Archaea   2-10 11-20 21-30 31-40 41-50 51-60 61-70 71-80 81-90 91-100
C1 P A C P A C P A C P A C P A C P A C P A C P A C P A C P A
Aeropyrum pernix AP000062 70 54 77% 99 68 69% 57 33 58% 42 32 76% 24 15 63% 15 11 73% 13 11 85% 7 7 100% 6 4 67% 5 0 0%
Archaeoglobus fulgidus X05567 AE000965 73 46 63% 99 66 67% 50 30 60% 40 16 40% 27 14 52% 16 13 81% 12 7 58% 5 1 20% 12 0 0% 7 0 0%
Haloarcula marismortui rrnA X61688 70 51 73% 95 67 71% 51 29 57% 40 35 88% 27 25 93% 14 9 64% 12 7 58% 5 3 60% 11 6 55% 6 3 50%
Haloarcula marismortui rrnB X61689 70 53 76% 96 75 78% 51 37 73% 40 36 90% 27 25 93% 15 10 67% 12 11 92% 5 3 60% 11 6 55% 6 3 50%
Halobacterium sp. AE005128 72 59 82% 96 69 72% 50 26 52% 40 36 90% 25 21 84% 16 16 100% 12 8 67% 5 3 60% 11 9 82% 6 6 100%
Haloferax volcanii K00421 71 64 90% 96 77 80% 51 35 69% 40 38 95% 27 26 96% 15 15 100% 12 12 100% 6 4 67% 9 8 89% 6 6 100%
Methanobacterium formicicum M36508 72 59 82% 92 82 89% 52 34 65% 39 27 69% 26 17 65% 16 3 19% 11 8 73% 6 6 100% 11 5 45% 7 3 43%
Methanococcus jannaschii U67517 L77117 73 56 77% 96 73 76% 54 32 59% 39 32 82% 24 16 67% 16 6 38% 12 4 33% 8 5 63% 10 5 50% 7 3 43%
Methanococcus vannielii M36507 73 54 74% 94 64 68% 48 29 60% 40 26 65% 24 10 42% 16 13 81% 12 12 100% 6 6 100% 11 6 55% 6 2 33%
Methanospirillum hungatei M60880 71 48 68% 93 60 65% 48 22 46% 38 18 47% 26 18 69% 15 15 100% 12 12 100% 5 2 40% 11 0 0% 6 0 0%
Methanothermobacter thermautotrophicus AE000930 73 60 82% 95 76 80% 51 30 59% 38 24 63% 27 18 67% 15 15 100% 12 12 100% 5 5 100% 11 7 64% 8 7 88%
Natronobacterium innermongoliae AF009601 72 67 93% 95 81 85% 53 33 62% 40 30 75% 25 18 72% 17 17 100% 11 11 100% 5 3 60% 11 9 82% 6 6 100%
Natronorubrum bangense Y14028 72 67 93% 94 80 85% 53 32 60% 40 30 75% 26 19 73% 15 15 100% 12 12 100% 5 3 60% 10 9 90% 7 6 86%
Pyrococcus abyssi AJ248283 73 59 81% 101 76 75% 51 33 65% 40 26 65% 26 20 77% 17 17 100% 11 11 100% 8 8 100% 7 5 71% 10 5 50%
Pyrococcus furiosus U20163 73 59 81% 98 71 72% 52 35 67% 39 23 59% 26 14 54% 17 17 100% 11 11 100% 9 9 100% 7 5 71% 9 5 56%
Pyrococcus horikoshii AP000001 73 59 81% 100 76 76% 51 33 65% 40 26 65% 26 20 77% 17 17 100% 11 11 100% 8 8 100% 7 5 71% 10 5 50%
Pyrodictium occultum M21087 70 50 71% 98 67 68% 55 32 58% 40 22 55% 24 14 58% 16 11 69% 12 11 92% 8 8 100% 6 4 67% 5 0 0%
Sulfolobus acidocaldarius D14876 70 49 70% 99 83 84% 55 33 60% 39 31 79% 24 10 42% 15 8 53% 12 11 92% 8 4 50% 5 3 60% 5 0 0%
Sulfolobus P2 NPA2 70 47 67% 97 69 71% 56 27 48% 40 24 60% 24 13 54% 16 16 100% 12 7 58% 9 6 67% 5 0 0% 5 0 0%
Sulfolobus solfataricus X03235 70 49 70% 99 83 84% 55 33 60% 39 31 79% 24 10 42% 15 8 53% 12 11 92% 8 4 50% 5 3 60% 5 0 0%
Thermococcus celer M21529 75 57 76% 94 74 79% 52 35 67% 37 25 68% 26 20 77% 18 18 100% 11 11 100% 9 9 100% 9 7 78% 8 4 50%
Thermoplasma acidophilum AL445067 M38637 71 61 86% 94 77 82% 52 36 69% 40 24 60% 24 15 63% 15 15 100% 12 7 58% 7 1 14% 11 4 36% 7 3 43%
Thermoproteus tenax M35966 72 56 78% 100 76 76% 58 39 67% 37 21 57% 24 17 71% 18 18 100% 11 11 100% 10 10 100% 5 5 100% 5 0 0%
Bacteria   2-10 11-20 21-30 31-40 41-50 51-60 61-70 71-80 81-90 91-100
C1 P A C P A C P A C P A C P A C P A C P A C P A C P A C P A
Acidobacterium capsulatum D26171 65 53 82% 71 48 68% 55 26 47% 36 16 44% 26 14 54% 18 13 72% 13 3 23% 13 5 38% 7 0 0% 8 5 63%
Acinetobacter calcoaceticus M34139 72 50 69% 80 47 59% 57 24 42% 36 22 61% 29 13 45% 19 13 68% 12 7 58% 8 2 25% 10 4 40% 8 3 38%
Actinomyces israelii X82450 67 30 45% 87 31 36% 57 23 40% 43 22 51% 27 6 22% 16 8 50% 12 1 8% 4 0 0% 5 0 0% 7 0 0%
Aeromonas hydrophila X60407 69 55 80% 87 57 66% 57 23 40% 37 24 65% 33 17 52% 19 15 79% 11 5 45% 11 5 45% 11 9 82% 8 5 63%
Agrobacterium tumefaciens M11223 73 49 67% 79 58 73% 59 36 61% 32 25 78% 26 11 42% 17 13 76% 15 13 87% 12 9 75% 8 8 100% 11 8 73%
Allochromatium vinosum M26629 71 44 62% 76 41 54% 56 25 45% 36 19 53% 29 18 62% 19 7 37% 11 1 9% 10 2 20% 8 0 0% 8 0 0%
Anabaena sp. X59559 71 49 69% 82 43 52% 62 30 48% 32 20 63% 22 7 32% 17 12 71% 16 11 69% 12 6 50% 9 6 67% 10 8 80%
Aquifex aeolicus AE000709 AE000751 78 64 82% 97 78 80% 63 45 71% 36 26 72% 31 24 77% 19 19 100% 14 12 86% 8 5 63% 7 4 57% 5 2 40%
Aquifex pyrophilus M83548 80 62 78% 92 74 80% 60 46 77% 36 26 72% 31 24 77% 20 19 95% 14 12 86% 8 5 63% 7 4 57% 5 2 40%
Arthrobacter globiformis M23411 73 55 75% 86 53 62% 64 38 59% 38 17 45% 24 9 38% 16 7 44% 11 7 64% 9 6 67% 11 8 73% 8 0 0%
Azorhizobium caulinodans D11342 70 50 71% 74 46 62% 60 32 53% 33 17 52% 26 12 46% 16 9 56% 16 8 50% 11 5 45% 9 8 89% 11 8 73%
Bacillus anthracis X55059 70 55 79% 79 63 80% 51 26 51% 30 6 20% 25 8 32% 15 8 53% 8 0 0% 4 0 0% 6 2 33% 8 5 63%
Bacillus cereus X55060 69 54 78% 82 61 74% 51 27 53% 35 15 43% 24 11 46% 16 8 50% 8 0 0% 4 0 0% 7 2 29% 8 5 63%
Bacillus halodurans AB013373 74 58 78% 89 65 73% 59 27 46% 36 16 44% 30 22 73% 18 18 100% 12 5 42% 8 4 50% 9 4 44% 10 5 50%
Bacillus subtilis K00637 75 61 81% 90 66 73% 59 24 41% 37 17 46% 27 12 44% 19 14 74% 12 5 42% 8 4 50% 9 4 44% 10 5 50%
Bacteroides fragilis M61006 71 57 80% 86 54 63% 55 32 58% 43 31 72% 31 15 48% 14 10 71% 12 10 83% 8 4 50% 11 9 82% 7 5 71%
Bartonella bacilliformis Z11683 66 38 58% 72 50 69% 58 31 53% 33 24 73% 25 12 48% 17 13 76% 15 10 67% 12 9 75% 8 7 88% 8 8 100%
Bartonella henselae M73229 67 46 69% 72 51 71% 58 31 53% 33 25 76% 26 9 35% 17 13 76% 15 10 67% 12 9 75% 8 7 88% 8 8 100%
Bartonella quintana M11927 74 48 65% 80 56 70% 59 35 59% 32 20 63% 24 11 46% 17 13 76% 15 7 47% 12 5 42% 8 6 75% 11 3 27%
Beggiatoa sp. 1401-13 L40997 67 42 63% 80 56 70% 57 30 53% 34 26 76% 29 14 48% 18 4 22% 11 3 27% 13 3 23% 9 1 11% 9 0 0%
Bordetella bronchiseptica U04948 75 61 81% 89 64 72% 59 31 53% 34 14 41% 31 11 35% 17 13 76% 14 10 71% 7 5 71% 11 10 91% 9 6 67%
Bordetella parapertussis U04949 72 57 79% 84 50 60% 57 43 75% 34 21 62% 31 21 68% 12 10 83% 11 7 64% 3 2 67% 10 9 90% 6 6 100%
Bordetella pertussis U04950 72 52 72% 83 50 60% 57 36 63% 34 18 53% 31 19 61% 13 9 69% 11 2 18% 3 0 0% 10 0 0% 6 0 0%
Borrelia burgdorferi M88329 76 51 67% 94 56 60% 55 27 49% 33 19 58% 35 17 49% 15 10 67% 11 10 91% 9 6 67% 9 6 67% 10 3 30%
Borrelia hermsii U42292 75 56 75% 93 52 56% 55 22 40% 33 17 52% 34 16 47% 16 11 69% 10 8 80% 9 6 67% 9 6 67% 10 3 30%
Brachyspira hyodysenteriae U23035 70 49 70% 81 47 58% 58 22 38% 36 9 25% 26 10 38% 16 8 50% 10 5 50% 9 1 11% 10 5 50% 8 2 25%
Bradyrhizobium japonicum Z35330 74 59 80% 78 49 63% 61 30 49% 31 24 77% 26 12 46% 16 14 88% 15 13 87% 12 9 75% 9 7 78% 10 3 30%
Brevinema andersonii L31543 69 47 68% 82 47 57% 50 23 46% 36 25 69% 27 14 52% 12 10 83% 9 7 78% 10 7 70% 7 4 57% 6 6 100%
Brucella melitensis L26166 68 53 78% 69 41 59% 57 34 60% 32 29 91% 25 18 72% 17 14 82% 15 10 67% 12 9 75% 8 6 75% 8 3 38%
Buchnera sp. APS AP000398 65 47 72% 83 49 59% 55 25 45% 36 13 36% 32 17 53% 19 9 47% 12 2 17% 5 0 0% 10 4 40% 6 0 0%
Burkholderia mallei S55008 58 45 78% 76 47 62% 52 27 52% 24 10 42% 27 13 48% 17 13 76% 10 5 50% 7 3 43% 11 5 45% 9 3 33%
Burkholderia sp. U37342 72 53 74% 83 51 61% 56 33 59% 34 23 68% 30 23 77% 18 18 100% 14 5 36% 7 4 57% 11 10 91% 9 4 44%
Campylobacter jejuni Z29326 74 57 77% 87 52 60% 60 29 48% 35 19 54% 29 10 34% 15 10 67% 13 9 69% 9 6 67% 10 8 80% 7 2 29%
Campylobacter sputorum X67775 68 44 65% 77 42 55% 58 27 47% 36 17 47% 28 9 32% 15 12 80% 13 10 77% 7 5 71% 5 0 0% 5 3 60%
Chlamydia muridarum AE002280 73 54 74% 90 52 58% 62 34 55% 36 26 72% 30 23 77% 20 16 80% 12 5 42% 9 3 33% 7 2 29% 8 3 38%
Chlamydia trachomatis U68443 73 54 74% 90 52 58% 62 34 55% 36 26 72% 30 23 77% 20 16 80% 12 5 42% 9 4 44% 7 2 29% 8 3 38%
