Archaea   2-10 11-20 21-30 31-40 41-50 51-60 61-70 71-80 81-90 91-100
C1 P A C P A C P A C P A C P A C P A C P A C P A C P A C P A
Aeropyrum pernix AP000062 70 54 77% 99 72 73% 57 34 60% 42 32 76% 24 15 63% 15 11 73% 13 11 85% 7 7 100% 6 4 67% 5 0 0%
Archaeoglobus fulgidus X05567 AE000965 73 47 64% 99 68 69% 50 34 68% 40 19 48% 27 20 74% 16 16 100% 12 12 100% 5 3 60% 12 3 25% 7 0 0%
Haloarcula marismortui rrnA X61688 70 47 67% 95 61 64% 51 26 51% 40 27 68% 27 21 78% 14 9 64% 12 11 92% 5 3 60% 11 9 82% 6 6 100%
Haloarcula marismortui rrnB X61689 70 53 76% 96 75 78% 51 37 73% 40 36 90% 27 25 93% 15 10 67% 12 11 92% 5 3 60% 11 6 55% 6 3 50%
Halobacterium sp. AE005128 72 42 58% 96 52 54% 50 25 50% 40 31 78% 25 21 84% 16 11 69% 12 11 92% 5 3 60% 11 6 55% 6 3 50%
Haloferax volcanii K00421 71 64 90% 96 77 80% 51 35 69% 40 38 95% 27 26 96% 15 15 100% 12 12 100% 6 4 67% 9 8 89% 6 6 100%
Methanobacterium formicicum M36508 72 59 82% 92 82 89% 52 33 63% 39 27 69% 26 17 65% 16 8 50% 11 10 91% 6 6 100% 11 5 45% 7 3 43%
Methanococcus jannaschii U67517 L77117 73 53 73% 96 67 70% 54 32 59% 39 22 56% 24 17 71% 16 16 100% 12 12 100% 8 4 50% 10 7 70% 7 3 43%
Methanococcus vannielii M36507 73 56 77% 94 70 74% 48 30 63% 40 21 53% 24 12 50% 16 16 100% 12 9 75% 6 2 33% 11 5 45% 6 2 33%
Methanospirillum hungatei M60880 71 54 76% 93 70 75% 48 27 56% 38 21 55% 26 14 54% 15 12 80% 12 12 100% 5 4 80% 11 6 55% 6 2 33%
Methanothermobacter thermautotrophicus AE000930 73 59 81% 95 79 83% 51 28 55% 38 24 63% 27 21 78% 15 15 100% 12 12 100% 5 5 100% 11 4 36% 8 3 38%
Natronobacterium innermongoliae AF009601 72 65 90% 95 77 81% 53 36 68% 40 33 83% 25 21 84% 17 17 100% 11 11 100% 5 3 60% 11 9 82% 6 6 100%
Natronorubrum bangense Y14028 72 62 86% 94 72 77% 53 32 60% 40 30 75% 26 19 73% 15 15 100% 12 12 100% 5 3 60% 10 9 90% 7 6 86%
Pyrococcus abyssi AJ248283 73 62 85% 101 79 78% 51 33 65% 40 26 65% 26 17 65% 17 17 100% 11 11 100% 8 8 100% 7 5 71% 10 5 50%
Pyrococcus furiosus U20163 73 62 85% 98 74 76% 52 36 69% 39 23 59% 26 17 65% 17 17 100% 11 11 100% 9 9 100% 7 5 71% 9 5 56%
Pyrococcus horikoshii AP000001 73 62 85% 100 79 79% 51 33 65% 40 26 65% 26 17 65% 17 17 100% 11 11 100% 8 8 100% 7 5 71% 10 5 50%
Pyrodictium occultum M21087 70 50 71% 98 71 72% 55 33 60% 40 22 55% 24 17 71% 16 11 69% 12 11 92% 8 8 100% 6 4 67% 5 0 0%
Sulfolobus acidocaldarius D14876 70 52 74% 99 84 85% 55 33 60% 39 31 79% 24 10 42% 15 8 53% 12 11 92% 8 4 50% 5 3 60% 5 0 0%
Sulfolobus P2 NPA2 70 48 69% 97 69 71% 56 24 43% 40 24 60% 24 13 54% 16 16 100% 12 7 58% 9 6 67% 5 0 0% 5 0 0%
Sulfolobus solfataricus X03235 70 52 74% 99 84 85% 55 33 60% 39 31 79% 24 10 42% 15 8 53% 12 11 92% 8 4 50% 5 3 60% 5 0 0%
Thermococcus celer M21529 75 60 80% 94 77 82% 52 36 69% 37 25 68% 26 20 77% 18 18 100% 11 11 100% 9 9 100% 9 7 78% 8 4 50%
Thermoplasma acidophilum AL445067 M38637 71 61 86% 94 77 82% 52 37 71% 40 24 60% 24 15 63% 15 15 100% 12 7 58% 7 1 14% 11 4 36% 7 3 43%
Thermoproteus tenax M35966 72 58 81% 100 79 79% 58 40 69% 37 21 57% 24 17 71% 18 18 100% 11 11 100% 10 10 100% 5 2 40% 5 0 0%
Bacteria   2-10 11-20 21-30 31-40 41-50 51-60 61-70 71-80 81-90 91-100
C1 P A C P A C P A C P A C P A C P A C P A C P A C P A C P A
Acidobacterium capsulatum D26171 65 47 72% 71 49 69% 55 26 47% 36 12 33% 26 14 54% 18 13 72% 13 3 23% 13 5 38% 7 4 57% 8 5 63%
Acinetobacter calcoaceticus M34139 72 43 60% 80 45 56% 57 26 46% 36 17 47% 29 16 55% 19 13 68% 12 7 58% 8 2 25% 10 0 0% 8 3 38%
Actinomyces israelii X82450 67 24 36% 87 25 29% 57 22 39% 43 21 49% 27 2 7% 16 5 31% 12 1 8% 4 0 0% 5 0 0% 7 0 0%
Aeromonas hydrophila X60407 69 53 77% 87 49 56% 57 24 42% 37 25 68% 33 21 64% 19 18 95% 11 5 45% 11 3 27% 11 4 36% 8 3 38%
Agrobacterium tumefaciens M11223 73 50 68% 79 55 70% 59 36 61% 32 22 69% 26 15 58% 17 14 82% 15 13 87% 12 9 75% 8 8 100% 11 8 73%
Allochromatium vinosum M26629 71 52 73% 76 49 64% 56 28 50% 36 20 56% 29 18 62% 19 8 42% 11 1 9% 10 2 20% 8 0 0% 8 0 0%
Anabaena sp. X59559 71 49 69% 82 49 60% 62 36 58% 32 20 63% 22 10 45% 17 12 71% 16 11 69% 12 6 50% 9 6 67% 10 8 80%
Aquifex aeolicus AE000709 AE000751 78 64 82% 97 78 80% 63 45 71% 36 26 72% 31 15 48% 19 16 84% 14 12 86% 8 5 63% 7 4 57% 5 2 40%
Aquifex pyrophilus M83548 80 62 78% 92 74 80% 60 46 77% 36 26 72% 31 20 65% 20 18 90% 14 12 86% 8 5 63% 7 4 57% 5 2 40%
Arthrobacter globiformis M23411 73 53 73% 86 49 57% 64 38 59% 38 20 53% 24 9 38% 16 7 44% 11 7 64% 9 6 67% 11 8 73% 8 0 0%
Azorhizobium caulinodans D11342 70 42 60% 74 43 58% 60 30 50% 33 9 27% 26 10 38% 16 9 56% 16 8 50% 11 5 45% 9 8 89% 11 8 73%
Bacillus anthracis X55059 70 59 84% 79 66 84% 51 33 65% 30 13 43% 25 9 36% 15 13 87% 8 2 25% 4 0 0% 6 2 33% 8 5 63%
Bacillus cereus X55060 69 61 88% 82 65 79% 51 36 71% 35 27 77% 24 16 67% 16 13 81% 8 3 38% 4 2 50% 7 7 100% 8 8 100%
Bacillus halodurans AB013373 74 65 88% 89 68 76% 59 37 63% 36 26 72% 30 24 80% 18 18 100% 12 7 58% 8 6 75% 9 9 100% 10 8 80%
Bacillus subtilis K00637 75 58 77% 90 65 72% 59 28 47% 37 18 49% 27 12 44% 19 14 74% 12 5 42% 8 4 50% 9 4 44% 10 5 50%
Bacteroides fragilis M61006 71 63 89% 86 71 83% 55 39 71% 43 31 72% 31 15 48% 14 7 50% 12 3 25% 8 3 38% 11 5 45% 7 2 29%
Bartonella bacilliformis Z11683 66 38 58% 72 48 67% 58 33 57% 33 24 73% 25 12 48% 17 13 76% 15 8 53% 12 7 58% 8 3 38% 8 5 63%
Bartonella henselae M73229 67 41 61% 72 50 69% 58 34 59% 33 20 61% 26 12 46% 17 13 76% 15 7 47% 12 5 42% 8 5 63% 8 3 38%
Bartonella quintana M11927 74 48 65% 80 56 70% 59 34 58% 32 20 63% 24 11 46% 17 13 76% 15 7 47% 12 3 25% 8 5 63% 11 3 27%
Beggiatoa sp. 1401-13 L40997 67 47 70% 80 52 65% 57 34 60% 34 31 91% 29 20 69% 18 13 72% 11 7 64% 13 9 69% 9 8 89% 9 6 67%
Bordetella bronchiseptica U04948 75 60 80% 89 58 65% 59 44 75% 34 25 74% 31 26 84% 17 16 94% 14 10 71% 7 5 71% 11 10 91% 9 6 67%
Bordetella parapertussis U04949 72 57 79% 84 53 63% 57 44 77% 34 24 71% 31 18 58% 12 10 83% 11 7 64% 3 2 67% 10 9 90% 6 6 100%
Bordetella pertussis U04950 72 57 79% 83 51 61% 57 42 74% 34 23 68% 31 18 58% 13 9 69% 11 7 64% 3 2 67% 10 9 90% 6 6 100%
Borrelia burgdorferi M88329 76 48 63% 94 57 61% 55 26 47% 33 19 58% 35 21 60% 15 13 87% 11 10 91% 9 6 67% 9 6 67% 10 3 30%
Borrelia hermsii U42292 75 54 72% 93 62 67% 55 25 45% 33 17 52% 34 20 59% 16 14 88% 10 8 80% 9 6 67% 9 6 67% 10 3 30%
Brachyspira hyodysenteriae U23035 70 50 71% 81 52 64% 58 27 47% 36 14 39% 26 16 62% 16 11 69% 10 5 50% 9 4 44% 10 6 60% 8 2 25%
Bradyrhizobium japonicum Z35330 74 51 69% 78 52 67% 61 32 52% 31 21 68% 26 19 73% 16 12 75% 15 10 67% 12 5 42% 9 7 78% 10 3 30%
Brevinema andersonii L31543 69 47 68% 82 47 57% 50 23 46% 36 25 69% 27 14 52% 12 10 83% 9 7 78% 10 7 70% 7 4 57% 6 6 100%
Brucella melitensis L26166 68 42 62% 69 39 57% 57 35 61% 32 24 75% 25 18 72% 17 14 82% 15 10 67% 12 9 75% 8 6 75% 8 3 38%
Buchnera sp. APS AP000398 65 45 69% 83 55 66% 55 31 56% 36 26 72% 32 24 75% 19 13 68% 12 2 17% 5 1 20% 10 9 90% 6 6 100%
Burkholderia mallei S55008 58 38 66% 76 38 50% 52 28 54% 24 11 46% 27 16 59% 17 16 94% 10 5 50% 7 3 43% 11 5 45% 9 3 33%
Burkholderia sp. U37342 72 48 67% 83 54 65% 56 35 63% 34 23 68% 30 17 57% 18 17 94% 14 5 36% 7 4 57% 11 10 91% 9 6 67%
Campylobacter jejuni Z29326 74 60 81% 87 65 75% 60 39 65% 35 22 63% 29 11 38% 15 12 80% 13 12 92% 9 9 100% 10 8 80% 7 2 29%
Campylobacter sputorum X67775 68 46 68% 77 47 61% 58 30 52% 36 19 53% 28 10 36% 15 12 80% 13 10 77% 7 5 71% 5 0 0% 5 3 60%
Chlamydia muridarum AE002280 73 57 78% 90 57 63% 62 36 58% 36 23 64% 30 23 77% 20 16 80% 12 5 42% 9 3 33% 7 2 29% 8 3 38%
Chlamydia trachomatis U68443 73 57 78% 90 57 63% 62 36 58% 36 23 64% 30 23 77% 20 16 80% 12 5 42% 9 4 44% 7 2 29% 8 3 38%
