Alignment Name Organism/Phylogenetic Group AccNum
E.coli.ref Escherichia coli (Reference) J01695
mask (Mask Sequence) -----
(2)-crown Eukaryote crown group -----
(3)-Rhodop Rhodophyta -----
(4)-Bangio Bangiophyceae -----
(5)-Bangia Bangiales -----
Ban.fuscop Bangia fuscopurpurea AF342745
Por.leuc.2 Porphyra leucosticta (Baltic) AF342746
Ban.atro.1 Bangia atropurpurea L36066
Ban.sp.AK Bangia sp. (Alaska/AK) AF043355
Ban.sp.GLD Bangia sp. (Greenland/GLD) AF043355
Ban.sp.NH Bangia sp. (New Hampshire/NH) AF043353
Ban.sp.NWT Bangia sp. (Northwest Territories/NWT) AF043355
Ban.sp.RI Bangia sp. (Rhode Island/RI) AF043354
Ban.sp.BI12 Bangia sp. (England River Thames/BI12) AF043365
Ban.sp.GL Bangia sp. (Great Lakes/GL) AF043365
Ban.sp.IRF Bangia sp. (Ireland freshwater/IRF) AF043365
Ban.sp.ITF Bangia sp. (Italy freshwater/ITF) AF043365
Ban.sp.SIM Bangia sp. (Lake Simcoe/SIM) AF043365
Ban.sp.BC1 Bangia sp. (Northern British Columbia/BC1) AF043360
Ban.atro.2 Bangia atropurpurea D88387
Ban.sp.BC2 Bangia sp. (Victoria/BC2) AF043359
Ban.sp.CA Bangia sp. (California/CA) AF043356
Ban.sp.TX Bangia sp. (Texas/TX) AF043361
Ban.sp.NF Bangia sp. (Newfoundland/NF) AF043357
Ban.sp.OR Bangia sp. (Oregon/OR) AF043358
Ban.sp.MA Bangia sp. (Massachusetts/MA) AF043362
Ban.sp.NC Bangia sp. (North Carolina/NC) AF043363
Ban.sp.VIS Bangia sp. (Virgin Islands/VIS7) AF043364
Por.umbi.1 Porphyra umbilicalis X53500
Por.spir.R Porphyra spiralis var. amplifolia L26177
Por.sub.pk Porphyra suborbiculata AF117239
Por.umb.HF Porphyra umbilicalis High Form L26202
Por.den.KF Porphyra dentata AB013183
Por.sp.SY Porphyra sp. AB013182
Por.ampl.2 Porphyra amplissima L36048
Por.hait.2 Porphyra haitanensis AB015795
Por.hai.YE Porphyra haitanensis AB013181
P.SSR053.1 Porphyra sp. AF136427
Por.kat.KY Porphyra katadae AB013184
Por.kunied Porphyra kuniedai AF123051
Por.leucos Porphyra leucosticta clone 9 L26199
Por.miniat Porphyra miniata L26200
Por.onoi Porphyra onoi AB015794
P.pselin.1 Porphyra pseudolinearis AB015793
P.pseli.TT Porphyra pseudolinearis AB013185
P.pselin.2 Porphyra pseudolinearis AF116913
Por.yez.OM Porphyra yezoensis AB013178
P.BRU107.2 Porphyra sp. AF136429
P.GRB108.2 Porphyra sp. AF136430
P.LGD018.2 Porphyra sp. AF136434
P.LGD030.2 Porphyra sp. AF136432
P.PAP052.2 Porphyra sp. AF136435
P.RAK049.1 Porphyra sp. AF136425
P.RAK049.2 Porphyra sp. AF136437
P.ROS054.2 Porphyra sp. AF136438
P.SSR053.2 Porphyra sp. AF136439
P.SSR091.2 Porphyra sp. AF136440
P.GRB146 Porphyra sp. AF136431
P.LGD161 Porphyra sp. AF136433
Por.lill.2 Porphyra lilliputiana AF136436
Por.sp.SHH Porphyra sp. AB017077
Por.spir.B Porphyra spiralis B L26175
Por.spir.D Porphyra spiralis D L26176
Por.ten.K4 Porphyra tenera AB029881
Por.ten.K5 Porphyra tenera AB029882
Por.ten.KK Porphyra tenera AB013176
Por.ten.M3 Porphyra tenera AB029883
Por.ten.M4 Porphyra tenera AB029884
Por.ten.SK Porphyra tenera AB013175
Por.ten.S2 Porphyra tenera AB029879
Por.ten.S3 Porphyra tenera AB029880
Por.ten.T1 Porphyra tenera strain T-1 D86237
Por.te.TU3 Porphyra tenera strain TU-3 D86236