Chlamydophila pneumoniae L06108 73 60 82% 94 64 68% 60 34 57% 38 29 76% 29 17 59% 19 10 53% 12 2 17% 9 3 33% 8 3 38% 9 4 44%
Chlamydophila psittaci U68447 73 55 75% 93 59 63% 61 38 62% 37 27 73% 30 18 60% 18 10 56% 12 3 25% 9 3 33% 7 2 29% 9 4 44%
Chlorobium vibrioforme M62791 74 51 69% 79 45 57% 58 25 43% 43 26 60% 27 9 33% 13 8 62% 10 2 20% 7 0 0% 12 5 42% 5 2 40%
Chlorogloeopsis sp. PCC 7518 X68780 71 53 75% 81 53 65% 60 33 55% 35 29 83% 22 11 50% 16 8 50% 16 12 75% 12 9 75% 10 8 80% 10 5 50%
Chromohalobacter marismortui X87222 69 44 64% 81 53 65% 54 25 46% 37 19 51% 32 16 50% 19 13 68% 12 2 17% 9 1 11% 10 5 50% 8 3 38%
Citrobacter freundii M59291 67 38 57% 79 43 54% 55 22 40% 34 14 41% 32 14 44% 19 13 68% 11 2 18% 8 1 13% 9 7 78% 5 5 100%
Clostridium botulinum F L37593 65 59 91% 75 65 87% 62 42 68% 37 19 51% 22 12 55% 18 18 100% 13 5 38% 7 3 43% 10 6 60% 8 3 38%
Clostridium difficile X73450 67 56 84% 79 56 71% 61 35 57% 32 19 59% 24 10 42% 16 3 19% 11 3 27% 8 2 25% 10 9 90% 9 6 67%
Clostridium innocuum M23732 68 53 78% 88 58 66% 59 33 56% 35 25 71% 33 9 27% 15 5 33% 11 6 55% 8 2 25% 7 6 86% 11 8 73%
Clostridium perfringens M69264 72 60 83% 83 62 75% 63 30 48% 36 20 56% 24 13 54% 16 7 44% 12 4 33% 8 2 25% 10 4 40% 8 3 38%
Clostridium tetani X74770 72 54 75% 83 58 70% 62 27 44% 37 23 62% 23 4 17% 16 9 56% 11 2 18% 9 0 0% 9 4 44% 9 3 33%
Comamonas testosteroni M11224 73 50 68% 86 44 51% 58 30 52% 35 28 80% 32 23 72% 18 13 72% 13 10 77% 8 5 63% 11 6 55% 9 3 33%
Corynebacterium diphtheriae X84248 65 43 66% 82 41 50% 63 19 30% 40 12 30% 23 1 4% 17 2 12% 11 5 45% 10 4 40% 12 10 83% 7 2 29%
Coxiella burnetii M21291 69 47 68% 82 45 55% 53 26 49% 35 20 57% 33 15 45% 17 12 71% 8 4 50% 6 3 50% 10 10 100% 6 6 100%
Cristispira CP1 U42638 72 47 65% 84 39 46% 54 21 39% 32 21 66% 30 16 53% 15 14 93% 13 4 31% 7 4 57% 9 6 67% 10 0 0%
Deferribacter thermophilus U75602 75 57 76% 93 63 68% 60 44 73% 35 23 66% 29 16 55% 21 14 67% 13 8 62% 7 5 71% 9 9 100% 10 5 50%
Deinococcus radiodurans M21413 75 53 71% 85 62 73% 53 22 42% 38 20 53% 28 15 54% 15 15 100% 13 9 69% 9 8 89% 11 8 73% 7 0 0%
Desulfovibrio desulfuricans M34113 71 56 79% 91 61 67% 56 37 66% 36 30 83% 31 17 55% 16 9 56% 11 8 73% 9 6 67% 6 2 33% 10 5 50%
Dichelobacter nodosus M35016 73 55 75% 91 59 65% 56 34 61% 38 25 66% 30 15 50% 17 12 71% 11 9 82% 10 2 20% 11 4 36% 9 3 33%
Edwardsiella tarda AF015259 69 53 77% 81 48 59% 53 36 68% 34 27 79% 30 21 70% 19 17 89% 12 5 42% 9 4 44% 11 10 91% 9 6 67%
Enterococcus faecalis Y18293 68 63 93% 80 72 90% 52 32 62% 36 29 81% 27 16 59% 17 14 82% 9 4 44% 4 2 50% 7 7 100% 8 5 63%
Enterococcus faecium AF070223 69 62 90% 79 64 81% 58 32 55% 38 29 76% 30 16 53% 21 14 67% 12 4 33% 8 2 25% 9 7 78% 9 5 56%
environ.Eubacteria clone W15 NPA 67 52 78% 72 54 75% 60 36 60% 36 27 75% 30 13 43% 17 10 59% 10 6 60% 7 7 100% 13 12 92% 6 1 17%
Epulopiscium sp. M99572 66 51 77% 80 49 61% 61 34 56% 30 16 53% 22 7 32% 17 6 35% 12 0 0% 8 0 0% 10 5 50% 6 3 50%
Erysipelothrix rhusiopathiae M23728 71 58 82% 82 54 66% 54 32 59% 39 17 44% 32 19 59% 14 7 50% 12 1 8% 7 0 0% 9 5 56% 7 7 100%
Escherichia coli J01695 74 51 69% 91 53 58% 59 36 61% 36 27 75% 33 24 73% 19 17 89% 12 5 42% 9 4 44% 12 10 83% 9 6 67%
Eubacterium brachy Z36272 70 46 66% 76 45 59% 60 23 38% 38 31 82% 26 14 54% 18 10 56% 12 4 33% 5 1 20% 10 3 30% 7 1 14%
Francisella tularensis Z21931 72 42 58% 86 47 55% 56 23 41% 39 20 51% 27 5 19% 19 14 74% 12 9 75% 11 2 18% 11 5 45% 6 3 50%
Frankia sp. M55343 70 43 61% 86 51 59% 65 34 52% 36 21 58% 22 8 36% 17 9 53% 11 3 27% 10 4 40% 12 2 17% 7 0 0%
Fusobacterium necrophorum X74408 67 37 55% 80 45 56% 63 31 49% 31 16 52% 26 14 54% 17 12 71% 12 3 25% 7 4 57% 10 6 60% 8 2 25%
Fusobacterium nucleatum subsp. nucleatum M58683 67 49 73% 81 44 54% 63 37 59% 38 19 50% 27 13 48% 17 12 71% 9 7 78% 7 2 29% 8 5 63% 6 2 33%
Gemmata obscuriglobus X56305 72 60 83% 68 41 60% 58 36 62% 30 22 73% 26 13 50% 15 10 67% 19 10 53% 8 6 75% 9 4 44% 9 5 56%
Geotoga subterranea L10659 74 65 88% 82 62 76% 54 28 52% 34 20 59% 31 18 58% 16 14 88% 14 10 71% 11 6 55% 9 6 67% 9 3 33%
Gluconacetobacter liquefaciens X75617 76 36 47% 81 37 46% 58 32 55% 33 23 70% 25 16 64% 15 9 60% 13 5 38% 14 8 57% 9 9 100% 10 8 80%
Haemobartonella felis U95297 64 40 63% 75 47 63% 50 21 42% 32 11 34% 22 5 23% 12 2 17% 7 0 0% 2 0 0% 9 3 33% 6 2 33%
Haemophilus influenzae X87977 70 44 63% 80 45 56% 55 22 40% 36 13 36% 31 13 42% 12 11 92% 9 2 22% 5 0 0% 10 2 20% 6 3 50%
Haemophilus influenzae (operons A-F) U32741 U32744 U32755 U32847 U32697 U32708 75 49 65% 88 54 61% 57 29 51% 36 15 42% 34 16 47% 17 16 94% 12 5 42% 9 0 0% 11 2 18% 9 3 33%
Halomonas halodenitrificans L04942 75 44 59% 87 52 60% 54 17 31% 32 17 53% 32 9 28% 19 5 26% 12 2 17% 9 5 56% 10 5 50% 8 3 38%
Helicobacter pylori M88157 70 48 69% 81 48 59% 56 27 48% 37 18 49% 25 10 40% 16 13 81% 16 9 56% 8 3 38% 6 0 0% 8 0 0%
Heliobacterium chlorum M11212 71 49 69% 79 58 73% 64 35 55% 36 15 42% 25 9 36% 16 13 81% 12 5 42% 8 4 50% 10 6 60% 8 3 38%
Holophaga foetida X77215 68 49 72% 87 43 49% 60 28 47% 34 25 74% 29 17 59% 18 14 78% 12 7 58% 8 4 50% 6 4 67% 9 4 44%
Isosphaera pallida X64372 71 49 69% 76 49 64% 52 25 48% 34 26 76% 24 11 46% 14 11 79% 10 8 80% 5 5 100% 9 9 100% 5 3 60%
Klebsiella pneumoniae X80684 68 44 65% 80 41 51% 52 32 62% 35 19 54% 26 15 58% 15 6 40% 9 7 78% 5 3 60% 9 5 56% 6 3 50%
Lactobacillus acidophilus M58802 70 55 79% 81 57 70% 59 30 51% 34 16 47% 31 9 29% 22 15 68% 11 5 45% 4 2 50% 7 7 100% 9 4 44%
Lactococcus lactis subsp. lactis AE006456 74 63 85% 91 62 68% 57 37 65% 36 21 58% 29 19 66% 19 18 95% 11 6 55% 8 6 75% 9 8 89% 10 7 70%
Legionella pneumophila M59157 68 44 65% 82 48 59% 55 23 42% 35 19 54% 32 18 56% 19 7 37% 10 1 10% 8 3 38% 10 10 100% 7 3 43%
Leptonema illini M88719 74 49 66% 88 55 63% 65 31 48% 33 16 48% 21 5 24% 18 13 72% 12 10 83% 8 6 75% 9 5 56% 9 3 33%
Leptospira interrogans X17547 74 64 86% 84 69 82% 61 42 69% 37 27 73% 22 16 73% 15 12 80% 12 4 33% 8 2 25% 12 9 75% 8 6 75%
Leptospirillum ferriphilum AF356830 67 43 64% 84 49 58% 56 23 41% 32 9 28% 31 14 45% 18 7 39% 11 7 64% 9 2 22% 6 3 50% 8 3 38%
Listeria monocytogenes M58822 70 52 74% 81 47 58% 55 24 44% 35 21 60% 30 17 57% 19 4 21% 13 0 0% 6 0 0% 7 2 29% 9 5 56%
Mesorhizobium loti AP003001 73 54 74% 79 57 72% 59 38 64% 32 27 84% 26 16 62% 17 14 82% 15 10 67% 12 9 75% 8 8 100% 11 8 73%
Methylobacterium sp. Z23160 68 33 49% 70 34 49% 55 15 27% 31 8 26% 25 10 40% 16 7 44% 15 8 53% 12 5 42% 9 6 67% 10 4 40%
Methylococcus capsulatus X72771 68 30 44% 84 40 48% 55 17 31% 35 9 26% 30 11 37% 18 8 44% 8 1 13% 6 0 0% 8 0 0% 6 0 0%
Micrococcus luteus M38242 70 48 69% 76 40 53% 62 43 69% 39 28 72% 18 5 28% 17 10 59% 12 9 75% 9 4 44% 9 5 56% 7 3 43%
Microcystis aeruginosa U03402 Z28699 65 44 68% 72 41 57% 61 26 43% 33 12 36% 22 6 27% 17 9 53% 16 9 56% 12 3 25% 9 3 33% 8 5 63%
Mycobacterium avium X52918 66 36 55% 77 38 49% 58 29 50% 40 13 33% 25 2 8% 17 7 41% 11 2 18% 10 0 0% 12 5 42% 7 3 43%
Mycobacterium leprae X56657 71 31 44% 86 31 36% 61 16 26% 42 4 10% 29 3 10% 18 0 0% 11 0 0% 9 0 0% 11 0 0% 8 0 0%
Mycobacterium tuberculosis X52917 67 31 46% 77 30 39% 57 14 25% 42 12 29% 25 2 8% 18 0 0% 11 0 0% 9 0 0% 11 0 0% 8 0 0%
Mycoplasma capricolum X00921 69 41 59% 90 53 59% 59 22 37% 33 11 33% 31 12 39% 13 2 15% 12 5 42% 7 2 29% 8 6 75% 11 5 45%
Mycoplasma gallisepticum M22441 66 40 61% 93 48 52% 57 28 49% 30 16 53% 28 9 32% 21 13 62% 9 7 78% 6 2 33% 8 5 63% 11 3 27%
Mycoplasma genitalium U39694 68 55 81% 95 67 71% 57 32 56% 30 22 73% 28 12 43% 20 9 45% 9 5 56% 6 2 33% 8 4 50% 8 0 0%