Chlamydophila pneumoniae L06108 73 59 81% 94 56 60% 60 31 52% 38 25 66% 29 17 59% 19 10 53% 12 2 17% 9 3 33% 8 3 38% 9 4 44%
Chlamydophila psittaci U68447 73 51 70% 93 63 68% 61 34 56% 37 18 49% 30 23 77% 18 15 83% 12 5 42% 9 3 33% 7 2 29% 9 4 44%
Chlorobium vibrioforme M62791 74 48 65% 79 47 59% 58 25 43% 43 22 51% 27 13 48% 13 8 62% 10 7 70% 7 2 29% 12 10 83% 5 2 40%
Chlorogloeopsis sp. PCC 7518 X68780 71 54 76% 81 50 62% 60 32 53% 35 18 51% 22 9 41% 16 8 50% 16 4 25% 12 3 25% 10 1 10% 10 5 50%
Chromohalobacter marismortui X87222 69 54 78% 81 59 73% 54 17 31% 37 17 46% 32 17 53% 19 9 47% 12 2 17% 9 5 56% 10 5 50% 8 3 38%
Citrobacter freundii M59291 67 38 57% 79 45 57% 55 24 44% 34 14 41% 32 14 44% 19 13 68% 11 2 18% 8 1 13% 9 7 78% 5 5 100%
Clostridium botulinum F L37593 65 58 89% 75 67 89% 62 39 63% 37 24 65% 22 13 59% 18 18 100% 13 10 77% 7 5 71% 10 5 50% 8 3 38%
Clostridium difficile X73450 67 50 75% 79 43 54% 61 42 69% 32 16 50% 24 15 63% 16 11 69% 11 6 55% 8 6 75% 10 10 100% 9 6 67%
Clostridium innocuum M23732 68 56 82% 88 66 75% 59 36 61% 35 25 71% 33 13 39% 15 9 60% 11 6 55% 8 2 25% 7 6 86% 11 5 45%
Clostridium perfringens M69264 72 52 72% 83 56 67% 63 30 48% 36 13 36% 24 5 21% 16 5 31% 12 4 33% 8 2 25% 10 4 40% 8 3 38%
Clostridium tetani X74770 72 50 69% 83 61 73% 62 32 52% 37 23 62% 23 12 52% 16 16 100% 11 9 82% 9 6 67% 9 5 56% 9 3 33%
Comamonas testosteroni M11224 73 47 64% 86 50 58% 58 30 52% 35 18 51% 32 20 63% 18 15 83% 13 10 77% 8 5 63% 11 6 55% 9 3 33%
Corynebacterium diphtheriae X84248 65 39 60% 82 40 49% 63 25 40% 40 13 33% 23 5 22% 17 5 29% 11 5 45% 10 4 40% 12 10 83% 7 2 29%
Coxiella burnetii M21291 69 49 71% 82 46 56% 53 26 49% 35 20 57% 33 15 45% 17 12 71% 8 4 50% 6 3 50% 10 10 100% 6 6 100%
Cristispira CP1 U42638 72 47 65% 84 40 48% 54 20 37% 32 16 50% 30 16 53% 15 14 93% 13 4 31% 7 4 57% 9 6 67% 10 0 0%
Deferribacter thermophilus U75602 75 62 83% 93 68 73% 60 42 70% 35 23 66% 29 16 55% 21 10 48% 13 2 15% 7 3 43% 9 1 11% 10 5 50%
Deinococcus radiodurans M21413 75 58 77% 85 63 74% 53 30 57% 38 25 66% 28 16 57% 15 15 100% 13 9 69% 9 8 89% 11 9 82% 7 3 43%
Desulfovibrio desulfuricans M34113 71 46 65% 91 50 55% 56 31 55% 36 25 69% 31 7 23% 16 9 56% 11 8 73% 9 6 67% 6 6 100% 10 5 50%
Dichelobacter nodosus M35016 73 58 79% 91 58 64% 56 34 61% 38 25 66% 30 15 50% 17 12 71% 11 10 91% 10 3 30% 11 9 82% 9 6 67%
Edwardsiella tarda AF015259 69 53 77% 81 50 62% 53 37 70% 34 27 79% 30 21 70% 19 17 89% 12 5 42% 9 4 44% 11 10 91% 9 6 67%
Enterococcus faecalis Y18293 68 59 87% 80 59 74% 52 33 63% 36 29 81% 27 20 74% 17 16 94% 9 4 44% 4 2 50% 7 7 100% 8 5 63%
Enterococcus faecium AF070223 69 62 90% 79 64 81% 58 35 60% 38 29 76% 30 21 70% 21 14 67% 12 4 33% 8 2 25% 9 7 78% 9 5 56%
environ.Eubacteria clone W15 NPA 67 55 82% 72 55 76% 60 44 73% 36 24 67% 30 16 53% 17 12 71% 10 10 100% 7 7 100% 13 12 92% 6 1 17%
Epulopiscium sp. M99572 66 38 58% 80 45 56% 61 17 28% 30 7 23% 22 7 32% 17 10 59% 12 3 25% 8 3 38% 10 1 10% 6 0 0%
Erysipelothrix rhusiopathiae M23728 71 60 85% 82 62 76% 54 35 65% 39 24 62% 32 22 69% 14 10 71% 12 5 42% 7 0 0% 9 0 0% 7 4 57%
Escherichia coli J01695 74 52 70% 91 64 70% 59 40 68% 36 26 72% 33 24 73% 19 17 89% 12 5 42% 9 1 11% 12 9 75% 9 4 44%
Eubacterium brachy Z36272 70 59 84% 76 65 86% 60 37 62% 38 30 79% 26 12 46% 18 11 61% 12 6 50% 5 2 40% 10 7 70% 7 4 57%
Francisella tularensis Z21931 72 39 54% 86 43 50% 56 21 38% 39 20 51% 27 5 19% 19 14 74% 12 9 75% 11 2 18% 11 5 45% 6 3 50%
Frankia sp. M55343 70 43 61% 86 51 59% 65 33 51% 36 21 58% 22 9 41% 17 14 82% 11 5 45% 10 4 40% 12 7 58% 7 3 43%
Fusobacterium necrophorum X74408 67 37 55% 80 49 61% 63 29 46% 31 15 48% 26 14 54% 17 9 53% 12 3 25% 7 1 14% 10 5 50% 8 2 25%
Fusobacterium nucleatum subsp. nucleatum M58683 67 55 82% 81 60 74% 63 45 71% 38 24 63% 27 13 48% 17 7 41% 9 6 67% 7 2 29% 8 8 100% 6 2 33%
Gemmata obscuriglobus X56305 72 57 79% 68 48 71% 58 36 62% 30 22 73% 26 13 50% 15 10 67% 19 10 53% 8 6 75% 9 4 44% 9 5 56%
Geotoga subterranea L10659 74 58 78% 82 47 57% 54 22 41% 34 19 56% 31 12 39% 16 11 69% 14 9 64% 11 5 45% 9 4 44% 9 7 78%
Gluconacetobacter liquefaciens X75617 76 27 36% 81 29 36% 58 30 52% 33 20 61% 25 12 48% 15 9 60% 13 5 38% 14 8 57% 9 9 100% 10 8 80%
Haemobartonella felis U95297 64 40 63% 75 46 61% 50 20 40% 32 8 25% 22 5 23% 12 2 17% 7 0 0% 2 0 0% 9 3 33% 6 3 50%
Haemophilus influenzae X87977 70 44 63% 80 45 56% 55 22 40% 36 13 36% 31 13 42% 12 11 92% 9 2 22% 5 0 0% 10 2 20% 6 3 50%
Haemophilus influenzae (operons A-F) U32741 U32744 U32755 U32847 U32697 U32708 75 49 65% 88 54 61% 57 29 51% 36 15 42% 34 16 47% 17 16 94% 12 5 42% 9 0 0% 11 2 18% 9 3 33%
Halomonas halodenitrificans L04942 75 38 51% 87 48 55% 54 13 24% 32 8 25% 32 13 41% 19 9 47% 12 3 25% 9 1 11% 10 5 50% 8 3 38%
Helicobacter pylori M88157 70 49 70% 81 49 60% 56 32 57% 37 22 59% 25 11 44% 16 13 81% 16 14 88% 8 5 63% 6 0 0% 8 0 0%
Heliobacterium chlorum M11212 71 40 56% 79 47 59% 64 35 55% 36 15 42% 25 11 44% 16 5 31% 12 0 0% 8 0 0% 10 4 40% 8 3 38%
Holophaga foetida X77215 68 49 72% 87 48 55% 60 33 55% 34 31 91% 29 20 69% 18 14 78% 12 5 42% 8 2 25% 6 0 0% 9 4 44%
Isosphaera pallida X64372 71 44 62% 76 49 64% 52 26 50% 34 17 50% 24 7 29% 14 8 57% 10 7 70% 5 2 40% 9 9 100% 5 3 60%
Klebsiella pneumoniae X80684 68 44 65% 80 41 51% 52 32 62% 35 19 54% 26 15 58% 15 6 40% 9 7 78% 5 3 60% 9 5 56% 6 3 50%
Lactobacillus acidophilus M58802 70 53 76% 81 52 64% 59 30 51% 34 21 62% 31 19 61% 22 19 86% 11 5 45% 4 2 50% 7 7 100% 9 4 44%
Lactococcus lactis subsp. lactis AE006456 74 63 85% 91 62 68% 57 36 63% 36 21 58% 29 19 66% 19 18 95% 11 6 55% 8 3 38% 9 7 78% 10 7 70%
Legionella pneumophila M59157 68 47 69% 82 51 62% 55 25 45% 35 19 54% 32 18 56% 19 7 37% 10 1 10% 8 3 38% 10 10 100% 7 3 43%
Leptonema illini M88719 74 47 64% 88 65 74% 65 35 54% 33 16 48% 21 12 57% 18 16 89% 12 10 83% 8 6 75% 9 5 56% 9 3 33%
Leptospira interrogans X17547 74 60 81% 84 66 79% 61 42 69% 37 24 65% 22 16 73% 15 12 80% 12 4 33% 8 2 25% 12 9 75% 8 3 38%
Leptospirillum sp. AF356830 67 41 61% 84 54 64% 56 30 54% 32 10 31% 31 21 68% 18 10 56% 11 7 64% 9 2 22% 6 3 50% 8 6 75%
Listeria monocytogenes M58822 70 60 86% 81 55 68% 55 22 40% 35 23 66% 30 25 83% 19 18 95% 13 4 31% 6 0 0% 7 2 29% 9 5 56%
Mesorhizobium loti AP003001 73 46 63% 79 53 67% 59 35 59% 32 21 66% 26 13 50% 17 8 47% 15 6 40% 12 7 58% 8 3 38% 11 5 45%
Methylobacterium sp. Z23160 68 46 68% 70 42 60% 55 20 36% 31 21 68% 25 9 36% 16 12 75% 15 13 87% 12 9 75% 9 8 89% 10 9 90%
Methylococcus capsulatus X72771 68 33 49% 84 46 55% 55 20 36% 35 9 26% 30 11 37% 18 8 44% 8 1 13% 6 0 0% 8 0 0% 6 0 0%
Micrococcus luteus M38242 70 44 63% 76 33 43% 62 24 39% 39 16 41% 18 4 22% 17 2 12% 12 7 58% 9 4 44% 9 5 56% 7 0 0%
Microcystis aeruginosa U03402 Z28699 65 50 77% 72 50 69% 61 38 62% 33 14 42% 22 9 41% 17 14 82% 16 14 88% 12 9 75% 9 9 100% 8 5 63%
Mycobacterium avium X52918 66 37 56% 77 33 43% 58 28 48% 40 18 45% 25 4 16% 17 7 41% 11 2 18% 10 0 0% 12 5 42% 7 3 43%
Mycobacterium leprae X56657 71 33 46% 86 30 35% 61 14 23% 42 3 7% 29 3 10% 18 0 0% 11 0 0% 9 0 0% 11 5 45% 8 2 25%
Mycobacterium tuberculosis X52917 67 37 55% 77 32 42% 57 12 21% 42 12 29% 25 1 4% 18 0 0% 11 0 0% 9 0 0% 11 0 0% 8 0 0%
Mycoplasma capricolum X00921 69 47 68% 90 64 71% 59 32 54% 33 16 48% 31 18 58% 13 7 54% 12 6 50% 7 2 29% 8 6 75% 11 5 45%
Mycoplasma gallisepticum M22441 66 48 73% 93 57 61% 57 35 61% 30 20 67% 28 20 71% 21 17 81% 9 9 100% 6 6 100% 8 6 75% 11 3 27%
Mycoplasma genitalium U39694 68 54 79% 95 67 71% 57 36 63% 30 22 73% 28 7 25% 20 8 40% 9 5 56% 6 2 33% 8 4 50% 8 0 0%