Por.ten.T8 Porphyra tenera strain T8 AB000964
Por.tenuip Porphyra tenuipedalis AB015797
Por.yezoen Porphyra yezoensis D79976
Por.yez.HH Porphyra yezoensis AB013177
Por.ampl.3 Porphyra amplissima AB015791
Por.varieg Porphyra variegata AB015792
Por.subo.2 Porphyra suborbiculata AB015796
Por.caroli Porphyra carolinensis AF133792
Porphy.sp. Porphyra sp. AF117306
Por.lill.1 Porphyra lilliputiana AF136424
Por.sub.KY Porphyra suborbiculata AB013180
P.GRB108.1 Porphyra sp. AF136420
P.LGD030.1 Porphyra sp. AF136422
Por.pur.Av Porphyra purpurea (Avonport, NS) L26201
P.PAP052.1 Porphyra sp. AF136423
Por.umb.NM Porphyra umbilicalis AB013179
Por.umb.We Porphyra umbilicalis, isolate "Westport" L36049
P.LGD018.1 Porphyra sp. AF136421
Por.acanth Porphyra acanthophora var. acanthophora L26197
P.SSR091.1 Porphyra sp. AF136428
P.BRU107.1 Porphyra sp. AF136419
P.ROS054.1 Porphyra sp. AF136426
P.yez.OG1 Porphyra yezoensis OG-1 AB017078
P.yez.OG4 Porphyra yezoensis AB017081
P.yez.nara Porphyra yezoensis narawaensis cv. F6-1 AB017083
P.yez.NA2 Porphyra yezoensis NA-2 AB017075
P.yez.NA4 Porphyra yezoensis NA-4 AB017076
(5)-Porphy Porphyridiales -----
D.grisea Dixonielloa grisea L26187
Por.aerugi Porphyridum aerugineum L27635
Rho.macula Rhodella maculata U21217
Sty.alsidi Stylonema alsidii L26204
(5)-Compso Compsopogonales -----
Com.lept.2 Compsopogonopsis leptoclados AF087125
Com.lept.1 Compsopogonopsis leptoclados AF087123
Com.coer.1 Compsopogon coeruleus AF087124
Com.coer.2 Compsopogon coeruleus AF087127
Com.coer.3 Compsopogon coeruleus AF087128
Bol.erythr Boldia erythrosiphon AF055299
Smi.naia.2 Smithora naiadum AF087129
Smi.naia.1 Smithora naiadum AF087126
Rho.parvul Rhodochaete parvula AF139462
(5)-Erythr Erythropeltidales -----
Erythr.sp. Erythrocladia sp. L26188
E.carnea Erythrotrichia carnea L26189
(4)-Florid Florideophyceae -----
(5)-Acroch Acrochaetiales -----
Aud.arcuat Audouinella arcuata AF079786
Aud.amphir Audouinella amphiroae AF079785
Aud.aspara Audouinella asparagopsis AF079795
Aud.caespi Audouinella caespitosa AF079787
Aud.dasyae Audouinella dasyae L26181
Aud.davies Audouinella daviesii AF079788
Aud.endoph Audouinella endophytica AF079789
Aud.pectin Audouinella pectinata AF079790
Aud.proska Audouinella proskaueri AF079791
Aud.rhizoi Audouinella rhizoidea AF079792
Aud.secund Audouinella secundata AF079784
Aud.tenue Audouinella tenue AF079796
Aud.tetras Audouinella tetraspora AF079793
Aud.herman Audouinella hermannii AF026040
Aud.macr.1 Audouinella macrospora AF199505
Aud.macr.2 Audouinella macrospora AF199506
Chantr.sp. Chantransia sp. AF199507
Cam.oxycla Camontagnea oxyclada AF079794
Rho.purpur Rhodochorton purpureum U23816
(5)-Ahnfel Ahnfeltiales -----
Ahn.plicat Ahnfeltia plicata Z14139
(5)-Balbia Balbianiales -----
Rho.oregon Rhododraparnaldia oregonica AF026043
(5)-Batrac Batrachospermales -----
Bat.gelati Batrachospermum gelatinosum AF026045
Bat.boryan Batrachospermum boryanum AF026044
Bat.helmin Batrachospermum helminthosum AF026046
Bat.louisi Batrachospermum louisianae AF026047