Mycoplasma hyopneumoniae Y00149 69 54 78% 89 65 73% 59 33 56% 38 22 58% 30 25 83% 16 15 94% 11 7 64% 8 7 88% 8 7 88% 9 4 44%
Mycoplasma mycoides M23943 63 33 52% 80 41 51% 54 19 35% 32 10 31% 31 6 19% 14 0 0% 11 5 45% 6 2 33% 7 0 0% 7 0 0%
Mycoplasma pneumoniae M29061 65 50 77% 90 60 67% 56 34 61% 30 23 77% 27 7 26% 21 8 38% 9 5 56% 5 2 40% 6 5 83% 6 0 0%
Myxococcus xanthus M34114 75 49 65% 88 51 58% 59 26 44% 37 18 49% 29 13 45% 18 3 17% 15 9 60% 4 3 75% 6 4 67% 6 5 83%
Neisseria gonorrhoeae X07714 73 54 74% 87 50 57% 59 28 47% 35 21 60% 32 15 47% 18 17 94% 12 10 83% 9 6 67% 11 11 100% 9 6 67%
Neisseria meningitidis AE002364 73 60 82% 88 67 76% 59 37 63% 35 23 66% 32 15 47% 18 17 94% 12 10 83% 9 6 67% 11 11 100% 9 6 67%
Nocardia asteroides X80606 65 25 38% 76 34 45% 61 21 34% 38 7 18% 23 1 4% 17 0 0% 11 0 0% 10 1 10% 12 5 42% 7 0 0%
Oscillatoria agardhii X84811 67 52 78% 78 51 65% 62 27 44% 33 24 73% 23 12 52% 15 11 73% 16 13 81% 11 7 64% 10 6 60% 10 8 80%
Pasteurella multocida M35018 71 48 68% 85 49 58% 56 17 30% 36 12 33% 34 17 50% 18 11 61% 10 1 10% 7 3 43% 10 5 50% 7 3 43%
Petrotoga miotherma L10657 68 51 75% 70 51 73% 52 27 52% 31 14 45% 20 7 35% 11 5 45% 9 2 22% 10 5 50% 5 0 0% 6 0 0%
Pirellula marina X62912 67 41 61% 79 42 53% 57 24 42% 35 13 37% 17 5 29% 14 5 36% 14 0 0% 11 0 0% 9 0 0% 9 0 0%
Pirellula staleyi M34126 73 55 75% 82 61 74% 56 28 50% 36 23 64% 26 14 54% 18 12 67% 13 2 15% 13 0 0% 8 0 0% 9 4 44%
Planctomycetaceae Schlesner 670 X81948 71 55 77% 78 56 72% 57 32 56% 31 20 65% 26 16 62% 21 21 100% 14 7 50% 12 7 58% 8 6 75% 11 5 45%
Plesiomonas shigelloides X74688 71 46 65% 82 44 54% 52 26 50% 33 14 42% 28 15 54% 14 12 86% 9 2 22% 5 1 20% 10 8 80% 6 6 100%
Pleurocapsa sp. X78681 66 45 68% 78 37 47% 61 26 43% 33 17 52% 22 2 9% 18 5 28% 16 11 69% 11 5 45% 10 8 80% 10 8 80%
Porphyromonas gingivalis L16492 69 46 67% 78 37 47% 54 25 46% 41 20 49% 31 6 19% 14 0 0% 9 5 56% 6 2 33% 8 0 0% 6 0 0%
Proteus vulgaris X07652 73 56 77% 92 66 72% 59 33 56% 36 22 61% 33 26 79% 19 18 95% 11 5 45% 10 4 40% 11 9 82% 9 6 67%
Pseudomonas aeruginosa M34133 71 46 65% 79 42 53% 56 26 46% 37 19 51% 30 20 67% 18 16 89% 10 3 30% 5 0 0% 9 5 56% 8 3 38%
Pseudomonas putida D84020 73 59 81% 87 54 62% 58 27 47% 38 28 74% 30 16 53% 18 14 78% 11 5 45% 10 4 40% 11 11 100% 9 6 67%
Pseudomonas sp. U37339 68 44 65% 82 49 60% 56 36 64% 38 29 76% 30 18 60% 18 16 89% 11 3 27% 9 0 0% 10 5 50% 6 3 50%
Psychrobacter pacificensis AB016054 72 46 64% 89 42 47% 58 25 43% 37 28 76% 30 12 40% 19 17 89% 11 8 73% 10 3 30% 12 10 83% 8 6 75%
Rhodobium orientis D30792 69 54 78% 69 48 70% 57 35 61% 32 26 81% 26 17 65% 17 15 88% 15 10 67% 12 9 75% 9 9 100% 8 8 100%
Rhodoblastus acidophilus M34128 70 48 69% 71 42 59% 59 31 53% 33 20 61% 26 14 54% 16 14 88% 15 11 73% 9 6 67% 7 7 100% 10 8 80%
Rhodococcus erythropolis AF001265 73 45 62% 82 43 52% 64 35 55% 38 19 50% 22 10 45% 16 11 69% 11 3 27% 10 1 10% 13 5 38% 7 1 14%
Rickettsia bellii U11014 74 54 73% 82 56 68% 57 33 58% 38 27 71% 29 19 66% 16 16 100% 13 6 46% 13 5 38% 8 5 63% 10 3 30%
Rickettsia prowazekii M21789 74 54 73% 82 57 70% 57 35 61% 38 27 71% 29 15 52% 16 15 94% 13 8 62% 13 6 46% 8 5 63% 10 8 80%
Rickettsia rickettsii L36217 69 49 71% 73 46 63% 55 33 60% 38 27 71% 29 15 52% 16 15 94% 13 9 69% 13 6 46% 8 6 75% 9 8 89%
Salmonella typhimurium X80681 71 38 54% 89 44 49% 56 27 48% 37 20 54% 32 21 66% 19 18 95% 12 5 42% 9 4 44% 11 9 82% 9 6 67%
Serratia marcescens M59160 69 51 74% 80 45 56% 58 34 59% 35 20 57% 33 21 64% 19 13 68% 11 2 18% 8 1 13% 10 9 90% 7 6 86%
Shewanella putrefaciens X81623 73 57 78% 86 60 70% 57 30 53% 36 21 58% 33 19 58% 19 15 79% 11 5 45% 10 4 40% 11 9 82% 9 6 67%
Shigella dysenteriae X96966 69 45 65% 80 42 53% 56 34 61% 37 27 73% 32 24 75% 18 17 94% 12 5 42% 9 4 44% 10 10 100% 9 6 67%
Spirochaeta aurantia M57740 77 54 70% 90 54 60% 54 34 63% 37 17 46% 30 18 60% 16 10 63% 9 7 78% 4 2 50% 8 7 88% 7 6 86%
Staphylococcus aureus L36472 76 61 80% 87 60 69% 56 24 43% 35 17 49% 31 11 35% 18 14 78% 12 5 42% 8 4 50% 9 7 78% 10 3 30%
Streptobacillus moniliformis Z35305 67 37 55% 81 35 43% 58 23 40% 38 13 34% 26 11 42% 15 11 73% 12 5 42% 8 4 50% 9 2 22% 8 0 0%
Streptococcus mutans X58303 64 50 78% 71 43 61% 48 18 38% 31 23 74% 23 7 30% 16 10 63% 7 1 14% 4 0 0% 10 8 80% 5 5 100%
Streptococcus pneumoniae X58312 63 50 79% 70 45 64% 51 22 43% 31 24 77% 23 8 35% 16 10 63% 7 1 14% 4 0 0% 7 6 86% 7 7 100%
Streptococcus pyogenes X59029 61 39 64% 66 31 47% 50 14 28% 30 13 43% 21 7 33% 14 8 57% 7 0 0% 4 0 0% 8 0 0% 6 0 0%
Streptomyces acidiscabies D63865 71 51 72% 85 47 55% 62 31 50% 39 24 62% 26 14 54% 16 8 50% 10 2 20% 10 1 10% 14 10 71% 7 5 71%
Streptomyces albidoflavus Z76676 69 49 71% 75 40 53% 61 29 48% 40 21 53% 25 9 36% 16 13 81% 10 5 50% 10 5 50% 14 8 57% 7 2 29%
Streptomyces albus X53163 57 42 74% 70 44 63% 47 29 62% 36 26 72% 19 7 37% 13 5 38% 7 0 0% 4 0 0% 12 0 0% 6 0 0%
Streptomyces ambofaciens M27245 71 52 73% 85 45 53% 62 27 44% 39 20 51% 26 11 42% 16 8 50% 10 5 50% 9 4 44% 14 8 57% 8 3 38%
Streptomyces bikiniensis X79851 70 43 61% 85 44 52% 62 32 52% 40 21 53% 25 15 60% 16 16 100% 10 5 50% 10 1 10% 14 5 36% 7 2 29%
Streptomyces bluensis X79324 71 49 69% 84 47 56% 63 36 57% 40 24 60% 25 13 52% 15 11 73% 10 3 30% 9 4 44% 14 8 57% 8 3 38%
Streptomyces bottropensis D63868 71 52 73% 85 50 59% 62 33 53% 39 19 49% 26 12 46% 16 11 69% 10 5 50% 9 4 44% 14 8 57% 8 3 38%
Streptomyces brasiliensis X53162 62 41 66% 70 36 51% 47 23 49% 37 21 57% 16 3 19% 13 10 77% 7 2 29% 6 0 0% 10 5 50% 6 3 50%
Streptomyces caelestis X80824 71 51 72% 84 44 52% 62 33 53% 40 21 53% 25 10 40% 16 8 50% 10 5 50% 9 4 44% 14 8 57% 8 3 38%
Streptomyces coelicolor Y00411 70 48 69% 82 47 57% 62 27 44% 39 18 46% 25 10 40% 16 8 50% 10 3 30% 10 4 40% 13 13 100% 8 6 75%
Streptomyces diastaticus X53161 59 40 68% 67 38 57% 47 24 51% 34 19 56% 13 5 38% 8 2 25% 5 5 100% 7 2 29% 10 5 50% 5 2 40%
Streptomyces diastatochromogenes D63867 71 53 75% 85 51 60% 62 26 42% 39 22 56% 26 11 42% 16 8 50% 10 5 50% 9 4 44% 14 8 57% 8 3 38%
Streptomyces espinosus X80826 71 52 73% 83 45 54% 62 23 37% 40 16 40% 25 11 44% 16 11 69% 10 10 100% 9 5 56% 14 3 21% 8 0 0%
Streptomyces eurythermus D63870 71 49 69% 83 44 53% 63 27 43% 40 21 53% 25 10 40% 16 8 50% 10 5 50% 10 5 50% 14 8 57% 7 2 29%
Streptomyces felleus Z76681 69 49 71% 75 40 53% 61 29 48% 40 21 53% 25 9 36% 16 13 81% 10 5 50% 10 5 50% 14 8 57% 7 2 29%
Streptomyces galbus X79325 70 46 66% 83 45 54% 62 34 55% 40 21 53% 25 10 40% 15 3 20% 10 0 0% 10 1 10% 14 5 36% 7 2 29%
Streptomyces glaucescens X79322 70 45 64% 82 40 49% 64 30 47% 40 23 58% 25 10 40% 16 3 19% 10 3 30% 9 4 44% 14 8 57% 8 3 38%
Streptomyces gougerotii Z76687 69 49 71% 76 42 55% 60 36 60% 41 24 59% 24 15 63% 16 16 100% 11 6 55% 9 4 44% 15 9 60% 7 2 29%
Streptomyces griseus X61478 70 38 54% 84 41 49% 63 31 49% 39 16 41% 26 5 19% 14 5 36% 10 0 0% 10 1 10% 14 5 36% 7 2 29%
Streptomyces hygroscopicus X79853 71 50 70% 84 48 57% 62 34 55% 40 19 48% 25 7 28% 15 3 20% 10 0 0% 10 1 10% 14 5 36% 7 2 29%
Streptomyces intermedius Z76686 68 49 72% 76 41 54% 60 36 60% 40 24 60% 25 16 64% 16 16 100% 10 5 50% 10 5 50% 14 8 57% 7 2 29%
Streptomyces lavendulae X53173 61 46 75% 66 48 73% 44 32 73% 37 25 68% 17 10 59% 12 8 67% 7 0 0% 6 0 0% 10 5 50% 6 3 50%
Streptomyces limosus Z76679 69 49 71% 75 40 53% 61 29 48% 40 21 53% 25 9 36% 16 13 81% 10 5 50% 10 5 50% 14 8 57% 7 2 29%
Streptomyces lincolnensis X79854 71 46 65% 84 43 51% 62 34 55% 41 19 46% 24 10 42% 15 6 40% 11 4 36% 9 3 33% 15 4 27% 7 0 0%
Streptomyces macrosporus Z68099 69 52 75% 79 51 65% 59 29 49% 39 24 62% 27 10 37% 16 10 63% 10 2 20% 10 1 10% 13 5 38% 7 2 29%