Mycoplasma hyopneumoniae Y00149 69 57 83% 89 69 78% 59 34 58% 38 22 58% 30 25 83% 16 15 94% 11 7 64% 8 7 88% 8 7 88% 9 4 44%
Mycoplasma mycoides M23943 63 33 52% 80 45 56% 54 26 48% 32 14 44% 31 11 35% 14 1 7% 11 0 0% 6 0 0% 7 0 0% 7 0 0%
Mycoplasma pneumoniae M29061 65 46 71% 90 68 76% 56 29 52% 30 23 77% 27 12 44% 21 7 33% 9 5 56% 5 2 40% 6 5 83% 6 0 0%
Myxococcus xanthus M34114 75 54 72% 88 58 66% 59 32 54% 37 19 51% 29 20 69% 18 6 33% 15 9 60% 4 3 75% 6 4 67% 6 5 83%
Neisseria gonorrhoeae X07714 73 52 71% 87 58 67% 59 29 49% 35 21 60% 32 15 47% 18 17 94% 12 10 83% 9 6 67% 11 11 100% 9 6 67%
Neisseria meningitidis AE002364 73 59 81% 88 65 74% 59 38 64% 35 23 66% 32 15 47% 18 17 94% 12 10 83% 9 6 67% 11 11 100% 9 6 67%
Nocardia asteroides X80606 65 40 62% 76 30 39% 61 22 36% 38 15 39% 23 6 26% 17 9 53% 11 5 45% 10 6 60% 12 7 58% 7 1 14%
Oscillatoria agardhii X84811 67 52 78% 78 54 69% 62 31 50% 33 24 73% 23 12 52% 15 11 73% 16 13 81% 11 7 64% 10 6 60% 10 8 80%
Pasteurella multocida M35018 71 48 68% 85 53 62% 56 19 34% 36 17 47% 34 17 50% 18 11 61% 10 1 10% 7 3 43% 10 5 50% 7 3 43%
Petrotoga miotherma L10657 68 54 79% 70 53 76% 52 31 60% 31 16 52% 20 11 55% 11 5 45% 9 2 22% 10 5 50% 5 0 0% 6 0 0%
Pirellula marina X62912 67 41 61% 79 42 53% 57 23 40% 35 13 37% 17 5 29% 14 5 36% 14 0 0% 11 0 0% 9 0 0% 9 0 0%
Pirellula staleyi M34126 73 51 70% 82 54 66% 56 26 46% 36 16 44% 26 10 38% 18 12 67% 13 7 54% 13 2 15% 8 0 0% 9 4 44%
Planctomycetaceae Schlesner 670 X81948 71 52 73% 78 59 76% 57 38 67% 31 24 77% 26 17 65% 21 21 100% 14 7 50% 12 4 33% 8 5 63% 11 0 0%
Plesiomonas shigelloides X74688 71 51 72% 82 49 60% 52 26 50% 33 14 42% 28 15 54% 14 12 86% 9 2 22% 5 1 20% 10 8 80% 6 6 100%
Pleurocapsa sp. X78681 66 49 74% 78 39 50% 61 27 44% 33 26 79% 22 8 36% 18 8 44% 16 11 69% 11 5 45% 10 8 80% 10 8 80%
Porphyromonas gingivalis L16492 69 46 67% 78 37 47% 54 25 46% 41 20 49% 31 6 19% 14 0 0% 9 5 56% 6 2 33% 8 0 0% 6 0 0%
Proteus vulgaris X07652 73 54 74% 92 57 62% 59 26 44% 36 25 69% 33 18 55% 19 13 68% 11 2 18% 10 1 10% 11 8 73% 9 6 67%
Pseudomonas aeruginosa M34133 71 46 65% 79 44 56% 56 34 61% 37 26 70% 30 27 90% 18 16 89% 10 3 30% 5 0 0% 9 5 56% 8 3 38%
Pseudomonas putida D84020 73 52 71% 87 54 62% 58 31 53% 38 21 55% 30 15 50% 18 14 78% 11 5 45% 10 4 40% 11 11 100% 9 6 67%
Pseudomonas sp. U37339 68 48 71% 82 56 68% 56 38 68% 38 31 82% 30 21 70% 18 16 89% 11 3 27% 9 0 0% 10 5 50% 6 3 50%
Psychrobacter pacificensis AB016054 72 42 58% 89 44 49% 58 24 41% 37 20 54% 30 15 50% 19 12 63% 11 7 64% 10 3 30% 12 10 83% 8 6 75%
Rhodobium orientis D30792 69 47 68% 69 48 70% 57 38 67% 32 19 59% 26 13 50% 17 14 82% 15 10 67% 12 9 75% 9 9 100% 8 8 100%
Rhodoblastus acidophilus M34128 70 51 73% 71 44 62% 59 33 56% 33 20 61% 26 14 54% 16 14 88% 15 11 73% 9 6 67% 7 7 100% 10 8 80%
Rhodococcus erythropolis AF001265 73 45 62% 82 45 55% 64 37 58% 38 21 55% 22 10 45% 16 16 100% 11 5 45% 10 1 10% 13 5 38% 7 1 14%
Rickettsia bellii U11014 74 49 66% 82 55 67% 57 37 65% 38 24 63% 29 22 76% 16 16 100% 13 8 62% 13 6 46% 8 7 88% 10 8 80%
Rickettsia prowazekii M21789 74 51 69% 82 56 68% 57 37 65% 38 24 63% 29 22 76% 16 16 100% 13 8 62% 13 6 46% 8 5 63% 10 8 80%
Rickettsia rickettsii L36217 69 40 58% 73 45 62% 55 35 64% 38 24 63% 29 22 76% 16 16 100% 13 9 69% 13 6 46% 8 6 75% 9 8 89%
Salmonella typhimurium X80681 71 45 63% 89 59 66% 56 33 59% 37 23 62% 32 18 56% 19 13 68% 12 2 17% 9 1 11% 11 8 73% 9 4 44%
Serratia marcescens M59160 69 52 75% 80 43 54% 58 29 50% 35 18 51% 33 21 64% 19 9 47% 11 2 18% 8 1 13% 10 9 90% 7 6 86%
Shewanella putrefaciens X81623 73 49 67% 86 54 63% 57 28 49% 36 15 42% 33 16 48% 19 10 53% 11 2 18% 10 1 10% 11 8 73% 9 6 67%
Shigella dysenteriae X96966 69 39 57% 80 43 54% 56 32 57% 37 22 59% 32 24 75% 18 17 94% 12 3 25% 9 1 11% 10 9 90% 9 4 44%
Spirochaeta aurantia M57740 77 62 81% 90 69 77% 54 33 61% 37 20 54% 30 16 53% 16 10 63% 9 7 78% 4 2 50% 8 7 88% 7 6 86%
Staphylococcus aureus L36472 76 61 80% 87 62 71% 56 26 46% 35 17 49% 31 16 52% 18 15 83% 12 5 42% 8 4 50% 9 7 78% 10 3 30%
Streptobacillus moniliformis Z35305 67 37 55% 81 35 43% 58 23 40% 38 13 34% 26 11 42% 15 11 73% 12 5 42% 8 4 50% 9 2 22% 8 0 0%
Streptococcus mutans X58303 64 50 78% 71 51 72% 48 23 48% 31 23 74% 23 10 43% 16 10 63% 7 1 14% 4 0 0% 10 8 80% 5 5 100%
Streptococcus pneumoniae X58312 63 53 84% 70 55 79% 51 28 55% 31 24 77% 23 14 61% 16 12 75% 7 1 14% 4 0 0% 7 6 86% 7 7 100%
Streptococcus pyogenes X59029 61 40 66% 66 34 52% 50 14 28% 30 13 43% 21 7 33% 14 8 57% 7 0 0% 4 0 0% 8 0 0% 6 0 0%
Streptomyces acidiscabies D63865 71 51 72% 85 52 61% 62 27 44% 39 22 56% 26 15 58% 16 11 69% 10 5 50% 10 5 50% 14 8 57% 7 2 29%
Streptomyces albidoflavus Z76676 69 50 72% 75 50 67% 61 31 51% 40 18 45% 25 10 40% 16 8 50% 10 2 20% 10 1 10% 14 10 71% 7 5 71%
Streptomyces albus X53163 57 42 74% 70 44 63% 47 29 62% 36 26 72% 19 7 37% 13 5 38% 7 0 0% 4 0 0% 12 0 0% 6 0 0%
Streptomyces ambofaciens M27245 71 52 73% 85 45 53% 62 28 45% 39 20 51% 26 11 42% 16 8 50% 10 5 50% 9 0 0% 14 5 36% 8 2 25%
Streptomyces bikiniensis X79851 70 46 66% 85 45 53% 62 32 52% 40 21 53% 25 15 60% 16 16 100% 10 5 50% 10 1 10% 14 5 36% 7 2 29%
Streptomyces bluensis X79324 71 49 69% 84 47 56% 63 36 57% 40 24 60% 25 13 52% 15 11 73% 10 3 30% 9 4 44% 14 8 57% 8 3 38%
Streptomyces bottropensis D63868 71 46 65% 85 41 48% 62 32 52% 39 10 26% 26 9 35% 16 11 69% 10 5 50% 9 4 44% 14 8 57% 8 3 38%
Streptomyces brasiliensis X53162 62 41 66% 70 37 53% 47 29 62% 37 22 59% 16 7 44% 13 13 100% 7 2 29% 6 0 0% 10 5 50% 6 3 50%
Streptomyces caelestis X80824 71 52 73% 84 50 60% 62 38 61% 40 22 55% 25 13 52% 16 11 69% 10 3 30% 9 4 44% 14 8 57% 8 3 38%
Streptomyces coelicolor Y00411 70 50 71% 82 47 57% 62 28 45% 39 15 38% 25 14 56% 16 11 69% 10 3 30% 10 4 40% 13 13 100% 8 6 75%
Streptomyces diastaticus X53161 59 43 73% 67 41 61% 47 26 55% 34 20 59% 13 6 46% 8 5 63% 5 5 100% 7 2 29% 10 5 50% 5 2 40%
Streptomyces diastatochromogenes D63867 71 52 73% 85 55 65% 62 35 56% 39 19 49% 26 12 46% 16 11 69% 10 5 50% 9 4 44% 14 8 57% 8 3 38%
Streptomyces espinosus X80826 71 52 73% 83 46 55% 62 23 37% 40 16 40% 25 11 44% 16 11 69% 10 10 100% 9 5 56% 14 3 21% 8 0 0%
Streptomyces eurythermus D63870 71 51 72% 83 53 64% 63 31 49% 40 16 40% 25 14 56% 16 16 100% 10 5 50% 10 4 40% 14 8 57% 7 3 43%
Streptomyces felleus Z76681 69 50 72% 75 50 67% 61 31 51% 40 18 45% 25 10 40% 16 8 50% 10 2 20% 10 1 10% 14 10 71% 7 5 71%
Streptomyces galbus X79325 70 48 69% 83 45 54% 62 34 55% 40 21 53% 25 14 56% 15 6 40% 10 3 30% 10 5 50% 14 8 57% 7 2 29%
Streptomyces glaucescens X79322 70 55 79% 82 43 52% 64 32 50% 40 24 60% 25 18 72% 16 16 100% 10 5 50% 9 4 44% 14 13 93% 8 6 75%
Streptomyces gougerotii Z76687 69 49 71% 76 40 53% 60 26 43% 41 21 51% 24 6 25% 16 5 31% 11 2 18% 9 1 11% 15 5 33% 7 1 14%
Streptomyces griseus X61478 70 41 59% 84 38 45% 63 35 56% 39 16 41% 26 14 54% 14 10 71% 10 3 30% 10 1 10% 14 5 36% 7 2 29%
Streptomyces hygroscopicus X79853 71 43 61% 84 38 45% 62 31 50% 40 15 38% 25 16 64% 15 6 40% 10 3 30% 10 5 50% 14 8 57% 7 2 29%
Streptomyces intermedius Z76686 68 49 72% 76 41 54% 60 34 57% 40 24 60% 25 16 64% 16 16 100% 10 5 50% 10 5 50% 14 8 57% 7 2 29%
Streptomyces lavendulae X53173 61 49 80% 66 53 80% 44 34 77% 37 25 68% 17 10 59% 12 8 67% 7 0 0% 6 0 0% 10 5 50% 6 3 50%
Streptomyces limosus Z76679 69 50 72% 75 50 67% 61 31 51% 40 18 45% 25 10 40% 16 8 50% 10 2 20% 10 1 10% 14 10 71% 7 5 71%
Streptomyces lincolnensis X79854 71 49 69% 84 47 56% 62 34 55% 41 19 46% 24 10 42% 15 6 40% 11 4 36% 9 4 44% 15 9 60% 7 1 14%
Streptomyces macrosporus Z68099 69 54 78% 79 47 59% 59 30 51% 39 20 51% 27 9 33% 16 5 31% 10 0 0% 10 1 10% 13 5 38% 7 2 29%