Bat.macros Batrachospermum macrosporum AF026048
Bat.turfos Batrachospermum turfosum AF026049
Bat.virgat Batrachospermum virgato-decaisneanum AF026050
Lem.fluvia Lemanea fluviatilis AF026051
Par.catena Paralemanea catenata AF026052
Psi.scopar Psilosiphon scoparium AF026041
Not.nodosu Nothocladus nodosus U23815
Sir.huille Sirodotia huillensis AF026054
Sir.suecic Sirodotia suecica AF026053
Tho.violac Thorea violacea AF026042
Tuo.americ Tuomeya americana AF026055
(5)-Bonnem Bonnemaisoniales -----
Bon.hamife Bonnemaisonia hamifera L26182
(5)-Cerami Ceramiales -----
Len.muelle Lenormandia muelleri AF203897
Mic.strobi Micropeuce strobiliferum AF203896
Len.prolif Lenormandia prolifera AF203895
Lau.filifo Laurencia filiformis AF203894
Bos.moritz Bostrychia moritziana AF203893
Het.umbell Heterocladia umbellata AF203892
Het.caudat Heterocladia caudata AF203891
Het.austra Heterocladia australis AF203890
Mel.mamill Melanamansia mamillaris AF203889
Son.linear Sonderella linearis AF203888
Mur.pericl Murrayella periclados AF203887
Pol.lanosa Polysiphonia lanosa AF203886
Neo.savati Neosiphonia savatieri AF203885
Pti.serrat Ptilota serrata AF203884
Ano.furcel Anotrichium furcellatum U32561
Cer.macile Ceramium macilentum U32562
Cer.rubrum Ceramium rubrum L26183
Cro.attenu Crouania attenuata U32563
Dev.rament Devaleraea ramentacea L26186
Das.baillo Dasya baillouviana L26185
Gri.globif Griffithsia globulifera L26192
Gri.monili Griffithsia monilis U32565
Phy.rubens Phycodrys rubens L26198
Neu.fraxin Neurymenia fraxinifolia AF107042
Rho.confer Rhodomela confervoides L26203
(5)-Corall Coralliniales -----
Amp.sp.PtA Amphiroa sp. (Pt. Alfred, South Africa) U62116
Amp.sp.PtL Amphiroa sp. (Pt. Lonsdale, Victoria, Australia) U62115
Amp.fragil Amphiroa fragilissima U60744
Bos.califo Bossiella californica U60945
Art.filicu Arthrocardia filicula U61258
Cal.cheilo Calliarthron cheilosporioides U60943
Cal.tuberc Calliarthron tuberculosum U60944
Bos.orbign Bossiella orbigniana U60746
Ser.macmil Serraticardia macmillanii U62114
Hal.roseum Haliptilon roseum U60947
Che.sagitt Cheilosporum sagittatum U60745
Cor.offici Corallina officinalis L26184
Jan.crassa Jania crassa U62113
Cor.elonga Corallina elongata U60946
Lit.asperg Lithothrix aspergillum U61249
Jan.rubens Jania rubens U61259
Mas.canali Mastophoropsis canaliculata U62118
Cla.parcum Clathromorphum parcum U61252
Lit.glacia Lithothamnion glaciale U60738
Lit.tophif Lithothamnion tophiforme U60739
Cla.compac Clathromorphum compactum U60742
Lep.ferox Leptophytum ferox U62120
Lep.acerva Leptophytum acervatum U62119
Syn.patena Synarthrophyton patena U61255
Mes.erubes Mesophyllum erubescens U61257
Met.radiat Metagoniolithon radiatum U61250
Met.stelli Metagoniolithon stelliferum U61251
Hey.woelke Heydrichia woelkerlingii U61253
Lep.foveat Leptophytum foveatum AF031470
Lit.kotsch Lithophyllum kotschyanum U62117
Mes.engelh Mesophyllum engelhartii U61256
Met.chara Metagoniolithon chara U60743
Phy.laevig Phymatolithon laevigatum U60740
Phy.lenorm Phymatolithon lenormandii U60741
Spo.yendoi Spongites yendoi U60948
