	5	7	14	9	13	10	13	3	12	4	10	11	6	15
Arabidopsis thaliana (Pro:P)	AC018907	44	36	28	36	61%/39%	50%/50%	7	3	5	5	14	10	13	11	13	3	12	4	10	12	6	16
Arabidopsis thaliana (Arg:R)	AB019236	44	44	32	32	58%/42%	58%/42%	7	10	6	11	16	7	16	7	16	6	16	6	5	9	6	8
Arabidopsis thaliana (Val:V)	AC025417	44	44	30	30	59%/41%	59%/41%	7	8	6	9	15	7	16	6	12	6	12	6	10	9	10	9
Bombyx mori (Ala:A)	M23363	44	48	29	25	60%/40%	66%/34%	3	11	6	8	20	7	18	9	17	2	16	3	4	9	8	5
Bombyx mori (Glu:E)	X03602	44	54	28	18	61%/39%	75%/25%	7	5	8	4	16	7	19	4	13	5	14	4	8	11	13	6
Bombyx mori (Gly:G)	K00206	44	46	30	28	59%/41%	62%/38%	4	6	4	6	18	8	19	7	16	8	16	8	6	8	7	7
Bos taurus (Asp:D)	K00175	41	44	31	28	57%/43%	61%/39%	7	9	6	10	15	8	16	7	12	7	14	5	7	7	8	6
Bos taurus (Phe:F)	K00352	44	46	32	30	58%/42%	61%/39%	9	10	7	12	14	8	16	6	12	6	12	6	9	8	11	6
Bos taurus (Arg:R)	V00134	44	50	32	26	58%/42%	66%/34%	6	8	5	9	17	9	20	6	14	6	16	4	7	9	9	7
Bos taurus (Arg:R)	X04541	44	46	32	30	58%/42%	61%/39%	6	8	5	9	17	8	18	7	15	5	13	7	6	11	10	7
Bos taurus (Thr:T)	M26109	44	42	32	34	58%/42%	55%/45%	7	8	3	12	17	7	18	6	15	7	14	8	5	10	7	8
Bos taurus (Trp:W)	M10543	44	42	31	33	59%/41%	56%/44%	6	9	5	10	17	7	16	8	14	6	14	6	7	9	7	9
Bos taurus (Tyr:Y)	M26210	44	42	32	34	58%/42%	55%/45%	7	8	6	9	16	8	15	9	13	5	13	5	8	11	8	11
Caenorhabditis elegans (Asp:D)	U41014	44	52	28	20	61%/39%	72%/28%	5	7	6	6	17	7	20	4	14	5	14	5	8	9	12	5
Caenorhabditis elegans (Lys:K)	AF040661	44	40	29	33	60%/40%	55%/45%	5	6	3	8	17	6	17	6	15	6	15	6	7	11	5	13
Caenorhabditis elegans (Pro:P)	AC024859	44	38	28	34	61%/39%	53%/47%	5	4	4	5	16	9	15	10	15	4	14	5	8	11	5	14
Caenorhabditis elegans (Trp:W)	U70846	44	40	28	32	61%/39%	56%/44%	6	7	5	8	17	7	15	9	13	5	13	5	8	9	7	10
Dictyostelium discoideum (Glu:E)	AF037042	44	42	28	30	61%/39%	58%/42%	8	5	7	6	13	6	14	5	11	7	11	7	12	10	10	12
Dictyostelium discoideum (Val:V)	AF067200	44	52	30	22	59%/41%	70%/30%	8	7	9	6	14	7	17	4	10	5	11	4	12	11	15	8
Dictyostelium discoideum (Val:V)	X03499	44	48	30	26	59%/41%	65%/35%	7	6	8	5	16	7	16	7	11	6	10	7	10	11	14	7
Drosophila melanogaster (Ala:A)	AC009461	44	48	29	25	60%/40%	66%/34%	5	10	8	7	18	8	16	10	15	2	14	3	6	9	10	5
Drosophila melanogaster (Asp:D)	NG_000295	44	38	28	34	61%/39%	53%/47%	5	7	3	9	17	6	16	7	15	5	13	7	7	10	6	11
Drosophila melanogaster (Glu:E)	V00238	44	44	28	28	61%/39%	61%/39%	8	6	7	7	15	5	15	5	12	6	12	6	9	11	10	10
Drosophila melanogaster (Glu:E)	AC010564	44	44	28	28	61%/39%	61%/39%	8	6	7	7	15	5	15	5	13	6	13	6	8	11	9	10
Drosophila melanogaster (Glu:E)	K00193	44	46	31	29	59%/41%	61%/39%	9	6	7	8	14	7	16	5	12	8	13	7	9	10	10	9
Drosophila melanogaster (Glu:E)	NG_000161	44	46	28	26	61%/39%	64%/36%	9	5	7	7	14	7	16	5	12	6	13	5	9	10	10	9