Streptomyces mashuensis X79323 69 52 75% 81 48 59% 64 38 59% 39 28 72% 25 18 72% 17 17 100% 10 5 50% 9 4 44% 13 7 54% 8 3 38%
Streptomyces megasporus Z68100 67 53 79% 82 53 65% 61 31 51% 40 27 68% 26 13 50% 16 13 81% 11 6 55% 8 4 50% 16 14 88% 7 5 71%
Streptomyces neyagawaensis D63869 71 55 77% 85 52 61% 62 36 58% 39 19 49% 26 12 46% 16 11 69% 10 5 50% 9 0 0% 14 0 0% 8 0 0%
Streptomyces nodosus AF114033 71 56 79% 84 57 68% 62 35 56% 39 23 59% 26 11 42% 16 8 50% 10 0 0% 10 0 0% 14 5 36% 7 0 0%
Streptomyces odorifer Z76682 69 50 72% 76 50 66% 61 31 51% 40 18 45% 25 10 40% 16 8 50% 10 2 20% 10 1 10% 14 10 71% 7 5 71%
Streptomyces ornatus X79326 70 37 53% 84 33 39% 60 28 47% 39 16 41% 26 5 19% 15 5 33% 10 0 0% 9 0 0% 14 5 36% 8 3 38%
Streptomyces pseudogriseolus X80827 70 55 79% 84 47 56% 62 30 48% 40 22 55% 25 18 72% 16 16 100% 10 5 50% 9 4 44% 14 13 93% 8 6 75%
Streptomyces purpureus X53170 56 37 66% 68 35 51% 45 26 58% 37 14 38% 18 6 33% 8 8 100% 5 0 0% 6 0 0% 9 0 0% 5 0 0%
Streptomyces rimosus X62884 70 44 63% 84 48 57% 62 32 52% 38 14 37% 23 8 35% 15 8 53% 10 7 70% 9 2 22% 14 10 71% 8 6 75%
Streptomyces rutgersensis Z76688 69 49 71% 76 40 53% 60 26 43% 41 21 51% 24 6 25% 16 5 31% 11 2 18% 9 1 11% 15 5 33% 7 1 14%
Streptomyces sampsonii D63871 71 56 79% 84 48 57% 63 32 51% 40 23 58% 25 18 72% 16 16 100% 10 5 50% 10 5 50% 14 13 93% 7 5 71%
Streptomyces scabiei D63862 73 48 66% 85 45 53% 62 33 53% 39 19 49% 26 12 46% 17 12 71% 10 5 50% 9 4 44% 13 2 15% 8 0 0%
Streptomyces setonii D63872 71 51 72% 85 48 56% 63 34 54% 39 21 54% 26 16 62% 15 11 73% 10 3 30% 10 1 10% 14 5 36% 7 2 29%
Streptomyces sp. D63866 71 43 61% 84 47 56% 62 34 55% 39 23 59% 26 15 58% 16 11 69% 10 5 50% 10 5 50% 14 8 57% 7 2 29%
Streptomyces subrutilus X80825 71 48 68% 84 47 56% 62 36 58% 40 21 53% 25 15 60% 16 12 75% 10 2 20% 10 1 10% 13 5 38% 7 2 29%
Streptomyces tendae D63873 71 51 72% 84 53 63% 62 30 48% 40 21 53% 25 10 40% 16 8 50% 10 5 50% 9 0 0% 14 5 36% 8 3 38%
Streptomyces thermodiastaticus Z68101 69 48 70% 76 41 54% 61 29 48% 40 19 48% 25 9 36% 16 3 19% 9 0 0% 9 0 0% 13 0 0% 8 0 0%
Streptomyces thermolineatus Z68097 69 49 71% 79 51 65% 60 32 53% 39 18 46% 26 10 38% 16 13 81% 10 2 20% 10 0 0% 14 5 36% 7 3 43%
Streptomyces thermoviolaceus Z68096 69 48 70% 78 45 58% 61 28 46% 40 17 43% 25 14 56% 16 16 100% 10 5 50% 9 4 44% 14 8 57% 8 3 38%
Streptomyces thermovulgaris Z68098 72 50 69% 78 50 64% 60 38 63% 42 25 60% 24 12 50% 16 11 69% 11 4 36% 9 3 33% 15 4 27% 7 0 0%
Synechococcus sp. PCC 6301 X03538 69 41 59% 81 48 59% 61 40 66% 33 18 55% 23 18 78% 18 11 61% 16 14 88% 11 8 73% 10 10 100% 10 8 80%
Synechocystis sp. PCC 6803 D64000 D90916 71 38 54% 81 46 57% 63 27 43% 34 9 26% 22 5 23% 17 9 53% 16 6 38% 11 3 27% 8 1 13% 11 5 45%
Thermomicrobium roseum M34115 70 49 70% 89 63 71% 62 31 50% 32 19 59% 24 13 54% 22 4 18% 12 0 0% 5 0 0% 9 0 0% 10 0 0%
Thermotoga maritima M21774 76 63 83% 95 75 79% 58 32 55% 36 27 75% 30 13 43% 19 15 79% 12 8 67% 8 5 63% 11 8 73% 9 7 78%
Thermus aquaticus L09663 70 59 84% 81 56 69% 49 26 53% 41 25 61% 31 20 65% 14 9 64% 12 5 42% 9 3 33% 12 9 75% 7 4 57%
Thermus thermophilus X07998 79 63 80% 85 66 78% 52 31 60% 42 26 62% 31 16 52% 12 5 42% 12 8 67% 9 3 33% 13 5 38% 6 4 67%
Treponema pallidum (rRNA A) AE001204 76 56 74% 92 61 66% 54 32 59% 37 26 70% 32 24 75% 18 9 50% 11 2 18% 9 0 0% 10 3 30% 9 4 44%
Tropheryma whipplei mw040 X99636 71 57 80% 85 59 69% 64 39 61% 40 20 50% 23 12 52% 17 13 76% 11 7 64% 10 3 30% 12 10 83% 7 4 57%
Ureaplasma urealyticum AE002112 70 51 73% 92 62 67% 55 38 69% 29 15 52% 28 13 46% 22 13 59% 9 6 67% 6 2 33% 6 4 67% 9 3 33%
Vibrio cholerae X76337 73 61 84% 88 63 72% 57 29 51% 37 19 51% 32 19 59% 19 19 100% 11 5 45% 10 4 40% 11 11 100% 9 4 44%
Vibrio parahaemolyticus X56580 64 39 61% 80 39 49% 56 23 41% 38 18 47% 31 10 32% 17 9 53% 8 2 25% 6 1 17% 10 10 100% 6 4 67%
Xanthomonas albilineans X95918 69 50 72% 82 43 52% 59 30 51% 35 14 40% 32 5 16% 18 10 56% 11 7 64% 10 2 20% 9 1 11% 9 3 33%
Xanthomonas campestris NPA 68 42 62% 79 37 47% 58 25 43% 37 12 32% 32 7 22% 18 9 50% 11 7 64% 10 2 20% 8 5 63% 6 3 50%
Xylella fastidiosa AE003861 71 42 59% 87 48 55% 60 34 57% 36 8 22% 32 5 16% 18 10 56% 11 7 64% 10 2 20% 10 4 40% 9 3 33%
Yersinia pestis L37604 68 49 72% 82 57 70% 56 31 55% 36 21 58% 33 22 67% 18 15 83% 11 5 45% 7 1 14% 10 9 90% 6 6 100%
Yersinia pseudotuberculosis Z21939 70 49 70% 84 57 68% 57 31 54% 36 21 58% 33 22 67% 19 15 79% 11 4 36% 7 1 14% 10 8 80% 6 6 100%
Eukaryotic Chloroplast   2-10 11-20 21-30 31-40 41-50 51-60 61-70 71-80 81-90 91-100
C1 P A C P A C P A C P A C P A C P A C P A C P A C P A C P A
Apodanthes sp NPA 64 43 67% 84 61 73% 58 29 50% 33 16 48% 23 15 65% 18 9 50% 9 3 33% 13 6 46% 12 6 50% 8 2 25%
Astasia longa X14386 68 35 51% 74 42 57% 60 32 53% 38 22 58% 25 14 56% 17 13 76% 15 13 87% 11 11 100% 13 7 54% 11 2 18%
Babesia bovis U06105 55 27 49% 80 41 51% 59 34 58% 32 25 78% 22 9 41% 15 5 33% 12 5 42% 10 4 40% 11 10 91% 11 7 64%
Chlamydomonas humicola AF374186 63 46 73% 70 43 61% 49 27 55% 30 18 60% 22 16 73% 16 11 69% 7 7 100% 7 7 100% 6 5 83% 6 5 83%
Chlamydomonas reinhardtii J01395 71 43 61% 74 46 62% 59 37 63% 33 25 76% 29 16 55% 13 7 54% 14 10 71% 11 7 64% 7 0 0% 10 0 0%
Chlorella vulgaris AB001684 70 52 74% 79 52 66% 68 54 79% 34 26 76% 21 17 81% 17 13 76% 16 10 63% 10 10 100% 9 7 78% 9 7 78%
Corethron criophilum NPA 68 43 63% 75 45 60% 61 32 52% 30 21 70% 24 6 25% 18 10 56% 15 9 60% 11 7 64% 9 6 67% 10 4 40%
Cryptomonas sp. X56805 68 37 54% 79 48 61% 58 31 53% 34 10 29% 24 11 46% 18 8 44% 15 5 33% 13 2 15% 9 5 56% 10 0 0%
Cyanidium caldarium X52985 70 46 66% 78 52 67% 59 37 63% 33 20 61% 24 6 25% 18 15 83% 14 10 71% 13 7 54% 11 8 73% 8 6 75%
Cyanophora paradoxa X81840 70 48 69% 82 50 61% 64 44 69% 32 25 78% 23 14 61% 18 17 94% 12 7 58% 8 2 25% 12 10 83% 8 5 63%
Cynomorium coccineum U67743 66 30 45% 73 25 34% 56 14 25% 30 6 20% 24 5 21% 14 2 14% 15 8 53% 10 6 60% 11 8 73% 9 3 33%
Cytinus ruber U47845 66 38 58% 75 47 63% 59 31 53% 34 19 56% 23 10 43% 17 11 65% 15 9 60% 11 5 45% 10 8 80% 10 3 30%
Emiliania huxleyi X82156 67 42 63% 76 45 59% 60 35 58% 32 22 69% 26 14 54% 15 12 80% 17 11 65% 11 5 45% 9 2 22% 9 4 44%
Euglena gracilis X12890 V00159 69 30 43% 83 32 39% 59 10 17% 35 8 23% 25 1 4% 14 0 0% 11 0 0% 6 0 0% 11 0 0% 8 0 0%
Glaucocystis nostochinearum X82496 71 49 69% 82 44 54% 59 29 49% 33 29 88% 21 11 52% 22 11 50% 12 7 58% 8 2 25% 7 5 71% 10 7 70%
Gloeochaete wittrockiana X82495 71 48 68% 83 49 59% 60 33 55% 34 24 71% 22 6 27% 19 12 63% 13 7 54% 8 2 25% 7 5 71% 9 6 67%
Heterosigma akashiwo M82860 66 51 77% 80 60 75% 64 40 63% 34 27 79% 27 12 44% 18 11 61% 14 5 36% 6 2 33% 11 9 82% 9 6 67%
Hydnora africana U67745 65 46 71% 77 58 75% 63 30 48% 29 24 83% 20 12 60% 18 18 100% 12 8 67% 10 4 40% 8 4 50% 5 2 40%
Marchantia polymorpha X04465 64 48 75% 79 51 65% 56 35 63% 36 22 61% 23 17 74% 15 7 47% 14 5 36% 12 6 50% 8 0 0% 10 5 50%
Mitrastema yamamotoi U67742 64 30 47% 73 29 40% 55 22 40% 30 8 27% 22 8 36% 17 9 53% 18 2 11% 8 0 0% 8 0 0% 9 0 0%
Nicotiana tabacum V00165 66 44 67% 82 38 46% 56 27 48% 33 14 42% 25 8 32% 14 11 79% 16 10 63% 12 6 50% 8 6 75% 9 0 0%
Palmaria palmata Z18289 67 42 63% 77 38 49% 57 28 49% 33 22 67% 23 11 48% 17 10 59% 16 9 56% 12 10 83% 9 3 33% 11 5 45%
Pilostyles thurberi U67741 57 20 35% 81 39 48% 49 25 51% 34 21 62% 25 12 48% 13 8 62% 14 10 71% 12 5 42% 7 0 0% 7 0 0%
Plasmodium falciparum (plastid-like) X57167 X95275 69 33 48% 83 35 42% 50 16 32% 33 9 27% 27 8 30% 10 4 40% 11 4 36% 9 0 0% 9 0 0% 10 0 0%
Plasmodium vivax AF040974 39 15 38% 40 17 43% 29 11 38% 28 13 46% 21 8 38% 14 12 86% 10 5 50% 6 0 0% 6 0 0% 3 0 0%