Streptomyces mashuensis X79323 69 52 75% 81 50 62% 64 40 63% 39 28 72% 25 18 72% 17 17 100% 10 5 50% 9 4 44% 13 7 54% 8 3 38%
Streptomyces megasporus Z68100 67 44 66% 82 39 48% 61 34 56% 40 23 58% 26 13 50% 16 13 81% 11 2 18% 8 1 13% 16 5 31% 7 2 29%
Streptomyces neyagawaensis D63869 71 48 68% 85 57 67% 62 33 53% 39 18 46% 26 4 15% 16 5 31% 10 2 20% 9 0 0% 14 5 36% 8 3 38%
Streptomyces nodosus AF114033 71 48 68% 84 50 60% 62 39 63% 39 23 59% 26 10 38% 16 13 81% 10 2 20% 10 0 0% 14 0 0% 7 0 0%
Streptomyces odorifer Z76682 69 49 71% 76 40 53% 61 29 48% 40 21 53% 25 9 36% 16 13 81% 10 5 50% 10 5 50% 14 8 57% 7 2 29%
Streptomyces ornatus X79326 70 37 53% 84 33 39% 60 28 47% 39 16 41% 26 5 19% 15 5 33% 10 0 0% 9 0 0% 14 5 36% 8 3 38%
Streptomyces pseudogriseolus X80827 70 48 69% 84 46 55% 62 33 53% 40 21 53% 25 13 52% 16 16 100% 10 5 50% 9 4 44% 14 8 57% 8 3 38%
Streptomyces purpureus X53170 56 37 66% 68 35 51% 45 26 58% 37 14 38% 18 6 33% 8 8 100% 5 0 0% 6 0 0% 9 0 0% 5 0 0%
Streptomyces rimosus X62884 70 44 63% 84 47 56% 62 34 55% 38 16 42% 23 8 35% 15 8 53% 10 7 70% 9 2 22% 14 5 36% 8 3 38%
Streptomyces rutgersensis Z76688 69 49 71% 76 42 55% 60 36 60% 41 24 59% 24 15 63% 16 16 100% 11 6 55% 9 4 44% 15 9 60% 7 2 29%
Streptomyces sampsonii D63871 71 49 69% 84 45 54% 63 31 49% 40 21 53% 25 9 36% 16 13 81% 10 5 50% 10 5 50% 14 8 57% 7 2 29%
Streptomyces scabiei D63862 73 58 79% 85 51 60% 62 26 42% 39 22 56% 26 11 42% 17 9 53% 10 5 50% 9 4 44% 13 7 54% 8 3 38%
Streptomyces setonii D63872 71 48 68% 85 46 54% 63 34 54% 39 21 54% 26 16 62% 15 11 73% 10 3 30% 10 1 10% 14 5 36% 7 2 29%
Streptomyces sp. D63866 71 48 68% 84 45 54% 62 33 53% 39 25 64% 26 14 54% 16 8 50% 10 2 20% 10 1 10% 14 9 64% 7 5 71%
Streptomyces subrutilus X80825 71 45 63% 84 42 50% 62 34 55% 40 21 53% 25 15 60% 16 12 75% 10 2 20% 10 1 10% 13 5 38% 7 2 29%
Streptomyces tendae D63873 71 51 72% 84 49 58% 62 36 58% 40 26 65% 25 16 64% 16 16 100% 10 5 50% 9 4 44% 14 3 21% 8 0 0%
Streptomyces thermodiastaticus Z68101 69 48 70% 76 35 46% 61 30 49% 40 20 50% 25 9 36% 16 3 19% 9 3 33% 9 4 44% 13 3 23% 8 0 0%
Streptomyces thermolineatus Z68097 69 51 74% 79 50 63% 60 25 42% 39 18 46% 26 5 19% 16 10 63% 10 2 20% 10 0 0% 14 5 36% 7 3 43%
Streptomyces thermoviolaceus Z68096 69 49 71% 78 40 51% 61 28 46% 40 23 58% 25 10 40% 16 8 50% 10 5 50% 9 4 44% 14 3 21% 8 0 0%
Streptomyces thermovulgaris Z68098 72 49 68% 78 48 62% 60 30 50% 42 28 67% 24 11 46% 16 8 50% 11 4 36% 9 3 33% 15 9 60% 7 0 0%
Synechococcus sp. PCC 6301 X03538 69 41 59% 81 45 56% 61 39 64% 33 18 55% 23 18 78% 18 11 61% 16 9 56% 11 6 55% 10 2 20% 10 0 0%
Synechocystis sp. PCC 6803 D64000 D90916 71 48 68% 81 55 68% 63 27 43% 34 16 47% 22 2 9% 17 9 53% 16 11 69% 11 5 45% 8 5 63% 11 5 45%
Thermomicrobium roseum M34115 70 52 74% 89 57 64% 62 21 34% 32 16 50% 24 10 42% 22 4 18% 12 0 0% 5 0 0% 9 0 0% 10 3 30%
Thermotoga maritima M21774 76 61 80% 95 71 75% 58 29 50% 36 27 75% 30 13 43% 19 15 79% 12 8 67% 8 6 75% 11 11 100% 9 7 78%
Thermus aquaticus L09663 70 59 84% 81 56 69% 49 26 53% 41 25 61% 31 20 65% 14 9 64% 12 7 58% 9 7 78% 12 9 75% 7 4 57%
Thermus thermophilus X07998 79 59 75% 85 52 61% 52 21 40% 42 31 74% 31 16 52% 12 5 42% 12 7 58% 9 7 78% 13 5 38% 6 4 67%
Treponema pallidum (rRNA A) AE001204 76 60 79% 92 65 71% 54 34 63% 37 24 65% 32 21 66% 18 11 61% 11 4 36% 9 4 44% 10 2 20% 9 0 0%
Tropheryma whipplei X99636 71 54 76% 85 56 66% 64 31 48% 40 24 60% 23 9 39% 17 13 76% 11 7 64% 10 3 30% 12 10 83% 7 5 71%
Ureaplasma urealyticum AE002112 70 51 73% 92 62 67% 55 37 67% 29 16 55% 28 15 54% 22 13 59% 9 6 67% 6 2 33% 6 4 67% 9 3 33%
Vibrio cholerae X76337 73 57 78% 88 67 76% 57 30 53% 37 19 51% 32 21 66% 19 19 100% 11 5 45% 10 4 40% 11 11 100% 9 4 44%
Vibrio parahaemolyticus X56580 64 43 67% 80 32 40% 56 25 45% 38 13 34% 31 4 13% 17 9 53% 8 2 25% 6 1 17% 10 10 100% 6 4 67%
Xanthomonas albilineans X95918 69 53 77% 82 45 55% 59 29 49% 35 14 40% 32 2 6% 18 10 56% 11 7 64% 10 2 20% 9 1 11% 9 3 33%
Xanthomonas campestris NPA 68 47 69% 79 45 57% 58 37 64% 37 24 65% 32 12 38% 18 11 61% 11 7 64% 10 2 20% 8 5 63% 6 3 50%
Xylella fastidiosa AE003861 71 42 59% 87 48 55% 60 34 57% 36 8 22% 32 5 16% 18 10 56% 11 7 64% 10 2 20% 10 4 40% 9 3 33%
Yersinia pestis L37604 68 49 72% 82 53 65% 56 30 54% 36 21 58% 33 22 67% 18 15 83% 11 3 27% 7 1 14% 10 9 90% 6 4 67%
Yersinia pseudotuberculosis Z21939 70 50 71% 84 51 61% 57 35 61% 36 16 44% 33 21 64% 19 15 79% 11 3 27% 7 1 14% 10 8 80% 6 6 100%
Eukaryotic Chloroplast   2-10 11-20 21-30 31-40 41-50 51-60 61-70 71-80 81-90 91-100
C1 P A C P A C P A C P A C P A C P A C P A C P A C P A C P A
Apodanthes sp NPA 64 43 67% 84 61 73% 58 29 50% 33 16 48% 23 15 65% 18 9 50% 9 3 33% 13 6 46% 12 6 50% 8 2 25%
Astasia longa X14386 68 36 53% 74 38 51% 60 19 32% 38 12 32% 25 2 8% 17 8 47% 15 5 33% 11 5 45% 13 7 54% 11 3 27%
Babesia bovis U06105 55 24 44% 80 33 41% 59 24 41% 32 18 56% 22 9 41% 15 5 33% 12 5 42% 10 4 40% 11 10 91% 11 4 36%
Chlamydomonas humicola AF374186 63 41 65% 70 38 54% 49 18 37% 30 9 30% 22 7 32% 16 10 63% 7 7 100% 7 7 100% 6 5 83% 6 3 50%
Chlamydomonas reinhardtii J01395 71 41 58% 74 46 62% 59 37 63% 33 25 76% 29 16 55% 13 7 54% 14 5 36% 11 5 45% 7 0 0% 10 0 0%
Chlorella vulgaris AB001684 70 52 74% 79 52 66% 68 54 79% 34 26 76% 21 17 81% 17 13 76% 16 10 63% 10 10 100% 9 7 78% 9 7 78%
Corethron criophilum NPA 68 45 66% 75 47 63% 61 27 44% 30 25 83% 24 11 46% 18 7 39% 15 7 47% 11 7 64% 9 6 67% 10 4 40%
Cryptomonas sp. X56805 68 37 54% 79 48 61% 58 31 53% 34 10 29% 24 11 46% 18 8 44% 15 5 33% 13 2 15% 9 5 56% 10 0 0%
Cyanidium caldarium X52985 70 33 47% 78 41 53% 59 31 53% 33 16 48% 24 10 42% 18 18 100% 14 6 43% 13 8 62% 11 5 45% 8 3 38%
Cyanophora paradoxa X81840 70 49 70% 82 50 61% 64 42 66% 32 20 63% 23 9 39% 18 14 78% 12 7 58% 8 1 13% 12 5 42% 8 2 25%
Cynomorium coccineum U67743 66 28 42% 73 26 36% 56 13 23% 30 0 0% 24 0 0% 14 0 0% 15 5 33% 10 2 20% 11 5 45% 9 3 33%
Cytinus ruber U47845 66 38 58% 75 41 55% 59 31 53% 34 16 47% 23 9 39% 17 3 18% 15 2 13% 11 4 36% 10 0 0% 10 4 40%
Emiliania huxleyi X82156 67 47 70% 76 48 63% 60 37 62% 32 22 69% 26 13 50% 15 12 80% 17 12 71% 11 6 55% 9 2 22% 9 4 44%
Euglena gracilis X12890 V00159 69 26 38% 83 28 34% 59 8 14% 35 12 34% 25 2 8% 14 3 21% 11 0 0% 6 0 0% 11 0 0% 8 0 0%
Glaucocystis nostochinearum X82496 71 52 73% 82 48 59% 59 25 42% 33 29 88% 21 11 52% 22 12 55% 12 7 58% 8 2 25% 7 5 71% 10 7 70%
Gloeochaete wittrockiana X82495 71 48 68% 83 49 59% 60 36 60% 34 24 71% 22 9 41% 19 12 63% 13 7 54% 8 2 25% 7 5 71% 9 6 67%
Heterosigma akashiwo M82860 66 44 67% 80 49 61% 64 35 55% 34 20 59% 27 12 44% 18 2 11% 14 5 36% 6 2 33% 11 3 27% 9 0 0%
Hydnora africana U67745 65 42 65% 77 48 62% 63 26 41% 29 19 66% 20 11 55% 18 14 78% 12 7 58% 10 4 40% 8 4 50% 5 2 40%
Marchantia polymorpha X04465 64 48 75% 79 48 61% 56 33 59% 36 17 47% 23 12 52% 15 4 27% 14 5 36% 12 6 50% 8 0 0% 10 5 50%
Mitrastema yamamotoi U67742 64 30 47% 73 29 40% 55 22 40% 30 8 27% 22 8 36% 17 9 53% 18 2 11% 8 0 0% 8 0 0% 9 0 0%
Nicotiana tabacum V00165 66 38 58% 82 34 41% 56 26 46% 33 14 42% 25 10 40% 14 11 79% 16 7 44% 12 2 17% 8 4 50% 9 0 0%
Palmaria palmata Z18289 67 39 58% 77 37 48% 57 28 49% 33 22 67% 23 11 48% 17 10 59% 16 9 56% 12 10 83% 9 3 33% 11 5 45%
Pilostyles thurberi U67741 57 19 33% 81 28 35% 49 15 31% 34 16 47% 25 7 28% 13 8 62% 14 9 64% 12 2 17% 7 0 0% 7 4 57%
Plasmodium falciparum (plastid-like) X57167 X95275 69 29 42% 83 30 36% 50 19 38% 33 9 27% 27 8 30% 10 4 40% 11 4 36% 9 0 0% 9 0 0% 10 0 0%
Plasmodium vivax AF040974 39 18 46% 40 22 55% 29 15 52% 28 16 57% 21 12 57% 14 14 100% 10 10 100% 6 3 50% 6 4 67% 3 3 100%