Drosophila melanogaster (Phe:F)	AC023722	44	46	29	27	60%/40%	63%/37%	9	9	7	11	14	8	16	6	13	4	13	4	8	8	10	6
Drosophila melanogaster (Phe:F)	K00349	44	46	32	30	58%/42%	61%/39%	9	10	7	12	14	8	16	6	13	6	13	6	8	8	10	6
Drosophila melanogaster (Gly:G)	NG_000194	44	46	27	25	62%/38%	65%/35%	4	5	4	5	18	8	19	7	16	6	16	6	6	8	7	7
Drosophila melanogaster (Gly:G)	X07778	44	46	27	25	62%/38%	65%/35%	5	5	5	5	17	8	18	7	16	6	15	7	6	8	8	6
Drosophila melanogaster (His:H)	AC099014	44	50	28	22	61%/39%	69%/31%	5	7	7	5	16	7	18	5	16	4	15	5	7	10	10	7
Drosophila melanogaster (His:H)	K00215	44	50	31	25	59%/41%	67%/33%	5	8	7	6	16	7	18	5	16	6	15	7	7	10	10	7
Drosophila melanogaster (Ile:I)	NG_000454	44	42	30	32	59%/41%	57%/43%	5	9	4	10	17	6	17	6	16	4	15	5	6	11	6	11
Drosophila melanogaster (Lys:K)	AC008257	44	42	29	31	60%/40%	58%/42%	6	6	3	9	17	8	18	7	14	6	14	6	7	9	7	9
Drosophila melanogaster (Lys:K)	AC008257	44	42	31	33	59%/41%	56%/44%	6	7	4	9	17	8	17	8	14	8	15	7	7	8	6	9
Drosophila melanogaster (Lys:K)	K01859	44	46	31	29	59%/41%	61%/39%	7	8	7	8	16	7	16	7	14	6	13	7	7	10	10	7
Drosophila melanogaster (Met:M)	K00462	44	44	28	28	61%/39%	61%/39%	6	11	5	12	16	7	17	6	14	5	13	6	8	5	9	4
Drosophila melanogaster (Asn:N)	AC008257	44	46	30	28	59%/41%	62%/38%	4	6	3	7	19	9	20	8	17	2	15	4	4	13	8	9
Drosophila melanogaster (Pro:P)	AC018491	44	42	28	30	61%/39%	58%/42%	5	5	4	6	16	10	17	9	15	4	15	4	8	9	6	11
Drosophila melanogaster (Pro:P)	AE003723	44	42	28	30	61%/39%	58%/42%	6	5	5	6	15	10	16	9	14	3	14	3	9	10	7	12
Drosophila melanogaster (Arg:R)	AC008257	44	46	29	27	60%/40%	63%/37%	8	8	6	10	15	8	17	6	14	4	12	6	7	9	11	5
Drosophila melanogaster (Arg:R)	AC021639	44	42	29	31	60%/40%	58%/42%	7	8	6	9	16	8	15	9	14	3	14	3	7	10	7	10
Drosophila melanogaster (Thr:T)	AC097445	44	40	30	34	59%/41%	54%/46%	6	8	3	11	18	7	17	8	14	3	12	5	6	12	8	10
Drosophila melanogaster (Val:V)	AC009461	44	42	29	31	60%/40%	58%/42%	7	8	3	12	15	6	18	3	15	7	15	7	7	8	6	9
Drosophila melanogaster (Val:V)	AC010713	44	44	32	32	58%/42%	58%/42%	8	8	7	9	14	7	15	6	14	10	13	11	8	7	9	6
Drosophila melanogaster (Val:V)	AC009461	44	42	29	31	60%/40%	58%/42%	8	8	7	9	14	6	14	6	13	6	13	6	9	9	8	10
Drosophila melanogaster (Val:V)	M25880	44	40	32	36	58%/42%	53%/47%	6	9	5	10	16	6	15	7	14	9	14	9	8	8	6	10
Drosophila melanogaster (Val:V)	AC091207	44	40	30	34	59%/41%	54%/46%	8	8	6	10	14	6	14	6	13	8	13	8	9	8	7	10
Drosophila melanogaster (Tyr:Y)	M26124	44	42	32	34	58%/42%	55%/45%	7	10	6	11	16	7	15	8	13	5	13	5	8	10	8	10
Gallus gallus (Lys:K)	J00881	44	42	29	31	60%/40%	58%/42%	6	6	3	9	17	8	18	7	14	5	14	5	7	10	7	10
Homo sapiens (Ala:A)	AC013472	44	40	32	36	58%/42%	53%/47%	5	12	3	14	18	7	17	8	16	4	16	4	5	9	4	10