Polytoma obtusum AF374187 59 38 64% 71 46 65% 47 22 47% 30 17 57% 26 13 50% 15 11 73% 8 2 25% 6 5 83% 5 0 0% 7 0 0%
Polytoma oviforme AF374188 64 47 73% 68 41 60% 48 23 48% 32 21 66% 24 17 71% 12 12 100% 7 7 100% 5 0 0% 8 8 100% 5 3 60%
Polytoma uvella AF374189 70 40 57% 95 51 54% 63 18 29% 31 11 35% 29 7 24% 17 4 24% 10 3 30% 9 5 56% 3 1 33% 7 0 0%
Pylaiella littoralis X14873 64 39 61% 81 38 47% 59 16 27% 31 17 55% 23 2 9% 19 5 26% 14 2 14% 6 0 0% 12 4 33% 8 3 38%
Ricinus communis L37580 64 45 70% 73 40 55% 61 31 51% 34 17 50% 23 13 57% 15 10 67% 15 6 40% 12 8 67% 8 3 38% 8 0 0%
Skeletonema pseudocostatum X82155 68 35 51% 76 44 58% 61 33 54% 29 15 52% 24 3 13% 18 10 56% 14 7 50% 10 2 20% 10 5 50% 9 3 33%
Toxoplasma gondii (plastid-like) U87145 62 32 52% 74 35 47% 66 30 45% 43 20 47% 16 2 13% 13 9 69% 24 20 83% 13 9 69% 13 11 85% 8 8 100%
Zea mays Z00028 69 44 64% 81 36 44% 62 29 47% 33 16 48% 23 10 43% 14 9 64% 16 11 69% 11 10 91% 8 6 75% 9 2 22%
Eukaryotic Mitochondrion   2-10 11-20 21-30 31-40 41-50 51-60 61-70 71-80 81-90 91-100
C1 P A C P A C P A C P A C P A C P A C P A C P A C P A C P A
Acanthamoeba castellanii U03732 65 29 45% 69 35 51% 54 23 43% 28 12 43% 24 6 25% 18 5 28% 12 5 42% 13 5 38% 14 5 36% 8 2 25%
Afrixalus fornasini NPA 39 16 41% 36 12 33% 28 9 32% 8 0 0% 9 5 56% 9 5 56% 8 3 38% 6 0 0% 7 0 0% 0 0 0%
Albinaria caerulea X83390 28 11 39% 37 15 41% 28 15 54% 8 1 13% 7 3 43% 8 1 13% 5 1 20% 7 4 57% 5 4 80% 1 0 0%
Alligator mississippiensis L28074 29 17 59% 41 18 44% 23 8 35% 10 8 80% 10 3 30% 9 0 0% 7 0 0% 5 0 0% 6 0 0% 4 0 0%
Amblysomus hottentotus M95108 42 13 31% 42 20 48% 27 9 33% 12 3 25% 9 3 33% 5 3 60% 11 5 45% 6 0 0% 8 0 0% 1 0 0%
Anas platyrhynchos L16770 41 12 29% 44 24 55% 29 19 66% 14 2 14% 7 3 43% 7 0 0% 10 0 0% 4 0 0% 6 0 0% 2 0 0%
Anopheles gambiae L20934 33 16 48% 41 21 51% 27 9 33% 10 1 10% 4 0 0% 11 0 0% 8 0 0% 4 0 0% 4 0 0% 1 0 0%
Anopheles quadrimaculatus L04272 33 16 48% 41 21 51% 28 10 36% 10 1 10% 4 0 0% 10 2 20% 8 3 38% 4 0 0% 4 0 0% 1 0 0%
Antilocapra americana M55540 41 18 44% 47 18 38% 36 13 36% 10 4 40% 8 6 75% 8 5 63% 8 0 0% 7 2 29% 9 2 22% 2 2 100%
Apis mellifera L06178 S51650 28 8 29% 42 15 36% 26 10 38% 8 1 13% 11 0 0% 7 0 0% 3 0 0% 2 0 0% 1 0 0% 9 0 0%
Artemia franciscana X69067 31 3 10% 32 5 16% 20 1 5% 11 0 0% 9 0 0% 5 0 0% 4 0 0% 9 0 0% 5 0 0% 1 0 0%
Ascaris suum X54253 30 5 17% 30 9 30% 16 2 13% 10 4 40% 7 0 0% 9 0 0% 6 0 0% 3 1 33% 2 0 0% 4 0 0%
Aspergillus nidulans J01393 57 32 56% 69 45 65% 55 19 35% 30 10 33% 21 5 24% 14 5 36% 11 0 0% 14 0 0% 12 0 0% 6 0 0%
Asterina pectinifera D16387 35 17 49% 38 24 63% 26 13 50% 12 5 42% 3 2 67% 4 2 50% 9 2 22% 4 4 100% 3 0 0% 7 0 0%
Balaenoptera musculus X72204 40 23 58% 43 28 65% 26 11 42% 11 11 100% 8 7 88% 7 4 57% 11 8 73% 7 0 0% 10 2 20% 1 1 100%
Bos taurus J01394 V00654 39 25 64% 43 23 53% 29 13 45% 10 4 40% 8 3 38% 9 1 11% 9 8 89% 7 2 29% 9 0 0% 1 0 0%
Bufo boreas boreas Thesis, Goebel A. 37 12 32% 35 11 31% 28 9 32% 9 3 33% 10 8 80% 8 4 50% 9 4 44% 7 0 0% 5 1 20% 2 2 100%
Bufo peltocephalus Thesis, Goebel A. 35 7 20% 34 16 47% 26 9 35% 11 4 36% 8 7 88% 8 4 50% 9 4 44% 7 2 29% 5 1 20% 3 3 100%
Caenorhabditis elegans X54252 28 4 14% 34 11 32% 19 5 26% 9 0 0% 9 0 0% 10 0 0% 6 1 17% 4 4 100% 1 0 0% 4 3 75%
Cafeteria roenbergensis AF193903 52 15 29% 75 26 35% 48 22 46% 41 11 27% 23 9 39% 15 7 47% 15 8 53% 7 2 29% 15 5 33% 9 3 33%
Ceratophrys sp. Thesis, Goebel A. 33 20 61% 37 25 68% 28 15 54% 9 1 11% 9 5 56% 8 1 13% 7 0 0% 7 0 0% 5 0 0% 3 0 0%
Chlamydomonas eugametos AF008237 44 23 52% 61 32 52% 49 38 78% 27 16 59% 22 16 73% 17 13 76% 14 7 50% 11 5 45% 7 6 86% 8 3 38%
Chlamydomonas reinhardtii X54860 30 17 57% 52 20 38% 40 16 40% 17 8 47% 10 3 30% 11 0 0% 15 5 33% 9 1 11% 12 3 25% 3 0 0%
Chondrus crispus Z30950 Z47547 61 23 38% 73 29 40% 49 17 35% 35 13 37% 22 3 14% 17 3 18% 13 5 38% 4 2 50% 3 0 0% 4 0 0%
Chorthippus parallelus ESC X95574 24 6 25% 37 13 35% 27 2 7% 12 0 0% 8 0 0% 11 0 0% 4 0 0% 8 0 0% 10 0 0% 1 1 100%
Chorthippus parallelus NOR X95575 24 6 25% 37 13 35% 27 2 7% 12 0 0% 8 0 0% 11 0 0% 4 0 0% 8 0 0% 10 0 0% 1 1 100%
Chrysodidymus synuroideus NPA 62 28 45% 86 44 51% 50 17 34% 29 7 24% 28 12 43% 19 10 53% 16 13 81% 6 2 33% 18 5 28% 10 5 50%
Chrysodidymus synuroideus mg AF222718 64 31 48% 89 50 56% 56 20 36% 33 7 21% 28 11 39% 19 10 53% 16 9 56% 7 1 14% 17 5 29% 10 5 50%
Coscoroba coscoroba S76216 40 22 55% 44 31 70% 30 17 57% 15 3 20% 7 0 0% 7 4 57% 12 9 75% 4 2 50% 5 0 0% 3 0 0%
Coturnix coturnix X57245 33 12 36% 42 20 48% 25 13 52% 14 5 36% 7 2 29% 9 4 44% 11 0 0% 5 0 0% 4 0 0% 4 0 0%
Crithidia fasciculata X02548 9 0 0% 10 0 0% 13 5 38% 8 3 38% 4 0 0% 2 0 0% 1 0 0% 0 0 0% 0 0 0% 3 0 0%
Crossostoma lacustre M91245 39 16 41% 43 24 56% 31 15 48% 13 10 77% 10 9 90% 8 4 50% 11 2 18% 6 2 33% 6 4 67% 0 0 0%
Cygnus melancoryphus S76217 44 16 36% 43 31 72% 30 25 83% 15 5 33% 6 2 33% 8 6 75% 12 5 42% 4 0 0% 5 0 0% 3 0 0%
Cyprinus carpio X61010 35 23 66% 38 19 50% 34 23 68% 12 11 92% 10 9 90% 8 6 75% 11 7 64% 7 4 57% 5 3 60% 3 0 0%
Damaliscus pygargus M86499 35 22 63% 47 17 36% 28 7 25% 12 0 0% 7 0 0% 9 0 0% 7 0 0% 8 0 0% 9 0 0% 2 0 0%
Daphnia pulex Z15015 31 5 16% 34 10 29% 21 3 14% 14 0 0% 6 0 0% 7 3 43% 5 1 20% 8 5 63% 5 0 0% 8 5 63%
Dictyostelium discoideum D16466 49 20 41% 66 26 39% 48 23 48% 27 18 67% 20 10 50% 6 2 33% 14 6 43% 11 7 64% 4 0 0% 8 5 63%
Didelphis virginiana Z29573 40 12 30% 42 24 57% 28 16 57% 14 7 50% 10 6 60% 6 1 17% 11 0 0% 5 0 0% 9 0 0% 0 0 0%
Drosophila teissieri X54011 32 10 31% 44 16 36% 28 14 50% 9 0 0% 4 0 0% 3 0 0% 9 0 0% 5 0 0% 6 0 0% 0 0 0%
Drosophila virilis X05914 37 7 19% 47 13 28% 28 7 25% 14 0 0% 4 0 0% 8 0 0% 9 0 0% 8 0 0% 6 0 0% 0 0 0%
Drosophila yakuba X03240 32 10 31% 44 16 36% 28 14 50% 9 0 0% 4 0 0% 4 0 0% 8 0 0% 5 0 0% 6 0 0% 0 0 0%
Eleutherodactylus coqui NPA 31 7 23% 26 13 50% 28 8 29% 7 2 29% 9 3 33% 3 0 0% 11 0 0% 7 0 0% 3 1 33% 7 4 57%
Equus caballus X79547 35 17 49% 46 35 76% 26 12 46% 13 8 62% 7 4 57% 10 5 50% 8 0 0% 6 0 0% 10 2 20% 2 2 100%
Farfantepenaeus notialis X84357 29 10 34% 39 30 77% 28 11 39% 11 0 0% 6 0 0% 7 0 0% 14 0 0% 6 0 0% 4 0 0% 3 0 0%
Felis catus U20753 37 14 38% 41 12 29% 27 9 33% 13 10 77% 8 7 88% 9 4 44% 10 0 0% 6 0 0% 8 1 13% 1 1 100%
Gallus gallus X52392 37 12 32% 37 17 46% 32 13 41% 13 2 15% 6 2 33% 8 6 75% 11 5 45% 5 0 0% 7 0 0% 2 0 0%
Glycine max M16859 59 28 47% 66 26 39% 48 10 21% 30 0 0% 28 6 21% 18 3 17% 14 5 36% 10 2 20% 10 3 30% 11 0 0%
Harpactes ardens U94810 27 10 37% 40 18 45% 29 15 52% 15 2 13% 7 3 43% 5 0 0% 11 5 45% 6 1 17% 6 0 0% 2 0 0%
Harpochytrium 94 AY182005 43 22 51% 74 33 45% 47 16 34% 16 8 50% 12 5 42% 7 7 100% 9 3 33% 7 4 57% 6 2 33% 8 3 38%
Herpetomonas megaseliae U01006 2 0 0% 2 0 0% 8 0 0% 6 3 50% 4 0 0% 2 0 0% 1 0 0% 0 0 0% 0 0 0% 0 0 0%
Homo sapiens J01415 43 21 49% 43 26 60% 26 3 12% 12 7 58% 6 5 83% 10 5 50% 7 0 0% 6 0 0% 9 0 0% 2 0 0%
Katharina tunicata U09810 28 3 11% 32 5 16% 24 1 4% 11 0 0% 8 0 0% 5 0 0% 4 0 0% 4 0 0% 6 0 0% 5 0 0%
Latimeria chalumnae Z21921 35 18 51% 36 23 64% 28 8 29% 11 2 18% 5 0 0% 8 0 0% 10 5 50% 6 0 0% 6 0 0% 4 2 50%
Leishmania tarentolae M10126 10 3 30% 10 5 50% 12 1 8% 8 3 38% 4 0 0% 2 0 0% 1 0 0% 0 0 0% 0 0 0% 0 0 0%
Locusta migratoria X80245 26 3 12% 36 5 14% 20 2 10% 14 0 0% 10 0 0% 5 0 0% 3 0 0% 8 0 0% 6 0 0% 5 0 0%
Loxodonta africana U60182 D50847 40 16 40% 40 14 35% 29 11 38% 12 3 25% 8 4 50% 10 6 60% 8 5 63% 6 0 0% 9 0 0% 1 0 0%
Lumbricus terrestris U24570 32 6 19% 31 10 32% 19 6 32% 8 0 0% 3 0 0% 7 0 0% 6 0 0% 4 0 0% 9 0 0% 1 0 0%