Polytoma obtusum AF374187 59 40 68% 71 41 58% 47 14 30% 30 13 43% 26 13 50% 15 7 47% 8 0 0% 6 0 0% 5 0 0% 7 0 0%
Polytoma oviforme AF374188 64 47 73% 68 41 60% 48 23 48% 32 21 66% 24 17 71% 12 12 100% 7 7 100% 5 5 100% 8 8 100% 5 3 60%
Polytoma uvella AF374189 70 35 50% 95 44 46% 63 12 19% 31 11 35% 29 7 24% 17 8 47% 10 3 30% 9 5 56% 3 1 33% 7 0 0%
Pylaiella littoralis X14873 64 39 61% 81 38 47% 59 14 24% 31 17 55% 23 2 9% 19 5 26% 14 2 14% 6 0 0% 12 0 0% 8 0 0%
Ricinus communis L37580 64 39 61% 73 33 45% 61 31 51% 34 13 38% 23 12 52% 15 10 67% 15 3 20% 12 4 33% 8 1 13% 8 0 0%
Skeletonema pseudocostatum X82155 68 45 66% 76 45 59% 61 34 56% 29 24 83% 24 6 25% 18 10 56% 14 7 50% 10 2 20% 10 5 50% 9 3 33%
Toxoplasma gondii U87145 62 28 45% 74 32 43% 66 21 32% 43 15 35% 16 2 13% 13 4 31% 24 11 46% 13 5 38% 13 6 46% 8 5 63%
Zea mays Z00028 69 42 61% 81 44 54% 62 25 40% 33 15 45% 23 8 35% 14 9 64% 16 11 69% 11 10 91% 8 4 50% 9 0 0%
Eukaryotic Mitochondrion;   2-10 11-20 21-30 31-40 41-50 51-60 61-70 71-80 81-90 91-100
C1 P A C P A C P A C P A C P A C P A C P A C P A C P A C P A
Acanthamoeba castellanii U03732 65 28 43% 69 32 46% 54 25 46% 28 11 39% 24 5 21% 18 5 28% 12 5 42% 13 5 38% 14 5 36% 8 2 25%
Afrixalus fornasini NPA 39 19 49% 36 15 42% 28 12 43% 8 0 0% 9 5 56% 9 5 56% 8 3 38% 6 0 0% 7 0 0% 0 0 0%
Albinaria caerulea X83390 28 11 39% 37 15 41% 28 10 36% 8 0 0% 7 3 43% 8 1 13% 5 0 0% 7 0 0% 5 0 0% 1 0 0%
Alligator mississippiensis L28074 29 15 52% 41 15 37% 23 7 30% 10 8 80% 10 3 30% 9 0 0% 7 0 0% 5 0 0% 6 0 0% 4 0 0%
Amblysomus hottentotus M95108 42 13 31% 42 20 48% 27 9 33% 12 3 25% 9 3 33% 5 3 60% 11 5 45% 6 0 0% 8 0 0% 1 0 0%
Anas platyrhynchos L16770 41 10 24% 44 18 41% 29 6 21% 14 0 0% 7 0 0% 7 0 0% 10 0 0% 4 0 0% 6 0 0% 2 0 0%
Anopheles gambiae L20934 33 16 48% 41 21 51% 27 9 33% 10 1 10% 4 0 0% 11 0 0% 8 0 0% 4 0 0% 4 0 0% 1 0 0%
Anopheles quadrimaculatus L04272 33 16 48% 41 21 51% 28 13 46% 10 1 10% 4 0 0% 10 0 0% 8 3 38% 4 3 75% 4 1 25% 1 0 0%
Antilocapra americana M55540 41 18 44% 47 18 38% 36 13 36% 10 4 40% 8 6 75% 8 6 75% 8 5 63% 7 2 29% 9 0 0% 2 0 0%
Apis mellifera L06178 S51650 28 5 18% 42 13 31% 26 8 31% 8 1 13% 11 0 0% 7 0 0% 3 0 0% 2 0 0% 1 0 0% 9 0 0%
Artemia franciscana X69067 31 3 10% 32 5 16% 20 1 5% 11 0 0% 9 0 0% 5 0 0% 4 0 0% 9 0 0% 5 0 0% 1 0 0%
Ascaris suum X54253 30 8 27% 30 13 43% 16 2 13% 10 0 0% 7 0 0% 9 0 0% 6 0 0% 3 3 100% 2 2 100% 4 4 100%
Aspergillus nidulans J01393 57 31 54% 69 42 61% 55 17 31% 30 10 33% 21 5 24% 14 7 50% 11 4 36% 14 0 0% 12 0 0% 6 0 0%
Asterina pectinifera D16387 35 17 49% 38 24 63% 26 13 50% 12 5 42% 3 0 0% 4 0 0% 9 2 22% 4 0 0% 3 0 0% 7 0 0%
Balaenoptera musculus X72204 40 25 63% 43 27 63% 26 17 65% 11 3 27% 8 6 75% 7 4 57% 11 8 73% 7 2 29% 10 0 0% 1 0 0%
Bos taurus J01394 V00654 39 25 64% 43 23 53% 29 15 52% 10 4 40% 8 3 38% 9 1 11% 9 8 89% 7 2 29% 9 0 0% 1 0 0%
Bufo boreas boreas Thesis, Goebel A. 37 9 24% 35 0 0% 28 6 21% 9 2 22% 10 3 30% 8 0 0% 9 0 0% 7 0 0% 5 0 0% 2 0 0%
Bufo peltocephalus Thesis, Goebel A. 35 11 31% 34 9 26% 26 8 31% 11 4 36% 8 7 88% 8 4 50% 9 6 67% 7 0 0% 5 0 0% 3 3 100%
Caenorhabditis elegans X54252 28 4 14% 34 11 32% 19 5 26% 9 0 0% 9 0 0% 10 0 0% 6 1 17% 4 4 100% 1 0 0% 4 3 75%
Cafeteria roenbergensis AF193903 52 15 29% 75 26 35% 48 21 44% 41 11 27% 23 9 39% 15 7 47% 15 8 53% 7 2 29% 15 5 33% 9 3 33%
Ceratophrys sp. Thesis, Goebel A. 33 17 52% 37 25 68% 28 13 46% 9 2 22% 9 5 56% 8 1 13% 7 2 29% 7 0 0% 5 0 0% 3 0 0%
Chlamydomonas eugametos AF008237 44 20 45% 61 31 51% 49 32 65% 27 15 56% 22 12 55% 17 9 53% 14 4 29% 11 2 18% 7 3 43% 8 3 38%
Chlamydomonas reinhardtii X54860 30 17 57% 52 20 38% 40 16 40% 17 8 47% 10 3 30% 11 0 0% 15 5 33% 9 1 11% 12 3 25% 3 0 0%
Chondrus crispus Z30950 Z47547 61 23 38% 73 27 37% 49 17 35% 35 13 37% 22 3 14% 17 3 18% 13 5 38% 4 2 50% 3 0 0% 4 0 0%
Chorthippus parallelus ESC X95574 24 6 25% 37 12 32% 27 2 7% 12 0 0% 8 0 0% 11 0 0% 4 0 0% 8 0 0% 10 0 0% 1 0 0%
Chorthippus parallelus NOR X95575 24 6 25% 37 12 32% 27 2 7% 12 0 0% 8 0 0% 11 0 0% 4 0 0% 8 0 0% 10 0 0% 1 0 0%
Chrysodidymus synuroideus NPA 62 26 42% 86 46 53% 50 14 28% 29 9 31% 28 13 46% 19 10 53% 16 9 56% 6 1 17% 18 5 28% 10 5 50%
Chrysodidymus synuroideus mg AF222718 64 31 48% 89 47 53% 56 21 38% 33 10 30% 28 11 39% 19 10 53% 16 14 88% 7 3 43% 17 10 59% 10 5 50%
Coscoroba coscoroba S76216 40 16 40% 44 25 57% 30 16 53% 15 8 53% 7 1 14% 7 4 57% 12 9 75% 4 2 50% 5 0 0% 3 0 0%
Coturnix coturnix X57245 33 18 55% 42 21 50% 25 13 52% 14 5 36% 7 2 29% 9 7 78% 11 4 36% 5 1 20% 4 0 0% 4 0 0%
Crithidia fasciculata X02548 9 4 44% 10 3 30% 13 8 62% 8 2 25% 4 0 0% 2 0 0% 1 0 0% 0 0 0% 0 0 0% 3 0 0%
Crossostoma lacustre M91245 39 14 36% 43 25 58% 31 16 52% 13 10 77% 10 9 90% 8 5 63% 11 2 18% 6 2 33% 6 4 67% 0 0 0%
Cygnus melancoryphus S76217 44 16 36% 43 27 63% 30 18 60% 15 5 33% 6 2 33% 8 6 75% 12 5 42% 4 0 0% 5 0 0% 3 0 0%
Cyprinus carpio X61010 35 20 57% 38 18 47% 34 15 44% 12 11 92% 10 9 90% 8 5 63% 11 2 18% 7 2 29% 5 2 40% 3 0 0%
Damaliscus pygargus M86499 35 19 54% 47 25 53% 28 10 36% 12 8 67% 7 6 86% 9 4 44% 7 0 0% 8 2 25% 9 0 0% 2 0 0%
Daphnia pulex Z15015 31 3 10% 34 5 15% 21 2 10% 14 0 0% 6 0 0% 7 3 43% 5 1 20% 8 5 63% 5 0 0% 8 0 0%
Dictyostelium discoideum D16466 49 23 47% 66 27 41% 48 27 56% 27 11 41% 20 6 30% 6 2 33% 14 4 29% 11 4 36% 4 0 0% 8 5 63%
Didelphis virginiana Z29573 40 15 38% 42 26 62% 28 16 57% 14 7 50% 10 6 60% 6 1 17% 11 0 0% 5 0 0% 9 0 0% 0 0 0%
Drosophila teissieri X54011 32 10 31% 44 16 36% 28 14 50% 9 0 0% 4 0 0% 3 0 0% 9 0 0% 5 0 0% 6 0 0% 0 0 0%
Drosophila virilis X05914 37 8 22% 47 16 34% 28 8 29% 14 5 36% 4 0 0% 8 0 0% 9 0 0% 8 0 0% 6 0 0% 0 0 0%
Drosophila yakuba X03240 32 10 31% 44 16 36% 28 14 50% 9 0 0% 4 0 0% 4 0 0% 8 0 0% 5 0 0% 6 0 0% 0 0 0%
Eleutherodactylus coqui NPA 31 11 35% 26 14 54% 28 11 39% 7 3 43% 9 3 33% 3 1 33% 11 4 36% 7 0 0% 3 1 33% 7 4 57%
Equus caballus X79547 35 13 37% 46 29 63% 26 8 31% 13 8 62% 7 4 57% 10 5 50% 8 0 0% 6 0 0% 10 0 0% 2 0 0%
Farfantepenaeus notialis X84357 29 7 24% 39 25 64% 28 9 32% 11 0 0% 6 0 0% 7 0 0% 14 0 0% 6 0 0% 4 0 0% 3 0 0%
Felis catus U20753 37 15 41% 41 15 37% 27 9 33% 13 3 23% 8 3 38% 9 4 44% 10 0 0% 6 0 0% 8 0 0% 1 0 0%
Gallus gallus X52392 37 14 38% 37 17 46% 32 15 47% 13 2 15% 6 2 33% 8 8 100% 11 9 82% 5 2 40% 7 0 0% 2 0 0%
Glycine max M16859 59 28 47% 66 26 39% 48 9 19% 30 0 0% 28 6 21% 18 3 17% 14 5 36% 10 2 20% 10 3 30% 11 0 0%
Harpactes ardens U94810 27 10 37% 40 18 45% 29 15 52% 15 2 13% 7 3 43% 5 0 0% 11 5 45% 6 1 17% 6 0 0% 2 0 0%
Harpochytrium sp. JEL94 AY182005 43 21 49% 74 35 47% 47 17 36% 16 8 50% 12 5 42% 7 7 100% 9 3 33% 7 4 57% 6 2 33% 8 3 38%
Herpetomonas megaseliae U01006 2 0 0% 2 0 0% 8 5 63% 6 0 0% 4 0 0% 2 0 0% 1 0 0% 0 0 0% 0 0 0% 0 0 0%
Homo sapiens J01415 43 24 56% 43 27 63% 26 3 12% 12 7 58% 6 5 83% 10 5 50% 7 0 0% 6 0 0% 9 0 0% 2 0 0%
Katharina tunicata U09810 28 10 36% 32 10 31% 24 8 33% 11 2 18% 8 3 38% 5 0 0% 4 0 0% 4 0 0% 6 3 50% 5 1 20%
Latimeria chalumnae Z21921 35 18 51% 36 21 58% 28 11 39% 11 0 0% 5 0 0% 8 0 0% 10 0 0% 6 0 0% 6 0 0% 4 0 0%
Leishmania tarentolae M10126 10 3 30% 10 5 50% 12 1 8% 8 0 0% 4 0 0% 2 0 0% 1 0 0% 0 0 0% 0 0 0% 0 0 0%
Locusta migratoria X80245 26 3 12% 36 5 14% 20 2 10% 14 0 0% 10 0 0% 5 0 0% 3 0 0% 8 4 50% 6 0 0% 5 0 0%
Loxodonta africana U60182 D50847 40 13 33% 40 14 35% 29 11 38% 12 3 25% 8 4 50% 10 6 60% 8 5 63% 6 0 0% 9 0 0% 1 0 0%
Lumbricus terrestris U24570 32 12 38% 31 18 58% 19 6 32% 8 0 0% 3 0 0% 7 0 0% 6 0 0% 4 0 0% 9 0 0% 1 0 0%
Lutreolina crassicaudata U33494 42 12 29% 46 21 46% 30 10 33% 11 7 64% 10 9 90% 6 1 17% 11 0 0% 5 0 0% 9 0 0% 0 0 0%