Homo sapiens (Ala:A)	AL121936	44	40	32	36	58%/42%	53%/47%	6	12	4	14	17	7	16	8	15	4	15	4	6	9	5	10
Homo sapiens (Ala:A)	AL121932	44	44	28	28	61%/39%	61%/39%	6	6	4	8	17	7	18	6	14	6	15	5	7	9	7	9
Homo sapiens (Glu:E)	J00309	44	42	28	30	61%/39%	58%/42%	4	4	1	7	17	6	20	3	17	7	18	6	6	11	3	14
Homo sapiens (Glu:E)	AL355149	44	44	28	28	61%/39%	61%/39%	4	4	3	5	17	7	19	5	16	6	14	8	7	11	8	10
Homo sapiens (Phe:F)	AL662890	44	46	29	27	60%/40%	63%/37%	9	8	7	10	14	9	16	7	12	4	12	4	9	8	11	6
Homo sapiens (Gly:G)	K00208	44	44	30	30	59%/41%	59%/41%	6	9	6	9	17	3	16	4	15	7	15	7	6	11	7	10
Homo sapiens (Gly:G)	K00209	44	38	30	36	59%/41%	51%/49%	4	7	3	8	17	6	16	7	16	7	15	8	7	10	4	13
Homo sapiens (Gly:G)	AL355149	44	44	27	27	62%/38%	62%/38%	6	7	6	7	16	5	16	5	14	7	14	7	8	8	8	8
Homo sapiens (Gly:G)	K00208	44	38	30	36	59%/41%	51%/49%	6	6	4	8	16	8	15	9	14	8	13	9	8	8	6	10
Homo sapiens (His:H)	X01553	44	42	32	34	58%/42%	55%/45%	7	7	7	7	14	7	14	7	14	5	13	6	9	13	8	14
Homo sapiens (His:H)	U43279	44	40	28	32	61%/39%	56%/44%	10	7	6	11	13	7	14	6	11	3	11	3	10	11	9	12
Homo sapiens (His:H)	U43279	43	38	31	36	58%/42%	51%/49%	9	8	5	12	13	7	14	6	11	5	11	5	10	11	8	13
Homo sapiens (His:H)	X01553	44	42	31	33	59%/41%	56%/44%	6	8	5	9	15	7	16	6	15	6	13	8	8	10	8	10
Homo sapiens (Ile:I)	AL121934	44	48	33	29	57%/43%	62%/38%	4	10	5	9	20	6	19	7	15	6	14	7	5	11	10	6
Homo sapiens (Lys:K)	U00939	44	46	32	30	58%/42%	61%/39%	7	8	5	10	16	7	18	5	14	6	14	6	7	11	9	9
Homo sapiens (Asn:N)	AL356957	44	48	30	26	59%/41%	65%/35%	6	6	5	7	17	10	19	8	14	3	14	3	7	11	10	8
Homo sapiens (Asn:N)	K01921	44	50	30	24	59%/41%	68%/32%	6	7	8	5	17	8	17	8	15	4	15	4	6	11	10	7
Homo sapiens (Asn:N)	X15813	44	42	30	32	59%/41%	57%/43%	6	10	5	11	15	5	16	4	15	4	14	5	8	11	7	12
Homo sapiens (Pro:P)	AC024952	44	42	28	30	61%/39%	58%/42%	5	6	4	7	16	10	17	9	15	3	15	3	8	9	6	11
Homo sapiens (Pro:P)	AC008443	44	42	28	30	61%/39%	58%/42%	5	5	4	6	16	10	17	9	15	3	15	3	8	10	6	12
Homo sapiens (Gln:Q)	K01921	44	50	30	24	59%/41%	68%/32%	6	7	8	5	17	8	17	8	15	4	15	4	6	11	10	7
Homo sapiens (Gln:Q)	X15814	44	40	30	34	59%/41%	54%/46%	6	10	4	12	15	5	16	4	16	4	14	6	7	11	6	12
Homo sapiens (Gln:Q)	X15813	44	42	30	32	59%/41%	57%/43%	6	10	5	11	15	5	16	4	15	4	14	5	8	11	7	12
Homo sapiens (Arg:R)	AJ333675	44	44	32	32	58%/42%	58%/42%	7	9	4	12	16	8	18	6	14	6	13	7	7	9	9	7
Homo sapiens (Arg:R)	AL121936	44	46	32	30	58%/42%	61%/39%	7	9	5	11	16	8	18	6	15	6	13	8	6	9	10	5
Homo sapiens (Arg:R)	AC083880	44	48	32	28	58%/42%	63%/37%	5	9	4	10	18	6	20	4	14	7	17	4	7	10	7	10
Homo sapiens (Thr:T)	AL163636	44	40	29	33	60%/40%	55%/45%	6	8	4	10	17	7	16	8	15	3	15	3	6	11	5	12