Spor.durum Sporolithon durum U61254
(5)-Gelidi Gelidiales -----
Gel.ligula Gelidiella ligulata AB017669
Gel.divari Gelidium divaricatum AB017662
Gel.elegan Gelidium elegans AB017670
O.sp.No103 Onikusa sp. No103 AB017668
Yat.hirsut Yatabella hirsuta AB017666
Gel.pusi.4 Gelidium pusillum AB017663
Oni.japoni Onikusa japonicum AB017667
Pte.capi.4 Pterocladiella capillacea AB017672
Aca.japo.1 Acanthopeltis japonica AB017664
Aca.japo.2 Acanthopeltis japonica AB017665
Cap.implex Capreolia implexa U60344
Gel.aceros Gelidiella acerosa U60342
Gel.americ Gelidium americanum U60347
Gel.caulac Gelidium caulacantheum U60343
Gel.florid Gelidium floridanum U60351
Gel.lati.1 Gelidium latifolium Y11953
Gel.lati.2 Gelidium latifolium U60350
Gel.pusi.1 Gelidium pusillum U32564
Gel.pusi.2 Gelidium pusillum U60352
Gel.pusi.3 Gelidium pusillum U60355
Gel.serrul Gelidium serrulatum U60340
Gel.sesq.1 Gelidium sesquipedale Y11959
Gel.sesq.2 Gelidium sesquipedale U60354
Gel.vagu.1 Gelidium vagum L26190
Gel.vagu.2 Gelidium vagum AB017671
Oni.pristo Onikusa pristoides U60353
Pte.luci.1 Pterocladia lucida Y11958
Pte.luci.2 Pterocladia lucida U60349
Pte.capi.1 Pterocladiella capillacea Y11957
Pte.capi.2 Pterocladiella capillacea Y11960
Pte.capi.3 Pterocladiella capillacea U60346
Pte.melano Pterocladiella melanoidea U60341
Pti.pinnat Ptilophora pinnatifida U60345
Pti.subcos Ptilophora subcostata U60348
(5)-Gigart Gigartinales -----
Are.conges Areschougia congesta U09613
(6)-Dumont Dumontiaceae -----
Das.insign Dasyphloea insignis U09614
Dil.califo Dilsea californica U33126
Far.mollis Farlowia mollis U33129
(6)-Endocl Endocladiaceae -----
End.murica Endocladia muricata U33127
Gle.furcat Gleiopeltis furcata U33130
Car.phyllo Carpopeltis phyllophora U33124
Cal.rangif Callophyllis rangiferina U33123
Cho.crispu Chondrus crispus Z14140
Cry.undula Cryptonemia undulata U33125
Epy.wilson Epymenia wilsonis U33128
Euc.dentic Eucheuma denticulata U25439
Euc.isifor Eucheuma isiforme U25438
Fur.lumbri Furcellaria lumbricalis Z14141
Gar.tuberi Gardneriella tuberifera U43554
Sar.crassi Sarcothalia crassifolia U09615
Glo.frutic Gloioderma fruticulosa U33131
Kap.alvare Kappaphycus alvarezii U25437
Mas.stella Mastocarpus stellatus L26195
Myc.carnos Mychodea carnosa U33135
Niz.austra Nizymenia australis U09616
Pha.pepero Phacelocarpus peperocarpos U09617
Sar.furcat Sarcodiotheca furcata U43553
Sar.gaud.1 Sarcodiotheca gaudichaudii U43550
Sar.gaud.2 Sarcodiotheca gaudichaudii U33062
Schi.dubyi Schizymenia dubyi U33136
Sch.nicaee Schottera nicaeensis U33137
Seb.flabel Sebdenia flabellata U33138
Sph.corono Sphaerococcus coronopifolius U09622
(5)-Gracil Gracilariales -----
(6)-Gracil Gracilariaceae -----
Cur.flabel Curdiea flabellata L26207
Gra.chilen Gracilaria chilensis L26217
Gra.cornea Gracilaria cornea L26212
Gra.gra.Ar Gracilaria gracilis (Argentina) L26205
Gra.gra.F3 Gracilaria gracilis (France-3) L26210
Gra.gra.F5 Gracilaria gracilis (France-5) L26211
Gra.gra.J1 Gracilaria gracilis (Japan-1) L26213
Gracil.sp. Gracilaria sp. L26216