Macropus giganteus X86941 41 18 44% 41 19 46% 27 14 52% 12 4 33% 10 8 80% 6 1 17% 10 5 50% 5 0 0% 8 0 0% 2 0 0%
Magicicada tredecim NPA 30 6 20% 35 7 20% 22 2 9% 11 0 0% 8 0 0% 8 0 0% 3 0 0% 6 0 0% 1 0 0% 7 0 0%
Marchantia polymorpha M68292 54 29 54% 62 43 69% 42 17 40% 32 19 59% 25 12 48% 13 11 85% 15 10 67% 8 6 75% 6 2 33% 3 0 0%
Metridium senile S75445 42 19 45% 60 22 37% 46 18 39% 21 10 48% 15 7 47% 7 0 0% 10 0 0% 7 0 0% 4 0 0% 2 0 0%
Monosiga brevicollis AF538053 46 22 48% 62 33 53% 53 28 53% 40 22 55% 25 4 16% 14 3 21% 15 2 13% 8 0 0% 14 0 0% 8 0 0%
Mus musculus J01420 40 16 40% 38 21 55% 28 4 14% 11 5 45% 8 2 25% 9 6 67% 9 8 89% 6 2 33% 9 0 0% 1 0 0%
Muscardinus avellanarius X84384 38 19 50% 42 23 55% 26 14 54% 15 10 67% 9 4 44% 7 4 57% 10 0 0% 7 0 0% 6 1 17% 3 2 67%
Mytilus edulis M83756 29 13 45% 35 21 60% 25 3 12% 14 0 0% 11 0 0% 2 0 0% 5 0 0% 0 0 0% 3 0 0% 5 0 0%
Nephroselmis olivacea AF110138 64 41 64% 79 46 58% 57 30 53% 35 5 14% 25 8 32% 14 3 21% 13 4 31% 12 4 33% 14 9 64% 8 5 63%
Neurospora crassa L33367 40 17 43% 56 23 41% 40 23 58% 20 7 35% 17 9 53% 8 6 75% 5 1 20% 6 0 0% 13 8 62% 9 3 33%
Ochromonas danica AF287134 71 20 28% 84 26 31% 50 16 32% 36 12 33% 29 9 31% 18 7 39% 16 10 63% 7 3 43% 16 5 31% 13 5 38%
Oenothera berteriana X61277 59 28 47% 65 27 42% 49 26 53% 30 13 43% 27 5 19% 18 0 0% 13 0 0% 10 0 0% 10 0 0% 10 0 0%
Oncorhynchus mykiss L29771 39 24 62% 43 19 44% 32 14 44% 9 3 33% 9 4 44% 8 2 25% 9 0 0% 6 0 0% 6 0 0% 1 0 0%
Ornithorhynchus anatinus U33498 X83427 43 17 40% 40 20 50% 27 9 33% 9 3 33% 8 3 38% 8 0 0% 8 0 0% 5 0 0% 8 0 0% 2 0 0%
Pan troglodytes D38113 41 21 51% 45 17 38% 25 7 28% 11 2 18% 7 4 57% 10 5 50% 8 0 0% 7 0 0% 10 3 30% 1 1 100%
Paracentrotus lividus J04815 32 13 41% 37 22 59% 26 10 38% 13 0 0% 13 4 31% 7 3 43% 2 0 0% 8 0 0% 3 2 67% 7 4 57%
Paramecium tetraurelia K01751 48 5 10% 68 18 26% 40 9 23% 28 14 50% 21 1 5% 9 0 0% 6 0 0% 2 0 0% 5 0 0% 2 0 0%
Pedinomonas minor AF116775 56 20 36% 69 27 39% 37 15 41% 26 7 27% 16 1 6% 5 1 20% 13 5 38% 10 3 30% 13 0 0% 6 0 0%
Penicillium chrysogenum Z23072 49 29 59% 70 42 60% 41 23 56% 27 11 41% 25 17 68% 9 2 22% 7 0 0% 6 4 67% 9 1 11% 6 0 0%
Petromyzon marinus U11880 35 10 29% 40 16 40% 28 13 46% 8 2 25% 4 0 0% 4 2 50% 8 2 25% 4 0 0% 5 0 0% 1 0 0%
Phalanger orientalis U33496 39 9 23% 40 16 40% 30 9 30% 9 4 44% 11 8 73% 6 2 33% 11 5 45% 5 0 0% 8 0 0% 1 0 0%
Phascogale tapoatafa U33497 47 22 47% 46 23 50% 30 16 53% 11 3 27% 10 3 30% 6 0 0% 11 0 0% 5 0 0% 7 0 0% 3 0 0%
Phoca vitulina X63726 36 11 31% 42 10 24% 24 6 25% 15 2 13% 8 4 50% 7 2 29% 10 0 0% 5 2 40% 10 0 0% 1 0 0%
Physarum polycephalum X75592 59 25 42% 63 21 33% 42 6 14% 34 15 44% 26 2 8% 21 0 0% 13 0 0% 11 0 0% 7 0 0% 9 0 0%
Phytophthora infestans U17009 71 37 52% 72 43 60% 56 24 43% 34 20 59% 25 16 64% 15 13 87% 15 5 33% 11 3 27% 12 2 17% 11 5 45%
Pichia canadensis D49702 D31785 41 12 29% 55 26 47% 30 14 47% 22 5 23% 20 1 5% 11 7 64% 12 9 75% 14 6 43% 10 9 90% 6 6 100%
Podospora anserina X14734 53 21 40% 60 23 38% 40 15 38% 16 1 6% 15 8 53% 13 6 46% 10 2 20% 6 0 0% 9 0 0% 10 0 0%
Porphyra purpurea AF114794 59 26 44% 76 40 53% 47 16 34% 36 15 42% 23 10 43% 19 4 21% 12 7 58% 6 2 33% 7 5 71% 4 3 75%
Protopterus dolloi L42813 40 17 43% 43 16 37% 29 13 45% 10 6 60% 10 6 60% 9 1 11% 5 0 0% 6 0 0% 9 0 0% 2 0 0%
Prototheca wickerhamii X15435 70 48 69% 75 53 71% 65 37 57% 33 20 61% 28 18 64% 13 11 85% 8 5 63% 7 0 0% 9 5 56% 11 8 73%
Puma concolor U33495 36 13 36% 41 17 41% 27 7 26% 13 5 38% 8 3 38% 9 4 44% 10 0 0% 6 2 33% 8 0 0% 1 0 0%
Pylaiella littoralis X14874 53 28 53% 65 28 43% 39 6 15% 31 10 32% 19 7 37% 11 1 9% 15 0 0% 8 0 0% 11 0 0% 9 0 0%
Rana catesbeiana X12841 41 24 59% 40 28 70% 28 16 57% 11 1 9% 9 5 56% 7 2 29% 8 0 0% 6 0 0% 7 0 0% 2 0 0%
Rattus norvegicus J01438 39 11 28% 37 8 22% 27 8 30% 11 0 0% 10 1 10% 9 6 67% 9 7 78% 7 0 0% 6 0 0% 2 0 0%
Reclinomonas americana AF007261 70 52 74% 88 68 77% 60 37 62% 40 30 75% 26 16 62% 18 17 94% 16 13 81% 9 9 100% 6 6 100% 12 8 67%
Rhizopus stolonifer NPA 59 46 78% 76 44 58% 51 41 80% 29 16 55% 28 17 61% 15 13 87% 9 3 33% 4 0 0% 4 1 25% 5 5 100%
Rhodomonas salina AF288090 68 32 47% 68 34 50% 46 18 39% 35 12 34% 22 10 45% 17 2 12% 16 10 63% 11 7 64% 9 0 0% 9 2 22%
Saccharomyces cerevisiae V00704 61 33 54% 75 49 65% 44 20 45% 21 6 29% 14 3 21% 7 4 57% 11 4 36% 12 7 58% 16 8 50% 10 5 50%
Salmo salar U12143 41 24 59% 42 17 40% 30 14 47% 10 3 30% 7 0 0% 10 1 10% 6 1 17% 8 2 25% 6 2 33% 1 0 0%
Sceloporus undulatus L28075 26 14 54% 39 24 62% 29 18 62% 13 2 15% 12 8 67% 10 9 90% 6 3 50% 8 2 25% 7 2 29% 2 0 0%
Schizosaccharomyces pombe X15738 66 36 55% 83 40 48% 42 19 45% 24 6 25% 27 8 30% 10 3 30% 15 5 33% 8 2 25% 10 0 0% 6 0 0%
Scyliorhinus canicula Y16067 38 16 42% 42 19 45% 28 10 36% 11 6 55% 9 9 100% 8 1 13% 9 0 0% 5 0 0% 7 0 0% 7 0 0%
Secale cereale Z14059 60 22 37% 66 22 33% 48 10 21% 30 11 37% 27 6 22% 18 0 0% 13 0 0% 6 0 0% 6 0 0% 3 0 0%
Sphenodon punctatus L28076 29 10 34% 48 23 48% 29 12 41% 9 1 11% 11 10 91% 4 1 25% 3 0 0% 7 0 0% 6 0 0% 0 0 0%
Spizellomyces punctatus AF404303 51 28 55% 48 29 60% 45 22 49% 24 10 42% 16 10 63% 9 0 0% 14 0 0% 12 0 0% 12 0 0% 12 0 0%
Stenella coeruleoalba X78169 40 20 50% 40 17 43% 28 8 29% 11 0 0% 8 3 38% 8 4 50% 10 2 20% 7 0 0% 8 0 0% 2 0 0%
Suillus sinuspaulianus L47584 64 30 47% 85 30 35% 52 21 40% 33 13 39% 25 8 32% 21 11 52% 24 12 50% 13 7 54% 11 2 18% 14 6 43%
Tetrahymena pyriformis M12714 49 28 57% 59 33 56% 42 14 33% 38 14 37% 24 12 50% 9 3 33% 5 2 40% 6 3 50% 5 5 100% 4 4 100%
Trachemys scripta L28077 34 19 56% 39 20 51% 25 14 56% 7 0 0% 6 3 50% 7 6 86% 12 7 58% 5 0 0% 7 0 0% 1 0 0%
Triticum aestivum Z14078 60 37 62% 66 29 44% 48 22 46% 30 8 27% 27 6 22% 18 8 44% 13 6 46% 6 2 33% 6 4 67% 7 2 29%
Trypanosoma brucei X02547 9 0 0% 13 0 0% 12 0 0% 9 0 0% 4 0 0% 2 0 0% 1 0 0% 0 0 0% 0 0 0% 0 0 0%
Williopsis saturnus var. mrakii X71392 41 14 34% 59 26 44% 29 14 48% 17 3 18% 16 7 44% 15 9 60% 17 7 41% 15 4 27% 14 8 57% 6 2 33%
Xenopus laevis M27605 37 23 62% 43 21 49% 31 15 48% 10 6 60% 8 5 63% 8 4 50% 9 4 44% 5 0 0% 7 0 0% 3 3 100%
Zea mays X00794 60 35 58% 70 36 51% 51 26 51% 35 15 43% 23 2 9% 16 6 38% 18 11 61% 6 2 33% 6 4 67% 7 2 29%
Eukaryotic Nuclear   2-10 11-20 21-30 31-40 41-50 51-60 61-70 71-80 81-90 91-100
C1 P A C P A C P A C P A C P A C P A C P A C P A C P A C P A
Acanthamoeba castellanii U07413 63 29 46% 94 43 46% 57 25 44% 42 13 31% 26 10 38% 12 4 33% 14 0 0% 9 0 0% 9 0 0% 16 0 0%
Agmasoma penaei NPA 46 21 46% 62 35 56% 43 21 49% 28 18 64% 14 12 86% 6 0 0% 9 4 44% 3 2 67% 2 0 0% 8 5 63%
Ahnfeltia plicata Z14139 71 33 46% 96 46 48% 58 26 45% 45 15 33% 27 8 30% 9 7 78% 9 3 33% 7 5 71% 11 6 55% 5 2 40%
Alexandrium fundyense U09048 61 25 41% 84 32 38% 45 12 27% 32 7 22% 23 2 9% 14 5 36% 8 0 0% 7 0 0% 10 0 0% 7 0 0%
Amblyospora sp. U68474 60 26 43% 75 28 37% 47 16 34% 34 15 44% 18 7 39% 13 5 38% 12 0 0% 6 0 0% 7 0 0% 5 0 0%
Ameson michaelis L15741 61 13 21% 67 21 31% 34 6 18% 31 4 13% 15 0 0% 5 0 0% 12 3 25% 7 3 43% 8 0 0% 11 0 0%
Androctonus australis X77908 68 33 49% 89 49 55% 58 31 53% 39 12 31% 22 4 18% 14 4 29% 9 6 67% 8 5 63% 11 7 64% 6 2 33%
Antonospora scoticae AF024655 65 28 43% 75 27 36% 34 6 18% 32 7 22% 20 4 20% 8 1 13% 11 4 36% 5 0 0% 9 0 0% 6 0 0%
Artemia salina X01723 64 20 31% 92 45 49% 62 22 35% 38 10 26% 25 6 24% 11 7 64% 8 3 38% 7 4 57% 10 1 10% 6 0 0%
Audouinella dasyae L26181 71 45 63% 97 52 54% 60 37 62% 44 9 20% 28 6 21% 9 7 78% 9 3 33% 6 4 67% 12 3 25% 5 2 40%
Audouinella hermannii AF026040 71 47 66% 97 63 65% 59 29 49% 44 13 30% 29 12 41% 9 5 56% 9 3 33% 6 4 67% 12 3 25% 6 3 50%