Homo sapiens (Val:V)	AC008443	44	44	32	32	58%/42%	58%/42%	7	11	8	10	15	6	14	7	14	7	14	7	8	8	8	8
Homo sapiens (Val:V)	AC008443	44	44	29	29	60%/40%	60%/40%	7	10	8	9	15	6	14	7	14	6	14	6	8	7	8	7
Homo sapiens (Val:V)	AL031229	44	44	29	29	60%/40%	60%/40%	8	12	9	11	14	5	13	6	13	5	11	7	9	7	11	5
Homo sapiens (Val:V)	AC008443	44	42	29	31	60%/40%	58%/42%	7	9	6	10	15	6	15	6	14	6	13	7	8	8	8	8
Homo sapiens (Val:V)	AC008443	44	42	29	31	60%/40%	58%/42%	7	9	6	10	15	6	15	6	14	6	13	7	8	8	8	8
Homo sapiens (Val:V)	AC005783	44	38	29	35	60%/40%	52%/48%	8	7	4	11	14	6	15	5	14	8	14	8	8	8	5	11
Homo sapiens (Tyr:Y)	X04779	44	42	32	34	58%/42%	55%/45%	7	8	6	9	16	8	15	9	13	6	13	6	8	10	8	10
Hordeum vulgare (Glu:E)	X06283	44	44	31	31	59%/41%	59%/41%	5	8	5	8	17	5	17	5	14	11	14	11	8	7	8	7
Hordeum vulgare (Glu:E)	X06283	44	50	32	26	58%/42%	66%/34%	6	8	6	8	17	7	19	5	15	8	15	8	6	9	10	5
Hordeum vulgare (Glu:E)	X06378	44	42	32	34	58%/42%	55%/45%	5	8	4	9	17	5	17	5	13	9	12	10	9	10	9	10
Hordeum vulgare (Glu:E)	X06284	44	46	32	30	58%/42%	61%/39%	6	9	7	8	17	6	16	7	15	7	12	10	6	10	11	5
Hordeum vulgare (Gln:Q)	X06376	44	42	29	31	60%/40%	58%/42%	5	6	3	8	18	7	18	7	15	4	14	5	6	12	7	11
Lupinus luteus (Glu:E)	M23387	44	46	32	30	58%/42%	61%/39%	7	9	6	10	16	5	17	4	13	9	14	8	8	9	9	8
Lupinus luteus (Phe:F)	K00345	44	42	32	34	58%/42%	55%/45%	9	10	6	13	15	8	15	8	13	6	12	7	7	8	9	6
Lupinus luteus (Gly:G)	X05493	44	46	30	28	59%/41%	62%/38%	8	7	6	9	15	7	17	5	14	8	15	7	7	8	8	7
Lupinus luteus (His:H)	M16065	44	52	31	23	59%/41%	69%/31%	9	9	9	9	14	7	17	4	13	5	12	6	8	10	14	4
Lupinus luteus (Ile:I)	X06459	44	46	33	31	57%/43%	60%/40%	6	11	7	10	17	5	16	6	15	6	14	7	6	11	9	8
Lupinus luteus (Asn:N)	X07526	44	52	32	24	58%/42%	68%/32%	6	7	7	6	17	9	19	7	13	6	13	6	8	10	13	5
Lupinus luteus (Val:V)	X05082	44	48	32	28	58%/42%	63%/37%	7	8	9	6	15	8	15	8	12	7	12	7	10	9	12	7
Lupinus luteus (Val:V)	X05082	44	48	30	26	59%/41%	65%/35%	11	7	10	8	13	7	14	6	13	5	13	5	7	11	11	7
Mus musculus (Glu:E)	X00229	44	42	28	30	61%/39%	58%/42%	3	5	3	5	18	7	18	7	15	6	13	8	8	10	8	10
Mus musculus (Glu:E)	X00229	44	42	31	33	59%/41%	56%/44%	3	6	3	6	18	7	18	7	16	8	14	10	7	10	7	10
Mus musculus (Gly:G)	AC069308	44	46	27	25	62%/38%	65%/35%	6	5	6	5	16	8	17	7	14	6	13	7	8	8	10	6
Mus musculus (His:H)	J00642	44	44	28	28	61%/39%	61%/39%	6	7	5	8	15	8	17	6	15	4	13	6	8	9	9	8
Mus musculus (Ile:I)	AL589879	44	48	30	26	59%/41%	65%/35%	4	9	5	8	20	6	19	7	15	4	14	5	5	11	10	6
Mus musculus (Met:M)	X04525	44	42	31	33	59%/41%	56%/44%	6	11	5	12	16	6	16	6	14	7	13	8	8	7	8	7
Mus musculus (Asn:N)	AY050218	44	48	30	26	59%/41%	65%/35%	6	6	5	7	17	9	19	7	15	4	14	5	6	11	10	7
Mus musculus (Pro:P)	K00360	44	44	30	30	59%/41%	59%/41%	5	6	3	8	16	10	19	7	15	5	15	5	8	9	7	10