Gra.gra.No Gracilaria gracilis (isolate Norway) M33638
Gra.gra.Wa Gracilaria gracilis (Wales) L26218
Gra.lema.1 Gracilaria lemaneiformis X54263
Gra.lema.2 Gracilaria lemaneiformis (VI) L26214
Gra.pacifi Gracilaria pacifica L26206
Gra.tikvah Gracilaria tikvahiae McLachlan M33640
Gra.gra.gr Gracilaria gracilis L26180
Gra.gra.mo Gracilaria gracilis L26179
Graci.NC.2 Gracilariopsis sp. L26178
Graci.Dors Gracilariopsis sp. Dorset L26208
Graci.Eng1 Gracilariopsis sp. England-1 M33639
Graci.Eng2 Gracilariopsis sp. England-2 L26209
Graci.NC.1 Gracilariopsis sp. L26256
Gra.oryz.1 Gracilariophila oryzoides U43555
Gra.oryz.2 Gracilariophila oryzoides U43556
Gra.oryz.3 Gracilariophila oryzoides U43557
Mel.obtusa Melanthalia obtusata L26215
(5)-Halyme Halymeniales -----
(6)-Halyme Halymeniaceae -----
Gra.fili.1 Grateloupia filicina L26191
Gra.fili.2 Grateloupia filicina U33132
Haly.plana Halymenia plana U33133
(5)-Hilden Hildenbrandiales -----
(6)-Hilden Hildenbrandiaceae -----
Apo.lyalli Apophlaea lyallii AF076996
Hil.rub.01 Hildenbrandia rubra L19345
Hil.rub.02 Hildenbrandia rubra AF076995
Hil.rub.03 Hildenbrandia rubra AF108399
Hil.rub.04 Hildenbrandia rubra AF108400
Hil.rub.05 Hildenbrandia rubra AF108401
Hil.rub.06 Hildenbrandia rubra AF108406
Hil.rub.07 Hildenbrandia rubra AF108408
Hil.rub.08 Hildenbrandia rubra AF108409
Hil.rub.09 Hildenbrandia rubra AF108410
Hil.rub.10 Hildenbrandia rubra AF108411
Hil.rub.11 Hildenbrandia rubra AF108412
Hil.rub.12 Hildenbrandia rubra AF108413
Hil.rub.13 Hildenbrandia rubra AF108414
Hil.rub.14 Hildenbrandia rubra AF208819
Hil.rub.15 Hildenbrandia rubra AF208820
Hil.rub.16 Hildenbrandia rubra AF208821
Hil.rub.17 Hildenbrandia rubra AF208826
Hil.rub.18 Hildenbrandia rubra AF208828
Hil.rub.19 Hildenbrandia rubra AF208831
Hil.ango.1 Hildenbrandia angolensis AF108404
Hil.ango.2 Hildenbrandia angolensis AF108415
Hil.ango.3 Hildenbrandia angolensis AF108416
Hil.ango.4 Hildenbrandia angolensis AF108417
Hil.ango.5 Hildenbrandia angolensis AF108418
Hil.occide Hildenbrandia occidentalis AF108402
Hil.riv.01 Hildenbrandia rivularis AF208816
Hil.riv.02 Hildenbrandia rivularis AF208817
Hil.riv.03 Hildenbrandia rivularis AF208818
Hil.riv.04 Hildenbrandia rivularis AF208822
Hil.riv.05 Hildenbrandia rivularis AF208823
Hil.riv.06 Hildenbrandia rivularis AF208824
Hil.riv.07 Hildenbrandia rivularis AF208825
Hil.riv.08 Hildenbrandia rivularis AF208827
Hil.riv.09 Hildenbrandia rivularis AF208829
Hil.riv.10 Hildenbrandia rivularis AF208830
(5)-Nemali Nemaliales -----
(6)-Galaxa Galaxauraceae -----
Gal.margin Galaxaura marginata AF006090
(6)-Liagor Liagoraceae -----
Nem.helmin Nemalion helminthoides L26196
(5)-Palmar Palmariales -----
Hal.glandi Halosaccion glandiforme L26193
Mei.spetsb Meiodiscus spetsbergensis U23814
Pal.palmat Palmaria palmata Z14142
Rho.elegan Rhodophysema elegans U23817
Rho.florid Rhodothamniella floridula U23818
(5)-Plocam Plocamiales -----
Plo.cart.1 Plocamium cartilagineum U09619
Plo.cart.2 Plocamium cartilagineum U43551
Plo.pulv.1 Plocamiocolax pulvinata U09618
Plo.pulv.2 Plocamiocolax pulvinata U43552