Aulacoseira ambigua X85404 68 24 35% 92 29 32% 56 11 20% 36 9 25% 27 8 30% 19 6 32% 12 1 8% 10 0 0% 13 4 31% 8 0 0%
Babesia bigemina X59604 66 30 45% 75 30 40% 47 21 45% 41 12 29% 20 3 15% 11 7 64% 9 6 67% 9 6 67% 10 4 40% 7 4 57%
Bacillidium sp. AF104087 58 18 31% 70 15 21% 35 15 43% 27 19 70% 26 17 65% 11 5 45% 10 8 80% 10 6 60% 7 1 14% 7 3 43%
Balamuthia mandrillaris AF019071 66 35 53% 93 44 47% 45 15 33% 39 10 26% 19 4 21% 20 10 50% 14 9 64% 6 3 50% 12 6 50% 12 6 50%
Balbiania investiens AF132294 64 36 56% 89 52 58% 56 28 50% 46 15 33% 27 8 30% 11 10 91% 9 6 67% 6 5 83% 12 3 25% 6 3 50%
Bangia sp. (Northwest Territories/NWT) AF043355 65 33 51% 98 41 42% 53 24 45% 44 13 30% 28 3 11% 15 3 20% 13 3 23% 6 3 50% 13 8 62% 6 2 33%
Bangiopsis subsimplex AF168627 67 37 55% 93 53 57% 56 30 54% 46 20 43% 29 14 48% 12 9 75% 9 3 33% 6 4 67% 12 3 25% 5 2 40%
Batrachospermum gelatinosum AF026045 69 45 65% 95 58 61% 62 34 55% 42 14 33% 29 13 45% 8 6 75% 9 3 33% 7 5 71% 11 6 55% 7 4 57%
Batrachospermum macrosporum AF026048 70 37 53% 96 46 48% 59 26 44% 40 11 28% 30 10 33% 8 0 0% 9 0 0% 7 0 0% 11 0 0% 7 0 0%
Bonnemaisonia hamifera L26182 70 40 57% 94 44 47% 54 28 52% 47 19 40% 28 14 50% 11 6 55% 9 3 33% 7 5 71% 10 2 20% 7 3 43%
Bostrychia moritziana AF203893 66 36 55% 100 47 47% 55 20 36% 48 11 23% 25 5 20% 15 7 47% 8 3 38% 6 3 50% 7 4 57% 11 2 18%
Candida albicans M60302 70 41 59% 97 53 55% 60 34 57% 43 18 42% 28 13 46% 12 11 92% 9 7 78% 9 7 78% 11 5 45% 6 3 50%
Ceramium rubrum L26183 75 38 51% 94 48 51% 54 20 37% 46 11 24% 28 14 50% 11 6 55% 9 3 33% 7 5 71% 11 2 18% 7 4 57%
Chlorella luteoviridis X73998 66 34 52% 93 55 59% 58 32 55% 42 15 36% 32 17 53% 12 4 33% 9 0 0% 7 1 14% 11 3 27% 6 0 0%
Chondrus crispus Z14140 75 45 60% 93 54 58% 55 30 55% 47 16 34% 28 19 68% 11 6 55% 9 3 33% 7 5 71% 10 5 50% 7 4 57%
Compsopogon coeruleus AF087124 66 34 52% 93 46 49% 53 21 40% 40 6 15% 25 3 12% 14 9 64% 10 4 40% 7 4 57% 11 3 27% 5 2 40%
Corallina officinalis L26184 72 35 49% 100 58 58% 55 17 31% 48 10 21% 29 11 38% 12 5 42% 9 0 0% 7 0 0% 10 0 0% 7 0 0%
Crossodonthina koreana Z36893 67 30 45% 91 41 45% 55 26 47% 42 14 33% 24 4 17% 13 2 15% 8 6 75% 7 5 71% 10 6 60% 5 0 0%
Cryptocercus punctulatus NPA 64 31 48% 92 47 51% 57 19 33% 42 7 17% 22 9 41% 19 7 37% 12 2 17% 7 4 57% 9 5 56% 9 2 22%
Cryptococcus neoformans var. neoformans L05428 69 42 61% 95 56 59% 57 35 61% 46 20 43% 31 15 48% 14 13 93% 10 7 70% 9 7 78% 11 5 45% 6 3 50%
Culicosporella lunata AF027683 67 32 48% 83 41 49% 40 23 58% 31 17 55% 25 8 32% 12 6 50% 16 15 94% 2 1 50% 5 3 60% 3 0 0%
Cyanophora paradoxa X68483 70 40 57% 97 53 55% 61 32 52% 42 19 45% 29 10 34% 15 4 27% 9 3 33% 6 1 17% 12 2 17% 5 0 0%
Cymatosira belgica X85387 69 34 49% 92 36 39% 60 31 52% 42 19 45% 30 15 50% 15 8 53% 10 1 10% 8 1 13% 8 4 50% 4 0 0%
Cyrtohymena citrina AF164135 68 41 60% 103 44 43% 51 14 27% 43 14 33% 30 12 40% 12 8 67% 11 8 73% 6 3 50% 10 8 80% 6 3 50%
Dixonielloa grisea L26187 70 37 53% 99 46 46% 52 20 38% 41 9 22% 30 9 30% 13 5 38% 9 2 22% 7 1 14% 10 4 40% 6 0 0%
Drosophila melanogaster M21017 67 32 48% 90 43 48% 61 30 49% 42 16 38% 23 7 30% 17 9 53% 9 6 67% 6 4 67% 8 7 88% 6 1 17%
Echinococcus granulosus U27015 54 21 39% 74 33 45% 48 13 27% 35 7 20% 21 13 62% 7 0 0% 13 5 38% 11 2 18% 12 0 0% 11 0 0%
Edhazardia aedis AF027684 60 30 50% 74 40 54% 38 14 37% 32 6 19% 23 6 26% 10 3 30% 19 5 26% 8 4 50% 10 2 20% 11 0 0%
Encephalitozoon cuniculi X98467 66 16 24% 75 26 35% 43 4 9% 28 4 14% 18 4 22% 10 4 40% 8 1 13% 9 0 0% 7 0 0% 7 0 0%
Encephalitozoon hellem AF118143 65 16 25% 76 21 28% 45 7 16% 28 4 14% 14 2 14% 7 4 57% 8 3 38% 7 2 29% 7 0 0% 11 0 0%
Encephalitozoon sp. L16867 62 16 26% 72 23 32% 41 6 15% 28 4 14% 17 2 12% 6 1 17% 10 4 40% 8 0 0% 10 0 0% 7 0 0%
Endoreticulatus schubergi L39109 56 23 41% 76 35 46% 40 18 45% 29 8 28% 20 2 10% 8 0 0% 10 0 0% 7 1 14% 8 4 50% 7 0 0%
Engelmanniella mobilis AF164134 67 36 54% 103 56 54% 51 23 45% 44 15 34% 29 10 34% 12 11 92% 11 8 73% 7 5 71% 8 4 50% 8 0 0%
Enterocytozoonidae gen. sp. AF201911 54 27 50% 71 36 51% 45 22 49% 21 13 62% 21 6 29% 10 0 0% 9 5 56% 6 1 17% 6 5 83% 7 7 100%
Erythrotrichia carnea L26189 71 40 56% 97 53 55% 62 38 61% 44 18 41% 31 19 61% 12 4 33% 9 0 0% 7 0 0% 11 0 0% 5 0 0%
Euglypha rotunda X77692 68 35 51% 86 49 57% 63 37 59% 42 17 40% 33 19 58% 17 11 65% 9 6 67% 9 8 89% 10 8 80% 6 3 50%
Euplotes aediculatus M14590 69 29 42% 96 36 38% 55 15 27% 38 10 26% 30 7 23% 11 0 0% 10 4 40% 9 7 78% 10 0 0% 3 2 67%
Flabelliforma montana AJ252962 49 20 41% 64 31 48% 29 5 17% 28 10 36% 19 1 5% 2 0 0% 4 0 0% 6 0 0% 6 0 0% 6 0 0%
Fragaria x ananassa X15590 65 19 29% 95 37 39% 61 24 39% 45 13 29% 29 3 10% 9 1 11% 9 6 67% 8 5 63% 11 7 64% 6 2 33%
Gastrostyla steinei AF164133 67 26 39% 103 44 43% 51 20 39% 43 15 35% 30 12 40% 12 8 67% 11 8 73% 6 3 50% 9 5 56% 7 4 57%
Gelidium vagum L26190 72 38 53% 93 45 48% 56 29 52% 46 16 35% 29 17 59% 10 6 60% 9 3 33% 7 5 71% 10 5 50% 7 4 57%
Genicularia spirotaenia X74753 66 35 53% 93 46 49% 55 28 51% 45 12 27% 33 12 36% 13 8 62% 9 6 67% 7 4 57% 12 7 58% 6 2 33%
Giardia ardeae Z17210 63 27 43% 74 34 46% 32 13 41% 22 7 32% 30 9 30% 11 4 36% 5 2 40% 7 5 71% 10 0 0% 7 0 0%
Giardia intestinalis X52949 57 18 32% 78 15 19% 36 4 11% 26 4 15% 29 5 17% 7 0 0% 8 4 50% 5 3 60% 6 0 0% 7 0 0%
Giardia muris X65063 57 27 47% 71 39 55% 33 11 33% 25 9 36% 29 8 28% 10 0 0% 6 0 0% 7 0 0% 9 0 0% 9 0 0%
Glaucocystis nostochinearum X70803 68 33 49% 98 54 55% 57 29 51% 43 13 30% 26 10 38% 18 6 33% 10 3 30% 7 1 14% 12 2 17% 6 0 0%
Gloeochaete wittrockiana X81901 67 33 49% 97 45 46% 59 30 51% 42 21 50% 31 11 35% 14 12 86% 9 4 44% 9 4 44% 11 4 36% 5 2 40%
Glomus intraradices X58725 65 35 54% 88 55 63% 52 31 60% 36 15 42% 28 15 54% 10 7 70% 12 8 67% 10 6 60% 10 2 20% 7 0 0%
Glugea atherinae U15987 59 32 54% 61 32 52% 47 24 51% 32 11 34% 16 14 88% 8 0 0% 7 5 71% 6 4 67% 9 8 89% 7 3 43%
Glugea stephani AF056015 52 29 56% 57 28 49% 44 20 45% 31 15 48% 16 8 50% 8 7 88% 7 6 86% 4 2 50% 4 3 75% 5 3 60%
Gracilariopsis sp. M33639 70 37 53% 95 47 49% 56 21 38% 49 14 29% 26 9 35% 13 11 85% 9 3 33% 6 4 67% 9 3 33% 9 3 33%
Halymenia plana U33133 72 38 53% 95 48 51% 56 27 48% 46 14 30% 28 13 46% 11 7 64% 9 3 33% 6 4 67% 11 3 27% 7 3 43%
Hexamita sp. Z17224 55 22 40% 71 28 39% 40 14 35% 28 13 46% 22 8 36% 10 4 40% 9 5 56% 5 2 40% 13 5 38% 8 0 0%
Hildenbrandia rubra L19345 74 40 54% 95 54 57% 57 30 53% 48 18 38% 27 12 44% 11 3 27% 9 0 0% 7 0 0% 11 0 0% 6 0 0%
Homo sapiens K03432 70 28 40% 101 42 42% 60 32 53% 47 13 28% 28 8 29% 17 5 29% 11 3 27% 12 4 33% 11 5 45% 7 1 14%
Ichthyosporidium sp. L39110 55 20 36% 65 23 35% 42 17 40% 29 10 34% 20 11 55% 2 0 0% 8 0 0% 6 2 33% 10 5 50% 7 0 0%
Janacekia debaisieuxi AJ252950 62 27 44% 74 24 32% 39 15 38% 30 19 63% 21 10 48% 9 3 33% 11 7 64% 5 4 80% 7 1 14% 6 3 50%
Lecanora dispersa NPA 57 19 33% 87 24 28% 48 10 21% 38 10 26% 27 5 19% 10 9 90% 7 4 57% 5 2 40% 6 2 33% 3 0 0%
Lilioceris lilii NPA 67 39 58% 87 53 61% 59 35 59% 47 21 45% 22 13 59% 19 16 84% 14 8 57% 7 5 71% 8 8 100% 9 4 44%
Loma acerinae AJ252951 61 33 54% 65 28 43% 47 20 43% 32 12 38% 15 6 40% 8 3 38% 7 6 86% 8 2 25% 8 4 50% 7 3 43%
Mastigamoeba balamuthi L23799 67 43 64% 91 49 54% 55 28 51% 48 20 42% 28 16 57% 13 11 85% 19 8 42% 12 8 67% 9 3 33% 8 5 63%
Microgemma sp. AJ252952 63 36 57% 61 36 59% 47 26 55% 28 14 50% 19 9 47% 8 0 0% 7 0 0% 5 1 20% 7 4 57% 5 0 0%
Microsporidium 57864 U90885 66 17 26% 70 21 30% 42 15 36% 30 13 43% 20 11 55% 8 0 0% 13 5 38% 6 2 33% 4 0 0% 9 5 56%
Mus musculus X00686 67 27 40% 98 43 44% 55 31 56% 47 14 30% 28 12 43% 17 9 53% 10 3 30% 11 4 36% 12 5 42% 7 2 29%