Mus musculus (Gln:Q)	AC092498	44	46	28	26	61%/39%	64%/36%	7	9	9	7	14	5	14	5	14	3	11	6	9	11	12	8
Mus musculus (Gln:Q)	M16252	44	42	31	33	59%/41%	56%/44%	6	10	5	11	15	5	16	4	15	4	14	5	8	12	7	13
Neurospora crassa (Phe:F)	X02710	44	36	30	38	59%/41%	49%/51%	10	8	6	12	14	8	12	10	12	6	12	6	8	8	6	10
Oryctolagus cuniculus (Asp:D)	K00176	44	38	32	38	58%/42%	50%/50%	6	8	3	11	17	9	16	10	14	7	15	6	7	8	4	11
Oryctolagus cuniculus (Lys:K)	K00289	44	44	32	32	58%/42%	58%/42%	5	7	4	8	18	8	18	8	15	8	16	7	6	9	6	9
Oryctolagus cuniculus (Met:M)	X68632	44	38	32	38	58%/42%	50%/50%	6	10	4	12	16	6	15	7	14	7	13	8	8	9	6	11
Oryza sativa (Cys:C)	AC092750	44	34	27	37	62%/38%	48%/52%	6	9	2	13	17	5	15	7	15	5	15	5	6	8	2	12
Oryza sativa (Phe:F)	AC092750	44	42	29	31	60%/40%	58%/42%	8	11	7	12	15	5	14	6	13	3	13	3	8	10	8	10
Oryza sativa (Gly:G)	AC092750	44	36	27	35	62%/38%	51%/49%	9	8	5	12	14	5	13	6	16	4	13	7	5	10	5	10
Oryza sativa (Ile:I)	AC099402	44	36	30	38	59%/41%	49%/51%	9	10	5	14	15	3	13	5	13	3	12	4	7	14	6	15
Oryza sativa (Met:M)	AC092750	44	46	29	27	60%/40%	63%/37%	9	9	9	9	14	4	14	4	9	4	10	3	12	12	13	11
Oryza sativa (Met:M)	AC092750	44	46	29	27	60%/40%	63%/37%	9	10	10	9	14	4	13	5	9	4	10	3	12	11	13	10
Oryza sativa (Asn:N)	AC099402	44	48	28	24	61%/39%	67%/33%	6	7	7	6	16	8	17	7	11	3	11	3	11	10	13	8
Oryza sativa (Arg:R)	AC099402	44	40	30	34	59%/41%	54%/46%	3	11	2	12	18	6	18	6	18	4	14	8	5	9	6	8
Oryza sativa (Thr:T)	AC092750	44	42	28	30	61%/39%	58%/42%	11	10	9	12	12	6	12	6	12	2	12	2	9	10	9	10
Oryza sativa (Thr:T)	AC092750	44	46	29	27	60%/40%	63%/37%	8	9	10	7	15	6	13	8	14	2	11	5	7	12	12	7
Oryza sativa (Val:V)	AC099402	44	50	28	22	61%/39%	69%/31%	11	7	12	6	12	8	13	7	10	5	10	5	11	8	15	4
Pichia jadinii (Ile:I)	K01061	44	50	33	27	57%/43%	65%/35%	7	10	6	11	16	6	19	3	15	6	14	7	6	11	11	6
Pichia jadinii (Pro:P)	K00357	44	40	31	35	59%/41%	53%/47%	4	5	3	6	16	9	17	8	15	5	14	6	9	12	6	15
Pichia jadinii (Tyr:Y)	M24830	44	52	34	26	56%/44%	67%/33%	8	10	7	11	16	6	19	3	15	6	14	7	5	12	12	5
Rattus norvegicus (Asp:D)	K00444	44	38	28	34	61%/39%	53%/47%	5	6	3	8	17	8	16	9	15	5	13	7	7	9	6	10
Rattus norvegicus (Asp:D)	K03129	44	38	28	34	61%/39%	53%/47%	5	6	3	8	17	7	16	8	15	6	13	8	7	9	6	10
Rattus norvegicus (Asp:D)	V01269	44	42	31	33	59%/41%	56%/44%	5	7	4	8	17	8	17	8	15	7	13	9	7	9	8	8
Rattus norvegicus (Glu:E)	V01272	45	42	28	30	62%/38%	58%/42%	4	5	3	5	18	7	18	7	15	6	13	8	8	10	8	10
Rattus norvegicus (Glu:E)	K00446	44	42	28	30	61%/39%	58%/42%	3	5	3	5	18	7	18	7	16	6	14	8	7	10	7	10
Rattus norvegicus (Glu:E)	K00446	44	46	28	26	61%/39%	64%/36%	3	5	4	4	19	7	19	7	15	6	12	9	7	10	11	6