(5)-Rhodog Rhodogorgonales -----
Rho.carrie Rhodogorgon carriebowensis AF006089
(5)-Rhodym Rhodymeniales -----
(6)-Champi Champiaceae -----
Cha.affini Champia affinis U23951
Chy.vertic Chylocladia verticillata AF085263
Dic.saltat Dictyothamnion saltatum AF085264
Gas.ovatum Gastroclonium ovatum AF085265
Cep.leucob Cephalocystis leucobotrys U23950
(6)-Erythr Erythrymenia -----
Ery.minuta Erythrymenia minuta AF085272
(6)-Fauche Faucheaceae -----
Fau.lacini Fauchea laciniata AF085266
Fau.repens Fauchea repens AF085267
Fau.corona Faucheopsis coronata AF085268
Web.splach Webervanbossea splachnoides AF085269
(6)-Fryeel Fryeella -----
Fry.gardne Fryeella gardneri AF085273
(6)-Loment Lomentariaceae -----
Gel.variab Gelidiopsis variabilis AF085270
Lom.bailey Lomentaria baileyana L26194
Lom.austra Lomentaria australis U33134
Sem.minuta Semnocarpa minuta AF085271
(6)-Rhodym Rhodymeniaceae -----
Ast.peltat Asteromenia peltata AF085253
Bot.ebrios Botryocladia ebriosa AF085255
Bot.sonder Botryocladia sonderi AF085256
Cep.furcel Cephalocystis furcellata U23949
Chr.ornata Chrysymenia ornata AF085257
Coe.opunti Coelarthrum opuntia AF085258
Cor.erecta Cordylecladia erecta U23952
Ery.podagr Erythrocolon podagricum U23953
Glo.browni Gloiosaccion brownii AF085259
Hym.crusti Hymenocladiopsis crustigena AF085274
Irv.ardrea Irvinea ardreana AF085254
Lept.rosea Leptosomia rosea AF085260
Rho.leptop Rhodymenia leptophylla U09621
Rho.stenog Rhodymenia stenoglossa AF085262
Spa.pertus Sparlingia pertusa AF085261
(3)-strame stramenopiles -----
(4)-Bacill Bacillariophyta -----
Act.curvat Actinocyclus curvatulus X85401
Bac.paxill Bacillaria paxillifer M87325
Cyl.closte Cylindrotheca closterium M87326
Cha.didymu Chaetoceros didymus X85392
Cha.rostra Chaetoceros rostratus X85391
Chaeto.sp. Chaetoceros sp. X85390
Cor.crioph Corethron criophilum X85400
Dit.bright Ditylum brightwelli X85386
Euc.antarc Eucampia antarctica X85389
Lau.boreal Lauderia borealis X85399
Nit.apicul Nitzschia apiculata M87334
Mel.varian Melosira varians X85402
Pap.elegan Papiliocellulus elegans X85388
Por.glacia Porosira glacialis X85398
Pn.multis Pseudo-nitzschia multiseries U18241
Pn.pungens Pseudo-nitzschia pungens U18240
Aul.ambigu Aulacoseira ambigua X85404
Aul.distan Aulacoseira distans X85403
Cos.radiat Coscinodiscus radiatus X77705
Ste.brosch Stephanopyxis broschii M87330
Cym.belgic Cymatosira belgica X85387
Rhi.setige Rhizosolenia setigera M87329
Ske.cost.1 Skeletonema costatum X85395
Ske.cost.2 Skeletonema costatum X52006
Ske.pseu.1 Skeletonema pseudocostatum X85393
Ske.pseu.2 Skeletonema pseudocostatum X85394
Str.thames Streptotheca thamesis X85385
Tha.eccent Thalassiosira eccentrica X85396
Tha.rotula Thalassiosira rotula X85397
Ast.glacia Asterionellopsis glacilia X77701
Fra.striat Fragilaria striatula X77704
Rha.belgic Rhaphoneis belgicae X77703
Tha.nitzsc Thalassionema nitzschioides X77702
(4)-Bicoso Bicosoecida -----
Caf.roenbe Cafeteria roenbergensis L27633
(4)-Chryso Chrysophyceae -----
Chr.chromo Chromulina chromophila M87332