Lutreolina crassicaudata U33494 42 11 26% 46 14 30% 30 9 30% 11 5 45% 10 6 60% 6 1 17% 11 0 0% 5 0 0% 9 0 0% 0 0 0%
Macropus giganteus X86941 41 18 44% 41 16 39% 27 14 52% 12 4 33% 10 8 80% 6 1 17% 10 5 50% 5 0 0% 8 0 0% 2 0 0%
Magicicada tredecim NPA 30 6 20% 35 7 20% 22 4 18% 11 0 0% 8 0 0% 8 0 0% 3 0 0% 6 0 0% 1 0 0% 7 0 0%
Marchantia polymorpha M68292 54 33 61% 62 35 56% 42 19 45% 32 17 53% 25 19 76% 13 9 69% 15 8 53% 8 6 75% 6 2 33% 3 0 0%
Metridium senile S75445 42 20 48% 60 33 55% 46 25 54% 21 16 76% 15 11 73% 7 2 29% 10 0 0% 7 0 0% 4 0 0% 2 0 0%
Monosiga brevicollis AF538053 46 33 72% 62 44 71% 53 35 66% 40 25 63% 25 10 40% 14 3 21% 15 6 40% 8 3 38% 14 9 64% 8 2 25%
Mus musculus J01420 40 16 40% 38 21 55% 28 4 14% 11 5 45% 8 2 25% 9 6 67% 9 8 89% 6 2 33% 9 0 0% 1 0 0%
Muscardinus avellanarius X84384 38 19 50% 42 23 55% 26 14 54% 15 10 67% 9 4 44% 7 4 57% 10 1 10% 7 1 14% 6 1 17% 3 2 67%
Mytilus edulis M83756 29 11 38% 35 21 60% 25 4 16% 14 0 0% 11 0 0% 2 0 0% 5 0 0% 0 0 0% 3 0 0% 5 0 0%
Nephroselmis olivacea AF110138 64 43 67% 79 53 67% 57 35 61% 35 6 17% 25 11 44% 14 5 36% 13 4 31% 12 4 33% 14 9 64% 8 5 63%
Neurospora crassa L33367 40 14 35% 56 22 39% 40 17 43% 20 3 15% 17 3 18% 8 2 25% 5 0 0% 6 0 0% 13 0 0% 9 0 0%
Ochromonas danica AF287134 71 20 28% 84 26 31% 50 16 32% 36 12 33% 29 9 31% 18 7 39% 16 10 63% 7 3 43% 16 5 31% 13 5 38%
Oenothera berteriana X61277 59 23 39% 65 29 45% 49 16 33% 30 6 20% 27 2 7% 18 0 0% 13 0 0% 10 0 0% 10 0 0% 10 0 0%
Oncorhynchus mykiss L29771 39 17 44% 43 18 42% 32 11 34% 9 3 33% 9 4 44% 8 2 25% 9 0 0% 6 0 0% 6 0 0% 1 0 0%
Ornithorhynchus anatinus U33498 X83427 43 15 35% 40 17 43% 27 7 26% 9 3 33% 8 3 38% 8 2 25% 8 0 0% 5 0 0% 8 0 0% 2 0 0%
Pan troglodytes D38113 41 21 51% 45 17 38% 25 7 28% 11 2 18% 7 3 43% 10 0 0% 8 0 0% 7 0 0% 10 3 30% 1 1 100%
Paracentrotus lividus J04815 32 8 25% 37 24 65% 26 14 54% 13 1 8% 13 7 54% 7 6 86% 2 0 0% 8 4 50% 3 3 100% 7 2 29%
Paramecium tetraurelia K01751 48 6 13% 68 12 18% 40 9 23% 28 14 50% 21 1 5% 9 0 0% 6 0 0% 2 0 0% 5 0 0% 2 0 0%
Pedinomonas minor AF116775 56 20 36% 69 27 39% 37 15 41% 26 11 42% 16 6 38% 5 1 20% 13 5 38% 10 3 30% 13 0 0% 6 0 0%
Penicillium chrysogenum Z23072 49 27 55% 70 37 53% 41 18 44% 27 10 37% 25 17 68% 9 2 22% 7 0 0% 6 4 67% 9 1 11% 6 0 0%
Petromyzon marinus U11880 35 10 29% 40 16 40% 28 13 46% 8 0 0% 4 0 0% 4 2 50% 8 2 25% 4 0 0% 5 0 0% 1 0 0%
Phalanger orientalis U33496 39 11 28% 40 13 33% 30 13 43% 9 2 22% 11 8 73% 6 1 17% 11 0 0% 5 0 0% 8 0 0% 1 0 0%
Phascogale tapoatafa U33497 47 22 47% 46 23 50% 30 19 63% 11 3 27% 10 3 30% 6 0 0% 11 0 0% 5 0 0% 7 0 0% 3 0 0%
Phoca vitulina X63726 36 12 33% 42 21 50% 24 6 25% 15 7 47% 8 5 63% 7 2 29% 10 0 0% 5 2 40% 10 0 0% 1 0 0%
Physarum polycephalum X75592 59 25 42% 63 21 33% 42 6 14% 34 15 44% 26 2 8% 21 0 0% 13 0 0% 11 0 0% 7 0 0% 9 0 0%
Phytophthora infestans U17009 71 30 42% 72 40 56% 56 29 52% 34 24 71% 25 16 64% 15 13 87% 15 10 67% 11 5 45% 12 5 42% 11 9 82%
Pichia canadensis D49702 D31785 41 13 32% 55 27 49% 30 13 43% 22 6 27% 20 3 15% 11 7 64% 12 9 75% 14 6 43% 10 9 90% 6 6 100%
Podospora anserina X14734 53 20 38% 60 21 35% 40 15 38% 16 1 6% 15 4 27% 13 4 31% 10 2 20% 6 0 0% 9 0 0% 10 0 0%
Porphyra purpurea AF114794 59 30 51% 76 32 42% 47 15 32% 36 18 50% 23 7 30% 19 4 21% 12 7 58% 6 2 33% 7 5 71% 4 3 75%
Protopterus dolloi L42813 40 24 60% 43 21 49% 29 15 52% 10 6 60% 10 6 60% 9 0 0% 5 0 0% 6 0 0% 9 0 0% 2 0 0%
Prototheca wickerhamii X15435 70 51 73% 75 53 71% 65 34 52% 33 13 39% 28 17 61% 13 11 85% 8 5 63% 7 0 0% 9 6 67% 11 4 36%
Puma concolor U33495 36 17 47% 41 24 59% 27 8 30% 13 10 77% 8 4 50% 9 5 56% 10 5 50% 6 0 0% 8 2 25% 1 1 100%
Pylaiella littoralis X14874 53 28 53% 65 33 51% 39 8 21% 31 10 32% 19 7 37% 11 1 9% 15 0 0% 8 0 0% 11 0 0% 9 0 0%
Rana catesbeiana X12841 41 25 61% 40 24 60% 28 8 29% 11 6 55% 9 1 11% 7 0 0% 8 0 0% 6 0 0% 7 0 0% 2 0 0%
Rattus norvegicus J01438 39 12 31% 37 14 38% 27 7 26% 11 8 73% 10 5 50% 9 6 67% 9 7 78% 7 0 0% 6 0 0% 2 0 0%
Reclinomonas americana AF007261 70 45 64% 88 62 70% 60 48 80% 40 30 75% 26 19 73% 18 17 94% 16 13 81% 9 9 100% 6 6 100% 12 8 67%
Rhizopus stolonifer NPA 59 46 78% 76 42 55% 51 39 76% 29 16 55% 28 17 61% 15 13 87% 9 3 33% 4 0 0% 4 1 25% 5 5 100%
Rhodomonas salina AF288090 68 27 40% 68 30 44% 46 12 26% 35 4 11% 22 8 36% 17 2 12% 16 5 31% 11 5 45% 9 0 0% 9 2 22%
Saccharomyces cerevisiae V00704 61 27 44% 75 39 52% 44 19 43% 21 8 38% 14 4 29% 7 0 0% 11 0 0% 12 2 17% 16 9 56% 10 4 40%
Salmo salar U12143 41 24 59% 42 18 43% 30 10 33% 10 3 30% 7 2 29% 10 5 50% 6 1 17% 8 2 25% 6 2 33% 1 0 0%
Sceloporus undulatus L28075 26 14 54% 39 24 62% 29 18 62% 13 2 15% 12 8 67% 10 9 90% 6 3 50% 8 2 25% 7 2 29% 2 0 0%
Schizosaccharomyces pombe X15738 66 38 58% 83 51 61% 42 22 52% 24 7 29% 27 10 37% 10 3 30% 15 10 67% 8 4 50% 10 4 40% 6 3 50%
Scyliorhinus canicula Y16067 38 17 45% 42 24 57% 28 11 39% 11 6 55% 9 9 100% 8 1 13% 9 0 0% 5 0 0% 7 0 0% 7 0 0%
Secale cereale Z14059 60 22 37% 66 22 33% 48 10 21% 30 11 37% 27 6 22% 18 0 0% 13 0 0% 6 0 0% 6 0 0% 3 0 0%
Sphenodon punctatus L28076 29 7 24% 48 17 35% 29 11 38% 9 1 11% 11 10 91% 4 1 25% 3 0 0% 7 0 0% 6 0 0% 0 0 0%
Spizellomyces punctatus AF404303 51 25 49% 48 28 58% 45 21 47% 24 10 42% 16 10 63% 9 0 0% 14 0 0% 12 0 0% 12 0 0% 12 0 0%
Stenella coeruleoalba X78169 40 18 45% 40 20 50% 28 8 29% 11 0 0% 8 3 38% 8 4 50% 10 2 20% 7 0 0% 8 0 0% 2 0 0%
Suillus sinuspaulianus L47584 64 30 47% 85 30 35% 52 17 33% 33 13 39% 25 5 20% 21 9 43% 24 12 50% 13 7 54% 11 2 18% 14 6 43%
Tetrahymena pyriformis M12714 49 19 39% 59 25 42% 42 15 36% 38 3 8% 24 3 13% 9 2 22% 5 0 0% 6 0 0% 5 0 0% 4 1 25%
Trachemys scripta L28077 34 14 41% 39 15 38% 25 11 44% 7 0 0% 6 3 50% 7 4 57% 12 2 17% 5 0 0% 7 0 0% 1 0 0%
Triticum aestivum Z14078 60 22 37% 66 22 33% 48 10 21% 30 11 37% 27 6 22% 18 0 0% 13 0 0% 6 0 0% 6 0 0% 7 0 0%
Trypanosoma brucei X02547 9 0 0% 13 0 0% 12 0 0% 9 3 33% 4 0 0% 2 0 0% 1 0 0% 0 0 0% 0 0 0% 0 0 0%
Williopsis saturnus var. mrakii X71392 41 15 37% 59 33 56% 29 15 52% 17 3 18% 16 7 44% 15 9 60% 17 9 53% 15 8 53% 14 10 71% 6 5 83%
Xenopus laevis M27605 37 21 57% 43 24 56% 31 16 52% 10 5 50% 8 5 63% 8 4 50% 9 4 44% 5 0 0% 7 0 0% 3 3 100%
Zea mays X00794 60 31 52% 70 32 46% 51 21 41% 35 13 37% 23 0 0% 16 6 38% 18 11 61% 6 2 33% 6 4 67% 7 2 29%
Eukaryotic Nuclear   2-10 11-20 21-30 31-40 41-50 51-60 61-70 71-80 81-90 91-100
C1 P A C P A C P A C P A C P A C P A C P A C P A C P A C P A
Acanthamoeba castellanii U07413 63 31 49% 94 46 49% 57 18 32% 42 11 26% 26 11 42% 12 7 58% 14 1 7% 9 3 33% 9 3 33% 16 5 31%
Agmasoma penaei NPA 46 21 46% 62 35 56% 43 16 37% 28 13 46% 14 11 79% 6 0 0% 9 4 44% 3 2 67% 2 0 0% 8 5 63%
Ahnfeltia plicata Z14139 71 39 55% 96 59 61% 58 35 60% 45 20 44% 27 13 48% 9 7 78% 9 3 33% 7 4 57% 11 3 27% 5 2 40%
Alexandrium fundyense U09048 61 25 41% 84 32 38% 45 12 27% 32 7 22% 23 2 9% 14 5 36% 8 0 0% 7 0 0% 10 0 0% 7 0 0%
Amblyospora sp. U68474 60 25 42% 75 36 48% 47 13 28% 34 8 24% 18 7 39% 13 6 46% 12 0 0% 6 0 0% 7 0 0% 5 0 0%
Ameson michaelis L15741 61 13 21% 67 21 31% 34 6 18% 31 4 13% 15 0 0% 5 0 0% 12 3 25% 7 3 43% 8 0 0% 11 0 0%
Androctonus australis X77908 68 31 46% 89 44 49% 58 25 43% 39 12 31% 22 4 18% 14 4 29% 9 6 67% 8 5 63% 11 7 64% 6 2 33%
Antonospora scoticae AF024655 65 29 45% 75 31 41% 34 8 24% 32 5 16% 20 0 0% 8 0 0% 11 0 0% 5 0 0% 9 0 0% 6 0 0%
Artemia salina X01723 64 22 34% 92 48 52% 62 24 39% 38 13 34% 25 6 24% 11 7 64% 8 3 38% 7 4 57% 10 1 10% 6 0 0%
Audouinella dasyae L26181 71 46 65% 97 59 61% 60 33 55% 44 15 34% 28 16 57% 9 7 78% 9 3 33% 6 4 67% 12 3 25% 5 2 40%
Audouinella hermannii AF026040 71 49 69% 97 68 70% 59 31 53% 44 13 30% 29 12 41% 9 5 56% 9 3 33% 6 4 67% 12 3 25% 6 3 50%