Rattus norvegicus (Glu:E)	K00195	45	46	31	29	59%/41%	61%/39%	6	6	6	5	16	7	17	6	15	8	13	10	8	10	10	8
Rattus norvegicus (Phe:F)	M22764	45	46	30	28	60%/40%	62%/38%	10	9	7	11	14	9	16	7	12	4	12	4	9	8	11	6
Rattus norvegicus (Gly:G)	V01272	44	38	28	34	61%/39%	53%/47%	6	7	4	9	16	7	15	8	14	5	13	6	8	9	6	11
Rattus norvegicus (Gly:G)	X00706	44	38	28	34	61%/39%	53%/47%	7	7	4	10	15	7	15	7	14	5	13	6	8	9	6	11
Rattus norvegicus (Lys:K)	X04545	44	42	32	34	58%/42%	55%/45%	6	7	3	10	17	8	18	7	14	8	14	8	7	9	7	9
Rattus norvegicus (Asn:N)	K00166	44	48	32	28	58%/42%	63%/37%	6	7	5	8	17	9	19	7	15	6	14	7	6	10	10	6
Rattus norvegicus (Pro:P)	K01637	44	42	28	30	61%/39%	58%/42%	5	6	4	7	16	10	17	9	14	3	14	3	9	9	7	11
Rattus norvegicus (Gln:Q)	V01265	44	46	31	29	59%/41%	61%/39%	7	10	9	8	14	5	14	5	14	5	11	8	9	11	12	8
Rattus norvegicus (Val:V)	M34549	44	42	31	33	59%/41%	56%/44%	7	10	7	10	15	6	14	7	14	7	13	8	8	8	8	8
Saccharomyces cerevisiae (Cys:C)	M34549	44	46	28	26	61%/39%	64%/36%	7	6	7	6	15	8	16	7	12	4	12	4	10	10	11	9
Saccharomyces cerevisiae (Cys:C)	X01939	44	46	31	29	59%/41%	61%/39%	7	7	7	7	15	8	16	7	12	6	12	6	10	10	11	9
Saccharomyces cerevisiae (Asp:D)	X90518	44	46	28	26	61%/39%	64%/36%	5	7	4	8	18	6	19	5	13	4	14	3	8	11	9	10
Saccharomyces cerevisiae (Asp:D)	M25168	44	46	31	29	59%/41%	61%/39%	5	8	4	9	18	6	19	5	13	6	14	5	8	11	9	10
Saccharomyces cerevisiae (Glu:E)	U51030	43	40	28	32	61%/39%	56%/44%	5	7	5	8	15	5	15	5	14	8	12	10	9	8	8	9
Saccharomyces cerevisiae (Glu:E)	U18778	43	40	28	32	61%/39%	56%/44%	7	7	6	9	14	5	14	5	13	8	13	8	9	8	7	10
Saccharomyces cerevisiae (Glu:E)	K00191	43	40	31	35	58%/42%	53%/47%	7	8	6	10	14	5	14	5	13	10	13	10	9	8	7	10
Saccharomyces cerevisiae (Phe:F)	M10263	44	42	29	31	60%/40%	58%/42%	9	8	7	10	14	9	14	9	12	4	11	5	9	8	10	7
Saccharomyces cerevisiae (Phe:F)	M14867	44	44	32	32	58%/42%	58%/42%	8	10	7	11	15	8	15	8	13	6	12	7	8	8	10	6
Saccharomyces cerevisiae (Gly:G)	K00204	44	38	29	35	60%/40%	52%/48%	7	6	4	9	15	7	15	7	14	6	14	6	8	10	5	13
Saccharomyces cerevisiae (Gly:G)	U18779	44	50	27	21	62%/38%	70%/30%	7	5	6	6	15	7	19	3	14	5	14	5	8	10	11	7
Saccharomyces cerevisiae (Gly:G)	Z71561	44	38	30	36	59%/41%	51%/49%	4	9	3	10	17	5	16	6	14	7	13	8	9	9	6	12
Saccharomyces cerevisiae (Gly:G)	Z71561	44	32	31	43	59%/41%	43%/57%	5	8	2	11	15	4	14	5	16	8	14	10	8	11	2	17
Saccharomyces cerevisiae (His:H)	M26097	43	46	31	28	58%/42%	62%/38%	9	8	8	9	13	7	15	5	10	5	11	4	11	11	12	10
Saccharomyces cerevisiae (Ile:I)	U18922	44	46	30	28	59%/41%	62%/38%	6	9	8	7	17	6	15	8	16	4	13	7	5	11	10	6
Saccharomyces cerevisiae (Ile:I)	X69098	44	40	29	33	60%/40%	55%/45%	4	9	5	8	16	4	15	5	16	5	14	7	8	11	6	13
Saccharomyces cerevisiae (Lys:K)	K00286	44	42	32	34	58%/42%	55%/45%	8	7	5	10	15	7	16	6	13	7	12	8	8	11	9	10