Hib.magna Hibberdia magna M87331
Och.danica Ochromonas danica M32704
Par.vestit Paraphysomonas vestita Z28335
Mal.papill Mallomonas papillosa M55285
Mal.striat Mallomonas striata M87333
Syn.spinos Synura spinosa M87336
(4)-Dictyo Dictyochophyceae -----
Dic.specul Dictyocha speculum U14385
Ape.radian Apedinella radians U14384
Cil.infusi Ciliophrys infusionum L37205
Pse.elasti Pseudopedinella elastica U14387
Pte.danica Pteridomonas danica L37204
Rhi.marina Rhizochromulina cf. marina U14388
(4)-Eustig Eustigmatophyceae -----
Eust.magna Eustigmatos magna U41051
Mon.subter Monodopsis subterranea U41054
Na.CCMP505 Nannochloropsis CCMP505 U41050
Na.CCMP531 Nannochloropsis CCMP531 U41094
Nan.gadi.1 Nannochloropsis gaditana AF045036
Nan.gadi.2 Nannochloropsis gaditana AF045037
Nan.gadi.3 Nannochloropsis gaditana AF045038
Nan.gadi.4 Nannochloropsis gaditana AF045039
Nan.gadi.5 Nannochloropsis gaditana AF045040
Nan.gadi.6 Nannochloropsis gaditana AF067957
Nan.gran.1 Nannochloropsis granulata AF045041
Nan.gran.2 Nannochloropsis granulata AF045042
Nan.gran.3 Nannochloropsis granulata AF045043
Nan.gran.4 Nannochloropsis granulata U41092
Nan.limnet Nannochloropsis limnetica AF251496
Nan.ocul.1 Nannochloropsis oculata AF045044
Nan.ocul.2 Nannochloropsis oculata AF045045
Nan.sali.1 Nannochloropsis salina M87328
Nan.sali.2 Nannochloropsis salina AF045046
Nan.sali.3 Nannochloropsis salina AF045047
Nan.sali.4 Nannochloropsis salina AF045048
Nan.sali.5 Nannochloropsis salina AF045049
Nan.sali.6 Nannochloropsis salina AF045050
Nan.sali.7 Nannochloropsis salina U41093
Nanno.sp.1 Nannochloropsis sp. CCAP211/46 AF045034
Nanno.sp.2 Nannochloropsis sp. CCAP211/78 AF045035
Nanno.sp.3 Nannochloropsis sp. strain IOLR AF067956
Pse.minuta Pseudocharaciopsis minuta U41052
Vis.helvet Vischeria helvetica AF045051
(4)-Hyphoc Hyphochytriomycetes -----
Hyp.cateno Hyphochytrium catenoides X80344
(4)-Labyri Labyrinthulida -----
Lab.sp.Nak Labyrinthula sp. AN-1565 AB022105
Apl.kergue Aplanochytrium kerguelense AB022103
Lab.minuta Labyrinthuloides minuta L27634
Sch.minutu Schizochytrium minutum AB022108
Thr.multir Thraustochytrium multirudimentale AB022111
Thr.aggreg Thraustochytrium aggregatum AB022109
Thr.pachyd Thraustochytrium pachydermum AB022113
Sch.aggreg Schizochytrium aggregatum AB022106
Thr.aureum Thraustochytrium aureum AB022110
Sch.limaci Schizochytrium limacinum AB022107
Thr.striat Thraustochytrium striatum AB022112
Lab.haliot Labyrinthuloides haliotidis U21338
Japono.sp. Japonochytrium sp. ATCC 28207 AB022104
par.QPX.1 labyrinthulid quahog parasite QPX AF261664
par.QPX.2 labyrinthulid quahog parasite QPX AF155209
Ulkeni.sp. Ulkenia sp. HUBOL-1 AB019134
Ulk.prof.1 Ulkenia profunda L34054
Ulk.prof.2 Ulkenia profunda AB022114
Ulk.radiat Ulkenia radiata AB022115
Ulk.visurg Ulkenia visurgensis AB022116
Thr.kinnei Thraustochytrium kinnei L34668
Thr.sp.BS1 Thraustochytriidae sp. BS1 AF257314
Thr.sp.BS2 Thraustochytriidae sp. BS2 AF257315
Thr.sp.7-5 Thraustochytriidae sp. 7-5 AF257316
Thr.sp.8-7 Thraustochytriidae sp. 8-7 AF257317