Aulacoseira ambigua X85404 68 18 26% 92 34 37% 56 16 29% 36 10 28% 27 8 30% 19 6 32% 12 1 8% 10 0 0% 13 4 31% 8 0 0%
Babesia bigemina X59604 66 22 33% 75 28 37% 47 12 26% 41 5 12% 20 2 10% 11 0 0% 9 3 33% 9 1 11% 10 2 20% 7 0 0%
Bacillidium sp. AF104087 58 18 31% 70 15 21% 35 15 43% 27 19 70% 26 17 65% 11 5 45% 10 8 80% 10 6 60% 7 1 14% 7 3 43%
Balamuthia mandrillaris AF019071 66 35 53% 93 44 47% 45 15 33% 39 10 26% 19 4 21% 20 10 50% 14 9 64% 6 3 50% 12 6 50% 12 6 50%
Balbiania investiens AF132294 64 39 61% 89 47 53% 56 34 61% 46 14 30% 27 9 33% 11 8 73% 9 3 33% 6 4 67% 12 3 25% 6 3 50%
Bangia sp. (Northwest Territories/NWT) AF043355 65 28 43% 98 41 42% 53 18 34% 44 11 25% 28 3 11% 15 5 33% 13 6 46% 6 4 67% 13 8 62% 6 2 33%
Bangiopsis subsimplex AF168627 67 31 46% 93 55 59% 56 25 45% 46 17 37% 29 10 34% 12 9 75% 9 3 33% 6 4 67% 12 3 25% 5 2 40%
Batrachospermum gelatinosum AF026045 69 38 55% 95 42 44% 62 34 55% 42 10 24% 29 7 24% 8 6 75% 9 3 33% 7 5 71% 11 2 18% 7 4 57%
Batrachospermum macrosporum AF026048 70 41 59% 96 48 50% 59 29 49% 40 9 23% 30 9 30% 8 0 0% 9 3 33% 7 1 14% 11 2 18% 7 0 0%
Bonnemaisonia hamifera L26182 70 40 57% 94 44 47% 54 28 52% 47 19 40% 28 14 50% 11 6 55% 9 3 33% 7 5 71% 10 2 20% 7 3 43%
Bostrychia moritziana AF203893 66 38 58% 100 56 56% 55 21 38% 48 13 27% 25 13 52% 15 8 53% 8 3 38% 6 3 50% 7 4 57% 11 2 18%
Candida albicans M60302 70 38 54% 97 52 54% 60 33 55% 43 18 42% 28 13 46% 12 11 92% 9 7 78% 9 7 78% 11 5 45% 6 3 50%
Ceramium rubrum L26183 75 41 55% 94 43 46% 54 21 39% 46 12 26% 28 16 57% 11 7 64% 9 3 33% 7 5 71% 11 2 18% 7 4 57%
Chlorella luteoviridis X73998 66 31 47% 93 47 51% 58 30 52% 42 15 36% 32 19 59% 12 4 33% 9 0 0% 7 1 14% 11 3 27% 6 0 0%
Chondrus crispus Z14140 75 47 63% 93 57 61% 55 31 56% 47 21 45% 28 19 68% 11 6 55% 9 3 33% 7 5 71% 10 5 50% 7 4 57%
Compsopogon coeruleus AF087124 66 34 52% 93 43 46% 53 21 40% 40 5 13% 25 7 28% 14 5 36% 10 1 10% 7 0 0% 11 0 0% 5 0 0%
Corallina officinalis L26184 72 38 53% 100 60 60% 55 17 31% 48 13 27% 29 12 41% 12 8 67% 9 3 33% 7 5 71% 10 2 20% 7 3 43%
Crossodonthina koreana Z36893 67 30 45% 91 41 45% 55 27 49% 42 14 33% 24 4 17% 13 2 15% 8 6 75% 7 5 71% 10 6 60% 5 0 0%
Cryptocercus punctulatus NPA 64 31 48% 92 46 50% 57 18 32% 42 7 17% 22 9 41% 19 7 37% 12 2 17% 7 4 57% 9 5 56% 9 2 22%
Cryptococcus neoformans var. neoformans L05428 69 42 61% 95 60 63% 57 38 67% 46 20 43% 31 21 68% 14 10 71% 10 7 70% 9 7 78% 11 5 45% 6 3 50%
Culicosporella lunata AF027683 67 32 48% 83 41 49% 40 23 58% 31 17 55% 25 8 32% 12 6 50% 16 15 94% 2 1 50% 5 3 60% 3 0 0%
Cyanophora paradoxa X68483 70 44 63% 97 61 63% 61 32 52% 42 19 45% 29 10 34% 15 4 27% 9 3 33% 6 1 17% 12 0 0% 5 0 0%
Cymatosira belgica X85387 69 31 45% 92 36 39% 60 28 47% 42 19 45% 30 10 33% 15 7 47% 10 1 10% 8 0 0% 8 0 0% 4 0 0%
Cyrtohymena citrina AF164135 68 39 57% 103 45 44% 51 14 27% 43 14 33% 30 12 40% 12 8 67% 11 8 73% 6 3 50% 10 8 80% 6 3 50%
Dixonielloa grisea L26187 70 38 54% 99 44 44% 52 22 42% 41 12 29% 30 13 43% 13 5 38% 9 2 22% 7 1 14% 10 4 40% 6 3 50%
Drosophila melanogaster M21017 67 35 52% 90 47 52% 61 27 44% 42 17 40% 23 7 30% 17 9 53% 9 6 67% 6 4 67% 8 7 88% 6 1 17%
Echinococcus granulosus U27015 54 20 37% 74 32 43% 48 14 29% 35 7 20% 21 12 57% 7 5 71% 13 5 38% 11 2 18% 12 0 0% 11 0 0%
Edhazardia aedis AF027684 60 24 40% 74 33 45% 38 18 47% 32 9 28% 23 5 22% 10 4 40% 19 10 53% 8 5 63% 10 2 20% 11 0 0%
Encephalitozoon cuniculi X98467 66 21 32% 75 33 44% 43 6 14% 28 4 14% 18 4 22% 10 4 40% 8 1 13% 9 0 0% 7 0 0% 7 0 0%
Encephalitozoon hellem AF118143 65 21 32% 76 25 33% 45 6 13% 28 4 14% 14 2 14% 7 4 57% 8 3 38% 7 2 29% 7 0 0% 11 0 0%
Encephalitozoon sp. L16867 62 20 32% 72 22 31% 41 14 34% 28 7 25% 17 4 24% 6 0 0% 10 3 30% 8 2 25% 10 0 0% 7 0 0%
Endoreticulatus schubergi L39109 56 21 38% 76 31 41% 40 16 40% 29 13 45% 20 5 25% 8 4 50% 10 1 10% 7 0 0% 8 0 0% 7 0 0%
Engelmanniella mobilis AF164134 67 40 60% 103 57 55% 51 23 45% 44 15 34% 29 10 34% 12 11 92% 11 8 73% 7 4 57% 8 6 75% 8 5 63%
Enterocytozoonidae gen. sp. AF201911 54 27 50% 71 36 51% 45 22 49% 21 15 71% 21 6 29% 10 0 0% 9 5 56% 6 1 17% 6 5 83% 7 7 100%
Erythrotrichia carnea L26189 71 40 56% 97 52 54% 62 37 60% 44 18 41% 31 19 61% 12 4 33% 9 0 0% 7 0 0% 11 0 0% 5 0 0%
Euglypha rotunda X77692 68 38 56% 86 51 59% 63 36 57% 42 17 40% 33 19 58% 17 11 65% 9 6 67% 9 8 89% 10 8 80% 6 3 50%
Euplotes aediculatus M14590 69 26 38% 96 36 38% 55 13 24% 38 10 26% 30 7 23% 11 0 0% 10 4 40% 9 7 78% 10 0 0% 3 2 67%
Flabelliforma montana AJ252962 49 17 35% 64 28 44% 29 5 17% 28 10 36% 19 1 5% 2 0 0% 4 0 0% 6 0 0% 6 0 0% 6 0 0%
Fragaria x ananassa X15590 65 28 43% 95 43 45% 61 24 39% 45 13 29% 29 7 24% 9 1 11% 9 6 67% 8 5 63% 11 7 64% 6 2 33%
Gastrostyla steinei AF164133 67 31 46% 103 45 44% 51 22 43% 43 15 35% 30 11 37% 12 8 67% 11 8 73% 6 3 50% 9 7 78% 7 4 57%
Gelidium vagum L26190 72 40 56% 93 48 52% 56 31 55% 46 13 28% 29 14 48% 10 6 60% 9 3 33% 7 5 71% 10 2 20% 7 3 43%
Genicularia spirotaenia X74753 66 33 50% 93 46 49% 55 28 51% 45 12 27% 33 12 36% 13 8 62% 9 6 67% 7 4 57% 12 7 58% 6 2 33%
Giardia ardeae Z17210 63 31 49% 74 45 61% 32 13 41% 22 3 14% 30 12 40% 11 4 36% 5 2 40% 7 5 71% 10 0 0% 7 0 0%
Giardia intestinalis X52949 57 21 37% 78 25 32% 36 9 25% 26 4 15% 29 5 17% 7 0 0% 8 4 50% 5 3 60% 6 0 0% 7 0 0%
Giardia muris X65063 57 22 39% 71 33 46% 33 9 27% 25 6 24% 29 12 41% 10 3 30% 6 6 100% 7 6 86% 9 0 0% 9 2 22%
Glaucocystis nostochinearum X70803 68 36 53% 98 51 52% 57 26 46% 43 16 37% 26 10 38% 18 5 28% 10 3 30% 7 1 14% 12 2 17% 6 0 0%
Gloeochaete wittrockiana X81901 67 25 37% 97 46 47% 59 25 42% 42 22 52% 31 10 32% 14 9 64% 9 3 33% 9 4 44% 11 4 36% 5 2 40%
Glomus intraradices X58725 65 36 55% 88 49 56% 52 27 52% 36 15 42% 28 12 43% 10 7 70% 12 8 67% 10 6 60% 10 4 40% 7 4 57%
Glugea atherinae U15987 59 33 56% 61 35 57% 47 20 43% 32 13 41% 16 5 31% 8 7 88% 7 7 100% 6 4 67% 9 8 89% 7 3 43%
Glugea stephani AF056015 52 30 58% 57 30 53% 44 23 52% 31 18 58% 16 8 50% 8 7 88% 7 6 86% 4 2 50% 4 3 75% 5 3 60%
Gracilariopsis sp. M33639 70 45 64% 95 59 62% 56 27 48% 49 19 39% 26 15 58% 13 8 62% 9 3 33% 6 4 67% 9 3 33% 9 3 33%
Halymenia plana U33133 72 33 46% 95 38 40% 56 30 54% 46 14 30% 28 13 46% 11 7 64% 9 3 33% 6 4 67% 11 3 27% 7 3 43%
Hexamita sp. Z17224 55 25 45% 71 31 44% 40 12 30% 28 13 46% 22 8 36% 10 4 40% 9 5 56% 5 2 40% 13 5 38% 8 0 0%
Hildenbrandia rubra L19345 74 40 54% 95 54 57% 57 30 53% 48 18 38% 27 12 44% 11 3 27% 9 0 0% 7 0 0% 11 0 0% 6 0 0%
Homo sapiens K03432 70 28 40% 101 42 42% 60 32 53% 47 13 28% 28 8 29% 17 5 29% 11 3 27% 12 4 33% 11 5 45% 7 1 14%
Ichthyosporidium sp. L39110 55 20 36% 65 23 35% 42 17 40% 29 10 34% 20 11 55% 2 2 100% 8 4 50% 6 2 33% 10 5 50% 7 0 0%
Janacekia debaisieuxi AJ252950 62 29 47% 74 24 32% 39 20 51% 30 19 63% 21 13 62% 9 3 33% 11 7 64% 5 4 80% 7 0 0% 6 0 0%
Lecanora dispersa NPA 57 19 33% 87 24 28% 48 10 21% 38 10 26% 27 5 19% 10 5 50% 7 4 57% 5 2 40% 6 2 33% 3 0 0%
Lilioceris lilii NPA 67 39 58% 87 49 56% 59 33 56% 47 21 45% 22 13 59% 19 16 84% 14 8 57% 7 5 71% 8 8 100% 9 4 44%
Loma acerinae AJ252951 61 33 54% 65 28 43% 47 20 43% 32 12 38% 15 6 40% 8 3 38% 7 6 86% 8 2 25% 8 4 50% 7 3 43%
Mastigamoeba balamuthi L23799 67 43 64% 91 54 59% 55 32 58% 48 25 52% 28 16 57% 13 11 85% 19 8 42% 12 8 67% 9 3 33% 8 5 63%
Microgemma sp. AJ252952 63 39 62% 61 36 59% 47 26 55% 28 14 50% 19 9 47% 8 0 0% 7 0 0% 5 1 20% 7 4 57% 5 0 0%
Microsporidium 57864 U90885 66 17 26% 70 23 33% 42 15 36% 30 13 43% 20 11 55% 8 0 0% 13 5 38% 6 3 50% 4 3 75% 9 0 0%
Mus musculus X00686 67 27 40% 98 43 44% 55 31 56% 47 14 30% 28 12 43% 17 9 53% 10 3 30% 11 4 36% 12 5 42% 7 2 29%