Saccharomyces cerevisiae (Lys:K)	U18530	44	44	29	29	60%/40%	60%/40%	8	6	6	8	15	7	16	6	13	5	11	7	8	11	11	8
Saccharomyces cerevisiae (Lys:K)	K00287	44	38	29	35	60%/40%	52%/48%	8	6	6	8	15	7	13	9	12	4	12	4	9	12	7	14
Saccharomyces cerevisiae (Met:M)	J01372	44	46	32	30	58%/42%	61%/39%	10	11	11	10	13	4	12	5	9	7	11	5	12	10	12	10
Saccharomyces cerevisiae (Met:M)	M10268	44	40	32	36	58%/42%	53%/47%	8	12	6	14	14	6	14	6	12	7	13	6	10	7	7	10
Saccharomyces cerevisiae (Asn:N)	M26099	44	46	33	31	57%/43%	60%/40%	9	8	7	10	15	7	16	6	13	7	13	7	7	11	10	8
Saccharomyces cerevisiae (Pro:P)	M26096	44	48	31	27	59%/41%	64%/36%	4	5	4	5	16	9	20	5	15	6	16	5	9	11	8	12
Saccharomyces cerevisiae (Gln:Q)	X66375	44	44	27	27	62%/38%	62%/38%	6	8	8	6	14	5	14	5	15	3	11	7	9	11	11	9
Saccharomyces cerevisiae (Gln:Q)	U18796	44	48	28	24	61%/39%	67%/33%	5	8	8	5	15	5	16	4	15	2	14	3	9	13	10	12
Saccharomyces cerevisiae (Arg:R)	U18917	44	52	32	24	58%/42%	68%/32%	6	10	7	9	16	7	19	4	16	6	16	6	6	9	10	5
Saccharomyces cerevisiae (Arg:R)	L47993	44	48	28	24	61%/39%	67%/33%	7	7	7	7	16	7	17	6	14	5	16	3	7	9	8	8
Saccharomyces cerevisiae (Arg:R)	U18530	44	46	28	26	61%/39%	64%/36%	8	7	8	7	15	6	15	6	12	6	11	7	9	9	12	6
Saccharomyces cerevisiae (Arg:R)	K00158	44	46	31	29	59%/41%	61%/39%	8	8	8	8	15	6	15	6	12	8	11	9	9	9	12	6
Saccharomyces cerevisiae (Arg:R)	K00159	44	42	31	33	59%/41%	56%/44%	8	8	8	8	15	5	13	7	11	9	10	10	10	9	11	8
Saccharomyces cerevisiae (Thr:T)	K00279	44	38	32	38	58%/42%	50%/50%	9	11	5	15	15	6	14	7	13	5	13	5	7	10	6	11
Saccharomyces cerevisiae (Val:V)	Z75085	44	48	30	26	59%/41%	65%/35%	8	6	8	6	14	7	16	5	12	7	12	7	10	10	12	8
Saccharomyces cerevisiae (Val:V)	K00249	44	40	32	36	58%/42%	53%/47%	9	8	6	11	13	6	14	5	12	10	12	10	10	8	8	10
Saccharomyces cerevisiae (Val:V)	Z47814	44	46	33	31	57%/43%	60%/40%	8	9	6	11	15	6	17	4	14	8	15	7	7	10	8	9
Saccharomyces cerevisiae (Trp:W)	M35060	44	44	31	31	59%/41%	59%/41%	7	10	7	10	15	5	15	5	12	6	12	6	10	10	10	10
Saccharomyces cerevisiae (Tyr:Y)	M10266	44	40	34	38	56%/44%	51%/49%	7	10	4	13	17	6	16	7	15	6	15	6	5	12	5	12
Saccharomyces pastorianus (Phe:F)	X00655	44	42	32	34	58%/42%	55%/45%	9	10	7	12	14	8	14	8	12	6	11	7	9	8	10	7
Schizosaccharomyces pombe (Asp:D)	AL590457	44	42	27	29	62%/38%	59%/41%	8	7	5	10	14	8	16	6	13	5	13	5	9	7	8	8
Schizosaccharomyces pombe (Glu:E)	AL121794	44	48	28	24	61%/39%	67%/33%	5	5	6	4	16	7	18	5	16	7	16	7	7	9	8	8
Schizosaccharomyces pombe (Phe:F)	Z97208	44	44	29	29	60%/40%	60%/40%	8	7	7	8	14	10	15	9	9	4	10	3	13	8	12	9
Schizosaccharomyces pombe (Phe:F)	K00344	42	40	30	32	58%/42%	56%/44%	8	9	6	11	12	8	14	6	9	6	9	6	13	7	11	9
