Nuclear SSU rRNA:

Organism Accession Number
Arxula terrestris AB000663
Audouinella arcuata AF079786
Bangia fuscopurpurea AF342745
Batrachospermum gelatinosum AF026045
Beauveria bassiana AB079125
Bensingtonia sakaguchii AB001746
Bensingtonia yamatoana AF101826
Compsopogon coeruleus AF342748
Cordyceps capitata AB027318
Cordyceps coccidiicola AB031195
Cordyceps inegoensis AB027322
Cordyceps kanzashiana AB027325
Cryphonectria parasitica L42441
Cryphonectria radicalis L42442
Dendryphiopsis atra AF053731
Graphiola phoenicis D63928
Graphium penicillioides AB007681
Hildenbrandia rubra AF076995
Hildenbrandia rubra (AK1) AF108399
Hildenbrandia rubra (CA1) AF108401
Hildenbrandia rubra (CT1) AF108408
Hildenbrandia rubra (MA1) AF108409
Hildenbrandia rubra (NS1) AF108412
Hildenbrandia rubra (BC2) to be submitted
Homo sapiens M10098
Nadsoniella nigra X91896
Nectria ochroleuca AB012952
Oryza sativa X00755
Oxytricha nova M14601
Plasmodiophora brassicae U18981
Porphyra spiralis var. amplifolia L26177
Rhodella maculata U21217
Rhodochaete parvula AF139462
Scenedesmus costatus AB037090
Scytalidium dimidiatum AF258604
Stichococcus bacillaris AB055864
Tilletiopsis flava AB045703
Trichocoma paradoxa AB003944
Xenopus laevis X04025
Xylaria polymorpha AB014043
Zea mays K02202

IC1 introns:

Phylogenetic Group Organism Intron Position Accession Number
Chlorophyta: Stichococcus bacillaris SSU 1506 AB055864
Fungi: Arthrobotrys cladodes SSU 1506 U51945
Beauveria bassiana SSU 943 AB079125
Bensingtonia yamatoana SSU 1506 AF101826
Bionectria ochroleuca SSU 943 AB012952
Cenococcum geophilum SSU 1506 Z48521
Cordyceps coccidiicola SSU 943 AB031195
Cordyceps kanzashiana LSU 2563 AB044639
Cordyceps prolifica LSU 1921 AB044640
Graphium penicillioides SSU 943 AB007681
Metarhizium anisopliae LSU 1921 AF197122
LSU 2449 AF197124
Tilletiopsis flava SSU 1506 AB045703
Venturia inaequalis SSU 1506 AF065831
Xylaria polymorpha SSU 943 AB014043
Rhodophyta: Bangia fuscopurpurea SSU 1506 AF342745
Hildenbrandia rubra (1) SSU 1506 L19345
Hildenbrandia rubra (2) SSU 1506 AF076995
Hildenbrandia rubra (AK1) SSU 1506 AY571898
Hildenbrandia rubra (CA1) SSU 1506 AY571897
Hildenbrandia rubra (CT1) SSU 1506 AY571896
Hildenbrandia rubra (MA1) SSU 1506 AY571894
Hildenbrandia rubra (NF1) SSU 1506 AY571899
Hildenbrandia rubra (NS1) SSU 1506 AY571895
Porphyra spiralis var. amplifolia SSU 1506 L26177

IE introns:

Phylogenetic Group Organism Intron Position Accession Number
Chlorophyta: Stichococcus bacillaris SSU 516 AB055864
Fungi: Beauveria bassiana SSU 1199 AB079125
Bensingtonia sakaguchii SSU 1199 AB001746
Bionectria ochroleuca SSU 1199 AB012952
Candida albicans LSU 1923 X74272
Candida dubliniensis LSU 1923 AF405231
Cordyceps capitata SSU 516 AB027318
Cordyceps coccidiicola SSU 989 AB031195
Cordyceps inegoensis SSU 1199 AB027322
Cordyceps prolifica LSU 2066 AB044640
Cryphonectria parasitica SSU 1199 L42441
Cryptendoxyla hypophloia SSU 989 AF015912
Exophiala nigra SSU 989 X91897
Fusarium solani f. robiniae SSU 1199 AF150489
Gaeumannomyces graminis LSU 2563 U17160
Metarhizium anisopliae LSU 2066 AF197121
Roccella canariensis SSU 516 AF110343
Rotaliella elatiana LSU 1926 X78521
Scytalidium dimidiatum SSU 1199 AF258604
Tilletiopsis flava SSU 516 AB045703
Trichocoma paradoxa SSU 516 AB003944
Xylaria polymorpha SSU 989 AB014043
Rhodophyta: Hildenbrandia rubra (BC2) SSU 989 AY571893
stramenopiles: Skeletonema pseudocostatum LSU 1926 Y11512
Plasmodiophorida: Plasmodiophora brassicae SSU 516 U18981