Mytilus edulis L24489 64 34 53% 95 55 58% 53 32 60% 44 16 36% 27 10 37% 17 9 53% 10 7 70% 8 5 63% 10 6 60% 6 2 33%
Naegleria gruberi Thesis, Mullican J. 64 17 27% 76 19 25% 46 3 7% 33 0 0% 21 4 19% 6 5 83% 12 2 17% 11 0 0% 9 3 33% 12 5 42%
Nemalion helminthoides L26196 73 50 68% 95 66 69% 57 28 49% 45 16 36% 29 12 41% 10 7 70% 9 3 33% 6 4 67% 12 3 25% 6 3 50%
Nemalionopsis shawii AF506272 70 38 54% 96 50 52% 53 22 42% 42 9 21% 26 14 54% 11 6 55% 14 5 36% 8 2 25% 8 0 0% 6 0 0%
Nosema algerae AF069063 68 32 47% 83 47 57% 46 14 30% 33 7 21% 23 6 26% 12 3 25% 12 5 42% 7 0 0% 8 0 0% 5 0 0%
Nosema apis U97150 63 18 29% 68 25 37% 42 12 29% 28 18 64% 19 8 42% 9 2 22% 13 10 77% 5 2 40% 4 0 0% 8 1 13%
Nosema necatrix U11051 55 12 22% 59 17 29% 38 12 32% 28 15 54% 21 10 48% 7 0 0% 12 5 42% 9 3 33% 4 0 0% 7 3 43%
Okanagana utahensis U06478 70 33 47% 97 58 60% 59 30 51% 42 11 26% 21 8 38% 22 10 45% 18 10 56% 7 6 86% 9 8 89% 8 2 25%
Onychodromus quadricornutus X53485 67 23 34% 102 38 37% 51 13 25% 43 10 23% 30 8 27% 12 8 67% 11 8 73% 6 3 50% 9 5 56% 7 4 57%
Ophiopholis aculeata L28056 55 25 45% 84 31 37% 53 20 38% 37 6 16% 21 4 19% 14 9 64% 11 4 36% 7 5 71% 9 3 33% 4 2 50%
Oxytricha granulifera AF164122 65 33 51% 102 45 44% 52 18 35% 43 13 30% 29 10 34% 12 8 67% 11 8 73% 7 4 57% 8 2 25% 8 0 0%
Oxytricha longa AF164125 67 39 58% 103 57 55% 51 21 41% 43 15 35% 30 11 37% 12 11 92% 11 8 73% 6 3 50% 9 7 78% 7 4 57%
Palmaria palmata Z14142 71 49 69% 96 64 67% 59 32 54% 45 16 36% 29 17 59% 9 6 67% 9 3 33% 6 4 67% 11 3 27% 6 3 50%
Paraurostyla weissei AF164127 67 40 60% 103 57 55% 51 23 45% 43 15 35% 30 11 37% 12 8 67% 11 8 73% 6 3 50% 9 7 78% 7 4 57%
Paruroleptus lepisma AF164132 66 35 53% 102 50 49% 51 18 35% 44 11 25% 29 7 24% 12 8 67% 11 8 73% 7 2 29% 8 4 50% 8 5 63%
Paulinella chromatophora X81811 66 29 44% 93 45 48% 61 27 44% 42 16 38% 32 17 53% 15 8 53% 11 9 82% 8 6 75% 10 8 80% 6 3 50%
Placopecten magellanicus X53899 63 32 51% 94 38 40% 53 23 43% 43 15 35% 28 6 21% 14 5 36% 9 3 33% 10 2 20% 8 2 25% 7 0 0%
Plasmodium falciparum (A gene) M19172 74 47 64% 90 57 63% 60 27 45% 46 17 37% 26 10 38% 9 9 100% 14 13 93% 10 8 80% 15 8 53% 15 9 60%
Plasmodium falciparum (S gene) M19173 64 35 55% 88 44 50% 54 16 30% 51 13 25% 20 4 20% 10 4 40% 15 6 40% 13 6 46% 17 12 71% 12 4 33%
Plasmodium vivax (A gene) U07367 70 44 63% 91 48 53% 59 29 49% 35 9 26% 21 10 48% 10 10 100% 16 10 63% 14 11 79% 15 13 87% 15 9 60%
Plasmodium vivax (O gene) U93095 59 23 39% 88 24 27% 59 18 31% 35 9 26% 27 12 44% 11 5 45% 12 8 67% 14 11 79% 13 11 85% 13 8 62%
Plasmodium vivax (S gene) U07368 67 34 51% 90 51 57% 65 32 49% 33 8 24% 26 10 38% 11 7 64% 15 4 27% 14 5 36% 16 10 63% 12 6 50%
Pleistophora hippoglossoideos AJ252953 60 30 50% 68 30 44% 49 17 35% 29 6 21% 20 9 45% 10 0 0% 8 0 0% 5 0 0% 10 0 0% 5 0 0%
Pleistophora sp. U10342 51 25 49% 70 33 47% 37 17 46% 30 12 40% 18 4 22% 8 4 50% 10 1 10% 7 1 14% 5 2 40% 8 3 38%
Pleurotricha lanceolota AF164128 66 28 42% 103 41 40% 51 13 25% 43 10 23% 30 8 27% 12 8 67% 11 8 73% 6 3 50% 9 5 56% 7 4 57%
Plocamiocolax pulvinata U09618 75 35 47% 96 38 40% 58 25 43% 47 12 26% 28 16 57% 10 8 80% 9 3 33% 7 5 71% 11 2 18% 6 3 50%
Polydispyrenia simulii AJ252960 54 23 43% 77 42 55% 35 11 31% 28 10 36% 19 3 16% 2 0 0% 5 0 0% 6 0 0% 6 0 0% 6 0 0%
Porphyra miniata NF AF175540 61 22 36% 96 35 36% 54 14 26% 45 7 16% 26 3 12% 18 3 17% 13 3 23% 6 3 50% 13 5 38% 6 2 33%
Porphyridium aerugineum L27635 70 38 54% 96 45 47% 55 16 29% 42 15 36% 33 15 45% 9 7 78% 9 6 67% 8 7 88% 9 3 33% 7 4 57%
Reticulitermes flavipes NPA 65 39 60% 100 67 67% 60 32 53% 46 14 30% 20 8 40% 23 13 57% 10 3 30% 7 4 57% 9 5 56% 7 1 14%
Rhodella maculata U21217 63 32 51% 94 45 48% 57 24 42% 47 11 23% 27 8 30% 11 7 64% 9 5 56% 7 5 71% 12 6 50% 5 2 40%
Rhodochaete parvula AF139462 69 33 48% 92 46 50% 60 32 53% 45 20 44% 31 14 45% 11 4 36% 9 3 33% 7 1 14% 11 0 0% 5 0 0%
Rhodogorgon carriebowensis AF006089 70 44 63% 100 54 54% 56 24 43% 45 10 22% 26 7 27% 16 7 44% 14 3 21% 11 9 82% 13 8 62% 9 3 33%
Rhodymenia leptophylla U09621 73 37 51% 95 48 51% 57 37 65% 46 15 33% 28 15 54% 11 7 64% 9 3 33% 6 4 67% 11 3 27% 7 3 43%
Saccharomyces cerevisiae U53879 69 35 51% 98 53 54% 58 25 43% 47 25 53% 29 17 59% 11 8 73% 9 6 67% 9 7 78% 11 5 45% 6 2 33%
Spraguea lophii AF033197 60 25 42% 63 29 46% 46 14 30% 27 12 44% 21 2 10% 7 0 0% 6 4 67% 4 2 50% 7 5 71% 7 7 100%
Staurastrum sp. M752 X74752 68 33 49% 92 41 45% 52 26 50% 45 14 31% 32 17 53% 12 6 50% 9 5 56% 6 4 67% 13 7 54% 5 1 20%
Strongylocentrotus purpuratus L28055 56 32 57% 85 44 52% 54 22 41% 38 11 29% 17 3 18% 13 4 31% 12 3 25% 9 5 56% 6 3 50% 6 0 0%
Stylonychia lemnae AF164124 67 36 54% 104 43 41% 51 14 27% 43 14 33% 30 11 37% 12 8 67% 11 8 73% 6 3 50% 9 7 78% 7 4 57%
Stylonychia mytilus AF164123 67 36 54% 103 53 51% 51 20 39% 43 9 21% 30 8 27% 12 8 67% 11 8 73% 6 3 50% 9 7 78% 7 4 57%
Thalassiosira eccentrica X85396 68 38 56% 91 47 52% 62 27 44% 41 17 41% 29 9 31% 15 8 53% 10 4 40% 7 5 71% 12 2 17% 7 4 57%
Thelohania solenopsae AF031538 64 20 31% 77 22 29% 48 16 33% 32 10 31% 21 4 19% 11 3 27% 10 5 50% 9 1 11% 9 0 0% 6 0 0%
Thelohania sp. AF031537 54 24 44% 50 22 44% 32 12 38% 25 7 28% 19 2 11% 6 0 0% 5 0 0% 7 0 0% 5 0 0% 4 0 0%
Thorea hispida AF506273 70 35 50% 93 50 54% 55 27 49% 38 10 26% 26 7 27% 16 10 63% 14 3 21% 7 4 57% 8 3 38% 7 3 43%
Thorea violacea AF026042 76 40 53% 108 53 49% 59 27 46% 40 11 28% 26 7 27% 15 8 53% 15 8 53% 10 4 40% 8 3 38% 10 4 40%
Thorea violacea AF506274 70 37 53% 92 59 64% 55 31 56% 39 15 38% 26 14 54% 15 12 80% 14 8 57% 8 5 63% 8 3 38% 6 3 50%
Toxoplasma gondii (P) X75453 67 33 49% 89 53 60% 51 21 41% 33 9 27% 23 9 39% 13 8 62% 10 7 70% 7 5 71% 10 4 40% 7 4 57%
Trachipleistophora hominis AJ002605 61 30 49% 69 38 55% 49 22 45% 29 17 59% 20 7 35% 5 3 60% 7 2 29% 7 0 0% 7 0 0% 5 0 0%
Tritrichomonas foetus M81842 70 33 47% 82 43 52% 50 21 42% 33 19 58% 20 11 55% 13 8 62% 7 2 29% 10 5 50% 7 0 0% 5 0 0%
Uroleptus gallina AF164130 66 41 62% 102 57 56% 51 23 45% 44 15 34% 30 11 37% 12 8 67% 11 8 73% 7 4 57% 8 6 75% 8 5 63%
Uroleptus pisces AF164131 68 41 60% 101 62 61% 51 22 43% 44 15 34% 29 10 34% 12 8 67% 11 8 73% 7 2 29% 8 4 50% 8 5 63%
Urostyla grandis AF164129 67 35 52% 101 56 55% 51 22 43% 41 15 37% 30 11 37% 12 8 67% 11 8 73% 7 1 14% 9 6 67% 6 3 50%
Vairimorpha necatrix Y00266 M24612 65 15 23% 67 22 33% 39 14 36% 23 13 57% 21 10 48% 7 0 0% 13 5 38% 7 2 29% 4 0 0% 6 3 50%
Vairimorpha sp. Argentina AF031539 47 24 51% 62 24 39% 36 12 33% 28 5 18% 26 7 27% 9 5 56% 12 1 8% 2 0 0% 3 0 0% 3 0 0%
Vavraia culicis AJ252961 60 34 57% 66 36 55% 48 24 50% 29 15 52% 20 8 40% 8 3 38% 7 7 100% 6 2 33% 9 5 56% 5 3 60%
Visvesvaria acridophagus AF024658 67 34 51% 81 50 62% 50 19 38% 36 14 39% 22 10 45% 11 8 73% 10 9 90% 9 4 44% 8 3 38% 8 5 63%
Weiseria palustris AF132544 62 33 53% 78 39 50% 42 17 40% 34 8 24% 22 5 23% 11 5 45% 6 6 100% 9 1 11% 5 1 20% 6 0 0%
Xenopus laevis X04025 67 21 31% 95 42 44% 52 19 37% 47 16 34% 20 9 45% 18 9 50% 10 4 40% 7 4 57% 10 5 50% 6 2 33%
  1. C, Number of comparative, canonical base-pairs (G-C,C-G,A-U,U-A,G-U,U-G); P, Number of base-pairs predicted in the MFold 3.1 optimal structure prediction that match comparative, canonical base-pairs; A, Accuracy of base-pair predictions in the MFold 3.1 optimal structure prediction, accuracy is calculated by dividing the number of correctly predicted Mfold base pairs by the number of canoncial, comparative base pairs within the RNA Contact Distance category.
  2. NPA, Not Publically Available - The sequence used for analysis has not been deposited in Genbank.