Schizosaccharomyces pombe (His:H)	AL031825	44	52	28	20	61%/39%	72%/28%	7	5	7	5	14	9	19	4	15	3	14	4	8	11	12	7
Schizosaccharomyces pombe (Lys:K)	Z97185	44	46	31	29	59%/41%	61%/39%	8	6	8	6	15	8	15	8	13	4	11	6	8	13	12	9
Schizosaccharomyces pombe (Arg:R)	X00239	44	46	29	27	60%/40%	63%/37%	7	8	7	8	16	7	16	7	13	4	10	7	8	10	13	5
Schizosaccharomyces pombe (Arg:R)	AL590457	44	48	29	25	60%/40%	66%/34%	7	7	7	7	16	8	17	7	14	4	13	5	7	10	11	6
Schizosaccharomyces pombe (Arg:R)	AL590457	44	46	31	29	59%/41%	61%/39%	4	9	4	9	19	6	19	6	15	8	15	8	6	8	8	6
Schizosaccharomyces pombe (Tyr:Y)	K00273	44	50	33	27	57%/43%	65%/35%	6	8	7	7	14	8	18	4	14	5	13	6	10	12	12	10
Sorghum bicolor (Gly:G)	AF466201	44	46	27	25	62%/38%	65%/35%	8	6	6	8	15	7	17	5	14	6	15	5	7	8	8	7
Synechococcus sp. PCC 7002 (Phe:F)	K02680	43	38	32	37	57%/43%	51%/49%	6	11	4	13	17	5	15	7	17	5	14	8	3	11	5	9
Tetrahymena pyriformis (Asn:N)	X16643	44	48	30	26	59%/41%	65%/35%	9	6	8	7	14	8	16	6	14	5	14	5	7	11	10	8
Tetrahymena thermophila (Gln:Q)	M35401	44	44	30	30	59%/41%	59%/41%	7	10	8	9	14	4	14	4	11	7	11	7	12	9	11	10
Tetrahymena thermophila (Gln:Q)	M11464	44	42	31	33	59%/41%	56%/44%	6	10	4	12	15	5	17	3	12	5	12	5	11	11	9	13
Tetrahymena thermophila (Gln:Q)	M35400	44	50	31	25	59%/41%	67%/33%	7	8	9	6	14	7	16	5	13	6	11	8	10	10	14	6
Trypanosoma brucei (Lys:K)	AF047724	44	52	28	20	61%/39%	72%/28%	2	6	4	4	21	7	22	6	14	6	16	4	7	9	10	6
Trypanosoma brucei (Val:V)	X16590	44	44	29	29	60%/40%	60%/40%	6	6	4	8	17	7	18	6	13	6	14	5	8	10	8	10
Trypanosoma brucei rhodesiense (Gln:Q)	X16590	44	42	28	30	61%/39%	58%/42%	8	10	8	10	13	5	13	5	13	3	13	3	10	10	8	12
Xenopus laevis (Ala:A)	Y00430	44	44	28	28	61%/39%	61%/39%	6	7	5	8	17	6	17	6	12	4	12	4	9	11	10	10
Xenopus laevis (Asp:D)	X04460	44	46	31	29	59%/41%	61%/39%	5	7	4	8	17	8	19	6	15	7	15	7	7	9	8	8
Xenopus laevis (Phe:F)	K02849	44	46	32	30	58%/42%	61%/39%	9	9	7	11	14	9	16	7	12	6	12	6	9	8	11	6
Xenopus laevis (Lys:K)	Y00163	44	42	29	31	60%/40%	58%/42%	7	7	4	10	15	7	17	5	15	4	14	5	7	11	7	11
Xenopus laevis (Val:V)	X04819	44	42	29	31	60%/40%	58%/42%	8	9	7	10	14	6	14	6	13	6	13	6	9	8	8	9

^† We count the number of A,G,C and U nucleotides paired or unpaired, regardless of the type of base-pair they appear in (i.e., canonical or non-canonical).
¹ Paired and Unpaired percentages are calculated by dividing the number of paired or unpaired nucleotides in a given category by the total number of nucelotides for all sequences in that category.
² C, Comparative; M, Mfold 3.1; P^C, Comparative, Paired Nucleotides; UP^C, Comparative, Unpaired Nucleotides; P^M, Nucleotides Predicted to be Paired by MFold; UP^M, Nucleotides Predicted to be Unpaired by MFold.