(4)-Oomyce Oomycetes -----
Lag.gigant Lagenidium giganteum X54266
Phy.megasp Phytophthora megasperma X54265
Pyt.insidi Pythium insidiosum AF289981
Pyt.monosp Pythium monospermum AJ238653
Phy.undula Phytophthora undulata AJ238654
Apo.brachy Apodachlya brachynema AJ238663
Sap.ferax Saprolegnia ferax AJ238655
Pyt.cymosa Pythiopsis cymosa AJ238657
Apl.terres Aplanopsis terrestris AJ238658
Lep.caudat Leptolegnia caudata AJ238659
Lep.chap.1 Leptolegnia chapmanii AJ238660
Lep.chap.2 Leptolegnia chapmanii AJ238661
Leptol.sp. Leptolegnia sp. AJ238662
Ach.apicul Achlya apiculata AJ238656
Ach.bisexu Achlya bisexualis M32705
(4)-Pelago Pelagophyceae -----
Aur.anop.1 Aureococcus anophagefferens U40257
Aur.anop.2 Aureococcus anophagefferens AF117776
Aur.anop.3 Aureococcus anophagefferens AF117777
Aur.anop.4 Aureococcus anophagefferens AF117778
Aur.anop.5 Aureococcus anophagefferens AF117779
Aur.anop.6 Aureococcus anophagefferens AF118443
Aur.anop.7 Aureococcus anophagefferens AF119119
Aur.lagune Aureoumbra lagunensis U40258
Cocc.pel.1 Coccoid pelagophyte CCMP1410 U40926
Cocc.pel.2 Coccoid pelagophyte CCMP1395 U40927
Cocc.pel.3 Coccoid pelagophyte CCMP1145 U40928
Pel.subvir Pelagococcus subviridis U14386
Pel.calceo Pelagomonas calceolata U14389
Pulvin.sp. Pulvinaria sp. CCMP 292 U78032
Sar.marina Sarcinochrysis marina U78033
(4)-Phaeop Phaeophyceae/Xanthophyceae group -----
Aga.clathr Agarum clathratum AF123576
Ala.fistul Alaria fistulosa AF123578
Ana.japoni Analipus japonicus L17009
Asp.bullos Asperococcus bullosus L17013
Cho.filum Chorda filum AF123585
Cho.toment Chorda tomentosa L43056
Col.peregr Colpomenia peregrina L17014
Cos.cost.1 Costaria costata X53229
Cos.cost.2 Costaria costata M97958
Des.ligu.1 Desmarestia ligulata L17018
Des.ligu.2 Desmarestia ligulata L43060
Eck.cava Ecklonia cava AF123579
Ect.sili.1 Ectocarpus siliculosus L17015
Ect.sili.2 Ectocarpus siliculosus L43062
Egr.menzie Egregia menziesii AF123580
Ela.fucico Elachista fucicola L17011
Fuc.distic Fucus distichus M97959
Fuc.gardne Fucus gardneri X53987
Hap.anders Haplogloia andersonii L17012
Kje.crassi Kjellmaniella crassifolia AF123577
Lam.japoni Laminaria japonica AF123575
Lea.diffor Leathesia difformis L16915
Lesson.sp. Lessonia sp. strain Ilo AF123581
Pos.palmae Postelsia palmaeformis AF123582
Pse.gracil Pseudochorda gracilis AF123583
Pse.nagaii Pseudochorda nagaii AF123584
Pun.expans Punctaria expansa L17010
Ral.fungif Ralfsia fungiformis L17019
Sac.polysc Saccorhiza polyschides L43059
Sph.furcig Sphacelaria furcigera L17020
Spo.comosu Sporochnus comosus L43061
Scy.lome.1 Scytosiphon lomentaria D16558
Scy.lome.2 Scytosiphon lomentaria L43066
Scy.lome.3 Scytosiphon lomentaria L17016
Syr.phinne Syringoderma phinneyi L17017
Tao.atomar Taonia atomaria L17021
Tri.aequal Tribonema aequale M55286
(4)-Raphid Raphidophyceae -----
Het.akashi Heterosigma akashiwo AB001287
(4)-Blasto Blastocystis -----
Bla.homi.1 Blastocystis hominis AB023499
Bla.homi.2 Blastocystis hominis AB023578
Bla.homi.3 Blastocystis hominis U51151
Blasto.sp. Blastocystis sp. U51152