Mytilus edulis L24489 64 33 52% 95 48 51% 53 29 55% 44 15 34% 27 10 37% 17 9 53% 10 7 70% 8 5 63% 10 6 60% 6 2 33%
Naegleria gruberi Thesis, Mullican J. 64 22 34% 76 23 30% 46 11 24% 33 8 24% 21 9 43% 6 5 83% 12 3 25% 11 4 36% 9 3 33% 12 5 42%
Nemalion helminthoides L26196 73 48 66% 95 61 64% 57 26 46% 45 16 36% 29 12 41% 10 7 70% 9 3 33% 6 4 67% 12 3 25% 6 3 50%
Nemalionopsis shawii AF506272 70 47 67% 96 59 61% 53 27 51% 42 17 40% 26 17 65% 11 8 73% 14 3 21% 8 4 50% 8 3 38% 6 3 50%
Nosema algerae AF069063 68 30 44% 83 44 53% 46 12 26% 33 5 15% 23 6 26% 12 3 25% 12 5 42% 7 0 0% 8 0 0% 5 0 0%
Nosema apis U97150 63 19 30% 68 30 44% 42 14 33% 28 18 64% 19 8 42% 9 2 22% 13 10 77% 5 2 40% 4 0 0% 8 1 13%
Nosema necatrix U11051 55 12 22% 59 14 24% 38 12 32% 28 13 46% 21 6 29% 7 0 0% 12 9 75% 9 5 56% 4 0 0% 7 0 0%
Okanagana utahensis U06478 70 35 50% 97 55 57% 59 29 49% 42 11 26% 21 8 38% 22 10 45% 18 10 56% 7 6 86% 9 8 89% 8 2 25%
Onychodromus quadricornutus X53485 67 20 30% 102 34 33% 51 13 25% 43 10 23% 30 8 27% 12 8 67% 11 8 73% 6 3 50% 9 5 56% 7 4 57%
Ophiopholis aculeata L28056 55 19 35% 84 34 40% 53 21 40% 37 8 22% 21 4 19% 14 5 36% 11 1 9% 7 0 0% 9 0 0% 4 0 0%
Oxytricha granulifera AF164122 65 38 58% 102 51 50% 52 18 35% 43 13 30% 29 10 34% 12 11 92% 11 8 73% 7 4 57% 8 4 50% 8 5 63%
Oxytricha longa AF164125 67 37 55% 103 54 52% 51 21 41% 43 15 35% 30 11 37% 12 11 92% 11 8 73% 6 3 50% 9 7 78% 7 4 57%
Palmaria palmata Z14142 71 46 65% 96 53 55% 59 40 68% 45 16 36% 29 10 34% 9 5 56% 9 3 33% 6 4 67% 11 3 27% 6 3 50%
Paraurostyla weissei AF164127 67 31 46% 103 45 44% 51 22 43% 43 15 35% 30 11 37% 12 8 67% 11 8 73% 6 3 50% 9 7 78% 7 4 57%
Paruroleptus lepisma AF164132 66 32 48% 102 40 39% 51 13 25% 44 10 23% 29 7 24% 12 8 67% 11 3 27% 7 1 14% 8 2 25% 8 0 0%
Paulinella chromatophora X81811 66 29 44% 93 45 48% 61 27 44% 42 16 38% 32 17 53% 15 8 53% 11 9 82% 8 6 75% 10 8 80% 6 3 50%
Placopecten magellanicus X53899 63 32 51% 94 38 40% 53 23 43% 43 15 35% 28 6 21% 14 5 36% 9 3 33% 10 2 20% 8 2 25% 7 0 0%
Plasmodium falciparum (A gene) M19172 74 50 68% 90 58 64% 60 27 45% 46 17 37% 26 10 38% 9 9 100% 14 13 93% 10 8 80% 15 8 53% 15 9 60%
Plasmodium falciparum (S gene) M19173 64 30 47% 88 38 43% 54 14 26% 51 11 22% 20 4 20% 10 4 40% 15 6 40% 13 6 46% 17 12 71% 12 4 33%
Plasmodium vivax (A gene) U07367 70 43 61% 91 48 53% 59 26 44% 35 9 26% 21 10 48% 10 10 100% 16 10 63% 14 11 79% 15 13 87% 15 9 60%
Plasmodium vivax (O gene) U93095 59 23 39% 88 24 27% 59 18 31% 35 9 26% 27 12 44% 11 5 45% 12 8 67% 14 11 79% 13 11 85% 13 8 62%
Plasmodium vivax (S gene) U07368 67 37 55% 90 53 59% 65 30 46% 33 5 15% 26 8 31% 11 7 64% 15 4 27% 14 5 36% 16 7 44% 12 6 50%
Pleistophora hippoglossoideos AJ252953 60 30 50% 68 29 43% 49 14 29% 29 7 24% 20 8 40% 10 0 0% 8 5 63% 5 2 40% 10 4 40% 5 3 60%
Pleistophora sp. U10342 51 25 49% 70 33 47% 37 17 46% 30 12 40% 18 4 22% 8 4 50% 10 1 10% 7 1 14% 5 2 40% 8 3 38%
Pleurotricha lanceolota AF164128 66 32 48% 103 48 47% 51 18 35% 43 15 35% 30 11 37% 12 5 42% 11 3 27% 6 3 50% 9 2 22% 7 0 0%
Plocamiocolax pulvinata U09618 75 39 52% 96 44 46% 58 24 41% 47 12 26% 28 16 57% 10 8 80% 9 3 33% 7 5 71% 11 2 18% 6 3 50%
Polydispyrenia simulii AJ252960 54 20 37% 77 39 51% 35 11 31% 28 10 36% 19 4 21% 2 0 0% 5 0 0% 6 0 0% 6 0 0% 6 0 0%
Porphyra miniata AF175540 61 22 36% 96 35 36% 54 14 26% 45 7 16% 26 3 12% 18 3 17% 13 3 23% 6 3 50% 13 5 38% 6 0 0%
Porphyridium aerugineum L27635 70 38 54% 96 45 47% 55 16 29% 42 15 36% 33 15 45% 9 7 78% 9 6 67% 8 7 88% 9 3 33% 7 4 57%
Reticulitermes flavipes NPA 65 32 49% 100 57 57% 60 32 53% 46 14 30% 20 8 40% 23 13 57% 10 3 30% 7 4 57% 9 5 56% 7 1 14%
Rhodella maculata U21217 63 24 38% 94 50 53% 57 23 40% 47 15 32% 27 9 33% 11 7 64% 9 5 56% 7 6 86% 12 9 75% 5 2 40%
Rhodochaete parvula AF139462 69 38 55% 92 45 49% 60 33 55% 45 20 44% 31 16 52% 11 11 100% 9 3 33% 7 4 57% 11 3 27% 5 2 40%
Rhodogorgon carriebowensis AF006089 70 46 66% 100 57 57% 56 25 45% 45 10 22% 26 10 38% 16 7 44% 14 3 21% 11 9 82% 13 7 54% 9 3 33%
Rhodymenia leptophylla U09621 73 32 44% 95 45 47% 57 33 58% 46 15 33% 28 13 46% 11 7 64% 9 3 33% 6 4 67% 11 3 27% 7 3 43%
Saccharomyces cerevisiae U53879 69 35 51% 98 56 57% 58 27 47% 47 25 53% 29 17 59% 11 8 73% 9 6 67% 9 7 78% 11 5 45% 6 0 0%
Spraguea lophii AF033197 60 24 40% 63 26 41% 46 11 24% 27 12 44% 21 2 10% 7 0 0% 6 4 67% 4 2 50% 7 5 71% 7 7 100%
Staurastrum sp. M752 X74752 68 34 50% 92 37 40% 52 20 38% 45 12 27% 32 11 34% 12 0 0% 9 5 56% 6 4 67% 13 11 85% 5 1 20%
Strongylocentrotus purpuratus L28055 56 30 54% 85 43 51% 54 22 41% 38 11 29% 17 3 18% 13 4 31% 12 3 25% 9 5 56% 6 3 50% 6 0 0%
Stylonychia lemnae AF164124 67 36 54% 104 43 41% 51 14 27% 43 14 33% 30 11 37% 12 8 67% 11 8 73% 6 3 50% 9 7 78% 7 4 57%
Stylonychia mytilus AF164123 67 27 40% 103 41 40% 51 16 31% 43 10 23% 30 8 27% 12 8 67% 11 8 73% 6 4 67% 9 2 22% 7 0 0%
Thalassiosira eccentrica X85396 68 32 47% 91 45 49% 62 28 45% 41 15 37% 29 8 28% 15 8 53% 10 4 40% 7 5 71% 12 4 33% 7 4 57%
Thelohania solenopsae AF031538 64 14 22% 77 21 27% 48 15 31% 32 8 25% 21 7 33% 11 3 27% 10 10 100% 9 4 44% 9 4 44% 6 0 0%
Thelohania sp. AF031537 54 12 22% 50 14 28% 32 8 25% 25 8 32% 19 5 26% 6 0 0% 5 0 0% 7 0 0% 5 0 0% 4 0 0%
Thorea hispida AF506273 70 40 57% 93 55 59% 55 31 56% 38 15 39% 26 12 46% 16 13 81% 14 8 57% 7 4 57% 8 3 38% 7 4 57%
Thorea violacea AF026042 76 41 54% 108 62 57% 59 31 53% 40 13 33% 26 13 50% 15 6 40% 15 5 33% 10 0 0% 8 0 0% 10 1 10%
Thorea violacea AF506274 70 43 61% 92 58 63% 55 32 58% 39 16 41% 26 12 46% 15 12 80% 14 8 57% 8 5 63% 8 3 38% 6 3 50%
Toxoplasma gondii (P) X75453 67 33 49% 89 53 60% 51 21 41% 33 9 27% 23 9 39% 13 8 62% 10 7 70% 7 5 71% 10 4 40% 7 4 57%
Trachipleistophora hominis AJ002605 61 30 49% 69 31 45% 49 24 49% 29 14 48% 20 8 40% 5 3 60% 7 6 86% 7 4 57% 7 5 71% 5 3 60%
Tritrichomonas foetus M81842 70 33 47% 82 43 52% 50 21 42% 33 19 58% 20 11 55% 13 8 62% 7 7 100% 10 7 70% 7 0 0% 5 0 0%
Uroleptus gallina AF164130 66 41 62% 102 53 52% 51 22 43% 44 15 34% 30 11 37% 12 8 67% 11 8 73% 7 4 57% 8 6 75% 8 5 63%
Uroleptus pisces AF164131 68 34 50% 101 44 44% 51 17 33% 44 14 32% 29 10 34% 12 11 92% 11 8 73% 7 2 29% 8 4 50% 8 5 63%
Urostyla grandis AF164129 67 29 43% 101 38 38% 51 14 27% 41 14 34% 30 11 37% 12 8 67% 11 8 73% 7 1 14% 9 6 67% 6 3 50%
Vairimorpha necatrix Y00266 M24612 65 12 18% 67 14 21% 39 12 31% 23 11 48% 21 6 29% 7 0 0% 13 10 77% 7 4 57% 4 0 0% 6 0 0%
Vairimorpha sp. Argentina AF031539 47 25 53% 62 25 40% 36 11 31% 28 6 21% 26 5 19% 9 6 67% 12 7 58% 2 0 0% 3 0 0% 3 0 0%
Vavraia culicis AJ252961 60 26 43% 66 25 38% 48 20 42% 29 10 34% 20 5 25% 8 0 0% 7 5 71% 6 1 17% 9 0 0% 5 3 60%
Visvesvaria acridophagus AF024658 67 34 51% 81 50 62% 50 18 36% 36 14 39% 22 10 45% 11 8 73% 10 9 90% 9 4 44% 8 3 38% 8 5 63%
Weiseria palustris AF132544 62 30 48% 78 38 49% 42 15 36% 34 15 44% 22 7 32% 11 5 45% 6 2 33% 9 0 0% 5 0 0% 6 0 0%
Xenopus laevis X04025 67 27 40% 95 46 48% 52 19 37% 47 16 34% 20 9 45% 18 9 50% 10 7 70% 7 5 71% 10 7 70% 6 2 33%
  1. C, Number of comparative, canonical base-pairs (G-C,C-G,A-U,U-A,G-U,U-G); P, Number of base-pairs predicted in the MFold 3.1 optimal structure prediction that match comparative, canonical base-pairs; A, Accuracy of base-pair predictions in the MFold 3.1 optimal structure prediction, accuracy is calculated by dividing the number of correctly predicted Mfold base pairs by the number of canoncial, comparative base pairs within the RNA Contact Distance category.
  2. NPA, Not Publically Available - The sequence used for analysis has not been deposited in Genbank.